ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19l08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 809 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 750 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 749 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 690 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 689 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 630 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 629 tcttcctctcc 619
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 38559671 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 38559730 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 38559731 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 38559790 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 38559791 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 38559850 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 38559851 tcttcctctcc 38559861 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 37458928 tcttcctcctcttcttctcc 37458909
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 152752 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 152811 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 152812 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 152871 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 152872 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 152931 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 152932 tcttcctctcc 152942
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 80352 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 80411 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 80412 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 80471 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 80472 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 80531 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 80532 tcttcctctcc 80542
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 17644 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 17703 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 17704 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 17763 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 17764 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 17823 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 17824 tcttcctctcc 17834
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full insert sequence Length = 1296 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 1033 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 974 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 973 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 914 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 913 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 854 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 853 tcttcctctcc 843
>dbj|AK058384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-H10, full insert sequence Length = 576 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 403 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 344 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 343 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 284 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 283 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 224 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 223 tcttcctctcc 213
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1156 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 921 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 862 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 861 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 802 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 801 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 742 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 741 tcttcctctcc 731
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1125 Score = 172 bits (87), Expect = 7e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 920 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 861 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 860 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 801 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||| Sbjct: 800 tcgtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcc 741 Query: 479 tcttcttctcc 489 ||||| ||||| Sbjct: 740 tcttcctctcc 730
>gb|AF133118.1|AF133118 Oryza sativa nucleic acid binding protein (NBP) gene, complete cds Length = 5552 Score = 168 bits (85), Expect = 1e-38 Identities = 163/189 (86%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgt 360 |||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct: 5090 cctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgt 5031 Query: 361 gatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||||| Sbjct: 5030 gatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaactc 4971 Query: 421 atccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcctc 480 ||||| || |||| ||||||||||| |||||||| |||||||| | || |||||||| Sbjct: 4970 gtccttgccatcgttggttccacaggtcccacacaaagtgttgtcatggtcatcctcctc 4911 Query: 481 ttcttctcc 489 ||| ||||| Sbjct: 4910 ttcctctcc 4902
>gb|AY108533.1| Zea mays PCO147142 mRNA sequence Length = 1128 Score = 161 bits (81), Expect = 3e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 856 gccctcttgttgctgcaatctgggcatttgtagtgcttgatgtgctcagctcgtgcaggc 797 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 ||||||||||| || |||||||| ||||| |||||||| | || || || |||||||| Sbjct: 796 gtgatcttgacacacttcccatggtaccaccgctcgcaactatcacaacagatccagaat 737 Query: 419 tcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcc 478 || ||||| ||| | ||||||||||||| ||||| |||||||| || ||| ||||||| Sbjct: 736 tcgtccttgccgtcatttgttccacaggatccacataaggtgttatcacgcacttcctct 677 Query: 479 tcttc 483 ||||| Sbjct: 676 tcttc 672
>gb|AY103945.1| Zea mays PCO073257 mRNA sequence Length = 1241 Score = 153 bits (77), Expect = 7e-34 Identities = 155/181 (85%) Strand = Plus / Minus Query: 300 ccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcg 359 ||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 943 ccctcttgttggtgcagtctgggcacttgtactgcttgatatgctcggcccgagcgggcg 884 Query: 360 tgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaact 419 |||||||||| || ||||| || ||||| ||||||||| |||||||| |||||||||| Sbjct: 883 tgatcttgacacacttcccgtggtaccacttctcgcagttatcgcagcagatccagaact 824 Query: 420 catccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcct 479 ||||| ||| |||| || || ||||| ||||||| |||||||||| |||| ||| ||| Sbjct: 823 ggtccttgccgtcgttggtcccgcaggttccacacagggtgttgtcgtgctcctccgcct 764 Query: 480 c 480 | Sbjct: 763 c 763
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 143 bits (72), Expect = 6e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 294 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 353 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 74272 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 74213 Query: 354 caggcgtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatcc 413 |||| |||||||| ||||| || ||||| ||||| |||||||| | || || || |||| Sbjct: 74212 caggtgtgatcttcacgcactttccatggtaccaccgctcgcaactatcacaacagatcc 74153 Query: 414 agaactcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctctt 473 | |||||||| || || | ||||||||||| | || |||| ||||||||||||||| | Sbjct: 74152 aaaactcatctttgccatcatttgttccacaagatccgcacagggtgttgtcgcgctcct 74093 Query: 474 cctcctcttcttctccatagtcctcgcc 501 ||||||| || ||| |||| || ||||| Sbjct: 74092 cctcctcctcgtctgcatactcatcgcc 74065
