>EGF_RAT (P07522) Pro-epidermal growth factor precursor (EGF) [Contains:|
            Epidermal growth factor]
          Length = 1133

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 350  CTSAAGAPADHGATPALAGTDGALWVSGASMG 255
            C SA G P     +P+L G DG  WV  ++ G
Sbjct: 947  CPSAPGLPCPDSTSPSLLGKDGCHWVRNSNTG 978

>CRTX_PANAN (P21686) Zeaxanthin glucosyl transferase (EC 2.4.1.-)|
          Length = 431

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 139 SVCTGVHPPSSISKGLHMFVHPLQPT*LLL 228
           SV T  HPP ++++ LH+  HPL P+ L L
Sbjct: 53  SVGTDSHPPGALTRVLHLAAHPLGPSMLKL 82

>KCMB3_HUMAN (Q9NPA1) Calcium-activated potassium channel beta subunit 3|
           (Calcium-activated potassium channel, subfamily M, beta
           subunit 3) (Maxi K channel beta subunit 3) (BK channel
           beta subunit 3) (Slo-beta 3) (K(VCA)beta 3)
           (Charybdotoxin receptor bet
          Length = 279

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -2

Query: 374 PTSRSARPCTSAAGAPAD-HGATPALAGTDGALWVSGASMGLSLGRAHLGSSNHVGWRG* 198
           P S   R    + G P D H   P+ AG D A+ +  A MG S+    L           
Sbjct: 27  PASGKKRETDYSDGDPLDVHKRLPSSAGEDRAVMLGFAMMGFSVLMFFLLG--------- 77

Query: 197 TNMCKP----LEIEDGGCTPVHTD 138
           T + KP    ++ E+  CT +HTD
Sbjct: 78  TTILKPFMLSIQREESTCTAIHTD 101

>RPN1_SCHPO (P87048) 26S proteasome regulatory subunit rpn1 (Proteasome|
           non-ATPase subunit mts4) (19S regulatory cap region of
           26S protease subunit 2)
          Length = 891

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 138 ICMYRSTSTILYFQRFAHVCSPSPTN 215
           IC Y  T  +L+ Q+  H+CS  P++
Sbjct: 596 ICSYAGTGNVLHIQKLLHICSEPPSD 621

>PUM2_MOUSE (Q80U58) Pumilio homolog 2|
          Length = 1066

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +3

Query: 174 FQRFAHVCSPSPTNMIAATQVRPAQAQAHRGPTNPQRSIRPREGRCG 314
           FQ+ A   + +  N  AA+Q +P Q Q  R P   QR I P +G+ G
Sbjct: 357 FQQQAAAAASNTANQQAASQAQPGQQQVLR-PGAGQRPITPSQGQQG 402

>SALL3_MOUSE (Q62255) Sal-like protein 3 (Spalt-like protein 3) (MSal)|
           (Fragment)
          Length = 1323

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 374 PTSRSARPCTSAAGAPADHGATPALA--GTDGALWVSGASMG 255
           P S ++ PC S + AP D GA PA +     GA+  + +++G
Sbjct: 269 PASGTSTPCCSTSAAPPDSGAHPACSTGPAPGAVAAASSTVG 310

>TXND2_HUMAN (Q86VQ3) Thioredoxin domain-containing protein 2|
           (Spermatid-specific thioredoxin-1) (Sptrx-1)
          Length = 553

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 219 IAATQVRPAQAQAHRGPTNPQRSIRPREG 305
           IA T V+P+Q +    P +P+ +I+P+EG
Sbjct: 224 IAKTSVKPSQPKESDIPKSPEETIQPKEG 252

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = +3

Query: 45  MVKSACQLSLILAEIFPSSN*LHEICT*NTSICMYRSTSTILYFQRFAHVCSPSPTNMIA 224
           ++ S+   SL+ +  F SS+ +    T +TSI    STS+++         S S T+  +
Sbjct: 672 VISSSVTSSLVTSSSFISSSVISSSTTTSTSIFSESSTSSVIPTSSSTSGSSESKTSSAS 731

Query: 225 ATQVRPA-QAQAHRGPTNPQRSIRP 296
           ++    +  +++ + PTN   S+ P
Sbjct: 732 SSSSSSSISSESPKSPTNSSSSLPP 756

>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 2 (SWI/SNF complex 170
            kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/60 (38%), Positives = 24/60 (40%)
 Frame = -2

Query: 374  PTSRSARPCTSAAGAPADHGATPALAGTDGALWVSGASMGLSLGRAHLGSSNHVGWRG*T 195
            P      P T AAG PA HG   A A    A   SGA  G       LG S  +G  G T
Sbjct: 966  PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPG------SLGPSEQIGQAGST 1019

