Clone Name | rbasd19l21 |
---|---|
Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 1179 bits (595), Expect = 0.0 Identities = 624/634 (98%) Strand = Plus / Minus Query: 1 acttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgag 60 |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||| Sbjct: 641 acttttatattaagccaagggtataaatagattcatcgtgggttctcttattggaacgag 582 Query: 61 ggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 ggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatca 522 Query: 121 agattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 agattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggc 462 Query: 181 atgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 atgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgt 402 Query: 241 tgctgcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttgt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 401 tgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgt 342 Query: 301 cacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggatt 360 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 cacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccggatt 282 Query: 361 cagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 cagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttac 222 Query: 421 aaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagc 480 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 221 aaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagc 162 Query: 481 agtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaa 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 161 agtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaa 102 Query: 541 ctaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 ctaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatgg 42 Query: 601 ttggctggttggccttaatttctcaagtagaatg 634 |||||||||||||||||||||||||||||||||| Sbjct: 41 ttggctggttggccttaatttctcaagtagaatg 8
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 1130 bits (570), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Minus Query: 45 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 105 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 478 Query: 165 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacag 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacag 418 Query: 225 aaacgggcacatgcgttgctgcagagtcccatgtcgaaattcatctcttggccacgggaa 284 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 417 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaa 358 Query: 285 acattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgca 344 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 357 acattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgca 298 Query: 345 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 238 Query: 405 ccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaa 464 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 237 ccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaa 178 Query: 465 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctact 524 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctact 118 Query: 525 tggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactc 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 tggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactc 58 Query: 585 ttgttggttgccatggttggctggttggccttaatttctcaagtagaatg 634 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ttgttggttgccatggttggctggttggccttaatttctcaagtagaatg 8
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 1039 bits (524), Expect = 0.0 Identities = 539/544 (99%) Strand = Plus / Minus Query: 25 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485 Query: 85 agatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatgacaa 144 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 484 agatgatacatttgcttcgatgtggtgatggtatcaagattgttgaacagaaaatgacaa 425 Query: 145 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaa 204 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 424 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaa 365 Query: 205 tgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaaat 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 364 tgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatt 305 Query: 265 tcatctcttggccacgggaaacattgtccatgttgtcacaaacggaagtcctgcatccaa 324 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 304 tcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaa 245 Query: 325 ttgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggat 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ttgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggat 185 Query: 385 agtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 agtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactg 125 Query: 445 gtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgc 504 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgc 65 Query: 505 agcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 agcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaa 5 Query: 565 taac 568 |||| Sbjct: 4 taac 1
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 1017 bits (513), Expect = 0.0 Identities = 528/533 (99%) Strand = Plus / Minus Query: 102 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 162 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 222 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaaattcatctcttggccacgg 281 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 282 gaaacattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtc 341 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 342 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 402 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 462 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 522 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 61 Query: 582 ctcttgttggttgccatggttggctggttggccttaatttctcaagtagaatg 634 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ctcttgttggttgccatggttggctggttggccttaatttctcaagtagaatg 8