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 143 bits (72), Expect = 6e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 294 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 353 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 20402527 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 20402468 Query: 354 caggcgtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatcc 413 |||| |||||||| ||||| || ||||| ||||| |||||||| | || || || |||| Sbjct: 20402467 caggtgtgatcttcacgcactttccatggtaccaccgctcgcaactatcacaacagatcc 20402408 Query: 414 agaactcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctctt 473 | |||||||| || || | ||||||||||| | || |||| ||||||||||||||| | Sbjct: 20402407 aaaactcatctttgccatcatttgttccacaagatccgcacagggtgttgtcgcgctcct 20402348 Query: 474 cctcctcttcttctccatagtcctcgcc 501 ||||||| || ||| |||| || ||||| Sbjct: 20402347 cctcctcctcgtctgcatactcatcgcc 20402320
>dbj|AK121400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M22, full insert sequence Length = 1114 Score = 143 bits (72), Expect = 6e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 294 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 353 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 896 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 837 Query: 354 caggcgtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatcc 413 |||| |||||||| ||||| || ||||| ||||| |||||||| | || || || |||| Sbjct: 836 caggtgtgatcttcacgcactttccatggtaccaccgctcgcaactatcacaacagatcc 777 Query: 414 agaactcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctctt 473 | |||||||| || || | ||||||||||| | || |||| ||||||||||||||| | Sbjct: 776 aaaactcatctttgccatcatttgttccacaagatccgcacagggtgttgtcgcgctcct 717 Query: 474 cctcctcttcttctccatagtcctcgcc 501 ||||||| || ||| |||| || ||||| Sbjct: 716 cctcctcctcgtctgcatactcatcgcc 689
>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full insert sequence Length = 2105 Score = 143 bits (72), Expect = 6e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 294 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 353 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1814 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 1755 Query: 354 caggcgtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatcc 413 |||| |||||||| ||||| || ||||| ||||| |||||||| | || || || |||| Sbjct: 1754 caggtgtgatcttcacgcactttccatggtaccaccgctcgcaactatcacaacagatcc 1695 Query: 414 agaactcatccttaccgccgtttgttccacaggtaccacacaaggtgttgtcgcgctctt 473 | |||||||| || || | ||||||||||| | || |||| ||||||||||||||| | Sbjct: 1694 aaaactcatctttgccatcatttgttccacaagatccgcacagggtgttgtcgcgctcct 1635 Query: 474 cctcctcttcttctccatagtcctcgcc 501 ||||||| || ||| |||| || ||||| Sbjct: 1634 cctcctcctcgtctgcatactcatcgcc 1607
>dbj|AK058498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F01, full insert sequence Length = 323 Score = 135 bits (68), Expect = 2e-28 Identities = 113/128 (88%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 136 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 77 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 |||||||||||||| |||||||||||||| ||||||||| ||||| || ||||||||| Sbjct: 76 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgcaacagatccagaac 17 Query: 419 tcatcctt 426 || ||||| Sbjct: 16 tcgtcctt 9
>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA sequence Length = 1300 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Minus Query: 307 gttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 366 |||| |||| || |||||| |||||||||||||||||| || || || ||||||||||| Sbjct: 862 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 803 Query: 367 gacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactcatcctt 426 |||||| || || || ||||| |||||||||||||||||| ||||||||||| ||||| Sbjct: 802 gacgcacttgccgtggtaccacttctcgcagttgtcgcagcagatccagaactcgtcctt 743 Query: 427 accgccgtttgttccacaggtaccacacaaggtgttgtcgcgctcttcctcctcttcttc 486 ||| |||| || || ||||| || |||| |||||||||| |||| |||||||| || || Sbjct: 742 gccgtcgttggtgccgcaggtcccgcacagggtgttgtcgtgctcctcctcctcgtcgtc 683 Query: 487 tccatagtcctcgcc 501 || | ||||||||| Sbjct: 682 cccctcgtcctcgcc 668
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 319 tgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccc 378 |||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||| || Sbjct: 82287 tgggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcc 82228 Query: 379 atgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 ||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 82227 atggaaccacttctcgcagatgtcgcagcaaatccagaactcatc 82183
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 319 tgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccc 378 |||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||| || Sbjct: 87793 tgggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcc 87852 Query: 379 atgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 ||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 87853 atggaaccacttctcgcagatgtcgcagcaaatccagaactcatc 87897
>ref|XM_470117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 813 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 754 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 753 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 702
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 34039640 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 34039699 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 34039700 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 34039751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 34130112 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 34130171 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 34130172 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 34130223
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 3452 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 3511 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 3512 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 3563
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 18051 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 17992 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 17991 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 17940
>dbj|AK103363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N11, full insert sequence Length = 1202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttga 368 |||||||||| |||||||||||||||||||||||||| || ||| || || ||| ||| Sbjct: 823 tgctgcagtcagggcacttgtagtgcttgatgtgctccgccttagccggggttatcctga 764 Query: 369 cgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||||||| || || |||| ||||| ||| ||||||| | ||||||||||| Sbjct: 763 cgcatttgccgtggaaccaccgctcacagatgtcgcacccgatccagaactc 712
>gb|AY104096.1| Zea mays PCO134301 mRNA sequence Length = 674 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 310 gctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgac 369 ||||||||| ||||||||||||||||| ||||| || ||| ||||| |||||| || Sbjct: 282 gctgcagtccgggcacttgtagtgctttatgtggtccgctttggcaggggtgatccgcac 223 Query: 370 gcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 ||| ||||| || |||| ||||||||| ||||||||| ||||||||||| Sbjct: 222 gcacttcccgtggaaccaccgctcgcagatgtcgcagccgatccagaactc 172
>ref|NM_122522.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G26210 mRNA, complete cds Length = 1488 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 891 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 832 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 831 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 772 Query: 419 tcatc 423 ||||| Sbjct: 771 tcatc 767
>ref|NM_122521.4| Arabidopsis thaliana binding AT5G26200 mRNA, complete cds Length = 1636 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 1435 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 1494 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 1495 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 1554 Query: 419 tcatc 423 ||||| Sbjct: 1555 tcatc 1559
>ref|XM_466276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 864 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 820
>ref|XM_506831.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.22 mRNA Length = 1213 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 876 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 832