>ALS3_CANAL (O74623) Agglutinin-like protein 3 precursor|
          Length = 1119

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 336 WGPS*SRRHTGPRGDGWSAVG*WGLDGLELGPG 238
           W  + +  + GP    W+AV  W LDG    PG
Sbjct: 32  WSNAATYNYKGPGTPTWNAVLGWSLDGTSASPG 64

>LOXL4_BOVIN (Q8MJ24) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 4)
          Length = 757

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -2

Query: 269 GASMGLSLGRAHLGSSNHVGWRG*TNMCKPLEIEDGGCTPVHTDASVSC 123
           GA +G +LG  HL      G+    + C  LE    GC     DA+V C
Sbjct: 364 GAQLGQALGPIHLSEVRCRGYERTLSDCPSLEGSQNGCQH-DNDAAVRC 411

>ALS2_CANAL (O74657) Agglutinin-like protein 2 precursor (Fragment)|
          Length = 468

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 336 WGPS*SRRHTGPRGDGWSAVG*WGLDGLELGPG 238
           W  + +  + GP    W+AV  W LDG    PG
Sbjct: 32  WTRAGNYAYKGPNRPTWNAVLGWSLDGTSANPG 64

>P66B_MOUSE (Q8VHR5) Transcriptional repressor p66 beta (p66/p68) (GATA zinc|
           finger domain-containing protein 2B)
          Length = 594

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +3

Query: 240 PAQAQAHRGPTNPQRSIRPREGRCGAVISWGPSS*GTWPCGAT 368
           PAQ Q  RGP  P   +R         IS+ P S  + PC  T
Sbjct: 271 PAQLQGQRGPPKP-GIVRTTTPNMNPAISYQPQSSSSVPCQRT 312

>LOXL4_HUMAN (Q96JB6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 4) (Lysyl oxidase-related protein
           C)
          Length = 756

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -2

Query: 269 GASMGLSLGRAHLGSSNHVGWRG*TNMCKPLEIEDGGCTPVHTDASVSC 123
           GA +G  LG  HL      G+    + C  LE    GC     DA+V C
Sbjct: 363 GARLGQGLGPIHLSEVRCRGYERTLSDCPALEGSQNGCQH-ENDAAVRC 410

>LOXL4_MOUSE (Q924C6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 4) (Lysyl oxidase-related protein
           C)
          Length = 757

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -2

Query: 269 GASMGLSLGRAHLGSSNHVGWRG*TNMCKPLEIEDGGCTPVHTDASVSC 123
           GA +G  LG  HL      G+      C  LE    GC   + DA+V C
Sbjct: 364 GAQLGQGLGPIHLSEVRCRGYERTLGDCLALEGSQNGCQHAN-DAAVRC 411

>ISPDF_SILPO (Q5LRN5) IspD/ispF bifunctional enzyme [Includes:|
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT);
           2-C-methyl-D-erythritol 2,4-cyclod
          Length = 377

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
 Frame = -2

Query: 359 ARPCTSAA--GAPAD-----HGATPALAGTDGALWVSGASM 258
           ARPC SAA  GA  D      GA P LA TD ALW     +
Sbjct: 102 ARPCVSAATIGAVLDALDAHPGAAPGLAVTD-ALWTGAEGL 141

>PKP4_HUMAN (Q99569) Plakophilin-4 (p0071)|
          Length = 1211

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 369 ESLRKAMYLSCWGPS*SRRHTGPRGDGWSAVG*WGLDGLELGP 241
           ES  K    SCWG    ++   P+ D W  VG   + GL   P
Sbjct: 775 ESPSKDSEPSCWGKKKKKKKRTPQEDQWDGVG--PIPGLSKSP 815

>MSA2_PLAFZ (Q03645) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 300

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
 Frame = -2

Query: 344 SAAGAPADHGATPALAGTDGALWVSGASMGLSLGRAHLGSSNHVGWRG*TNMCKP-LEIE 168
           S AGA A  GA        GA+  SGA      G   +  S  V   G  N   P  + E
Sbjct: 62  SGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAVAGSGAGNGANPGADAE 121

Query: 167 DGGCTPVHTDASVS 126
            G  TP  T  + +
Sbjct: 122 RGPSTPATTTTTTT 135

>PKP4_MOUSE (Q68FH0) Plakophilin-4 (Armadillo-related protein)|
          Length = 1190

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 369 ESLRKAMYLSCWGPS*SRRHTGPRGDGWSAVG*WGLDGLELGP 241
           ES  K    SCWG    ++   P+ D W  VG   + GL   P
Sbjct: 774 ESPSKDSEPSCWGKKKKKKKRTPQEDQWDGVG--PIPGLSKSP 814


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,811,540
Number of Sequences: 219361
Number of extensions: 1219423
Number of successful extensions: 3467
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)