ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19k04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195751.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0008A05.1), mRNA Length = 824 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 589 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 530 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 529 gaccgaacccttccgacga 511 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 371 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 312 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 311 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 252 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 251 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 192 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 191 atcaggtcgccgga 178
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 44265 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 44206 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 44205 gaccgaacccttccgacga 44187 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 44047 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 43988 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 43987 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 43928 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 43927 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 43868 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 43867 atcaggtcgccgga 43854
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 94730 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 94671 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 94670 gaccgaacccttccgacga 94652 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 94512 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 94453 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 94452 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 94393 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 94392 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 94333 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 94332 atcaggtcgccgga 94319
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 8839658 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 8839599 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 8839598 gaccgaacccttccgacga 8839580 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 8839440 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 8839381 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 8839380 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 8839321 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 8839320 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 8839261 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 8839260 atcaggtcgccgga 8839247
>dbj|AK104034.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G07, full insert sequence Length = 751 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 518 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 459 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 458 gaccgaacccttccgacga 440 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 300 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 241 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 240 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 181 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 180 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 121 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 120 atcaggtcgccgga 107
>dbj|AK071458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092O07, full insert sequence Length = 750 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 517 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 458 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 457 gaccgaacccttccgacga 439 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 299 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 240 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 239 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 180 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 179 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 120 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 119 atcaggtcgccgga 106
>dbj|AK070152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043A18, full insert sequence Length = 750 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 517 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 458 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 457 gaccgaacccttccgacga 439 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 299 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 240 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 239 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 180 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 179 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 120 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 119 atcaggtcgccgga 106
