ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19l08 |
|---|---|
| Clone Library Name | barley_pub |
>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 94.7 bits (234), Expect = 1e-19 Identities = 38/43 (88%), Positives = 39/43 (90%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 295 DEFWICCD CE W+HGKCVKITPARAEHIK YKCP CSNKRAR Sbjct: 212 DEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254
>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)| (Trithorax-homolog protein 3) (TRX-homolog protein 3) (Protein SET DOMAIN GROUP 14) Length = 902 Score = 49.3 bits (116), Expect = 6e-06 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKH--YKCPDC 313 D W+CCD C+ W H +C IT R + ++H Y CPDC Sbjct: 363 DGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDC 401
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 48.9 bits (115), Expect = 8e-06 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKH----YKCPDCS 310 + F ICCD CE W+HG CV I+ AR ++ Y CP+C+ Sbjct: 276 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 317
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 48.9 bits (115), Expect = 8e-06 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKH----YKCPDCS 310 + F ICCD CE W+HG CV I+ AR ++ Y CP+C+ Sbjct: 279 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 320
>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 660 Score = 48.5 bits (114), Expect = 1e-05 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 304 F I CDNC W+HG C++IT A+ I+ + C +C K Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 48.5 bits (114), Expect = 1e-05 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 304 F I CDNC W+HG C++IT A+ I+ + C +C K Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76
>K1718_MOUSE (Q3UWM4) Protein KIAA1718| Length = 940 Score = 44.3 bits (103), Expect = 2e-04 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCS 310 + F I CD C+ W+HG CV + A I Y CPDC+ Sbjct: 49 NRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCA 86
>PHF8_HUMAN (Q9UPP1) PHD finger protein 8| Length = 1060 Score = 43.9 bits (102), Expect = 2e-04 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 F I CD C+ W+HG CV + +A I Y CP+C Sbjct: 55 FMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 89
>PHF8_MOUSE (Q80TJ7) PHD finger protein 8| Length = 1023 Score = 43.9 bits (102), Expect = 2e-04 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 F I CD C+ W+HG CV + +A I Y CP+C Sbjct: 19 FMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 43.1 bits (100), Expect = 4e-04 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 295 F I CD C+ W+HG CV + A I Y CP+C + Sbjct: 19 FMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 59
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 43.1 bits (100), Expect = 4e-04 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 295 F I CD C+ W+HG CV + A I Y CP+C + Sbjct: 19 FMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 59
>K1718_HUMAN (Q6ZMT4) Protein KIAA1718| Length = 941 Score = 42.4 bits (98), Expect = 7e-04 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCS 310 + F I CD C+ W+HG CV + A I Y CP+C+ Sbjct: 49 NRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86
>JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 514 Score = 42.0 bits (97), Expect = 0.001 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDCS 310 W+ CD C +W+H C+KI ++ Y C CS Sbjct: 26 WLQCDICNQWFHASCLKIPKIEVNNLHSYHCEGCS 60
>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1| Length = 1588 Score = 40.8 bits (94), Expect = 0.002 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = -2 Query: 405 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV 292 C NC W+H +CV ++ + +Y CPDC +K ++ Sbjct: 1472 CHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSKEGKL 1509 Score = 37.0 bits (84), Expect = 0.030 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -2 Query: 405 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQ 259 C+ C WYH KC+K++ + + + CP C + R V R P ++ Sbjct: 1187 CELCHEWYHAKCMKMSKKKLRADEKFICPIC-DYRVEVPRHSHRPPLIE 1234
>SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component spp1)| (COMPASS component spp1) (Complex proteins associated with set1 protein spp1) Length = 424 Score = 40.4 bits (93), Expect = 0.003 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -2 Query: 423 DEFWIC-CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 304 D W+ CD CE W+HG CV I + + Y CP C+ + Sbjct: 128 DGSWMLGCDGCEDWFHGTCVNIPESYNDLTVQYFCPKCTEE 168
>JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 478 Score = 40.0 bits (92), Expect = 0.004 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 11/52 (21%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC-----------SNKRARV 292 WI C C+ WYH C+ + + I Y CP+C +KRARV Sbjct: 32 WIQCSKCKVWYHVHCLDLPTDEIDQIVIYHCPECVPKYGESTYKRKSKRARV 83
>LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component lid2)| Length = 1513 Score = 38.1 bits (87), Expect = 0.013 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -2 Query: 405 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQD 256 C+ C WYH KC+K++ + + + CP C + R + R P +L+D Sbjct: 1112 CEICHEWYHAKCLKMSKKKLRQDEKFTCPIC-DYRVEIPRLSNRP-KLED 1159 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 426 KDEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 +D F I C CER +H CV + A+ + + CP C Sbjct: 1364 RDSF-IDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
>JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 510 Score = 38.1 bits (87), Expect = 0.013 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKR 301 W CD C+RW H CV IT + Y CP C+ + Sbjct: 19 WTQCDGCDRWVHDVCVSITDPVS--YAKYHCPTCTKTK 54
>JHD1_YEAST (P40034) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) (ScJHDM1) Length = 492 Score = 37.7 bits (86), Expect = 0.017 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKIT---------------PARAEHIKHYKCPD 316 W+ CD+C +W H KCV + P A+ IK Y+CP+ Sbjct: 21 WVKCDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQIKSYRCPN 68
>TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor SC1)| Length = 346 Score = 35.4 bits (80), Expect = 0.086 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 W+ CD C+ W+H CV + A+ ++CP C Sbjct: 308 WVQCDGCDTWFHVACVGCSIQAAKE-ADFRCPGC 340
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 35.4 bits (80), Expect = 0.086 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHI----KHYKCPDC 313 + F + C C+ W+HG CV ++ ++A+ + K Y C C Sbjct: 729 NRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKC 769
>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III| Length = 721 Score = 35.0 bits (79), Expect = 0.11 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQDSEWN*HQ 235 W+ CD C+ W H CV + A + + Y C C + R +++Q+S + Sbjct: 35 WVQCDGCDCWQHASCVGL--ADKDIPESYYCEVCHS-------RSDVSSQVQNSPNKDEE 85 Query: 234 HQIVDVRRS 208 HQ D+ S Sbjct: 86 HQTADLLAS 94
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous| T-cell lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 34.7 bits (78), Expect = 0.15 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -2 Query: 411 ICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 +CC+ C R YH KC+++T +E + CP+C Sbjct: 101 LCCELCPRVYHAKCLRLT---SEPEGDWFCPEC 130
>TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription factor SC1)| Length = 345 Score = 34.7 bits (78), Expect = 0.15 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>TCF19_MACMU (Q5TM48) Transcription factor 19| Length = 345 Score = 34.7 bits (78), Expect = 0.15 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription factor SC1)| Length = 345 Score = 34.7 bits (78), Expect = 0.15 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 34.3 bits (77), Expect = 0.19 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHI--KHYKCPDCSNK 304 W+ CD C+ W H C +I+ + + Y CP C K Sbjct: 431 WVRCDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTK 469
>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6| (CYC8-TUP1-interacting protein 6) Length = 506 Score = 34.3 bits (77), Expect = 0.19 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 F+I C+ C W HG CV IT A Y C C Sbjct: 88 FFIQCEQCSSWQHGYCVSITQDNAP--DKYWCEQC 120
>ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43)| (Trithorax-related protein 5) (TRX-related protein 5) (Protein SET DOMAIN GROUP 15) Length = 352 Score = 34.3 bits (77), Expect = 0.19 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKR 301 D+ + CD C+R +H KC++ R I + C DCS++R Sbjct: 76 DDELLLCDKCDRGFHMKCLRPIVVRVP-IGTWLCVDCSDQR 115
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 33.9 bits (76), Expect = 0.25 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -2 Query: 420 EFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 E WICC +C+ W+H C+ I + + C C Sbjct: 90 ETWICCTHCKTWFH--CICIGLENPDDFSKWYCQPC 123
>YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 (ING1 homolog| 2) Length = 298 Score = 33.5 bits (75), Expect = 0.33 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Frame = -2 Query: 411 ICCDN--CE-RWYHGKCVKIT-PARAEHIKHYKCPDCSNKRARV*RRQK 277 I CDN C+ W+H CV IT P + + I + CPDC++K + +++K Sbjct: 251 IGCDNEDCKYEWFHWSCVGITSPPKDDEI--WYCPDCASKMEKRKKKRK 297
>SET3_SCHPO (Q10362) SET domain-containing protein 3| Length = 859 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAP-ARLQDSEW 247 D F I C++CE W H CV I + Y C C + + K ARLQ E Sbjct: 14 DGFTIQCESCEVWQHAVCVNIDANNVP--EKYFCEQCQPRPIDADKAHKIQLARLQREE- 70 Query: 246 N*HQHQIVDVRRS 208 Q +I+ RS Sbjct: 71 --EQSRILSRSRS 81
>JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1407 Score = 32.7 bits (73), Expect = 0.56 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Frame = -2 Query: 426 KDEFWICCDNCERWYHGKCVKITPAR-AEHIKHYKCPDC 313 +D WI CD C+RW+H C R + + C C Sbjct: 341 QDVTWISCDGCKRWFHIVCAGFKNDRETRTVDKFICKTC 379
>JHD1_CRYNE (Q55NZ6) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 879 Score = 32.7 bits (73), Expect = 0.56 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCV 367 D W+ C+ C+ WYH C+ Sbjct: 51 DFIWVACNKCDEWYHSACL 69
>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with| SET1 protein SPP1) (Set1C component SPP1) (Suppressor of PRP protein 1) Length = 353 Score = 32.7 bits (73), Expect = 0.56 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -2 Query: 420 EFWICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 E + CD C+ W+H C+ I + + + CP C Sbjct: 34 ELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYC 69
>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11| Length = 562 Score = 32.3 bits (72), Expect = 0.73 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -2 Query: 411 ICCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQK 277 + CD C R YH KC+ + H++CP C + + + +Q+ Sbjct: 73 LICDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRSIKKKHSNKQE 117
>HSP1_PIPSA (Q7JH04) Sperm protamine P1| Length = 45 Score = 32.3 bits (72), Expect = 0.73 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR HR RCCR Sbjct: 4 RRCRSRSRCRRRRRRCHRRRRRCCR 28
>HSP1_EPTBN (Q8WMD3) Sperm protamine P1| Length = 45 Score = 32.3 bits (72), Expect = 0.73 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR HR RCCR Sbjct: 4 RRCRSRSRCRRRRRRCHRRRRRCCR 28
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 32.0 bits (71), Expect = 0.95 Identities = 9/33 (27%), Positives = 21/33 (63%) Frame = -2 Query: 411 ICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 + C+ C +H KC+ + P + +++++CP+C Sbjct: 62 VSCNTCTYAFHAKCL-VPPLKDASVENWRCPEC 93
>JHD1_ASHGO (Q75AL5) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 486 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKIT-------PARAEHIKHYKCPDCSNKRARV 292 W+ C+ C +W H +C+ P+R+ I ++C RAR+ Sbjct: 43 WVQCEACPQWVHVQCIPEECLSGGEYPSRSSDIAAFECSAHGTARARL 90
>JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) Length = 1560 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%) Frame = -2 Query: 405 CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 295 CD C+ W+HG+CV + +P A E + CP C R A Sbjct: 1202 CDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1261 Query: 294 V*RRQKAPARLQDSE 250 + Q+ P RL + E Sbjct: 1262 LVALQRLPVRLPEGE 1276
>Y1342_ARATH (Q9C810) PHD finger protein At1g33420| Length = 697 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -2 Query: 420 EFWICCDNCERWYHGKCVKITPARAEHIKH--YKCPDCSNKRARV*RRQKAPARL 262 E + CD C W+H +C+ I A A K ++C + +K+ + ++++ +++ Sbjct: 616 ERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELYSKKPKQSKKERGSSQV 670
>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A| (Retinoblastoma-binding protein 2) (RBBP-2) Length = 1722 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 17/73 (23%) Frame = -2 Query: 417 FWICCDNCERWYHGKCVKITPA---------RAEHIKHYKCPDCSNKR--------ARV* 289 F + C+ C+ W+H CV + + +A+ +K + CP C R + + Sbjct: 1173 FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVK-FLCPLCMRSRRPRLETILSLLV 1231 Query: 288 RRQKAPARLQDSE 250 QK P RL + E Sbjct: 1232 SLQKLPVRLPEGE 1244
>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1539 Score = 30.4 bits (67), Expect = 2.8 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%) Frame = -2 Query: 405 CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 295 CD C+ W+HG+CV + +P A E + CP C R A Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1248 Query: 294 V*RRQKAPARLQDSE 250 + Q+ P RL + E Sbjct: 1249 LVALQRLPVRLPEGE 1263
>JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1418 Score = 30.4 bits (67), Expect = 2.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKC 370 D WI CD C++W+H C Sbjct: 351 DVTWISCDGCKQWFHIVC 368
>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)| Length = 1535 Score = 30.4 bits (67), Expect = 2.8 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%) Frame = -2 Query: 405 CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 295 CD C+ W+HG+CV + +P A E + CP C R A Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1248 Query: 294 V*RRQKAPARLQDSE 250 + Q+ P RL + E Sbjct: 1249 LVALQRLPVRLPEGE 1263
>JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) Length = 1554 Score = 30.4 bits (67), Expect = 2.8 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%) Frame = -2 Query: 405 CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 295 CD C+ W+HG+CV + +P A E + CP C R A Sbjct: 1202 CDLCQDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1261 Query: 294 V*RRQKAPARLQDSE 250 + Q+ P RL + E Sbjct: 1262 LVALQRLPVRLPEGE 1276
>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1548 Score = 30.4 bits (67), Expect = 2.8 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 15/50 (30%) Frame = -2 Query: 405 CDNCERWYHGKCVKI----TPARAEHIK-----------HYKCPDCSNKR 301 CD C W+HG+CV + + RA H + CP C R Sbjct: 1197 CDLCHDWFHGQCVTVPHLLSSVRASHTSSQLLAWWEWDTKFLCPLCMRSR 1246
>PHF20_MOUSE (Q8BLG0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58 homolog) Length = 1010 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -2 Query: 426 KDEFWICCDNCERWYHGKCVKITPARA-EHIKHYKCPDCSNKR 301 +++F I C+ C+ W HG C+ + E Y C D +R Sbjct: 665 ENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQR 707
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 30.0 bits (66), Expect = 3.6 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Frame = -2 Query: 405 CDNCERWYHGKCVKITPARAEHIKH------YKCPDCSNK 304 C C+RW H KC ++ E + + Y C +C+ + Sbjct: 1588 CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 1627
>PHF7_MOUSE (Q9DAG9) PHD finger protein 7 (Protein NYD-SP6)| Length = 307 Score = 30.0 bits (66), Expect = 3.6 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 15/51 (29%) Frame = -2 Query: 411 ICCDNCERW--------------YHGKCV-KITPARAEHIKHYKCPDCSNK 304 +CC+N R YH KC+ K A+H +KCP C+N+ Sbjct: 162 LCCENLSRTSVENIQSPCCSQAIYHRKCIQKYAHTSAKHF--FKCPQCNNR 210
>NFIX_CHICK (Q90932) Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X)| (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 431 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S + ER Sbjct: 14 PFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEER 54
>PHF7_HUMAN (Q9BWX1) PHD finger protein 7 (Protein NYD-SP6)| Length = 381 Score = 30.0 bits (66), Expect = 3.6 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 408 CCDNCERWYHGKCV-KITPARAEHIKHYKCPDCSNKR 301 CC + YH KC+ K A+H +KCP C+N++ Sbjct: 179 CCS--QAIYHRKCIQKYAHTSAKHF--FKCPQCNNRK 211
>PHF20_HUMAN (Q9BVI0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58) (Glioma-expressed antigen 2) (Transcription factor TZP) (Novel zinc finger protein) Length = 1012 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -2 Query: 426 KDEFWICCDNCERWYHGKCVKITPARA-EHIKHYKCPDCSNKR 301 +++F I C+ C+ W HG C+ + E Y C D +R Sbjct: 662 ENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQR 704
>HSP1_MYODA (Q8WNY8) Sperm protamine P1| Length = 46 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR +R RCCR Sbjct: 4 RCCRSRSRCRRRRRRCYRRRRRCCR 28
>HSP1_EPTFU (Q7JH05) Sperm protamine P1| Length = 47 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR +R RCCR Sbjct: 4 RCCRSRSRCRRRRRRCYRRRRRCCR 28
>HSP1_EPTBR (Q8WMC7) Sperm protamine P1| Length = 47 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR +R RCCR Sbjct: 4 RCCRSRSRCRRRRRRCYRRRRRCCR 28
>HSP1_CHABE (Q8WNY9) Sperm protamine P1| Length = 45 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 393 RSCRSKSRTHPYRRLFHRYHTRCCR 467 R CRS+SR RR +R RCCR Sbjct: 4 RCCRSRSRCRRRRRRSYRRRRRCCR 28
>SYR_CHLPN (Q9Z7Y3) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 561 Score = 29.6 bits (65), Expect = 4.7 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 399 NCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQDS 253 N E W +ITP+ EH HY+C D + K ARV +KAP + ++ Sbjct: 22 NLEDW----APEITPSTKEHFGHYQCND-AMKLARV--LKKAPRAIAEA 63