>ref|XM_479105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1168 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 790 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 731 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 730 tggaaccacttctcgcagatgtcgcagcagatccagaactc 690
>gb|AC005965.1| Arabidopsis thaliana BAC T19G15, from chromosome V near 60.5 cM, complete sequence Length = 77036 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 14103 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 14162 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 14163 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 14222 Query: 419 tcatc 423 ||||| Sbjct: 14223 tcatc 14227
>ref|XM_472642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 759 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 715
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||||| |||||||||||||||||||||||||| Sbjct: 19983 tgctgcagttcgggcacttgtagtgcttgatgtgctc 19947 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tcgcagcaaatccagaactcatcct 425 |||||||| |||||||||||||||| Sbjct: 19891 tcgcagcagatccagaactcatcct 19867
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||||| |||||||||||||||||||||||||| Sbjct: 120671 tgctgcagttcgggcacttgtagtgcttgatgtgctc 120635 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tcgcagcaaatccagaactcatcct 425 |||||||| |||||||||||||||| Sbjct: 120579 tcgcagcagatccagaactcatcct 120555
>gb|BT024475.1| Arabidopsis thaliana At5g26210 mRNA, complete cds Length = 768 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 758 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 699 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 698 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 639 Query: 419 tcatc 423 ||||| Sbjct: 638 tcatc 634
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 125337 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 125396 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 125397 tggaaccacttctcgcagatgtcgcagcagatccagaactc 125437
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 22167176 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 22167132 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 cttcctcctcttcttctccat 491 ||||||||||||||||||||| Sbjct: 7105385 cttcctcctcttcttctccat 7105365 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 cttcctcctcttcttctccat 491 ||||||||||||||||||||| Sbjct: 6972738 cttcctcctcttcttctccat 6972718
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||||| |||||||||||||||||||||||||| Sbjct: 7696284 tgctgcagttcgggcacttgtagtgcttgatgtgctc 7696320 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 tcgcagcaaatccagaactcatcct 425 |||||||| |||||||||||||||| Sbjct: 7696376 tcgcagcagatccagaactcatcct 7696400
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 24963816 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 24963757 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 24963756 tggaaccacttctcgcagatgtcgcagcagatccagaactc 24963716 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtg 342 ||||||| || ||||||||||||||||| ||||| Sbjct: 7447102 tgctgcaatcagggcacttgtagtgctttatgtg 7447135
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 21436252 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 21436208 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 1872735 ctcttcctcctcttcttctcc 1872755 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 35360273 tcttcctcctcttcttctcc 35360254
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 147448 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 147389 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 147388 tggaaccacttctcgcagatgtcgcagcagatccagaactc 147348
>gb|AY087173.1| Arabidopsis thaliana clone 32443 mRNA, complete sequence Length = 1145 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 891 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 832 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 831 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 772 Query: 419 tcatc 423 ||||| Sbjct: 771 tcatc 767
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 31179 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 31135
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 4496 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 4437 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 4436 tggaaccacttctcgcagatgtcgcagcagatccagaactc 4396
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 96205 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 96161
>dbj|AK109447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H11, full insert sequence Length = 1220 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || || |||||||||||||| || || Sbjct: 842 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 783 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 || |||| ||||||| |||||||||| ||||||||||| Sbjct: 782 tggaaccacttctcgcagatgtcgcagcagatccagaactc 742
>dbj|AK105951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D01, full insert sequence Length = 1196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 864 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 820
>dbj|AK103215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M22, full insert sequence Length = 1199 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||||| |||||||||||||||||||||||||| Sbjct: 836 tgctgcagttcgggcacttgtagtgcttgatgtgctc 800 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tcgcagcaaatccagaactcatcct 425 |||||||| |||||||||||||||| Sbjct: 744 tcgcagcagatccagaactcatcct 720
>dbj|AK098960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072K02, full insert sequence Length = 1234 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 937 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 893
>dbj|AK073526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L10, full insert sequence Length = 1213 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 876 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 832
>gb|AF077407.1|F9D12 Arabidopsis thaliana BAC F9D12 Length = 112253 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 299 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 358 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| || || Sbjct: 2856 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctcttgctggt 2915 Query: 359 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaac 418 || ||||| || || || |||||| |||| ||| ||| ||| ||||||||||||||| Sbjct: 2916 gttatcttaacacactttccatgaaaccacatctcacagaggtcacagcaaatccagaac 2975 Query: 419 tcatc 423 ||||| Sbjct: 2976 tcatc 2980
>dbj|AK063657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B10, full insert sequence Length = 1249 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 953 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 909
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtgctc 345 ||||||||| |||||||||||||||||||||||||| Sbjct: 7766371 tgctgcagttcgggcacttgtagtgcttgatgtgctc 7766407 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 tcgcagcaaatccagaactcatcct 425 |||||||| |||||||||||||||| Sbjct: 7766463 tcgcagcagatccagaactcatcct 7766487
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 301 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 345 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 37037 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 36993
>gb|AY110398.1| Zea mays CL736_1 mRNA sequence Length = 1234 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 310 gctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgac 369 |||||||| || |||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 866 gctgcagttcggacacttgtagtgcttgatgtgttcggccttggcaggagtgatcttgac 807 Query: 370 gcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactcatcct 425 || || ||||| ||||| |||||| || ||||| |||||||||||||||| Sbjct: 806 acacttgccatggaaccaagtctcgcacgcatcacagcatatccagaactcatcct 751
