ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha... 79 1e-14
2KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha... 77 6e-14
3RKIN1_SECCE (Q02723) Carbon catabolite derepressing protein kina... 73 8e-13
4BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L) 32 2.1
5BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G) 32 2.1
6BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-... 32 2.1
7BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A) 31 2.7
8BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J) 30 6.1
9BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-... 30 6.1
10MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Ca... 30 7.9

>KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha subunit KIN11|
           (EC 2.7.11.1) (AKIN11) (AKIN alpha1)
          Length = 512

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
 Frame = -1

Query: 640 KKIGHYNMKCRWSPGFP-GQDNMNHTNYNFIAEP--IETDDVGDKLNLIKFELQLYKTKD 470
           KKIGHYNMKCRW PG   GQ+ M +   +F  E   IE D       +IKFELQLYK ++
Sbjct: 422 KKIGHYNMKCRWVPGLADGQNTMVNNQLHFRDESSIIEDDCAMTSPTVIKFELQLYKARE 481

Query: 469 EKYLLDLQRASGP 431
           EKYLLD+QR +GP
Sbjct: 482 EKYLLDIQRVNGP 494



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>KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10|
           (EC 2.7.11.1) (AKIN10) (AKIN alpha2)
          Length = 535

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 44/93 (47%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
 Frame = -1

Query: 640 KKIGHYNMKCRWSPGFPGQ---DNMNHTNYNFIAEP--IETDDVGDKLNLIKFELQLYKT 476
           KKIGHYNMKCRW P         N  H N  F  E   IE +      N++KFE+QLYKT
Sbjct: 443 KKIGHYNMKCRWVPNSSADGMLSNSMHDNNYFGDESSIIENEAAVKSPNVVKFEIQLYKT 502

Query: 475 KDEKYLLDLQRASGPHXXXXXXXXXXXXXLRVL 377
           +D+KYLLDLQR  GP              LRVL
Sbjct: 503 RDDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 535



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>RKIN1_SECCE (Q02723) Carbon catabolite derepressing protein kinase (EC|
           2.7.11.1)
          Length = 502

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
 Frame = -1

Query: 625 YNMKCRWSPGFPG-QDNMNHTNYNFIAEPIETD--DVGDKLN-LIKFELQLYKTKDEKYL 458
           YNMKCRW PGFP   D +   N++F+ +    D  D   +L  +IKFE+QLYKTKD+KYL
Sbjct: 416 YNMKCRWCPGFPRVSDMLLDANHSFVDDCAIKDNGDANSRLPAVIKFEIQLYKTKDDKYL 475

Query: 457 LDLQRASGPHXXXXXXXXXXXXXLRVL 377
           LD+QR +GP              LRVL
Sbjct: 476 LDMQRVTGPQLLFLEFCAAFLTNLRVL 502



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>BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L)|
          Length = 159

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 470
           K  +  GFP +      D ++HTN+ +    IE   VGD L  I  E+++  T D
Sbjct: 55  KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109



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>BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G)|
          Length = 159

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 470
           K  +  GFP +      D ++HTN+ +    IE   VGD L  I  E+++  T D
Sbjct: 55  KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109



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>BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-D/H)|
          Length = 159

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 470
           K  +  GFP +      D ++HTN+ +    IE   VGD L  I  E+++  T D
Sbjct: 55  KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109



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>BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A)|
          Length = 159

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 455
           K  +  GFP +      D ++HTN+ +    IE   +GD L  I  E+++  T D   +L
Sbjct: 55  KISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSIL 114

Query: 454 DL 449
            +
Sbjct: 115 KI 116



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>BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J)|
          Length = 159

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 455
           K  +  GFP +      D ++HTN+ +    IE   VGD L  I  E+++  T +   +L
Sbjct: 55  KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114

Query: 454 DL 449
            +
Sbjct: 115 KI 116



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>BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-F/I)|
          Length = 159

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 616 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 455
           K  +  GFP +      D ++HTN+ +    IE   VGD L  I  E+++  T +   +L
Sbjct: 55  KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114

Query: 454 DL 449
            +
Sbjct: 115 KI 116



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>MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Car b I)|
          Length = 159

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 583 DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQL 485
           + ++HTN+ +    IE D +GDKL  +  EL++
Sbjct: 72  EEIDHTNFKYNYTVIEGDVLGDKLEKVSHELKI 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,517,565
Number of Sequences: 219361
Number of extensions: 1947630
Number of successful extensions: 4735
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4732
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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