>CYC02_CATRO (P25923) CYC02 protein| Length = 101 Score = 29.6 bits (65), Expect = 4.7 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -2 Query: 408 CCDNCERWYHGKCVKITPA 352 C C RW+HG+C++ P+ Sbjct: 82 CRHGCCRWFHGRCIRCCPS 100
>NFIX_HUMAN (Q14938) Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X)| (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 502 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S ER Sbjct: 14 PFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEER 54
>NFIX_MOUSE (P70257) Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X)| (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 488 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S ER Sbjct: 14 PFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEER 54
>NFIA_CHICK (P17923) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 522 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S + ER Sbjct: 14 PFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEER 54
>NFIA_RAT (P09414) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 509 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S + ER Sbjct: 14 PFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEER 54
>NFIA_HUMAN (Q12857) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 509 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S + ER Sbjct: 14 PFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEER 54
>NFIA_MOUSE (Q02780) Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A)| (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 532 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S + ER Sbjct: 37 PFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEER 77
>AP1M2_HUMAN (Q9Y6Q5) AP-1 complex subunit mu-2 (Adaptor-related protein complex| 1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 Length = 423 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 Query: 61 SKLVQHYYTNQPTV*NTHKSRVGPT*TN 144 SK++Q Y T Q T KSRV PT TN Sbjct: 128 SKILQEYITQQSNKLETGKSRVPPTVTN 155
>MLO2_SCHPO (Q09329) Protein mlo2| Length = 329 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Frame = -2 Query: 405 CDNCERWYHGKCVK-----ITPARAEHIKHYKCPDCSNK 304 C CE W+H KC++ I AE + C +CS K Sbjct: 141 CILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEK 179
>SET3_YEAST (P36124) SET domain protein 3| Length = 751 Score = 29.3 bits (64), Expect = 6.2 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 Query: 423 DEFWICCDNCERWYHGKCVKI 361 D F I CD+C RW H C I Sbjct: 128 DGFTIQCDHCNRWQHAICYGI 148
>PHF7_RAT (Q6AXW4) PHD finger protein 7| Length = 380 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 408 CCDNCERWYHGKCV-KITPARAEHIKHYKCPDCSNK 304 CC + YH KC+ K A+H +KCP C+N+ Sbjct: 178 CCS--QAIYHRKCIQKYAHTSAKHF--FKCPQCNNR 209
>NFIX_MESAU (P13623) Nuclear factor 1 X-type (Nuclear factor 1/X) (NF1-X)| (NFI-X) (NF-I/X) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein) Length = 441 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +2 Query: 20 PLVEERL*HVR*RDRSWYNTTTPTNQRFKTHTSQESDQHER 142 P +E L HVR +W+N + FK H + S ER Sbjct: 14 PFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEER 54
>AP1M2_MOUSE (Q9WVP1) AP-1 complex subunit mu-2 (Adaptor-related protein complex| 1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 Length = 423 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 Query: 61 SKLVQHYYTNQPTV*NTHKSRVGPT*TN 144 SK++Q Y T Q T KSRV PT TN Sbjct: 128 SKILQEYITQQGNKLETGKSRVPPTVTN 155
>TOP1_HELPY (P55991) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 736 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 ++ C+N + K +K TP E I+ KCP+C Sbjct: 633 FLACNNYPECKNTKSLKNTPNAKETIEGVKCPEC 666
>TOP1_HELPJ (Q9ZMV7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 736 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 414 WICCDNCERWYHGKCVKITPARAEHIKHYKCPDC 313 ++ C+N + K +K TP E I+ KCP+C Sbjct: 633 FLACNNYPECKNTKSLKNTPNAKETIEGVKCPEC 666 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,044,753 Number of Sequences: 219361 Number of extensions: 1075967 Number of successful extensions: 3484 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 3313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3480 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