>gb|AY087820.1| Arabidopsis thaliana clone 38635 mRNA, complete sequence Length = 1263 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 302 ctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtg 361 |||||||| ||||| |||||| ||||| ||||||||||| || ||| ||||| || Sbjct: 1015 ctcttgttactgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgtt 956 Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactca 421 ||||| || ||||| ||||| |||| ||| ||| |||||||||||||||||||||| Sbjct: 955 atcttcacacattttccatggaaccatttctcacaggcgtcgcagcaaatccagaactca 896 Query: 422 tc 423 || Sbjct: 895 tc 894
>gb|DQ010328.1| Solanum tuberosum putative alfin-like transcription factor (fin1) mRNA, complete cds Length = 747 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Minus Query: 323 cacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttcccatga 382 |||||||| |||||||| ||||| ||| ||| || |||||||| || ||||| ||||| Sbjct: 713 cacttgtactgcttgatatgctcagctttagctggagtgatcttcacacattttccatgg 654 Query: 383 taccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 |||| | |||||| | || |||||||||||||| ||||| Sbjct: 653 aaccatctctcgcaaatatcacagcaaatccagaattcatc 613
>gb|AY110004.1| Zea mays CL16185_1 mRNA sequence Length = 1230 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgca 372 ||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 198 gggcacttgtactgcttgatgtgctcggccttggccgccgtgatcttgacgca 250
>gb|BT020505.1| Arabidopsis thaliana At5g20510 gene, complete cds Length = 783 Score = 48.1 bits (24), Expect = 0.028 Identities = 84/104 (80%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||| ||||| |||| ||| || |||||||| || || | ||| Sbjct: 752 gggcacttgtaatgcttgatatgctccgctctagctggagtgatcttcacacactccccg 693 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 || |||| |||||| |||| |||||||||||||| ||||| Sbjct: 692 tggaaccatttctcgcacatgtcacagcaaatccagaattcatc 649
>ref|NM_122058.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G20510 mRNA, complete cds Length = 1229 Score = 48.1 bits (24), Expect = 0.028 Identities = 84/104 (80%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||| ||||| |||| ||| || |||||||| || || | ||| Sbjct: 799 gggcacttgtaatgcttgatatgctccgctctagctggagtgatcttcacacactccccg 740 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 || |||| |||||| |||| |||||||||||||| ||||| Sbjct: 739 tggaaccatttctcgcacatgtcacagcaaatccagaattcatc 696
>ref|NM_126302.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT2G02470 mRNA, complete cds Length = 1322 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 gtcgcagcaaatccagaactcatc 423 |||||||||||||||||||||||| Sbjct: 917 gtcgcagcaaatccagaactcatc 894
>ref|NM_122057.2| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron transporter/ thiol-disulfide exchange intermediate AT5G20500 mRNA, complete cds Length = 1064 Score = 48.1 bits (24), Expect = 0.028 Identities = 84/104 (80%) Strand = Plus / Plus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||| ||||| |||| ||| || |||||||| || || | ||| Sbjct: 819 gggcacttgtaatgcttgatatgctccgctctagctggagtgatcttcacacactccccg 878 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 || |||| |||||| |||| |||||||||||||| ||||| Sbjct: 879 tggaaccatttctcgcacatgtcacagcaaatccagaattcatc 922
>gb|BT015937.1| Arabidopsis thaliana At5g20510 mRNA, complete cds Length = 907 Score = 48.1 bits (24), Expect = 0.028 Identities = 84/104 (80%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||| ||||| |||| ||| || |||||||| || || | ||| Sbjct: 795 gggcacttgtaatgcttgatatgctccgctctagctggagtgatcttcacacactccccg 736 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 || |||| |||||| |||| |||||||||||||| ||||| Sbjct: 735 tggaaccatttctcgcacatgtcacagcaaatccagaattcatc 692
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 463 gtcgcgctcttcctcctcttcttc 486 |||||||||||||||||||||||| Sbjct: 126288 gtcgcgctcttcctcctcttcttc 126265
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 463 gtcgcgctcttcctcctcttcttc 486 |||||||||||||||||||||||| Sbjct: 125235 gtcgcgctcttcctcctcttcttc 125212
>gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F16 map CIC11A04, complete sequence Length = 74903 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 gtcgcagcaaatccagaactcatc 423 |||||||||||||||||||||||| Sbjct: 70117 gtcgcagcaaatccagaactcatc 70094
>gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genomic sequence, complete sequence Length = 98957 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 400 gtcgcagcaaatccagaactcatc 423 |||||||||||||||||||||||| Sbjct: 98459 gtcgcagcaaatccagaactcatc 98482
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 463 gtcgcgctcttcctcctcttcttc 486 |||||||||||||||||||||||| Sbjct: 125528 gtcgcgctcttcctcctcttcttc 125505
>gb|BT005004.1| Arabidopsis thaliana clone U20654 putative PHD-type zinc finger protein (At2g02470) mRNA, complete cds Length = 802 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 gtcgcagcaaatccagaactcatc 423 |||||||||||||||||||||||| Sbjct: 660 gtcgcagcaaatccagaactcatc 637
>gb|BT003905.1| Arabidopsis thaliana clone RAFL15-12-N24 (R20654) putative PHD-type zinc finger protein (At2g02470) mRNA, complete cds Length = 1185 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 gtcgcagcaaatccagaactcatc 423 |||||||||||||||||||||||| Sbjct: 775 gtcgcagcaaatccagaactcatc 752
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 48.1 bits (24), Expect = 0.028 Identities = 84/104 (80%) Strand = Plus / Plus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||| ||||| |||| ||| || |||||||| || || | ||| Sbjct: 42973 gggcacttgtaatgcttgatatgctccgctctagctggagtgatcttcacacactccccg 43032 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatc 423 || |||| |||||| |||| |||||||||||||| ||||| Sbjct: 43033 tggaaccatttctcgcacatgtcacagcaaatccagaattcatc 43076
>ref|NM_111955.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G11200 transcript variant AT3G11200.1 mRNA, complete cds Length = 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 838 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 780
>ref|NM_202551.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G11200 transcript variant AT3G11200.2 mRNA, complete cds Length = 1404 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 986 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 928
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 7654 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 7596
>gb|AY143832.1| Arabidopsis thaliana At3g11200/F11B9.12 mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 668 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 610
>gb|BT009050.1| Triticum aestivum clone wdk9n1.pk001.m5:fis, full insert mRNA sequence Length = 1147 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 366 ||||| |||||||||||||||||||| ||| ||||| |||||||| Sbjct: 832 gggcatttgtagtgcttgatgtgctcagctttggcaggggtgatctt 786
>ref|NM_079618.2| Drosophila melanogaster Suppressor of variegation 3-7 CG8599-RA (Su(var)3-7), mRNA Length = 5063 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatagtcctcg 499 |||||||||||||||||||| |||||| Sbjct: 2182 tcctcctcttcttctccatattcctcg 2156
>gb|AC007754.4|AC007754 Drosophila melanogaster, chromosome 3R, region 87E-87E, BAC clone BACR05K08, complete sequence Length = 188967 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatagtcctcg 499 |||||||||||||||||||| |||||| Sbjct: 86591 tcctcctcttcttctccatattcctcg 86565
>gb|AY058833.1| Arabidopsis thaliana At3g11200/F11B9.12 mRNA, complete cds Length = 1134 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 804 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 746
>emb|BX823096.1|CNS0A79Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 641 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 310 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 252
>emb|BX822406.1|CNS0A7CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 986 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 928
>emb|BX826146.1|CNS0A6H5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1017 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 764 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 706