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 155 tctcctccccgtcacccttcttccctgacagcgatgcagcccccttcatgacgtcgtcga 214 ||||||||||| | ||||||||| | |||||| | |||||||||||||||||||||| Sbjct: 8844797 tctcctccccgccgcccttcttctccatcagcgactcggcccccttcatgacgtcgtcga 8844738 Query: 215 gaccgaacccgtcggacga 233 |||||||||| || ||||| Sbjct: 8844737 gaccgaacccttccgacga 8844719 Score = 60.0 bits (30), Expect = 9e-06 Identities = 153/194 (78%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||| |||| ||||| |||| |||||| || ||||||||||| || ||||||||||| Sbjct: 8844579 aggtacccctccgccttgtcgatgtactgcccgaccggcttgtcgtcgagcttgccgtag 8844520 Query: 421 ttggcggcggagtccaggatatcggcggaggcggcggctaccttttccttgtcgatgccc 480 ||| || |||| ||| | || |||| |||| |||| |||| | |||||||| |||| Sbjct: 8844519 gtggacgccgagtgcagcaggtccgcggcggcgccggcgacctccttcttgtcgacgccc 8844460 Query: 481 tcgacgctcttcttctcgtaggctgtcctggcggcctccgcgaccagcttgctgctggac 540 || |||||||||| || | | | | | ||| ||||||||||||| ||||| ||| | | Sbjct: 8844459 tccacgctcttctgctggaacaccgacatggtcgcctccgcgaccaccttgccgctcgcc 8844400 Query: 541 atcaggtccccgga 554 |||||||| ||||| Sbjct: 8844399 atcaggtcgccgga 8844386
>gb|AY596576.1| Saccharum officinarum clone SCCCLR1065E11, complete sequence Length = 850 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 358 ttcaggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccg 417 |||||||| ||||||||||||||| |||||| || ||||||||||||| | ||||||| Sbjct: 365 ttcaggtagccctcggccttctcgatgtactgcccggccggcttgtcctcgaacttgccg 306 Query: 418 tac 420 ||| Sbjct: 305 tac 303 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 510 ggcggcctccgcgaccagcttgctgctgga 539 ||||||||||||||||||||||| |||||| Sbjct: 213 ggcggcctccgcgaccagcttgccgctgga 184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||||||||||||||||||||||| | ||| | |||||| | || |||||||||||| Sbjct: 5744206 aggtactcctcggccttctcgaggtagttgccagcgggcttgccgtcgagcttgccgtac 5744265 Query: 421 ttggcggcgg 430 | || ||||| Sbjct: 5744266 tgggaggcgg 5744275 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctccccgtc 167 |||||||||||||||| |||| |||||||||| Sbjct: 12321068 gccgccgccgccgctccgcttcgcctccccgtc 12321036 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 33288896 gccgccgccgccgc-ctccttctcctcc 33288922 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 27545553 gtgcaggcgcaggcgctggc 27545572
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||||||||||||||||||||||| | ||| | |||||| | || |||||||||||| Sbjct: 86965 aggtactcctcggccttctcgaggtagttgccagcgggcttgccgtcgagcttgccgtac 86906 Query: 421 ttggcggcgg 430 | || ||||| Sbjct: 86905 tgggaggcgg 86896
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 361 aggtactcctcggccttctcgaggtactggcccaccggcttgtcctctagcttgccgtac 420 |||||||||||||||||||||||||| | ||| | |||||| | || |||||||||||| Sbjct: 5743419 aggtactcctcggccttctcgaggtagttgccagcgggcttgccgtcgagcttgccgtac 5743478 Query: 421 ttggcggcgg 430 | || ||||| Sbjct: 5743479 tgggaggcgg 5743488 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctccccgtc 167 |||||||||||||||| |||| |||||||||| Sbjct: 12317831 gccgccgccgccgctccgcttcgcctccccgtc 12317799 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 33379406 gccgccgccgccgc-ctccttctcctcc 33379432 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 27636876 gtgcaggcgcaggcgctggc 27636895
>ref|XM_510606.1| PREDICTED: Pan troglodytes similar to H2A histone family, member V isoform 1; purine-rich binding element protein B; histone H2A.F/Z variant (LOC453664), mRNA Length = 714 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctccc 163 |||||||||||||||||||||| |||||| Sbjct: 75 gccgccgccgccgctctccttcacctccc 47
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 250 gcgggtgcaggtgcaggcgcaggcg 274 ||||||||||||||||||||||||| Sbjct: 209457 gcgggtgcaggtgcaggcgcaggcg 209433
>ref|XM_568337.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM00690) partial mRNA Length = 3231 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 250 gcgggtgcaggtgcaggcgcaggcg 274 ||||||||||||||||||||||||| Sbjct: 2983 gcgggtgcaggtgcaggcgcaggcg 3007
>ref|XM_568339.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNM00680) partial mRNA Length = 1515 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 250 gcgggtgcaggtgcaggcgcaggcg 274 ||||||||||||||||||||||||| Sbjct: 1328 gcgggtgcaggtgcaggcgcaggcg 1304
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||||||||| ||||||| Sbjct: 33978 gccgccgccgccgctctcctcctcctcc 33951
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||||||||| ||||||| Sbjct: 32515244 gccgccgccgccgctctcctcctcctcc 32515217 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 ||||||||| || ||||||||||||||| Sbjct: 19619454 gccgccgccacccctctccttctcctcc 19619427 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 catgaagccgccgccgccgc 148 |||||||||||||||||||| Sbjct: 13275282 catgaagccgccgccgccgc 13275301
>dbj|AK070786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M09, full insert sequence Length = 1258 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||||||||| ||||||| Sbjct: 327 gccgccgccgccgctctcctcctcctcc 300
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcaggcgct 276 |||||||||||||||||||||||| Sbjct: 1219486 ggtgcaggtgcaggcgcaggcgct 1219463
