Clone Name | rbasd19m16 |
---|---|
Clone Library Name | barley_pub |
>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 393 Score = 295 bits (756), Expect = 6e-80 Identities = 147/157 (93%), Positives = 151/157 (96%), Gaps = 2/157 (1%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AINGSAFSTIHVTPEDGFSYASYEVQGMDASAL YGDIVKRVLRCFGPSEFSVAVTIFGG Sbjct: 239 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAVTIFGG 298 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGE 288 RGHAATWGKKLDAEAYDCNN+VEQELPCGGVLIYQSF ANEE+AVSAGSPRSVFHCF E Sbjct: 299 RGHAATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHCF--E 356 Query: 287 NVESGHPLVKEGKLANLLAWRAEEDSLEE--GAVLCE 183 NVESGHPLVKEGKLANLLAWRAEE+SLEE GA+LCE Sbjct: 357 NVESGHPLVKEGKLANLLAWRAEEESLEEGTGALLCE 393
>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 400 Score = 230 bits (586), Expect = 3e-60 Identities = 114/152 (75%), Positives = 128/152 (84%), Gaps = 1/152 (0%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AI+GSAFSTIHVTPEDGFSYASYEV G+DA+AL YGD+VKRVLRCFGPSEFSVAVTIFGG Sbjct: 246 AIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAVTIFGG 305 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGE 288 RGHA TWGK L AE YDCNN+VEQELP GG+L+YQSF A E+ A SP+SVFHCF+GE Sbjct: 306 RGHAGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAV--ATSPKSVFHCFDGE 363 Query: 287 NVESG-HPLVKEGKLANLLAWRAEEDSLEEGA 195 NVES P+ K+ KLANLL W E D++EE A Sbjct: 364 NVESAPPPMKKDYKLANLLCWEEEADAMEEKA 395
>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 398 Score = 229 bits (584), Expect = 5e-60 Identities = 113/149 (75%), Positives = 126/149 (84%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AI+GSAFSTIHVTPEDGFSYASYEV G DAS L YGD+VKRVLRCFGPSEFSVAVTIFGG Sbjct: 246 AIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAVTIFGG 305 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGE 288 GHA TW K+L+A+AY CNN+VEQELPCGG+LIYQSF A E+V V+ GSP+SV HCFE E Sbjct: 306 HGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHCFEAE 365 Query: 287 NVESGHPLVKEGKLANLLAWRAEEDSLEE 201 N+ + P VKEGKL NLL W ED+LEE Sbjct: 366 NMVNPAP-VKEGKLGNLLPW--GEDALEE 391
>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 96.3 bits (238), Expect = 7e-20 Identities = 53/123 (43%), Positives = 70/123 (56%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 ++ G A STIH+TPEDGFSYAS+E G D A+ ++V RVL CF P+EFSVAV + Sbjct: 235 SVEGPAVSTIHITPEDGFSYASFETAGYDLKAMNLNEMVMRVLACFQPTEFSVAVHV-DN 293 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGE 288 + G LD + Y C+ Q L G ++YQ F A GSPRS C++ E Sbjct: 294 ASKSFEQGCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVK----ASDCGSPRSTLKCWKDE 349 Query: 287 NVE 279 + E Sbjct: 350 DEE 352
>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 353 Score = 95.9 bits (237), Expect = 9e-20 Identities = 53/123 (43%), Positives = 69/123 (56%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 ++ GSA STIH+TPEDGFSYAS+E G D A+ ++V RVL CF P+EFSVAV + Sbjct: 235 SVEGSAVSTIHITPEDGFSYASFETAGYDLKAINLNEMVMRVLACFQPTEFSVAVHV-DN 293 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHCFEGE 288 + G LD + Y C Q L G ++YQ F GSPRS C++ E Sbjct: 294 ASKSFEQGCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTS----YCGSPRSTLKCWKDE 349 Query: 287 NVE 279 + E Sbjct: 350 DEE 352