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 45626 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 45684
>gb|AY085138.1| Arabidopsis thaliana clone 13297 mRNA, complete sequence Length = 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 362 atcttgacgcatttcccatgataccaacgctcgcagttgtcgcagcaaatccagaactc 420 |||||||||||||| ||||| |||||||| || || || ||||||||||||||||| Sbjct: 838 atcttgacgcattttccatggtaccaacgttcacaaacatcacagcaaatccagaactc 780
>gb|BT021939.1| Drosophila melanogaster RE27718 full insert cDNA Length = 4245 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatagtcctcg 499 |||||||||||||||||||| |||||| Sbjct: 2175 tcctcctcttcttctccatattcctcg 2149
>gb|AE003699.3| Drosophila melanogaster chromosome 3R, section 37 of 118 of the complete sequence Length = 208424 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatagtcctcg 499 |||||||||||||||||||| |||||| Sbjct: 103177 tcctcctcttcttctccatattcctcg 103151
>emb|X52187.1|DMSUVAR Drosophila melanogaster mRNA for suppressor of variegation protein 3-7 Length = 5052 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatagtcctcg 499 |||||||||||||||||||| |||||| Sbjct: 2163 tcctcctcttcttctccatattcctcg 2137
>ref|NM_186688.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtg 342 ||||||| || ||||||||||||||||| ||||| Sbjct: 784 tgctgcaatcagggcacttgtagtgctttatgtg 751
>gb|AY918932.1| Schoenoplectus americanus clone SCAM.02 microsatellite sequence Length = 442 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctc 345 ||||| |||||||||||||||||||| Sbjct: 284 gggcatttgtagtgcttgatgtgctc 259
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 321 ggcacttgtagtgcttgatgtgctcg 346 |||||||| ||||||||||||||||| Sbjct: 304 ggcacttggagtgcttgatgtgctcg 279
>gb|BT009102.1| Triticum aestivum clone wkm2n.pk004.d7:fis, full insert mRNA sequence Length = 1221 Score = 44.1 bits (22), Expect = 0.44 Identities = 85/106 (80%) Strand = Plus / Minus Query: 320 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccca 379 ||||||||||| |||||||||||||| || || |||||||||||||| || || || Sbjct: 889 gggcacttgtactgcttgatgtgctccgccttggccggcgtgatcttgacacacttgccg 830 Query: 380 tgataccaacgctcgcagttgtcgcagcaaatccagaactcatcct 425 || |||| |||||| ||||||||| ||||||||||| |||| Sbjct: 829 tggaaccacttctcgcacatgtcgcagccgatccagaactcgtcct 784
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 73 caacactactacaccaaccaaccaac 98 |||||| ||||||||||||||||||| Sbjct: 41458 caacaccactacaccaaccaaccaac 41483
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtg 342 ||||||| || ||||||||||||||||| ||||| Sbjct: 25416 tgctgcaatcagggcacttgtagtgctttatgtg 25449
>dbj|AK073637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048B22, full insert sequence Length = 1155 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtg 342 ||||||| || ||||||||||||||||| ||||| Sbjct: 784 tgctgcaatcagggcacttgtagtgctttatgtg 751
>dbj|AK063803.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F12, full insert sequence Length = 591 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 309 tgctgcagtctgggcacttgtagtgcttgatgtg 342 ||||||| || ||||||||||||||||| ||||| Sbjct: 220 tgctgcaatcagggcacttgtagtgctttatgtg 187
>gb|AY109203.1| Zea mays PCO130597 mRNA sequence Length = 1100 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcca 490 |||||||||||||||||||||| Sbjct: 774 ctcttcctcctcttcttctcca 753
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 321 ggcacttgtagtgcttgatgtgctcg 346 |||||||| ||||||||||||||||| Sbjct: 825655 ggcacttggagtgcttgatgtgctcg 825680
>gb|AC160016.2| Mus musculus BAC clone RP24-421D3 from chromosome 9, complete sequence Length = 186944 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 71357 ctcttcctcctcttcttctcc 71377
>ref|XM_507656.1| PREDICTED: Pan troglodytes similar to UPF2 regulator of nonsense transcripts homolog; regulator of nonsense transcripts 2; yeast Upf2p homolog (LOC450304), mRNA Length = 4608 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 4017 ctcttcctcctcttcttctcc 3997
>ref|XM_464042.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1955 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 43 ctcttcctcctcttcttctcc 63
>ref|XM_464043.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1965 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 44 ctcttcctcctcttcttctcc 64
>gb|AY553842.1| Lycopersicon esculentum nucleic acid-binding protein mRNA, complete cds Length = 1017 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 404 cagcaaatccagaactcatccttaccgccgtttgttccaca 444 |||| ||||||||||||||||| | ||| ||||||||||| Sbjct: 617 cagccaatccagaactcatcctcattgccatttgttccaca 577
>gb|AC102098.8| Mus musculus chromosome 7, clone RP23-49M22, complete sequence Length = 192099 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 31614 ctcttcctcctcttcttctcc 31594
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 99331 ctcttcctcctcttcttctcc 99351
>gb|AC113957.8| Mus musculus chromosome 15, clone RP23-452M1, complete sequence Length = 168824 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 17333 ctcttcctcctcttcttctcc 17313
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 999 ctcttcctcctcttcttctcc 979
>gb|AC116515.11| Mus musculus chromosome 7, clone RP24-331B9, complete sequence Length = 133179 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 111717 ctcttcctcctcttcttctcc 111697
>gb|AC157944.2| Mus musculus BAC clone RP23-456N8 from chromosome 15, complete sequence Length = 179092 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 78107 ctcttcctcctcttcttctcc 78087
>gb|AC133945.2| Mus musculus chromosome 18 clone RP24-146N1, complete sequence Length = 139630 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 102769 ctcttcctcctcttcttctcc 102749
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 8543 ctcttcctcctcttcttctcc 8523
>emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chromosome 14, complete sequence Length = 150382 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 111862 ctcttcctcctcttcttctcc 111882
>emb|AL670276.13| Mouse DNA sequence from clone RP23-115D21 on chromosome 4, complete sequence Length = 35472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3011 ctcttcctcctcttcttctcc 3031
>gb|AC127411.3| Mus musculus BAC clone RP23-60E24 from chromosome 5, complete sequence Length = 217636 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 200658 ctcttcctcctcttcttctcc 200678
>gb|AC115356.5| Mus musculus BAC clone RP23-47E9 from 15, complete sequence Length = 212177 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 204585 ctcttcctcctcttcttctcc 204565
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 118443 ctcttcctcctcttcttctcc 118423
>gb|AC110919.10| Mus musculus chromosome 15, clone RP23-216B8, complete sequence Length = 228930 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 32893 ctcttcctcctcttcttctcc 32913
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 46264 ctcttcctcctcttcttctcc 46284
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatag 493 ||||||||||||||||||||| Sbjct: 116305 tcctcctcttcttctccatag 116285
>emb|AL645617.9| Human DNA sequence from clone RP11-796C22 on chromosome 10 Contains part of the UPF2 gene for UPF2 regulator of nonsense transcripts homolog (yeast) (FLJ38872), complete sequence Length = 76287 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 14290 ctcttcctcctcttcttctcc 14310
>ref|NM_015542.2| Homo sapiens UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), transcript variant 2, mRNA Length = 5185 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3295 ctcttcctcctcttcttctcc 3275
>ref|NM_080599.1| Homo sapiens UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), transcript variant 1, mRNA Length = 5223 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3351 ctcttcctcctcttcttctcc 3331