>ref|XM_710271.1| Candida albicans SC5314 hypothetical protein (CaO19.5823), mRNA Length = 1035 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 gcgggtgcaggtgcaggcgcagg 272 ||||||||||||||||||||||| Sbjct: 736 gcgggtgcaggtgcaggcgcagg 758
>ref|XM_710206.1| Candida albicans SC5314 hypothetical protein (CaO19.13245), mRNA Length = 1035 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 gcgggtgcaggtgcaggcgcagg 272 ||||||||||||||||||||||| Sbjct: 736 gcgggtgcaggtgcaggcgcagg 758
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 caggtgcaggcgcaggcgctggc 279 ||||||||||||||||||||||| Sbjct: 6067 caggtgcaggcgcaggcgctggc 6089
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 caggtgcaggcgcaggcgctggc 279 ||||||||||||||||||||||| Sbjct: 90694 caggtgcaggcgcaggcgctggc 90716
>gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, complete sequence Length = 186540 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctc 161 |||||||||||||||||||||| |||| Sbjct: 162627 gccgccgccgccgctctccttcacctc 162653
>gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, complete sequence Length = 186674 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctc 161 |||||||||||||||||||||| |||| Sbjct: 23902 gccgccgccgccgctctccttcacctc 23876
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 410 gcttgccgtacttggcggcggag 432 ||||||||||||||||||||||| Sbjct: 1404854 gcttgccgtacttggcggcggag 1404876
>ref|XM_466277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 480 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 48 cgccgccgccgctctcctcctcctcc 23
>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16, complete sequence Length = 164501 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 4156 gccgccgccgccactctcctcctcctcccc 4185
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 59087 gccgccgccgccactctcctcctcctcccc 59058
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 12334744 gccgccgccgccactctcctcctcctcccc 12334773 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 gccgctctccttctcctccccgtcaccc 171 ||||||| ||||||||||||| |||||| Sbjct: 22367197 gccgctccccttctcctccccctcaccc 22367170 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 14771713 aagccgccgccgccgctctc 14771732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 21437486 cgccgccgccgctctcctcctcctcc 21437461 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 27174024 gccgccgccgccgctctcct 27174005 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgc 275 |||||||||||||||||||| Sbjct: 96508 gcaggtgcaggcgcaggcgc 96527
>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence Length = 180424 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acagtaataaaatacaaaaaag 40 |||||||||||||||||||||| Sbjct: 174943 acagtaataaaatacaaaaaag 174922
>dbj|AK223599.1| Homo sapiens mRNA for factor for adipocyte differentiation 104 variant, clone: FCC131E05 Length = 3981 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 134 agccgccgccgccgctctccttctcc 159 ||||||||||||||||||||| |||| Sbjct: 46 agccgccgccgccgctctcctcctcc 21 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||||||||||| |||| Sbjct: 70 ccgccgccgccgctctcctcctcc 47
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 32413 cgccgccgccgctctcctcctcctcc 32388
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 93393 gccgccgccgccactctcctcctcctcccc 93422
>gb|AY298951.1| Chlamydomonas reinhardtii long flagella (LF1) gene, complete cds Length = 7227 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 ggtgcaggtgcaggcgcaggcgctgg 278 ||||||||||||||| |||||||||| Sbjct: 2838 ggtgcaggtgcaggcacaggcgctgg 2863
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 97439 cgccgccgccgctctcctcctcctcc 97414
>dbj|AK119574.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B03, full insert sequence Length = 2075 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 197 gccgccgccgccactctcctcctcctcccc 168
>dbj|AK072445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110M11, full insert sequence Length = 2372 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 64 cgccgccgccgctctcctcctcctcc 39
>dbj|AK069706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028A22, full insert sequence Length = 2255 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcccc 164 |||||||||||| ||||||| ||||||||| Sbjct: 198 gccgccgccgccactctcctcctcctcccc 169
>dbj|AK059007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H07, full insert sequence Length = 480 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 137 cgccgccgccgctctccttctcctcc 162 |||||||||||||||||| ||||||| Sbjct: 48 cgccgccgccgctctcctcctcctcc 23
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gcaggtgcaggcgcaggcgctggct 280 |||||||||||||| |||||||||| Sbjct: 454893 gcaggtgcaggcgctggcgctggct 454869
>emb|AJ237609.1|BRE237609 Borrelia recurrentis vmpA1 gene, silent copy Length = 2152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 taataaaatacaaaaaaggaa 43 ||||||||||||||||||||| Sbjct: 1510 taataaaatacaaaaaaggaa 1490
>emb|AJ237608.1|BRE237608 Borrelia recurrentis vmpA1 gene, expressed copy Length = 1700 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 taataaaatacaaaaaaggaa 43 ||||||||||||||||||||| Sbjct: 1346 taataaaatacaaaaaaggaa 1326