>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 88.6 bits (218), Expect = 1e-17 Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 6/127 (4%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 A+ G STIHVTPEDGFSYAS+E G D + +++RVL CF P+EFSVA+ Sbjct: 237 AVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVAL----- 291 Query: 467 RGHAATWGKKLDA------EAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 306 H + G+KLD+ + Y C + L GG ++Y FT+ S GSPRS Sbjct: 292 --HCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFTSTG----SCGSPRSTL 345 Query: 305 HCFEGEN 285 C EN Sbjct: 346 LCCWSEN 352
>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 87.4 bits (215), Expect = 3e-17 Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 6/127 (4%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 A+ G A S IHVTPEDGFSYAS+E G D + +++RVL CF P+EFSVA+ Sbjct: 237 AVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVAL----- 291 Query: 467 RGHAATWGKKLDA------EAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 306 H + G+KLD+ + Y C + L GG ++Y FT+ S GSPRS Sbjct: 292 --HCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFTSTG----SCGSPRSTL 345 Query: 305 HCFEGEN 285 C EN Sbjct: 346 LCCWSEN 352
>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 357 Score = 87.0 bits (214), Expect = 4e-17 Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 6/122 (4%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I +A STIHVTPEDGFSYAS+E G D A G +++RVL CF PSEFSVAV Sbjct: 237 SIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAV----- 291 Query: 467 RGHAATWGK------KLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 306 H K L+ + Y + + +EL GG +IY+ F + + GSPRS+ Sbjct: 292 --HCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRID----ACGSPRSIL 345 Query: 305 HC 300 C Sbjct: 346 KC 347
>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 84.0 bits (206), Expect = 4e-16 Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 6/119 (5%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I G+A STIH+TPEDGFSYAS+E G D + G +V+RVL CF P EFS+A+ Sbjct: 239 SIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIAL----- 293 Query: 467 RGHAATWGKKL------DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSV 309 HA K L D + Y +E GG ++YQ FT GSP+SV Sbjct: 294 --HADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTP----FCGSPKSV 346
>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 84.0 bits (206), Expect = 4e-16 Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 6/119 (5%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I G+A STIH+TPEDGFSYAS+E G D + G +V+RVL CF P EFS+A+ Sbjct: 239 SIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIAL----- 293 Query: 467 RGHAATWGKKL------DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSV 309 HA K L D + Y +E GG ++YQ FT GSP+SV Sbjct: 294 --HADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTP----FCGSPKSV 346
>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 362 Score = 83.6 bits (205), Expect = 5e-16 Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I G+A STIH+TPEDGFSYAS+E G D + G +V+RVL CF P+EFS+A+ Sbjct: 239 SIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIAL----- 293 Query: 467 RGHAATWGKKL------DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 306 HA K L D + Y +E GG ++YQ FT A SP+SV Sbjct: 294 --HADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCA----SPKSVL 347 Query: 305 H-CFEGENVE 279 C++ E E Sbjct: 348 KGCWKEEEEE 357