>gb|AY248742.1| Lycopersicon esculentum omega-3 fatty acid desaturase gene, complete cds; nuclear gene for chloroplast product Length = 43170 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 404 cagcaaatccagaactcatccttaccgccgtttgttccaca 444 |||| ||||||||||||||||| | ||| ||||||||||| Sbjct: 34650 cagccaatccagaactcatcctcattgccatttgttccaca 34690
>emb|AL049536.5|HS205F14P Human DNA sequence from clone RP1-205F14P on chromosome 22q11.22-12.3, complete sequence Length = 35569 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 9722 ctcttcctcctcttcttctcc 9742
>emb|AL031407.3|HS436K10 Human DNA sequence from clone RP3-436K10 on chromosome 6p22.1-23, complete sequence Length = 165139 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 91768 ctcttcctcctcttcttctcc 91788
>gb|AC157558.8| Mus musculus chromosome 8, clone RP24-367D19, complete sequence Length = 142704 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 76317 ctcttcctcctcttcttctcc 76337
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 152171 ctcttcctcctcttcttctcc 152191
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 cttcctcctcttcttctccat 491 ||||||||||||||||||||| Sbjct: 135609 cttcctcctcttcttctccat 135589
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 cttcctcctcttcttctccat 491 ||||||||||||||||||||| Sbjct: 126576 cttcctcctcttcttctccat 126556
>emb|AL080198.1|HSM800722 Homo sapiens mRNA; cDNA DKFZp434D222 (from clone DKFZp434D222) Length = 3382 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 1497 ctcttcctcctcttcttctcc 1477
>emb|AL627348.12| Mouse DNA sequence from clone RP23-421L2 on chromosome 11 Contains part of the gene for a novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1 and a CpG island, complete sequence Length = 146061 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 88470 ctcttcctcctcttcttctcc 88450
>gb|AC008053.13| Homo sapiens chromosome 17, clone RP5-954K8, complete sequence Length = 110144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 27344 ctcttcctcctcttcttctcc 27364
>dbj|AK137290.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530097O18 product:unclassifiable, full insert sequence Length = 2532 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 1939 ctcttcctcctcttcttctcc 1959
>gb|AC109454.3| Homo sapiens chromosome 5 clone RP11-215P8, complete sequence Length = 142276 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 117516 ctcttcctcctcttcttctcc 117536
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 166809 ctcttcctcctcttcttctcc 166829
>gb|AC153020.5| Mus musculus BAC clone RP23-88P1 from chromosome 13, complete sequence Length = 200635 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 9444 ctcttcctcctcttcttctcc 9424
>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence Length = 211156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 62710 ctcttcctcctcttcttctcc 62690 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 62661 ctcttcctcctcttcttctcc 62641 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 62634 ctcttcctcctcttcttctcc 62614
>gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosome 13, complete sequence Length = 159755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 146188 ctcttcctcctcttcttctcc 146168
>gb|AC135178.13| Homo sapiens chromosome 17, clone RP11-849F2, complete sequence Length = 188340 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 84177 ctcttcctcctcttcttctcc 84157
>gb|AF318574.1|AF318574 Homo sapiens UPF2 (UPF2) mRNA, complete cds Length = 5195 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3297 ctcttcctcctcttcttctcc 3277
>dbj|AB049839.2| Macaca fascicularis brain cDNA, clone:QnpA-16595, similar to human UPF2 regulator of nonsense transcripts homolog, mRNA, NM_015542.2 Length = 2380 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 1472 ctcttcctcctcttcttctcc 1452
>gb|AY013249.1| Homo sapiens hUPF2 mRNA, complete cds Length = 3874 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3246 ctcttcctcctcttcttctcc 3226
>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence Length = 207184 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatag 493 ||||||||||||||||||||| Sbjct: 170224 tcctcctcttcttctccatag 170204
>gb|AF301013.1|AF301013 Homo sapiens regulator of nonsense transcripts 2 (RENT2) mRNA, complete cds Length = 5209 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3320 ctcttcctcctcttcttctcc 3300
>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence Length = 134457 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 caaccaacggtttaaaacacacaca 115 |||||||| |||||||||||||||| Sbjct: 49024 caaccaactgtttaaaacacacaca 49000
>gb|AC130329.8| Homo sapiens chromosome 17, clone RP13-348C17, complete sequence Length = 74378 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 28717 ctcttcctcctcttcttctcc 28697
>ref|XM_218173.3| PREDICTED: Rattus norvegicus PRP31 pre-mRNA processing factor 31 homolog (yeast) (predicted) (Prpf31_predicted), mRNA Length = 1508 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tcctcctcttcttctccatag 493 ||||||||||||||||||||| Sbjct: 94 tcctcctcttcttctccatag 74
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 12296 ctcttcctcctcttcttctcc 12316
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 109379 ctcttcctcctcttcttctcc 109399
>dbj|AK119583.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C05, full insert sequence Length = 1965 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 44 ctcttcctcctcttcttctcc 64
>ref|XM_554860.1| Anopheles gambiae str. PEST ENSANGP00000025583 (ENSANGG00000023883), partial mRNA Length = 3603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 2676 ctcttcctcctcttcttctcc 2656
>dbj|AK000764.1| Homo sapiens cDNA FLJ20757 fis, clone HEP01520 Length = 2031 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 158 ctcttcctcctcttcttctcc 138
>dbj|AK074375.1| Homo sapiens cDNA FLJ23795 fis, clone HEP22107 Length = 1983 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 90 ctcttcctcctcttcttctcc 70
>dbj|AK065605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033I23, full insert sequence Length = 1955 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 43 ctcttcctcctcttcttctcc 63
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aatgctaggccatatctgcag 207 ||||||||||||||||||||| Sbjct: 75263 aatgctaggccatatctgcag 75283
>emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chromosome 4, complete sequence Length = 236158 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 122359 ctcttcctcctcttcttctcc 122379
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 891551 ctcttcctcctcttcttctcc 891531
>gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromosome unknown, complete sequence Length = 185318 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ctgcagccttgctggtgcttt 279 ||||||||||||||||||||| Sbjct: 26934 ctgcagccttgctggtgcttt 26914
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 aatgctaggccatatctgcag 207 ||||||||||||||||||||| Sbjct: 24825 aatgctaggccatatctgcag 24805
>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete sequence Length = 196017 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 37108 ctcttcctcctcttcttctcc 37128
>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete sequence Length = 203613 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 169105 ctcttcctcctcttcttctcc 169085
>emb|AL627236.11| Mouse DNA sequence from clone RP23-384G12 on chromosome 4, complete sequence Length = 201752 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 146452 ctcttcctcctcttcttctcc 146472
>emb|AL772190.6| Mouse DNA sequence from clone RP23-124P7 on chromosome 2, complete sequence Length = 206240 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 18415 ctcttcctcctcttcttctcc 18395
>gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, complete sequence Length = 140911 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 45966 ctcttcctcctcttcttctcc 45986
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 30492 ctcttcctcctcttcttctcc 30472