>emb|CR376848.7| Zebrafish DNA sequence from clone CH211-197K23 in linkage group 24, complete sequence Length = 218909 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tattttatacagtaataaaat 31 ||||||||||||||||||||| Sbjct: 66366 tattttatacagtaataaaat 66386
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 143 cgccgctctccttctcctccccgtcaccc 171 |||||||| ||||||||||||| |||||| Sbjct: 11988050 cgccgctccccttctcctccccctcaccc 11988022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 143 cgccgctctccttctcctccccgtcaccc 171 |||||||| ||||||||||||| |||||| Sbjct: 17415510 cgccgctccccttctcctccccctcaccc 17415538 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||| |||||||||||| Sbjct: 29443504 ccgccgccgcccctctccttctcc 29443527
>gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chromosome unknown, complete sequence Length = 234137 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 attttatacagtaataaaata 32 ||||||||||||||||||||| Sbjct: 126823 attttatacagtaataaaata 126843
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctccccgtc 167 |||||||||||||||| |||| |||||||||| Sbjct: 90601 gccgccgccgccgctccgcttcgcctccccgtc 90569
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ccgccgctctccttctcctcc 162 ||||||||||||||||||||| Sbjct: 1271618 ccgccgctctccttctcctcc 1271638
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 143 cgccgctctccttctcctccccgtcaccc 171 |||||||| ||||||||||||| |||||| Sbjct: 68902 cgccgctccccttctcctccccctcaccc 68930
>dbj|AK120587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145A09, full insert sequence Length = 1618 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctccccgtc 167 |||||||||||||||| |||| |||||||||| Sbjct: 376 gccgccgccgccgctccgcttcgcctccccgtc 344
>dbj|AK111785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089N11, full insert sequence Length = 3650 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcc 159 ||||||||||||||| ||||||||| Sbjct: 169 gccgccgccgccgctgtccttctcc 145
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acagtaataaaatacaaaaaa 39 ||||||||||||||||||||| Sbjct: 95853 acagtaataaaatacaaaaaa 95833
>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence Length = 235239 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tttatacagtaataaaataca 34 ||||||||||||||||||||| Sbjct: 86722 tttatacagtaataaaataca 86702
>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence Length = 197082 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 attttatacagtaataaaata 32 ||||||||||||||||||||| Sbjct: 94600 attttatacagtaataaaata 94580
>emb|CT025793.2| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 1134 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcaggcgctggctc 281 |||||||||||||| ||||||| |||||| Sbjct: 83 ggtgcaggtgcaggtgcaggcgttggctc 55
>gb|AF156744.1| Frankia sp. FE39 glutamine synthetase (glnA) gene, partial cds Length = 472 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caggtactcctcggccttct 379 |||||||||||||||||||| Sbjct: 63 caggtactcctcggccttct 44
>gb|AF156746.1| Frankia sp. FE46 glutamine synthetase (glnA) gene, partial cds Length = 473 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caggtactcctcggccttct 379 |||||||||||||||||||| Sbjct: 63 caggtactcctcggccttct 44
>gb|AF156745.1| Frankia sp. FE245 glutamine synthetase (glnA) gene, partial cds Length = 477 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caggtactcctcggccttct 379 |||||||||||||||||||| Sbjct: 63 caggtactcctcggccttct 44
>ref|XM_471683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3195 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 catgaagccgccgccgccgc 148 |||||||||||||||||||| Sbjct: 786 catgaagccgccgccgccgc 767
>ref|XM_470005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2070 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 38 gccgccgccgccgc-ctccttctcctcc 64
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cggcggaggcggcggctacc 462 |||||||||||||||||||| Sbjct: 2035566 cggcggaggcggcggctacc 2035547
>ref|NM_191685.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||| |||||||||||| Sbjct: 83 ccgccgccgcccctctccttctcc 60
>gb|BT017107.1| Zea mays clone EL01N0362F12.c mRNA sequence Length = 1383 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 tcttcatgaagccgccgccgccgc 148 ||||| |||||||||||||||||| Sbjct: 947 tcttcctgaagccgccgccgccgc 924
>ref|XM_469361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 774 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 535 gtgcaggcgcaggcgctggc 554
>ref|XM_472337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 ||||||||| || ||||||||||||||| Sbjct: 393 gccgccgccacccctctccttctcctcc 366
>gb|BT017885.1| Zea mays clone EL01N0514G02.c mRNA sequence Length = 870 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||| ||||||| ||||||||||||| Sbjct: 192 gccgccaccgccgccctccttctcctcc 165
>ref|NM_200825.1| Danio rerio zgc:73075 (zgc:73075), mRNA Length = 3056 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcttccctgacagcgatgc 191 |||||||||||||||||||| Sbjct: 189 ttcttccctgacagcgatgc 208