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 886 bits (447), Expect = 0.0 Identities = 473/482 (98%) Strand = Plus / Minus Query: 1 acttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgag 60 |||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 482 acttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacgag 423 Query: 61 ggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 ggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggtatca 363 Query: 121 agattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggc 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 362 agattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaaggc 303 Query: 181 atgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 atgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgt 243 Query: 241 tgctgcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttgt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 242 tgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggttgt 183 Query: 301 cacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggatt 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggatt 123 Query: 361 cagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttac 420 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122 cagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgattttac 63 Query: 421 aaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagc 3 Query: 481 ag 482 || Sbjct: 2 ag 1
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 789 bits (398), Expect = 0.0 Identities = 410/414 (99%) Strand = Plus / Minus Query: 185 ttaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgct 244 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 245 gcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttgtcaca 304 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 305 aacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 364 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 365 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 425 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 484 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 485 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 545 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 720 bits (363), Expect = 0.0 Identities = 559/622 (89%), Gaps = 2/622 (0%) Strand = Plus / Minus Query: 1 acttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgag 60 |||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 623 acttttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaag 564 Query: 61 ggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatc 119 ||||||| ||||||| ||||| ||||||||||||||| ||||||| | | |||||||||| Sbjct: 563 ggaaaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatc 505 Query: 120 aagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaagg 179 |||||| || || | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 504 aagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaagg 445 Query: 180 catgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcg 239 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 444 catgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcg 385 Query: 240 ttgctgcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttg 299 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 384 ttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttg 325 Query: 300 tcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggat 359 ||||| || ||| ||||||||||||| |||||||||| ||| ||| ||||||||||||| Sbjct: 324 tcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggat 265 Query: 360 tcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgatttta 419 |||||||||||||| || ||||||||||| ||||| ||| |||| || |||||||||||| Sbjct: 264 tcagggagaagattaagtttaggatagtcactagggcattttggaccacttatgatttta 205 Query: 420 caaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtag 479 |||| ||||||| |||||||||||| ||||||||||| ||||||||||| | ||||||| Sbjct: 204 caacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtag 145 Query: 480 cagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccaga 539 |||||||| | ||||| |||||||||||| || || || || ||||||||||||||| Sbjct: 144 cagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccaga 85 Query: 540 actaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatg 599 |||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| ||||||| Sbjct: 84 actaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccatg 25 Query: 600 gttggctggttggccttaattt 621 ||||||| ||||| ||||||| Sbjct: 24 gttggcttcttggctttaattt 3
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 698 bits (352), Expect = 0.0 Identities = 545/607 (89%), Gaps = 2/607 (0%) Strand = Plus / Minus Query: 1 acttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgag 60 |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| || Sbjct: 616 acttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaag 557 Query: 61 ggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatc 119 ||||||| | |||||||||| |||||||||||||| ||||| || | | |||||||||| Sbjct: 556 ggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatggtatc 498 Query: 120 aagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaagg 179 |||||| || || | |||||||||| |||||| |||||||||||||||||| |||||||| Sbjct: 497 aagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaagaagg 438 Query: 180 catgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcg 239 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 437 catgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcg 378 Query: 240 ttgctgcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttg 299 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 377 ttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttg 318 Query: 300 tcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggat 359 ||||| || ||| ||||||||||||| |||||||||| || ||| ||||||||||||| Sbjct: 317 tcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcaccggat 258 Query: 360 tcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgatttta 419 ||||||||||||||||| ||||||||||| ||||| ||| |||| || |||||||||||| Sbjct: 257 tcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgatttta 198 Query: 420 caaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtag 479 |||| ||||||| |||||||||||| ||||||||||| |||||| |||| | ||||||| Sbjct: 197 caacgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagtgttgtag 138 Query: 480 cagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccaga 539 |||||||| | ||||| |||||||||||| || || || || ||||||||||||||| Sbjct: 137 cagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccaga 78 Query: 540 actaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccatg 599 |||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| ||||||| Sbjct: 77 actaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccatg 18 Query: 600 gttggct 606 ||||||| Sbjct: 17 gttggct 11
