>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +1

Query: 397 SHLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHHQLIQRGPSS 537
           SH H  HH   +HH  H Q H HQQ Q  +T  +  H  L   G S+
Sbjct: 300 SHHHQPHHHHHHHHH-HHQHHNHQQQQQQQTSLSQGHASLTVAGGSA 345

>GSH2_MOUSE (P31316) Homeobox protein GSH-2|
          Length = 305

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +1

Query: 397 SHLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLA 495
           SH H  HHP Q+HH      H HQ  QPG   A
Sbjct: 123 SHAHHHHHPPQHHH------HHHQPQQPGSAAA 149

>GSH2_HUMAN (Q9BZM3) Homeobox protein GSH-2|
          Length = 304

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 397 SHLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLA 495
           +H H  HHP Q+HH      H HQ  QPG   A
Sbjct: 123 NHAHHHHHPPQHHH------HHHQPQQPGSAAA 149

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHH 510
           H H  HH   +HH PH   H H           G HH
Sbjct: 200 HHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHH 236



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHH 510
           H H  HH   +HH PH   H H           G HH
Sbjct: 190 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHH 226



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGH 465
           H H  HH   +HH PH   H H
Sbjct: 180 HHHAPHHHHHHHHAPHHHHHHH 201



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGH 465
           H H  HH   +HH PH   H H
Sbjct: 170 HHHAPHHHHHHHHAPHHHHHHH 191



 Score = 30.0 bits (66), Expect = 4.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 406 HLVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHH 510
           H  HH + +HH PH   H H    P      G HH
Sbjct: 86  HEPHHEEHHHHHPHPH-HHHHHHPPHHHHHLGHHH 119

>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)|
           (Transcription factor BF-2) (Brain factor 2) (BF2)
           (HFK2)
          Length = 469

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
 Frame = +1

Query: 394 ASH-LHLVHHPQQYHHTPHRQ*H----------GHQQFQPGRTLATGMHHQLIQRGPSSC 540
           ASH  H  HHPQ +HH  H   H            QQ QP      G   +  +RGPSSC
Sbjct: 35  ASHGHHNSHHPQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPRRGARRRR-RRGPSSC 93

>CUT_DROME (P10180) Homeobox protein cut|
          Length = 2175

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 415 HHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHHQLIQRGPSS 537
           HH QQ HH   +Q H HQQ    +      HH  +Q+ P+S
Sbjct: 665 HHQQQQHH---QQQHQHQQQHHQQQHLHQQHHHHLQQQPNS 702

>MTPB_ARATH (Q6DBM8) Metal tolerance protein B (AtMTPb) (AtMTP4)|
          Length = 375

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 379 LMVSWASHLHLVHHPQQYHHTPHRQ*HGHQ 468
           +MV W  H H  HH   +HH  H   H HQ
Sbjct: 175 VMVLWLGHNHSHHHHDHHHH-HHNHKHQHQ 203

>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)|
            (Protein bifid)
          Length = 972

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +1

Query: 394  ASHLH--LVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMH 507
            A H H    HH QQ H + H+Q H  Q  QP     T +H
Sbjct: 921  AQHHHHTQAHHQQQQHQSHHQQQHHQQPAQPHPHHQTHLH 960

>FIBP_ADE07 (P15141) Fiber protein (pIV)|
          Length = 343

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 249 NYYSSSCYVVKKDHSVFPIDL 311
           NY   +CY    DH+ FPID+
Sbjct: 271 NYIYGTCYYTASDHTAFPIDI 291

>HMH2_DROME (P10035) Homeobox protein H2.0|
          Length = 418

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGHQQFQP 480
           H H     QQ+HH  H   H HQQ +P
Sbjct: 189 HQHQKQQHQQHHHHQHHPKHLHQQHKP 215

>MEOX2_HUMAN (P50222) Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth|
           arrest-specific homeobox)
          Length = 304

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 415 HHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHHQLIQRGPSS 537
           HH   +HH  H   H HQQ Q  + L T  H   +   PS+
Sbjct: 64  HHRGHHHHHHHHHHHHHQQ-QQHQALQTNWHLPQMSSPPSA 103

>ADY4_YEAST (Q05955) Accumulates dyads protein 4|
          Length = 493

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 139 NECKKNLLIHHHQTHQPRFPRIVNSKQET 225
           N+C ++L  +H +T+Q R PRI+  K +T
Sbjct: 414 NDCSESLDDYHPRTYQFRHPRIIIDKMKT 442

>DTX_DROME (Q23985) Protein deltex|
          Length = 738

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 400 HLHLVHHPQQYHHTPHRQ*HGHQQFQPGRTLATGMHHQLIQRGP 531
           H H     QQ+HH   +Q   HQQ Q  +     +HHQ   R P
Sbjct: 268 HQHQQQQQQQHHHQHQQQ--QHQQQQQHQMQHHQIHHQTAPRKP 309

>MEPE_HUMAN (Q9NQ76) Matrix extracellular phosphoglycoprotein precursor|
           (Osteoblast/osteocyte factor 45) (OF45)
          Length = 525

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 397 SHLHLVHHPQQYHHTPHRQ 453
           SH +++ H ++YH+ PHRQ
Sbjct: 458 SHENIITHGRKYHYVPHRQ 476


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,555,131
Number of Sequences: 219361
Number of extensions: 980693
Number of successful extensions: 3171
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3005
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)