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 59168 aagccgccgccgccgctctc 59149
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 ccgccgccgccgctctccttctcctccc 163 ||||||||||||| ||||| |||||||| Sbjct: 74611 ccgccgccgccgccctcctcctcctccc 74638
>ref|XM_416688.1| PREDICTED: Gallus gallus similar to secretory protein containing thrombospondin motifs (LOC418480), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 138 gccgccgccgctctccttctcctccccg 165 ||||||||||| ||||| |||||||||| Sbjct: 237 gccgccgccgccctcctcctcctccccg 264
>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence Length = 185801 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 79830 gccgccgccgccgctctcct 79849
>gb|BC060902.1| Danio rerio zgc:73075, mRNA (cDNA clone MGC:73075 IMAGE:4146120), complete cds Length = 3056 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcttccctgacagcgatgc 191 |||||||||||||||||||| Sbjct: 189 ttcttccctgacagcgatgc 208
>ref|XM_583697.2| PREDICTED: Bos taurus similar to grancalcin (LOC507139), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcagg 272 |||||||||||||||||||| Sbjct: 490 ggtgcaggtgcaggcgcagg 471
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 442238 tcatgaagccgccgccgccg 442257
>ref|XM_001004847.1| PREDICTED: Mus musculus hypothetical protein LOC673170 (LOC673170), mRNA Length = 366 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcaggtgcaggcgcaggcgctggc 279 ||||| |||||||||||||||||| Sbjct: 76 gcaggcgcaggcgcaggcgctggc 53
>gb|AY295124.1| Anotrichium yagii photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY295123.1| Anotrichium yagii photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY295122.1| Anotrichium tenue photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY295121.1| Anotrichium tenue photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY295120.1| Anotrichium elongatum photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY295119.1| Anotrichium crinitum photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid gene for plastid product Length = 1951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 ccattcaagcttaggtgctg 591 |||||||||||||||||||| Sbjct: 391 ccattcaagcttaggtgctg 372
>gb|AY530730.1| Zea mays cultivar inbred line B73 Tha8 (tha8) mRNA, complete cds Length = 976 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 ccgccgccgctctccttctcctcc 162 |||||||||||| ||||||||||| Sbjct: 566 ccgccgccgctcgccttctcctcc 543
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 45412 gccgccgccgccgc-ctccttctcctcc 45438
>gb|AC113542.13| Mus musculus chromosome 5, clone RP23-195A18, complete sequence Length = 215127 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 74139 gccgccgccgccgc-ctccttctcctcc 74113
>gb|AC120922.4| Rattus norvegicus 9 BAC CH230-104J1 (Children's Hospital Oakland Research Institute) complete sequence Length = 256354 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgc 275 |||||||||||||||||||| Sbjct: 91570 gcaggtgcaggcgcaggcgc 91589
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 17221 gtgcaggcgcaggcgctggc 17202
>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence Length = 200353 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ttctcctccccgtcacccttcttccctg 181 ||||||||||| || ||||||||||||| Sbjct: 90541 ttctcctccccttcccccttcttccctg 90514
>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237247 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gcaggtgcaggcgcaggcgc 275 |||||||||||||||||||| Sbjct: 22196 gcaggtgcaggcgcaggcgc 22177
>gb|AY310914.1| Bothrops jararacussu bradykinin-potentiating/C-type natriuretic peptide precursor isoform 1 mRNA, partial cds Length = 1482 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 553 gccgccgccgccgctctcct 534
>gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosome 17, complete sequence Length = 213656 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 154 ttctcctccccgtcacccttcttccctg 181 ||||||||||| || ||||||||||||| Sbjct: 30388 ttctcctccccttcccccttcttccctg 30361
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 179259 gtgcaggcgcaggcgctggc 179240
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 131930 gtgcaggcgcaggcgctggc 131911
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 77936 gtgcaggcgcaggcgctggc 77955
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 1761558 tcatgaagccgccgccgccg 1761577
>gb|AC144716.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0108D09, complete sequence Length = 127371 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 45839 aagccgccgccgccgctctc 45858
>emb|AL670003.1|NCB9G16 Neurospora crassa DNA linkage group II BAC clone B9G16 Length = 69187 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 ||||||||||||||| |||||||||||| Sbjct: 17623 gccgccgccgccgct-tccttctcctcc 17597
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 1599848 tcatgaagccgccgccgccg 1599829
>emb|AL355932.1|NCB5O22 Neurospora crassa DNA linkage group II BAC clone B5O22 Length = 58349 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 ||||||||||||||| |||||||||||| Sbjct: 6225 gccgccgccgccgct-tccttctcctcc 6251