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Minus Query: 353 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 412 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 413 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 533 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 593 tgccatggttggctggttggccttaatttctcaagtagaatg 634 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1557 tgccatggttggctggttggccttaatttctcatgtagaatg 1516 Score = 349 bits (176), Expect = 7e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 103 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 163 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 223 agaaacgggcacatgcgttgctgcagagtcccatgtcgaaattcatctcttggccacggg 282 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 283 aaac 286 |||| Sbjct: 2057 aaac 2054 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 286 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 346 ttggttcacc 355 |||||||||| Sbjct: 1903 ttggttcacc 1894
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 519 bits (262), Expect = e-144 Identities = 398/441 (90%), Gaps = 2/441 (0%) Strand = Plus / Minus Query: 4 tttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgaggga 63 ||||||||||| | |||||| ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 64 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 122 |||| ||||||| ||||| ||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 380 aaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322 Query: 123 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 182 ||| || || | |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262 Query: 183 gattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttg 242 ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 202 Query: 243 ctgcagagtcccatgtcgaaattcatctcttggccacgggaaacattgtccatgttgtca 302 |||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||| Sbjct: 201 ctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtca 142 Query: 303 caaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 362 || || ||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 141 cagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattca 82 Query: 363 gggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaa 422 ||||||||||| || ||||||||||| ||||| ||| |||| || ||||||||||||||| Sbjct: 81 gggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaa 22 Query: 423 ccacaagcagttgcgcagact 443 | ||||||| |||||||||| Sbjct: 21 cgacaagcacctgcgcagact 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 373 bits (188), Expect = e-100 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 acttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgag 60 |||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| || Sbjct: 2316 acttttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaacaag 2257 Query: 61 ggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatc 119 ||||||| | |||||||||| |||||||||||||| ||||| || | | |||||||||| Sbjct: 2256 ggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatggtatc 2198 Query: 120 aagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaagg 179 |||||| || || | |||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 2197 aagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaagg 2138 Query: 180 catgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcg 239 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2137 catgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcg 2078 Query: 240 ttgctgcagagtcccatgtcgaaattcatctcttggccacgggaaac 286 ||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 2077 ttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 281 bits (142), Expect = 1e-72 Identities = 247/282 (87%) Strand = Plus / Minus Query: 353 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 412 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 413 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 472 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 533 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 592 ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 593 tgccatggttggctggttggccttaatttctcaagtagaatg 634 |||||||||||||| ||||| |||||||||| || |||||| Sbjct: 1536 tgccatggttggcttcttggctttaatttctccagaagaatg 1495 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 286 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 345 ||||||||||||||||||| || ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 346 ttggttcacc 355 ||||||||| Sbjct: 1877 ctggttcacc 1868
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 198 bits (100), Expect = 2e-47 Identities = 366/454 (80%), Gaps = 3/454 (0%) Strand = Plus / Minus Query: 148 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 207 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 208 cttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaaattca 267 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| |||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 268 tctcttggccacgggaaacattgtccatgttgtcacaaacggaagtcctgcatccaattg 327 ||||||||||| | ||||||||||||||||||||||||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 328 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 387 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 388 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 447 | |||||||||| ||| || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 448 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 507 ||||| ||||| ||||||||| |||| ||||||||||| | | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 508 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaataa 567 ||||||| || ||||| ||||||||| ||||||||||||| | || ||| ||||||| | Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80 Query: 568 ccacgctcttaatactcttgttggttgccatggt 601 |||| | ||||| || ||| ||||||||||||| Sbjct: 79 ccacacacttaagacctttggtggttgccatggt 46
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 192 bits (97), Expect = 1e-45 Identities = 259/313 (82%) Strand = Plus / Minus Query: 294 atgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 353 ||||||||||||||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 354 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 413 ||| |||||| |||||||| | | ||||| | || || ||||| |||| || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 414 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 473 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 474 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 533 |||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 534 tccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggtt 593 |||||||||||||||| ||||| | ||||||||| | ||||| |||| |||| | || Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 594 gccatggttggct 606 ||||||||||||| Sbjct: 86 gccatggttggct 74 Score = 79.8 bits (40), Expect = 1e-11 Identities = 118/144 (81%) Strand = Plus / Minus Query: 137 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 196 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 197 agactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 256 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 257 gtcgaaattcatctcttggccacg 280 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 113 bits (57), Expect = 7e-22 Identities = 114/133 (85%) Strand = Plus / Minus Query: 472 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 531 |||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||| | Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90 Query: 532 gctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttgg 591 |||||||||||| ||||||| ||||||||||| ||||| ||||||| || |||| | Sbjct: 89 gctccagaactatccccaatacaagaacacaaatgaccacactcttaagacccttgatac 30 Query: 592 ttgccatggttgg 604 || |||||||||| Sbjct: 29 ttcccatggttgg 17
