Clone Name | rbasd19k02 |
---|---|
Clone Library Name | barley_pub |
>GDIR_ARATH (Q9SFC6) Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1)| Length = 240 Score = 144 bits (362), Expect = 1e-34 Identities = 64/96 (66%), Positives = 82/96 (85%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y+ +F+F V+NNIVSGL+Y++TVWKTGV+V+ K MLGTFSPQ EPY + E++TPSG+ Sbjct: 145 YNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGM 204 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDWPAL 165 FARGSYSAR KF+DDD K YL++ YSF+IRK+WPAL Sbjct: 205 FARGSYSARTKFLDDDNKCYLEINYSFDIRKEWPAL 240
>GDIR_CAEEL (Q20496) Probable rho GDP-dissociation inhibitor (Rho GDI)| Length = 191 Score = 85.1 bits (209), Expect = 8e-17 Identities = 38/92 (41%), Positives = 55/92 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y F+F V I SGL Y H V ++G+ VEN+K M+G+++P+ E YK+ + PSG+ Sbjct: 100 YRLSFAFHVQREITSGLHYKHKVKRSGITVENEKYMMGSYAPKLEIQEYKSPNEEAPSGM 159 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKD 177 RG Y K DDD VYLD +++ I K+ Sbjct: 160 MHRGKYKVYSKITDDDNNVYLDWQWTLHITKE 191
>GDIR_HUMAN (P52565) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) Length = 204 Score = 80.9 bits (198), Expect = 1e-15 Identities = 34/93 (36%), Positives = 55/93 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + SF V+ IVSG+KY ++ GV+++ M+G++ P+ E Y + + P G+ Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGM 169 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARGSYS + +F DDD +L ++ I+KDW Sbjct: 170 LARGSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202
>GDIS_MOUSE (Q61599) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (D4) Length = 200 Score = 78.2 bits (191), Expect = 9e-15 Identities = 34/93 (36%), Positives = 56/93 (60%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + +F V+ +IVSGLKY ++TG+RV+ M+G++ P+ E Y + + P G+ Sbjct: 106 YRVKINFKVNKDIVSGLKYVQHTYRTGMRVDKATFMVGSYGPRPEEYEFLTPVEEAPKGM 165 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARG+Y + F DDD + +L ++ I+KDW Sbjct: 166 LARGTYHNKSFFTDDDKQDHLTWEWNLAIKKDW 198
>GDIR_MOUSE (Q99PT1) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) (GDI-1) Length = 204 Score = 78.2 bits (191), Expect = 9e-15 Identities = 32/93 (34%), Positives = 55/93 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + SF V+ IVSG+KY ++ GV+++ M+G++ P+ E Y + + P G+ Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGM 169 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARGSY+ + +F DDD +L ++ I+K+W Sbjct: 170 LARGSYNIKSRFTDDDKTDHLSWEWNLTIKKEW 202
>GDIR_BOVIN (P19803) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) Length = 204 Score = 78.2 bits (191), Expect = 9e-15 Identities = 32/93 (34%), Positives = 55/93 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + SF V+ IVSG+KY ++ GV+++ M+G++ P+ E Y + + P G+ Sbjct: 110 YRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGM 169 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARGSY+ + +F DDD +L ++ I+K+W Sbjct: 170 LARGSYNIKSRFTDDDRTDHLSWEWNLTIKKEW 202
>GDIS_BOVIN (Q9TU03) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (Ly-GDI) (D4-GDP-dissociation inhibitor) (D4-GDI) Length = 200 Score = 77.4 bits (189), Expect = 2e-14 Identities = 34/93 (36%), Positives = 55/93 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + +F V+ +IVSGLKY ++TGV+V+ M+G++ P+ E Y + + P G+ Sbjct: 106 YRVKINFKVNKDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPIEEAPKGM 165 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARG+Y + F DDD +L ++ I+KDW Sbjct: 166 LARGTYHNKSFFTDDDKHDHLTWEWNLSIKKDW 198
>GDIS_HUMAN (P52566) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (Ly-GDI) Length = 201 Score = 76.6 bits (187), Expect = 3e-14 Identities = 33/93 (35%), Positives = 55/93 (59%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + F V+ +IVSGLKY ++TGV+V+ M+G++ P+ E Y + + P G+ Sbjct: 107 YRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGM 166 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARG+Y + F DDD + +L ++ I+K+W Sbjct: 167 LARGTYHNKSFFTDDDKQDHLSWEWNLSIKKEW 199
>GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI| gamma) (Rho-GDI2) Length = 225 Score = 68.6 bits (166), Expect = 7e-12 Identities = 31/93 (33%), Positives = 49/93 (52%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + +F V+ IVSGLK H ++ G+RV+ M+G++ P+ + Y + + P G Sbjct: 131 YKVKITFKVNKEIVSGLKCLHHTYRRGLRVDKAIFMVGSYGPRAQEYEFVTSVEEAPRGA 190 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 ARG Y R F DDD +L + + +DW Sbjct: 191 LARGLYVVRSLFTDDDRLNHLSWEWHLHVCQDW 223
>GDIR_YEAST (Q12434) Rho GDP-dissociation inhibitor (Rho GDI)| Length = 202 Score = 63.9 bits (154), Expect = 2e-10 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEP---YTYKAEEDSTP 282 Y + F V + I++GL+Y + K G+ V+ LG+++P + Y + E P Sbjct: 108 YKLKIVFKVQHEIITGLRYVQYIKKAGIAVDKIDDHLGSYAPNTKTKPFYEVELPESEAP 167 Query: 281 SGIFARGSYSARLKFVDDDGKVYLDMRYSFEIRK 180 SG ARG+YSA KF+DDD +L + + EI K Sbjct: 168 SGFLARGNYSAVSKFIDDDKTNHLTLNWGVEIVK 201
>GDIT_HUMAN (Q99819) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI| gamma) Length = 225 Score = 63.5 bits (153), Expect = 2e-10 Identities = 31/93 (33%), Positives = 45/93 (48%) Frame = -2 Query: 452 YSFRFSFAVSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGI 273 Y + SF V IVSGLK H ++ G+RV+ M+G++ P + Y + + P G Sbjct: 131 YRVKISFKVHREIVSGLKCLHHTYRRGLRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGA 190 Query: 272 FARGSYSARLKFVDDDGKVYLDMRYSFEIRKDW 174 RG Y F DDD +L + I +DW Sbjct: 191 LVRGPYLVVSLFTDDDRTHHLSWEWGLCICQDW 223
>GDIR_CAVPO (P80237) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) (Fragments) Length = 111 Score = 39.3 bits (90), Expect = 0.005 Identities = 21/82 (25%), Positives = 37/82 (45%) Frame = -2 Query: 425 SNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSAR 246 S I +Y ++ GV+++ M+G++ P+ E Y + + P G+ AR Sbjct: 38 SFKIKISFRYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLAR------ 91 Query: 245 LKFVDDDGKVYLDMRYSFEIRK 180 F DDD +L + I+K Sbjct: 92 --FTDDDKTDHLSGERNLTIKK 111
>CP4D8_DROME (Q9VS79) Cytochrome P450 4d8 (EC 1.14.-.-) (CYPIVD8)| Length = 463 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/49 (24%), Positives = 25/49 (51%) Frame = -2 Query: 428 VSNNIVSGLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDSTP 282 V + + KY+H+V GV ++++G F ++P T+ ++ P Sbjct: 337 VGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIP 385
>HAK4_ORYSA (Q6YSA9) Probable potassium transporter 4 (OsHAK4)| Length = 697 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -1 Query: 384 LEDRSKSGEPEGDAGDIQPSAGALHVQGRRR*H 286 L +R GE EG+ + +AG +HV+G+ R H Sbjct: 619 LRERVVDGEEEGERVEAARAAGVVHVRGKMRFH 651
>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)| (Triacylglycerol lipase) Length = 684 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +3 Query: 264 PRKDAARGAIFFGLVRVGLLLRAECPQHH 350 P DA RGAI R LR CPQHH Sbjct: 425 PAADAGRGAI-----RADACLRQGCPQHH 448
>OSTA_XANAC (Q8PP22) Organic solvent tolerance protein precursor| Length = 813 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = -2 Query: 407 GLKYSHTVWKTGVRVENQKVMLGTFSPQQEPYTYKAEEDST---PSGIFARGSYSARLKF 237 G+ + W G+ + ++ T Q PY + T P GIF G Y+ ++F Sbjct: 349 GIYGTGETWTAGLMADRWQLTDYTLDEQALPYNRQPRAYFTWEKPFGIFEAGVYAEAVRF 408 Query: 236 VDDD 225 DD Sbjct: 409 THDD 412
>ITA3_HUMAN (P26006) Integrin alpha-3 precursor (Galactoprotein B3) (GAPB3)| (VLA-3 alpha chain) (FRP-2) (CD49c antigen) [Contains: Integrin alpha-3 heavy chain; Integrin alpha-3 light chain] Length = 1066 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +3 Query: 255 IGAP----RKDAARGAIFFGLVRVGLLLRAECPQHHLLVLHSYSGLPDGVRVLETGHDVV 422 +GAP RK+ GAI+ + + G P H L+LH SG G+ V G D+ Sbjct: 326 VGAPYYFERKEEVGGAIYVFMNQAG----TSFPAHPSLLLHGPSGSAFGLSVASIG-DIN 380 Query: 423 GDG 431 DG Sbjct: 381 QDG 383 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,320,776 Number of Sequences: 219361 Number of extensions: 1162649 Number of successful extensions: 2894 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2894 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)