>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC| 4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains: S-adenosylmethionine decarboxylase 3 alpha chain; S-adenosylmethionine decarboxylase 3 beta chain] Length = 367 Score = 83.6 bits (205), Expect = 5e-16 Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 ++ G A STIHVTPEDGFSYAS+E G D + L +V RVL CF P +FSVAV G Sbjct: 237 SVEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG 296 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQEL-PCGGVLIYQSFTANEEVAVSAGSPRSVFHC 300 +A +D E Y C + L G ++YQ+F E++ GSPRS C Sbjct: 297 -SNAYKPEISVDLEDYGCRERTFESLGEESGTVMYQTF---EKLGKYCGSPRSTLKC 349
>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 366 Score = 82.4 bits (202), Expect = 1e-15 Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I G A STIHVTPEDGFSYAS+E G D + L +V RVL CF P +FSVAV G Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG 295 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQEL-PCGGVLIYQSFTANEEVAVSAGSPRSVFHC 300 ++ +D E Y C + L G ++YQ+F E++ GSPRS C Sbjct: 296 -ANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTF---EKLGKYCGSPRSTLKC 348
>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 369 Score = 81.3 bits (199), Expect = 2e-15 Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 1/117 (0%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 ++ G A STIHVTPEDGFSYAS+E G D + + +V +VL CF P +FSVAV Sbjct: 239 SVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFEPKQFSVAVHSSVA 298 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQEL-PCGGVLIYQSFTANEEVAVSAGSPRSVFHC 300 + + G +D E Y C + L G ++YQSF E++ GSPRS C Sbjct: 299 Q-KSYDSGLSVDLEDYGCRETTIELLGEERGTVMYQSF---EKLGRYCGSPRSTLKC 351
>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 80.9 bits (198), Expect = 3e-15 Identities = 58/133 (43%), Positives = 71/133 (53%), Gaps = 10/133 (7%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AI G A STIHVTPEDGFSYAS+E G D ++ +++RVL CF PSEFSVA + G Sbjct: 237 AIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVA--LHGN 294 Query: 467 RGHAATWGKKLDAEAYDCN----NIVEQELPC----GGVLIYQSFTANEEVAVSAGSPRS 312 K L+ E D N N+ E + GG ++Y F S GSPRS Sbjct: 295 ENVV----KDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARG---GSSCGSPRS 347 Query: 311 VFH-CF-EGENVE 279 H C+ E EN E Sbjct: 348 TLHRCWSETENEE 360
>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 362 Score = 80.1 bits (196), Expect = 5e-15 Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 2/118 (1%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAV-TIFG 471 +I G A STIHVTPEDGFSYAS+E G D + + +V +VL CF P +FSVAV + Sbjct: 235 SIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVA 294 Query: 470 GRGHAATWGKKLDAEAYDCNNIVEQEL-PCGGVLIYQSFTANEEVAVSAGSPRSVFHC 300 + + + G +D + Y C + L G ++YQ F E++ GSPRS C Sbjct: 295 QKSYDS--GLSVDLDDYGCKESTMESLGEERGTVMYQRF---EKLGRYCGSPRSTLKC 347
>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 361 Score = 79.0 bits (193), Expect = 1e-14 Identities = 45/116 (38%), Positives = 59/116 (50%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 A+ G A STIH+TPEDGFSY+S+E G D ++ D+V RVL CF P EFS+A+ Sbjct: 237 AVEGPAVSTIHITPEDGFSYSSFEAVGYDPKSVNLSDLVARVLNCFQPGEFSIALQA-DI 295 Query: 467 RGHAATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVFHC 300 + + Y +EL G ++YQ F E SPRSV C Sbjct: 296 ASELLEKTSSVHVKGYRVEEKTCEELGMDGSIVYQKFVKTTE---RCESPRSVLKC 348