>emb|AL645726.22| Mouse DNA sequence from clone RP23-45M23 on chromosome 1, complete sequence Length = 231347 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 acttcatgaacccctgagccatct 127 ||||||| |||||||||||||||| Sbjct: 163912 acttcattaacccctgagccatct 163889
>emb|BX649406.10| Zebrafish DNA sequence from clone CH211-203N20 in linkage group 4 Contains two CpG islands, complete sequence Length = 141237 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ttattattttatacagtaat 26 |||||||||||||||||||| Sbjct: 31504 ttattattttatacagtaat 31485
>emb|CR859415.1| Pongo pygmaeus mRNA; cDNA DKFZp469D136 (from clone DKFZp469D136) Length = 5143 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||||||||||| |||| Sbjct: 86 ccgccgccgccgctctcctcctcc 63
>ref|NM_205136.1| Gallus gallus catenin (cadherin-associated protein), alpha 2 (CTNNA2), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 85 gccgccgccgccgc-ctccttctcctcc 59
>emb|AL954137.18| Zebrafish DNA sequence from clone CH211-222L21 in linkage group 11, complete sequence Length = 222163 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gtaataaaatacaaaaaagg 41 |||||||||||||||||||| Sbjct: 92821 gtaataaaatacaaaaaagg 92840
>gb|AC107326.4| Drosophila melanogaster X BAC RP98-33A8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177096 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccgctctccttctcctcccc 164 |||||||||||||||||||| Sbjct: 55326 ccgctctccttctcctcccc 55345
>gb|AE012137.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 45 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 8561 gtgcaggcgcaggcgctggc 8542
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 3724384 tcatgaagccgccgccgccg 3724365 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 catgaagccgccgccgccgc 148 |||||||||||||||||||| Sbjct: 2039639 catgaagccgccgccgccgc 2039620
>gb|AC018390.5| Homo sapiens chromosome , clone RP11-11E23, complete sequence Length = 167130 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aataaaatacaaaaaaggaa 43 |||||||||||||||||||| Sbjct: 100121 aataaaatacaaaaaaggaa 100140
>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence Length = 177483 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 ttatacagtaataaaatacaaaaa 38 |||||||||||||| ||||||||| Sbjct: 93828 ttatacagtaataatatacaaaaa 93851
>gb|AC095063.2| Homo sapiens BAC clone RP11-533K12 from 4, complete sequence Length = 153814 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tattttatacagtaataaaa 30 |||||||||||||||||||| Sbjct: 79112 tattttatacagtaataaaa 79131
>gb|M97656.1|RATSR Rattus norvegicus somatostatin receptor mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tgacagcgatgcagccccct 199 |||||||||||||||||||| Sbjct: 1395 tgacagcgatgcagccccct 1414
>gb|AC104185.2| Homo sapiens chromosome 3 clone RP11-268J19, complete sequence Length = 165918 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aataaaatacaaaaaaggaa 43 |||||||||||||||||||| Sbjct: 53590 aataaaatacaaaaaaggaa 53571
>gb|AC016194.7| Homo sapiens chromosome 8, clone RP11-24F20, complete sequence Length = 146768 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aataaaatacaaaaaaggaa 43 |||||||||||||||||||| Sbjct: 142286 aataaaatacaaaaaaggaa 142267
>ref|XM_695897.1| PREDICTED: Danio rerio similar to Photoreceptor protein s26 (LOC572207), mRNA Length = 896 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcttccctgacagcgatgc 191 |||||||||||||||||||| Sbjct: 232 ttcttccctgacagcgatgc 251
>dbj|AK144573.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730002D07 product:slit homolog 2 (Drosophila), full insert sequence Length = 6564 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 119 gccgccgccgccgc-ctccttctcctcc 93
>gb|S63255.1| gamma-glutamyltranspeptidase [Pseudomonas, A14, Genomic, 2220 nt] Length = 2220 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 616 tcatgaagccgccgccgccg 597
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 462821 tcatgaagccgccgccgccg 462802
>emb|BX465196.11| Mouse DNA sequence from clone RP23-459K15 on chromosome X, complete sequence Length = 184607 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgctggc 279 ||||| |||||||||||||||||| Sbjct: 87187 gcaggcgcaggcgcaggcgctggc 87210
>dbj|AK084293.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230018J08 product:unclassifiable, full insert sequence Length = 2493 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 97 gccgccgccgccgc-ctccttctcctcc 71
>dbj|AK084012.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130076F04 product:slit homolog 2 (Drosophila), full insert sequence Length = 3209 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 115 gccgccgccgccgc-ctccttctcctcc 89
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 492668 gtgcaggcgcaggcgctggc 492649
>dbj|AK090248.1| Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630026F06 product:unclassifiable, full insert sequence Length = 1492 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 42 gccgccgccgccgctctcct 23
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 1023592 tcatgaagccgccgccgccg 1023573
