ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19k02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GDIR_ARATH (Q9SFC6) Rho GDP-dissociation inhibitor 1 (Rho GDI-1)... 144 1e-34
2GDIR_CAEEL (Q20496) Probable rho GDP-dissociation inhibitor (Rho... 85 8e-17
3GDIR_HUMAN (P52565) Rho GDP-dissociation inhibitor 1 (Rho GDI 1)... 81 1e-15
4GDIS_MOUSE (Q61599) Rho GDP-dissociation inhibitor 2 (Rho GDI 2)... 78 9e-15
5GDIR_MOUSE (Q99PT1) Rho GDP-dissociation inhibitor 1 (Rho GDI 1)... 78 9e-15
6GDIR_BOVIN (P19803) Rho GDP-dissociation inhibitor 1 (Rho GDI 1)... 78 9e-15
7GDIS_BOVIN (Q9TU03) Rho GDP-dissociation inhibitor 2 (Rho GDI 2)... 77 2e-14
8GDIS_HUMAN (P52566) Rho GDP-dissociation inhibitor 2 (Rho GDI 2)... 77 3e-14
9GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3)... 69 7e-12
10GDIR_YEAST (Q12434) Rho GDP-dissociation inhibitor (Rho GDI) 64 2e-10
11GDIT_HUMAN (Q99819) Rho GDP-dissociation inhibitor 3 (Rho GDI 3)... 64 2e-10
12GDIR_CAVPO (P80237) Rho GDP-dissociation inhibitor 1 (Rho GDI 1)... 39 0.005
13CP4D8_DROME (Q9VS79) Cytochrome P450 4d8 (EC 1.14.-.-) (CYPIVD8) 30 3.8
14HAK4_ORYSA (Q6YSA9) Probable potassium transporter 4 (OsHAK4) 30 3.8
15LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3) ... 29 6.4
16OSTA_XANAC (Q8PP22) Organic solvent tolerance protein precursor 28 8.4
17ITA3_HUMAN (P26006) Integrin alpha-3 precursor (Galactoprotein B... 28 8.4

>GDIR_ARATH (Q9SFC6) Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1)|
          Length = 240

 Score =  144 bits (362), Expect = 1e-34
 Identities = 64/96 (66%), Positives = 82/96 (85%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y+ +F+F V+NNIVSGL+Y++TVWKTGV+V+  K MLGTFSPQ EPY +   E++TPSG+
Sbjct: 145 YNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGM 204

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDWPAL 165
           FARGSYSAR KF+DDD K YL++ YSF+IRK+WPAL
Sbjct: 205 FARGSYSARTKFLDDDNKCYLEINYSFDIRKEWPAL 240



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>GDIR_CAEEL (Q20496) Probable rho GDP-dissociation inhibitor (Rho GDI)|
          Length = 191

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 38/92 (41%), Positives = 55/92 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y   F+F V   I SGL Y H V ++G+ VEN+K M+G+++P+ E   YK+  +  PSG+
Sbjct: 100 YRLSFAFHVQREITSGLHYKHKVKRSGITVENEKYMMGSYAPKLEIQEYKSPNEEAPSGM 159

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKD 177
             RG Y    K  DDD  VYLD +++  I K+
Sbjct: 160 MHRGKYKVYSKITDDDNNVYLDWQWTLHITKE 191



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>GDIR_HUMAN (P52565) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI|
           alpha)
          Length = 204

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 34/93 (36%), Positives = 55/93 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + SF V+  IVSG+KY    ++ GV+++    M+G++ P+ E Y +    +  P G+
Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGM 169

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARGSYS + +F DDD   +L   ++  I+KDW
Sbjct: 170 LARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202



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>GDIS_MOUSE (Q61599) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI|
           beta) (D4)
          Length = 200

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 34/93 (36%), Positives = 56/93 (60%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + +F V+ +IVSGLKY    ++TG+RV+    M+G++ P+ E Y +    +  P G+
Sbjct: 106 YRVKINFKVNKDIVSGLKYVQHTYRTGMRVDKATFMVGSYGPRPEEYEFLTPVEEAPKGM 165

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARG+Y  +  F DDD + +L   ++  I+KDW
Sbjct: 166 LARGTYHNKSFFTDDDKQDHLTWEWNLAIKKDW 198



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>GDIR_MOUSE (Q99PT1) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI|
           alpha) (GDI-1)
          Length = 204

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 32/93 (34%), Positives = 55/93 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + SF V+  IVSG+KY    ++ GV+++    M+G++ P+ E Y +    +  P G+
Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGM 169

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARGSY+ + +F DDD   +L   ++  I+K+W
Sbjct: 170 LARGSYNIKSRFTDDDKTDHLSWEWNLTIKKEW 202



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>GDIR_BOVIN (P19803) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI|
           alpha)
          Length = 204

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 32/93 (34%), Positives = 55/93 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + SF V+  IVSG+KY    ++ GV+++    M+G++ P+ E Y +    +  P G+
Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGM 169

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARGSY+ + +F DDD   +L   ++  I+K+W
Sbjct: 170 LARGSYNIKSRFTDDDRTDHLSWEWNLTIKKEW 202



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>GDIS_BOVIN (Q9TU03) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI|
           beta) (Ly-GDI) (D4-GDP-dissociation inhibitor) (D4-GDI)
          Length = 200

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 34/93 (36%), Positives = 55/93 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + +F V+ +IVSGLKY    ++TGV+V+    M+G++ P+ E Y +    +  P G+
Sbjct: 106 YRVKINFKVNKDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPIEEAPKGM 165