>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 360 Score = 78.6 bits (192), Expect = 2e-14 Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 +I G+A STIH+TPEDGF+YAS+E G + + G +V+RVL CF P+EFSVA+ Sbjct: 239 SIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVAL----- 293 Query: 467 RGHAATWGKKL------DAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSVF 306 HA K L D + Y +E GG ++YQ FT SP+SV Sbjct: 294 --HADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTP----YCESPKSVL 347 Query: 305 H-CFEGENVE 279 C++ E E Sbjct: 348 KGCWKEEEKE 357
>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 377 Score = 73.2 bits (178), Expect = 6e-13 Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 9/132 (6%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AI G A STIH+TPEDGFSYAS+E G D + +V+RVL CF P EFS+AV Sbjct: 249 AIEGPAVSTIHITPEDGFSYASFEAVGYDLQVVDLNLLVERVLACFEPKEFSIAV----- 303 Query: 467 RGHAATWGKKLDAEAYDCN-NIVE--------QELPCGGVLIYQSFTANEEVAVSAGSPR 315 T K L A +C+ N++ +EL GG + YQ F + Sbjct: 304 HADTDTADKVL---ARNCSVNVIGYSREEGGIEELGLGGSVFYQKFCKGTAPVCPPAPKK 360 Query: 314 SVFHCFEGENVE 279 ++ C++ E ++ Sbjct: 361 TLKCCWKEEEID 372
>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 381 Score = 72.8 bits (177), Expect = 8e-13 Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 8/128 (6%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 AI G A STIH+TPEDGFSYAS+E G D + +V+RVL CF P EFS+AV++ Sbjct: 258 AIEGPAVSTIHITPEDGFSYASFEAVGYDLKIVDVNQLVERVLNCFQPREFSIAVSV--- 314 Query: 467 RGHAATWGKKLDAEAYDCNNIV--------EQELPCGGVLIYQSFTANEEVAVSAGSPRS 312 T K L E Y N+ + L GG ++YQ F +VA +G +S Sbjct: 315 ----DTADKVL--EQYCAVNVAGYCREEGGVEGLGVGGSVLYQKF---GKVATVSGLNKS 365 Query: 311 VFHCFEGE 288 C + E Sbjct: 366 PKCCRKEE 373
>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 368 Score = 72.0 bits (175), Expect = 1e-12 Identities = 37/78 (47%), Positives = 46/78 (58%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGG 468 ++ G A STIHVTPEDGFSYAS+E G D + + +V RVL CF P +FSVAV Sbjct: 237 SVEGDASSTIHVTPEDGFSYASFEAVGYDFTTMDLSQLVSRVLTCFEPKQFSVAVHSSVA 296 Query: 467 RGHAATWGKKLDAEAYDC 414 + G +D E Y C Sbjct: 297 QKSYDHSGLSVDLEDYGC 314
>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 363 Score = 71.2 bits (173), Expect = 2e-12 Identities = 33/55 (60%), Positives = 39/55 (70%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAV 483 AI G A STIH+TPEDGFSYAS+E G D +V+RVL CF PSEFS+A+ Sbjct: 235 AIEGPAISTIHITPEDGFSYASFEAVGYDLKKTDLNQLVERVLACFEPSEFSIAI 289
>DCAM_TRYBB (P50244) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 370 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/57 (49%), Positives = 34/57 (59%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTI 477 AI GS + TIH+TPE+ S+ASYE + AL Y + VLR F P FSV V I Sbjct: 252 AIRGSEYQTIHITPEEHCSFASYET---NTCALNYSKCICGVLRVFDPERFSVIVFI 305
>DCAM_TRYCR (O76240) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 370 Score = 49.7 bits (117), Expect = 8e-06 Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 7/109 (6%) Frame = -3 Query: 644 INGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTI--FG 471 I G+ + TIH+TPED S+ASYE + A+ Y + + VL F P FSV V I Sbjct: 254 IRGAEYQTIHITPEDHCSFASYET---NTPAVNYSERINTVLGVFAPIRFSVIVFIDPDS 310 Query: 470 GRGHAATWGKKLDAEA-----YDCNNIVEQELPCGGVLIYQSFTANEEV 339 G G+ + EA Y+ N E G V++ ++ EV Sbjct: 311 DVGRLYQKGQNVGVEAEYYPKYELQNRTVNEFAPGYVVMKMNYARRAEV 359
>DCAM_LEIIN (Q9NGA0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 392 Score = 46.2 bits (108), Expect = 8e-05 Identities = 24/55 (43%), Positives = 32/55 (58%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAV 483 AI + T+H+TPED S+ASYE A+ Y D +K+VL F P F+V V Sbjct: 267 AIRDEEYQTMHITPEDHCSFASYETNSRAAN---YSDRMKKVLGVFRPQRFTVIV 318