>dbj|AK053913.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130320P19 product:slit homolog 2 (Drosophila), full insert sequence Length = 3264 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 119 gccgccgccgccgc-ctccttctcctcc 93
>gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224257 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tgaacccctgagccatcttc 129 |||||||||||||||||||| Sbjct: 180448 tgaacccctgagccatcttc 180429
>dbj|AK053182.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030026O16 product:slit homolog 2 (Drosophila), full insert sequence Length = 3350 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 119 gccgccgccgccgc-ctccttctcctcc 93
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 23633646 aagccgccgccgccgctctc 23633627 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 7600082 aagccgccgccgccgctctc 7600063
>gb|AF330231.1|AF330231 Chlamydomonas reinhardtii putative serine/threonine kinase (ACV4) gene, partial cds; and RNA stability factor MCA1 (MCA1) gene, complete cds Length = 12073 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctc 158 ||||||||| |||||||||||||| Sbjct: 11689 gccgccgcccccgctctccttctc 11666
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 gtcctggcggcctccgcgaccagc 528 |||||||||||||||||| ||||| Sbjct: 6172247 gtcctggcggcctccgcggccagc 6172224
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gtgcaggcgcaggcgctggc 279 |||||||||||||||||||| Sbjct: 4961 gtgcaggcgcaggcgctggc 4942
>gb|AE004563.1| Pseudomonas aeruginosa PAO1, section 124 of 529 of the complete genome Length = 9937 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 6111 tcatgaagccgccgccgccg 6130
>ref|XM_574171.1| PREDICTED: Rattus norvegicus methyl-CpG binding domain protein 1 (predicted) (Mbd1_predicted), mRNA Length = 2777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcagg 272 |||||||||||||||||||| Sbjct: 709 ggtgcaggtgcaggcgcagg 690
>gb|AC069259.14| Homo sapiens 3 BAC RP11-163H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166530 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||||||||||| |||| Sbjct: 107877 ccgccgccgccgctctcctcctcc 107900
>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456F08 Length = 156850 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||| |||||||||||| Sbjct: 9778 ccgccgccgcccctctccttctcc 9801
>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0030G18 Length = 167557 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 63800 aagccgccgccgccgctctc 63819
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 70473 gccgccgccgccgctctcct 70454
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 24695 gccgccgccgccgctctcct 24676
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 628862 tcatgaagccgccgccgccg 628843
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 4599299 tcatgaagccgccgccgccg 4599280
>gb|BC080810.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone IMAGE:6465524), containing frame-shift errors Length = 4777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 22 gccgccgccgccgctctcct 3
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 gccgctctccttctcctccccgtcaccc 171 ||||||| ||||||||||||| |||||| Sbjct: 64180 gccgctccccttctcctccccctcaccc 64153
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgc 275 |||||||||||||||||||| Sbjct: 91117 gcaggtgcaggcgcaggcgc 91136
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgc 275 |||||||||||||||||||| Sbjct: 45535 gcaggtgcaggcgcaggcgc 45554
>gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150676 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ttattattttatacagtaat 26 |||||||||||||||||||| Sbjct: 75852 ttattattttatacagtaat 75871
>dbj|AK110327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-D08, full insert sequence Length = 2577 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cggcgggtgcaggtgcaggcgcaggcgc 275 |||||||||| ||||| ||||||||||| Sbjct: 1661 cggcgggtgcgggtgcgggcgcaggcgc 1688
>dbj|AK102451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O20, full insert sequence Length = 1586 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||| |||||||||||| Sbjct: 209 ccgccgccgcccctctccttctcc 186
>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full insert sequence Length = 2070 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 38 gccgccgccgccgc-ctccttctcctcc 64
>gb|BT024052.1| Zea mays clone EL01N0437G11 mRNA sequence Length = 1768 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||| ||||||| ||||||||||||| Sbjct: 1085 gccgccaccgccgccctccttctcctcc 1058
>gb|BT024032.1| Zea mays clone EL01N0422H11 mRNA sequence Length = 1804 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||| ||||||| ||||||||||||| Sbjct: 1124 gccgccaccgccgccctccttctcctcc 1097
>emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 in linkage group 19, complete sequence Length = 149624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ttcttccctgacagcgatgc 191 |||||||||||||||||||| Sbjct: 123718 ttcttccctgacagcgatgc 123737
>gb|AY108072.1| Zea mays PCO123189 mRNA sequence Length = 398 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||| ||||||| ||||||||||||| Sbjct: 108 gccgccaccgccgccctccttctcctcc 81