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARG+Y  +  F DDD   +L   ++  I+KDW
Sbjct: 166 LARGTYHNKSFFTDDDKHDHLTWEWNLSIKKDW 198



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>GDIS_HUMAN (P52566) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI|
           beta) (Ly-GDI)
          Length = 201

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 33/93 (35%), Positives = 55/93 (59%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  +  F V+ +IVSGLKY    ++TGV+V+    M+G++ P+ E Y +    +  P G+
Sbjct: 107 YRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGM 166

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARG+Y  +  F DDD + +L   ++  I+K+W
Sbjct: 167 LARGTYHNKSFFTDDDKQDHLSWEWNLSIKKEW 199



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>GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI|
           gamma) (Rho-GDI2)
          Length = 225

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + +F V+  IVSGLK  H  ++ G+RV+    M+G++ P+ + Y +    +  P G 
Sbjct: 131 YKVKITFKVNKEIVSGLKCLHHTYRRGLRVDKAIFMVGSYGPRAQEYEFVTSVEEAPRGA 190

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
            ARG Y  R  F DDD   +L   +   + +DW
Sbjct: 191 LARGLYVVRSLFTDDDRLNHLSWEWHLHVCQDW 223



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>GDIR_YEAST (Q12434) Rho GDP-dissociation inhibitor (Rho GDI)|
          Length = 202

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEP---YTYKAEEDSTP 282
           Y  +  F V + I++GL+Y   + K G+ V+     LG+++P  +    Y  +  E   P
Sbjct: 108 YKLKIVFKVQHEIITGLRYVQYIKKAGIAVDKIDDHLGSYAPNTKTKPFYEVELPESEAP 167

Query: 281 SGIFARGSYSARLKFVDDDGKVYLDMRYSFEIRK 180
           SG  ARG+YSA  KF+DDD   +L + +  EI K
Sbjct: 168 SGFLARGNYSAVSKFIDDDKTNHLTLNWGVEIVK 201



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>GDIT_HUMAN (Q99819) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI|
           gamma)
          Length = 225

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 31/93 (33%), Positives = 45/93 (48%)
 Frame = -2

Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273
           Y  + SF V   IVSGLK  H  ++ G+RV+    M+G++ P  + Y +    +  P G 
Sbjct: 131 YRVKISFKVHREIVSGLKCLHHTYRRGLRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGA 190

Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174
             RG Y     F DDD   +L   +   I +DW
Sbjct: 191 LVRGPYLVVSLFTDDDRTHHLSWEWGLCICQDW 223



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>GDIR_CAVPO (P80237) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI|
           alpha) (Fragments)
          Length = 111

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = -2

Query: 425 SNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSAR 246
           S  I    +Y    ++ GV+++    M+G++ P+ E Y +    +  P G+ AR      
Sbjct: 38  SFKIKISFRYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLAR------ 91

Query: 245 LKFVDDDGKVYLDMRYSFEIRK 180
             F DDD   +L    +  I+K
Sbjct: 92  --FTDDDKTDHLSGERNLTIKK 111



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>CP4D8_DROME (Q9VS79) Cytochrome P450 4d8 (EC 1.14.-.-) (CYPIVD8)|
          Length = 463

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -2

Query: 428 VSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTP 282
           V   + +  KY+H+V   GV     ++++G F   ++P T+   ++  P
Sbjct: 337 VGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIP 385



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>HAK4_ORYSA (Q6YSA9) Probable potassium transporter 4 (OsHAK4)|
          Length = 697

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 384 LEDRSKSGEPEGDAGDIQPSAGALHVQGRRR*H 286
           L +R   GE EG+  +   +AG +HV+G+ R H
Sbjct: 619 LRERVVDGEEEGERVEAARAAGVVHVRGKMRFH 651



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>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)|
           (Triacylglycerol lipase)
          Length = 684

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +3

Query: 264 PRKDAARGAIFFGLVRVGLLLRAECPQHH 350
           P  DA RGAI     R    LR  CPQHH
Sbjct: 425 PAADAGRGAI-----RADACLRQGCPQHH 448



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>OSTA_XANAC (Q8PP22) Organic solvent tolerance protein precursor|
          Length = 813

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -2

Query: 407 GLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDST---PSGIFARGSYSARLKF 237
           G+  +   W  G+  +  ++   T   Q  PY  +     T   P GIF  G Y+  ++F
Sbjct: 349 GIYGTGETWTAGLMADRWQLTDYTLDEQALPYNRQPRAYFTWEKPFGIFEAGVYAEAVRF 408

Query: 236 VDDD 225
             DD
Sbjct: 409 THDD 412



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>ITA3_HUMAN (P26006) Integrin alpha-3 precursor (Galactoprotein B3) (GAPB3)|
           (VLA-3 alpha chain) (FRP-2) (CD49c antigen) [Contains:
           Integrin alpha-3 heavy chain; Integrin alpha-3 light
           chain]
          Length = 1066

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 255 IGAP----RKDAARGAIFFGLVRVGLLLRAECPQHHLLVLHSYSGLPDGVRVLETGHDVV 422
           +GAP    RK+   GAI+  + + G       P H  L+LH  SG   G+ V   G D+ 
Sbjct: 326 VGAPYYFERKEEVGGAIYVFMNQAG----TSFPAHPSLLLHGPSGSAFGLSVASIG-DIN 380

Query: 423 GDG 431
            DG
Sbjct: 381 QDG 383


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,320,776
Number of Sequences: 219361
Number of extensions: 1162649
Number of successful extensions: 2894
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2894
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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