>dbj|AB037829.1| Homo sapiens mRNA for KIAA1408 protein, partial cds Length = 5568 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctcc 489 ||||||||||||||||||||| Sbjct: 3696 ctcttcctcctcttcttctcc 3676
>gb|AC154102.15| Mus musculus chromosome 8, clone RP24-186O14, complete sequence Length = 171510 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 138852 tcttcctcctcttcttctcc 138833
>gb|AC121879.3| Mus musculus chromosome 19 clone RP24-132B24, complete sequence Length = 134662 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 115579 tcttcctcctcttcttctcc 115598
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 50794 ctcttcctcctcttcttctc 50813
>ref|XM_468462.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 30 tcttcctcctcttcttctcc 11
>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence Length = 184175 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 28093 ctcttcctcctcttcttctc 28112
>gb|BT017810.1| Zea mays clone EL01N0507A04.c mRNA sequence Length = 1011 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 305 ttgttgctgcagtctgggcacttgtagtgctt 336 |||| |||||| || ||||||||||||||||| Sbjct: 754 ttgtagctgcaatcagggcacttgtagtgctt 723
>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence Length = 138999 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 taggccatatctgcaggctg 211 |||||||||||||||||||| Sbjct: 66449 taggccatatctgcaggctg 66468
>gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M24, complete sequence Length = 148533 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttct 487 |||||||||||||||||||| Sbjct: 106696 gctcttcctcctcttcttct 106677
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gctcttcctcctcttcttct 487 |||||||||||||||||||| Sbjct: 804546 gctcttcctcctcttcttct 804565
>gb|AC112945.9| Mus musculus chromosome 15, clone RP23-382O21, complete sequence Length = 189335 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 56659 tcttcctcctcttcttctcc 56678
>ref|XM_460682.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F08272g) partial mRNA Length = 768 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aaacacacacaagtcaagag 124 |||||||||||||||||||| Sbjct: 322 aaacacacacaagtcaagag 341
>gb|AC118802.7| Rattus norvegicus 13 BAC CH230-72B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 239935 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 187633 tcttcctcctcttcttctcc 187614
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 5929 tcttcctcctcttcttctcc 5948
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctccata 492 ||||||||||||||||||| |||| Sbjct: 81443 ctcttcctcctcttcttcttcata 81466
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 227082 tcttcctcctcttcttctcc 227101
>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence Length = 216751 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 163801 tcttcctcctcttcttctcc 163820
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 56864 tcttcctcctcttcttctcc 56883
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 79732 ctcttcctcctcttcttctc 79713 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 78902 ctcttcctcctcttcttctc 78883
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 121347 ctcttcctcctcttcttctc 121328 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 120517 ctcttcctcctcttcttctc 120498
>gb|AC133451.14| Mus musculus chromosome 19, clone RP24-91H12, complete sequence Length = 184265 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 156588 ctcttcctcctcttcttctc 156569
>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence Length = 206377 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 agcaaatccagaactcatccttac 428 ||||||||||||| |||||||||| Sbjct: 195008 agcaaatccagaagtcatccttac 194985
>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence Length = 199356 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 agcaaatccagaactcatccttac 428 ||||||||||||| |||||||||| Sbjct: 166896 agcaaatccagaagtcatccttac 166919
>ref|XM_946549.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.4520) partial mRNA Length = 3765 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttct 487 |||||||||||||||||||| Sbjct: 712 gctcttcctcctcttcttct 693
>ref|XM_858153.1| PREDICTED: Canis familiaris similar to Mitochondrial carnitine/acylcarnitine carrier protein (Carnitine/acylcarnitine translocase) (CAC), transcript variant 7 (LOC484774), mRNA Length = 4645 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 254 tcttcctcctcttcttctcc 235
>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete sequence Length = 230648 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aaacacacacaagtcaagag 124 |||||||||||||||||||| Sbjct: 128623 aaacacacacaagtcaagag 128642
>emb|CT025568.7| Mouse DNA sequence from clone RP23-374L19 on chromosome 9, complete sequence Length = 183916 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 34836 tcttcctcctcttcttctcc 34855
>gb|AC140436.3| Mus musculus BAC clone RP23-85O2 from chromosome 9, complete sequence Length = 142560 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctccata 492 ||||||||||||||||||| |||| Sbjct: 3991 ctcttcctcctcttcttcttcata 4014
>gb|AC124352.2| Mus musculus BAC clone RP24-477C23 from chromosome 9, complete sequence Length = 177886 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctccata 492 ||||||||||||||||||| |||| Sbjct: 39600 ctcttcctcctcttcttcttcata 39623
>gb|AC121809.3| Mus musculus BAC clone RP23-451B23 from chromosome 8, complete sequence Length = 192626 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 87100 ctcttcctcctcttcttctc 87119
>emb|Z93373.1|CEC01B9 Caenorhabditis elegans Cosmid C01B9, complete sequence Length = 25233 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cgctcttcctcctcttcttc 486 |||||||||||||||||||| Sbjct: 18315 cgctcttcctcctcttcttc 18334
>emb|CR715132.2|CNS0GEQW Tetraodon nigroviridis full-length cDNA Length = 891 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttctccat 491 |||||||||| ||||||||||||| Sbjct: 311 gctcttcctcatcttcttctccat 288
>emb|CR711287.2|CNS0GBS3 Tetraodon nigroviridis full-length cDNA Length = 881 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttctccat 491 |||||||||| ||||||||||||| Sbjct: 315 gctcttcctcatcttcttctccat 292
>emb|CR708621.2|CNS0G9Q1 Tetraodon nigroviridis full-length cDNA Length = 881 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttctccat 491 |||||||||| ||||||||||||| Sbjct: 315 gctcttcctcatcttcttctccat 292
>emb|CR705732.2|CNS0G7HS Tetraodon nigroviridis full-length cDNA Length = 874 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 gctcttcctcctcttcttctccat 491 |||||||||| ||||||||||||| Sbjct: 294 gctcttcctcatcttcttctccat 271
>gb|AC073346.12| Homo sapiens BAC clone RP11-736E3 from 7, complete sequence Length = 180651 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 93499 tcttcctcctcttcttctcc 93518
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 38834 tcttcctcctcttcttctcc 38853
>ref|XM_500761.1| Yarrowia lipolytica CLIB122, YALI0B11462g predicted mRNA Length = 4251 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cctcttcttctccatagtcc 496 |||||||||||||||||||| Sbjct: 3043 cctcttcttctccatagtcc 3024
>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence Length = 175014 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 taggccatatctgcaggctg 211 |||||||||||||||||||| Sbjct: 50374 taggccatatctgcaggctg 50393
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 taggccatatctgcaggctg 211 |||||||||||||||||||| Sbjct: 28372 taggccatatctgcaggctg 28353
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ccatatctgcaggctgcggc 215 |||||||||||||||||||| Sbjct: 93890 ccatatctgcaggctgcggc 93909
>gb|AC109707.5| Rattus norvegicus 13 BAC CH230-157O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 205150 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 152593 ctcttcctcctcttcttctc 152574
>gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 216192 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 74245 tcttcctcctcttcttctcc 74226