>emb|Z46996.1|CEC34C12 Caenorhabditis elegans Cosmid C34C12, complete sequence Length = 34759 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gcaggcgcaggcgctggctc 281 |||||||||||||||||||| Sbjct: 20220 gcaggcgcaggcgctggctc 20239
>gb|AY104878.1| Zea mays PCO082540 mRNA sequence Length = 825 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||| ||||||| Sbjct: 90 gccgccgccgccgcgctcctcctcctcc 117
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccgctctccttctcctcccc 164 |||||||||||||||||||| Sbjct: 117636 ccgctctccttctcctcccc 117655
>gb|BC081932.1| Rattus norvegicus methyl-CpG binding domain protein 1, mRNA (cDNA clone MGC:93958 IMAGE:7114194), complete cds Length = 2491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcagg 272 |||||||||||||||||||| Sbjct: 591 ggtgcaggtgcaggcgcagg 572
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 1320515 tcatgaagccgccgccgccg 1320496
>dbj|D11090.1|CHKANC Gallus gallus mRNA for alpha N-catenin, complete cds Length = 3123 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 |||||||||||||| ||||||||||||| Sbjct: 85 gccgccgccgccgc-ctccttctcctcc 59
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tcatgaagccgccgccgccg 147 |||||||||||||||||||| Sbjct: 1492548 tcatgaagccgccgccgccg 1492529
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 23943582 aagccgccgccgccgctctc 23943563 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 ccgccgccgccgctctccttctcctccc 163 ||||||||||||| ||||| |||||||| Sbjct: 18969417 ccgccgccgccgccctcctcctcctccc 18969444 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagccgccgccgccgctctc 152 |||||||||||||||||||| Sbjct: 7670169 aagccgccgccgccgctctc 7670150
>emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035B13, complete sequence Length = 145234 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 catgaagccgccgccgccgc 148 |||||||||||||||||||| Sbjct: 47381 catgaagccgccgccgccgc 47400
>ref|NM_001011924.1| Rattus norvegicus methyl-CpG binding domain protein 1 (Mbd1), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggtgcaggtgcaggcgcagg 272 |||||||||||||||||||| Sbjct: 591 ggtgcaggtgcaggcgcagg 572
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctccttctcctcc 162 ||||||||| || ||||||||||||||| Sbjct: 70180 gccgccgccacccctctccttctcctcc 70153
>emb|AL928830.10| Zebrafish DNA sequence from clone CH211-119E16, complete sequence Length = 182614 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 7 ttattattttatacagtaataaaataca 34 |||| ||||||||||||||||| ||||| Sbjct: 123269 ttataattttatacagtaataatataca 123242
>emb|BX001057.4| Zebrafish DNA sequence from clone CH211-89G13 in linkage group 1, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 588 gctggtagcaacaatcttttgtcg 611 ||||||||||| |||||||||||| Sbjct: 95363 gctggtagcaagaatcttttgtcg 95340
>gb|BC059816.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone IMAGE:6413001), containing frame-shift errors Length = 6047 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gccgccgccgccgctctcct 154 |||||||||||||||||||| Sbjct: 141 gccgccgccgccgctctcct 122
>emb|BX001062.7| Mouse DNA sequence from clone RP23-275J15 on chromosome X, complete sequence Length = 154573 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgctggc 279 ||||| |||||||||||||||||| Sbjct: 61442 gcaggcgcaggcgcaggcgctggc 61465
>gb|BC012204.1| Homo sapiens fibronectin type III domain containing 3B, mRNA (cDNA clone IMAGE:3882800), complete cds Length = 949 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 ccgccgccgccgctctccttctcc 159 ||||||||||||||||||| |||| Sbjct: 39 ccgccgccgccgctctcctcctcc 16
>emb|AL691445.21| Mouse DNA sequence from clone RP23-67G3 on chromosome X, complete sequence Length = 189233 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcaggtgcaggcgcaggcgctggc 279 ||||| |||||||||||||||||| Sbjct: 44457 gcaggcgcaggcgcaggcgctggc 44434
>emb|AL807393.10| Mouse DNA sequence from clone RP23-142A9 on chromosome X, complete sequence Length = 147187 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 cagtaataaaatacaaaaaaggaa 43 ||||||||||||||| |||||||| Sbjct: 25397 cagtaataaaatacataaaaggaa 25374
>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete sequence Length = 227762 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 gcaggtgcaggcgcaggcgctggc 279 ||||| |||||||||||||||||| Sbjct: 220255 gcaggcgcaggcgcaggcgctggc 220278
>gb|AC161607.4| Mus musculus BAC clone RP23-152L11 from chromosome 16, complete sequence Length = 212274 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 gctggtagcaacaatctttt 607 |||||||||||||||||||| Sbjct: 131031 gctggtagcaacaatctttt 131050
>emb|AL021067.1|DMC123F11 Drosophila melanogaster cosmid clone 123F11 Length = 23109 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ccgctctccttctcctcccc 164 |||||||||||||||||||| Sbjct: 7655 ccgctctccttctcctcccc 7674 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,852,016 Number of Sequences: 3902068 Number of extensions: 7852016 Number of successful extensions: 323556 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 310743 Number of HSP's gapped (non-prelim): 13317 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