>DCAM_LEIDO (Q25264) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 382 Score = 46.2 bits (108), Expect = 8e-05 Identities = 24/55 (43%), Positives = 32/55 (58%) Frame = -3 Query: 647 AINGSAFSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAV 483 AI + T+H+TPED S+ASYE A+ Y D +K+VL F P F+V V Sbjct: 257 AIRDEEYQTMHITPEDHCSFASYETNSRAAN---YSDRMKKVLGVFRPQRFTVIV 308
>DCAM_SCHPO (Q9P7E3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 378 Score = 40.8 bits (94), Expect = 0.003 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Frame = -3 Query: 629 FSTIHVTPEDGFSYASYEVQGMDASALVYG----DIVKRVLRCFGPSEFSVAVTIFGGRG 462 ++TIHVTP++ SYAS+E + S +G + +++ ++ FG ++F + + G Sbjct: 284 YATIHVTPQEHCSYASFET---NVSQFQFGRSISETIEKTVKTFGANKFCLTLFQAKGAS 340 Query: 461 HAATWGKKLDA-EAYDCNNIVEQELPCGGVLIYQSFTA 351 + KL + +Y + + P G LI+ SFTA Sbjct: 341 QEKHFSAKLKSFSSYKREEFIVYDFP-GYDLIFASFTA 377
>DCAM_MESAU (P28918) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM_HUMAN (P17707) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM_BOVIN (P50243) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM2_MUSSP (P82185) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM2_MOUSE (P82184) S-adenosylmethionine decarboxylase proenzyme 2 (EC| 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM1_MOUSE (P31154) S-adenosylmethionine decarboxylase proenzyme 1 (EC| 4.1.1.50) (AdoMetDC 1) (SamdC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain] Length = 334 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM_RAT (P17708) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 333 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++++V+ F P +F Sbjct: 241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKF 280
>DCAM_XENLA (P79888) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 335 Score = 39.7 bits (91), Expect = 0.008 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -3 Query: 623 TIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEF 495 TIH+TPE FSY S+E + S Y D++ +V+ F P +F Sbjct: 243 TIHITPEPDFSYVSFET---NVSLTTYDDLISKVVDVFKPRKF 282
>DCAM_DROME (P91931) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 347 Score = 38.9 bits (89), Expect = 0.013 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = -3 Query: 629 FSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGGR 465 + TIH+TPE+ FSY S+E + + Y ++ +V+ F P +F VTIF + Sbjct: 247 YMTIHITPENQFSYVSFET---NVALSNYRKLINQVINTFKPGKF--IVTIFANK 296
>DCAM_ONCVO (Q27883) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 365 Score = 38.5 bits (88), Expect = 0.017 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 7/98 (7%) Frame = -3 Query: 629 FSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIFGGRGHAAT 450 + TIHVTPE FSY S+E + L + + +VL F PS+F +TIF + Sbjct: 259 YITIHVTPEPDFSYVSFET---NQHTLNLCEQMLKVLEIFKPSKF--LLTIF--TNELSN 311 Query: 449 WGKKLDAEAYDC-------NNIVEQELPCGGVLIYQSF 357 GKK+ +D N+ ELP LIY F Sbjct: 312 EGKKMQKNLWDLKICGCRRTNLQFLELPT-ETLIYVQF 348
>DCAM_CAEEL (O02655) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 368 Score = 38.1 bits (87), Expect = 0.023 Identities = 19/52 (36%), Positives = 33/52 (63%) Frame = -3 Query: 629 FSTIHVTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAVTIF 474 ++TIHVTPE FS+AS+E + + ++VL+CF P++ + +T+F Sbjct: 257 YATIHVTPEKAFSFASFET---NQDLVCLYSQTRKVLQCFRPNK--ILMTVF 303