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 129 ttccagaaccaaccccagtatgag 106
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 117 ttccagaaccaaccccagtatgag 94
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 500 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 559 ||||||||||||||| || ||||||||||||||||||||||||| ||||||| || || Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63 Query: 560 acaaataaccacgctcttaa 579 |||||| || || ||||||| Sbjct: 62 acaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 502 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 556 ||||||||||||||||||||||||| || || |||||||| || |||| |||||| Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48 Query: 533 ctccagaac 541 || ||||| Sbjct: 47 ttcgagaac 39
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426 Query: 533 ctccagaac 541 || ||||| Sbjct: 425 ttcgagaac 417
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 473 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 532 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32 Query: 533 ctccagaactaaacccaatatgag 556 |||||||| || |||| |||||| Sbjct: 31 ttccagaaccaaccccagtatgag 8
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence Length = 58609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 aaaaaacagaaatacataact 83 ||||||||||||||||||||| Sbjct: 8230 aaaaaacagaaatacataact 8210
>gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, complete sequence Length = 212083 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 tggttggccttaatttctcaa 626 ||||||||||||||||||||| Sbjct: 89657 tggttggccttaatttctcaa 89637
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 caagattgttgaacagaaaat 139 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 ttgtccatgttgtcacaaacggaag 312 ||||||||||||||||||| ||||| Sbjct: 87238 ttgtccatgttgtcacaaatggaag 87262
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 caagattgttgaacagaaaat 139 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 cgtgttcttgcagcaactct 513 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, complete sequence Length = 148219 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 ttttatattaagnccagggtata 25 |||||||||||| |||||||||| Sbjct: 109864 ttttatattaagaccagggtata 109842
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cgtgttcttgcagcaactct 513 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete sequence Length = 159981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ttaatactcttgttggttgc 595 |||||||||||||||||||| Sbjct: 131995 ttaatactcttgttggttgc 131976
>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a novel FLJ21562 containing gene, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 145481 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 gctggttggccttaatttct 623 |||||||||||||||||||| Sbjct: 89214 gctggttggccttaatttct 89195
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaatacataactaagatgat 91 |||||||||||||||||||| Sbjct: 70952 aaatacataactaagatgat 70971
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aaatacataactaagatgat 91 |||||||||||||||||||| Sbjct: 645 aaatacataactaagatgat 664
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aactaagatgatacatttgc 99 |||||||||||||||||||| Sbjct: 96493 aactaagatgatacatttgc 96512
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 gttgccatggttggctggtt 610 |||||||||||||||||||| Sbjct: 1035668 gttgccatggttggctggtt 1035649
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 aacccaatatgagaacacaa 563 |||||||||||||||||||| Sbjct: 112938 aacccaatatgagaacacaa 112957
>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence Length = 220855 Score = 40.1 bits (20), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 ttttatattaagnccagggtata 25 |||||||||||| |||||||||| Sbjct: 203123 ttttatattaagaccagggtata 203101
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aagattgttgaacagaaaat 139 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence Length = 34686 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 acagaaatacataactaaga 87 |||||||||||||||||||| Sbjct: 19747 acagaaatacataactaaga 19766
>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein (vis1) gene, complete cds Length = 2257 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 actcttattggaacgagggaaaaa 67 |||||||||||||||| ||||||| Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein (vis1) gene, complete cds Length = 2224 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 actcttattggaacgagggaaaaa 67 |||||||||||||||| ||||||| Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 aacccaatatgagaacacaa 563 |||||||||||||||||||| Sbjct: 31644 aacccaatatgagaacacaa 31663
>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence Length = 217898 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aaaaaacagaaatacataac 82 |||||||||||||||||||| Sbjct: 161134 aaaaaacagaaatacataac 161153
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttgtccatgttgtcacaaac 307 |||||||||||||||||||| Sbjct: 53181 ttgtccatgttgtcacaaac 53200
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 aactaagatgatacatttgc 99 |||||||||||||||||||| Sbjct: 32396 aactaagatgatacatttgc 32377
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aaaaaacagaaatacataac 82 |||||||||||||||||||| Sbjct: 101064 aaaaaacagaaatacataac 101083
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 ccttggccatagaaatcatgccca 173 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aagattgttgaacagaaaat 139 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,398,042 Number of Sequences: 3902068 Number of extensions: 5398042 Number of successful extensions: 102202 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102050 Number of HSP's gapped (non-prelim): 135 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)