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 76138 ctcttcctcctcttcttctc 76119
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 aaacacacacaagtcaagag 124 |||||||||||||||||||| Sbjct: 660591 aaacacacacaagtcaagag 660610
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctccata 492 ||||||||||||||||||| |||| Sbjct: 164648 ctcttcctcctcttcttcttcata 164625
>emb|AL049559.2|SPCC1450 S.pombe chromosome III cosmid c1450 Length = 47381 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ttcctcctcttcttctccat 491 |||||||||||||||||||| Sbjct: 4991 ttcctcctcttcttctccat 4972
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 77510 ctcttcctcctcttcttctc 77491
>emb|AL669968.10| Mouse DNA sequence from clone RP23-475F22 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, complete sequence Length = 167170 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 87598 tcttcctcctcttcttctcc 87617
>emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chromosome 11 Contains the Elac2 gene for elaC homolog 2 (E. coli), a novel gene, a peroxiredoxin 6 (Prdx6) pseudogene, a novel gene (1700086D15Rik), a novel pseudogene, and two CpG islands, complete sequence Length = 196566 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 144369 tcttcctcctcttcttctcc 144388 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 144298 tcttcctcctcttcttctcc 144317
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 10634 ctcttcctcctcttcttctc 10653
>gb|AC154755.2| Mus musculus BAC clone RP24-406B22 from chromosome 13, complete sequence Length = 180363 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 93143 ctcttcctcctcttcttctc 93162
>gb|AC118003.21| Mus musculus chromosome 5, clone RP23-146G20, complete sequence Length = 176116 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 124329 ctcttcctcctcttcttctc 124348
>dbj|AK133310.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932432G05 product:Ca<2+>dependent activator protein for secretion, full insert sequence Length = 3661 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 165 tcttcctcctcttcttctcc 184
>gb|AC015804.14| Homo sapiens chromosome 17, clone RP11-637C24, complete sequence Length = 200452 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 75191 ctcttcctcctcttcttctc 75210
>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone BACR27M12, complete sequence Length = 157766 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 accaaccaacggtttaaaac 108 |||||||||||||||||||| Sbjct: 13702 accaaccaacggtttaaaac 13721
>gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complete sequence Length = 236486 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 209673 tcttcctcctcttcttctcc 209654
>gb|DP000036.1| Papio anubis target 106 genomic scaffold Length = 492848 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 433041 tcttcctcctcttcttctcc 433060
>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1, complete sequence Length = 210511 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ggtttaaaacacacacaagt 118 |||||||||||||||||||| Sbjct: 148395 ggtttaaaacacacacaagt 148414
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence Length = 213367 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 61981 tcttcctcctcttcttctcc 61962
>gb|AC159280.2| Mus musculus BAC clone RP23-347A2 from chromosome 13, complete sequence Length = 200540 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 32849 tcttcctcctcttcttctcc 32868
>gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosome 9, complete sequence Length = 191880 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 139943 tcttcctcctcttcttctcc 139962
>ref|NM_001023292.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC1450.03), partial mRNA Length = 723 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 ttcctcctcttcttctccat 491 |||||||||||||||||||| Sbjct: 417 ttcctcctcttcttctccat 398
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 accaaccaacggtttaaaac 108 |||||||||||||||||||| Sbjct: 119894 accaaccaacggtttaaaac 119913
>ref|XM_392003.2| PREDICTED: Apis mellifera similar to CG32466-PB, isoform B (LOC408455), mRNA Length = 1599 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 cgctcttcctcctcttcttc 486 |||||||||||||||||||| Sbjct: 244 cgctcttcctcctcttcttc 225
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gctcttcctcctcttcttct 487 |||||||||||||||||||| Sbjct: 23380045 gctcttcctcctcttcttct 23380064
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 69257 tcttcctcctcttcttctcc 69238
>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete sequence Length = 211647 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 122281 tcttcctcctcttcttctcc 122262
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ttcctcctcttcttctccat 491 |||||||||||||||||||| Sbjct: 139792 ttcctcctcttcttctccat 139811
>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence Length = 167631 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 157060 tcttcctcctcttcttctcc 157041
>gb|L07291.1|ALFNABP Alfalfa nucleic acid binding protein (alfin-1) mRNA, complete cds Length = 904 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 311 ctgcagtctgggcacttgtagtgcttgatgtg 342 |||||| | ||||||||||| ||||||||||| Sbjct: 779 ctgcagccagggcacttgtattgcttgatgtg 748
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete sequence Length = 87575 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 ctcttcctcctcttcttctccata 492 |||||| ||||||||||||||||| Sbjct: 57994 ctcttcttcctcttcttctccata 58017
>gb|AY196552.1| Clarias sp. LO-2003 clone U345 microsatellite sequence Length = 345 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 ctcttcctcctcttcttctc 488 |||||||||||||||||||| Sbjct: 153 ctcttcctcctcttcttctc 134
>gb|AF400187.1| Spodoptera frugiperda ribosomal protein L21 mRNA, complete cds Length = 562 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcacttgtagtgcttgatgtgctc 345 ||||||| |||||||||||||||| Sbjct: 345 gcacttggagtgcttgatgtgctc 322
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ctcctcttcttctccatagt 494 |||||||||||||||||||| Sbjct: 75256 ctcctcttcttctccatagt 75275
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 53465 tcttcctcctcttcttctcc 53446
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the complete sequence Length = 350029 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cgctcttcctcctcttcttc 486 |||||||||||||||||||| Sbjct: 249526 cgctcttcctcctcttcttc 249545
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 161850 tcttcctcctcttcttctcc 161831
>gb|AY855162.1| Macaca mulatta RPGR mRNA, partial cds Length = 1684 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 482 tcttcctcctcttcttctcc 463
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 20821 tcttcctcctcttcttctcc 20802
>dbj|AK122065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115L18, full insert sequence Length = 2058 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 30 tcttcctcctcttcttctcc 11
>gb|AC155925.2| Mus musculus BAC clone RP24-248C21 from 9, complete sequence Length = 171521 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 132881 tcttcctcctcttcttctcc 132900
>gb|AC154250.2| Mus musculus BAC clone RP24-193A14 from 14, complete sequence Length = 146388 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcttcctcctcttcttctcc 489 |||||||||||||||||||| Sbjct: 119518 tcttcctcctcttcttctcc 119537
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete sequence Length = 266205 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 accaaccaacggtttaaaac 108 |||||||||||||||||||| Sbjct: 251466 accaaccaacggtttaaaac 251485 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,304,039 Number of Sequences: 3902068 Number of extensions: 4304039 Number of successful extensions: 185512 Number of sequences better than 10.0: 268 Number of HSP's better than 10.0 without gapping: 272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 183850 Number of HSP's gapped (non-prelim): 1625 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