>DCAM_YEAST (P21182) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)| (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] Length = 396 Score = 36.6 bits (83), Expect = 0.066 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Frame = -3 Query: 629 FSTIHVTPEDGFSYASYE----VQGMDASALVYGDIVKRVLRCFGPSEFSV 489 + T+HVTPE G+SYAS+E V + D++ +L F P EFS+ Sbjct: 297 YYTLHVTPEKGWSYASFESNIPVFDISQGKQDNLDVLLHILNVFQPREFSM 347
>RPIA_BORPE (Q7VWC1) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 31.2 bits (69), Expect = 2.8 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = +3 Query: 288 LALEAVEDGPGRPGG-----------DSNLFIRGKALVDEDAPAGELLLHDVVAVVCLGV 434 +A AV G R GG + N+ + L DAP E ++D+ VV G+ Sbjct: 143 MARNAVARGLSRLGGQPALREGFVTDNGNIILDVAGLSIADAPGLEKTINDIPGVVTCGL 202 Query: 435 ELLAPGGGVAAATEDGDRHRE 497 LA AT+DG R E Sbjct: 203 FALAGADVALLATQDGIRRLE 223
>RPIA_BORPA (Q7W9Q5) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 31.2 bits (69), Expect = 2.8 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = +3 Query: 288 LALEAVEDGPGRPGG-----------DSNLFIRGKALVDEDAPAGELLLHDVVAVVCLGV 434 +A AV G R GG + N+ + L DAP E ++D+ VV G+ Sbjct: 143 MARNAVARGLSRLGGQPALREGFVTDNGNIILDVAGLSIADAPGLEKTINDIPGVVTCGL 202 Query: 435 ELLAPGGGVAAATEDGDRHRE 497 LA AT+DG R E Sbjct: 203 FALAGADVALLATQDGIRRLE 223
>RPIA_BORBR (Q7WH03) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 31.2 bits (69), Expect = 2.8 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Frame = +3 Query: 288 LALEAVEDGPGRPGG-----------DSNLFIRGKALVDEDAPAGELLLHDVVAVVCLGV 434 +A AV G R GG + N+ + L DAP E ++D+ VV G+ Sbjct: 143 MARNAVARGLSRLGGQPALREGFVTDNGNIILDVAGLSIADAPGLEKTINDIPGVVTCGL 202 Query: 435 ELLAPGGGVAAATEDGDRHRE 497 LA AT+DG R E Sbjct: 203 FALAGADVALLATQDGIRRLE 223
>PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7.11.1)| Length = 618 Score = 30.4 bits (67), Expect = 4.7 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = -3 Query: 491 VAVTIFGGRGHAATWGKKLDAEA----YDCNNIVEQELPCG 381 V VT +G G+A+ GK+L EA C + + PCG Sbjct: 471 VGVTWYGASGYASWVGKRLPTEAEWEIASCGGVTQLRYPCG 511
>GSAB_LISMO (Q8Y6J9) Glutamate-1-semialdehyde 2,1-aminomutase 2 (EC 5.4.3.8)| (GSA 2) (Glutamate-1-semialdehyde aminotransferase 2) (GSA-AT 2) Length = 432 Score = 30.0 bits (66), Expect = 6.2 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Frame = -3 Query: 614 VTPEDGFSYASYEVQGMDASALVYGDIVKRVLRCFGPSEFSVAV--------TIFGGRGH 459 V PEDGF A E+ ++ S ++Y +++ +G ++ + V I GG Sbjct: 216 VAPEDGFLEAVNELAHVNGSLVIYDEVITAFRFMYGGAQNYLGVIPDLTAMGKIIGGGLP 275 Query: 458 AATWGKKLDAEAYDCNNIVEQELPCGGVLIYQSFTANEEVAVSAGSPRSV 309 +G ++D I+E+ P G YQ+ T AG+P S+ Sbjct: 276 IGAYGGRID--------IMEKVAPLGPA--YQAGT-------HAGNPASI 308
>FTHS_EUBAC (Q5XZD9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 556 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/74 (24%), Positives = 29/74 (39%) Frame = +3 Query: 423 CLGVELLAPGGGVAAATEDGDRHREL*RAEAPENPLDDVAVDQGGGVHALDLIARVAEAV 602 C GV+ A GGG A P+DD+ + G +HA+ + A+ Sbjct: 101 CFGVKGGAAGGGYAQVV-----------------PMDDINLHFTGDIHAITTAHNLLAAL 143 Query: 603 LGGHMDGGEGRSVD 644 + H+ G +D Sbjct: 144 MDNHIKQGNALGID 157 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,260,535 Number of Sequences: 219361 Number of extensions: 1621012 Number of successful extensions: 5028 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 4873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5013 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)