ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19j23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507513.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1626_B09.4 mRNA Length = 1127 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 814 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 755 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 754 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 695 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 694 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 635 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 634 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 575 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 574 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 515 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 514 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 455 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 454 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 395 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 394 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 335 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 334 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 281
>ref|XM_466922.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 829 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 770 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 769 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 710 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 709 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 650 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 649 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 590 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 589 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 530 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 470 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 469 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 410 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 409 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 350 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 349 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 296
>ref|XM_507512.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1626_B09.4 mRNA Length = 995 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 829 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 770 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 769 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 710 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 709 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 650 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 649 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 590 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 589 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 530 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 470 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 469 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 410 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 409 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 350 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 349 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 296
>ref|XM_506877.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1626_B09.4 mRNA Length = 990 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 830 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 771 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 770 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 711 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 710 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 651 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 650 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 591 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 590 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 531 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 530 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 471 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 470 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 411 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 410 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 351 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 350 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 297
>dbj|AK106210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G07, full insert sequence Length = 976 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 829 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 770 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 769 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 710 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 709 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 650 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 649 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 590 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 589 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 530 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 470 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 469 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 410 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 409 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 350 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 349 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 296
>dbj|AK059769.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H03, full insert sequence Length = 995 Score = 718 bits (362), Expect = 0.0 Identities = 491/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 829 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 770 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 769 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 710 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 709 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 650 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 649 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 590 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 589 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 530 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 470 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 469 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 410 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 409 ctgctgtgcttgtttccgactttttctcacaagaacacggaaatcgggacccatcccact 350 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 349 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 296
>dbj|AK068583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157B01, full insert sequence Length = 989 Score = 710 bits (358), Expect = 0.0 Identities = 491/534 (91%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 829 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 770 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 769 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 710 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 709 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 650 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 649 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 590 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 589 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 530 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 529 aatcaataatgatactccaaatggtcttacaccaccagactgtgtgaactcctgcataac 470 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 469 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 410 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 409 ctgctgtgcttg-ttccgactttttctcacaagaacacggaaatcgggacccatcccact 351 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 350 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 297
>dbj|AK072855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P05, full insert sequence Length = 1127 Score = 702 bits (354), Expect = 0.0 Identities = 489/534 (91%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacg 184 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 814 ttactccacctcttccaagaaatccttgatctctgccggggttagaactttgaattcacg 755 Query: 185 gtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttc 244 ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 754 gtcagatcgaataactccaatttcaatattgttggctgagatttgaccctcatatccttc 695 Query: 245 tttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatct 304 ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 694 tttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtcttctgtgtatct 635 Query: 305 tttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaaga 364 ||| |||||||||||||||||||| || |||||||||||||| |||||||||||||| || Sbjct: 634 tttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctttccagga 575 Query: 365 gaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagc 424 |||||| |||||||| |||||||||||||||| ||| || ||||||||||| ||||| || Sbjct: 574 gaagtatgatcctgagggatcaacctgatacagctgtgggccattgtcatcgtacccggc 515 Query: 425 aatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataac 484 |||||| | |||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 514 aatcaataatgatactccaaatggtcttacaccaccagactgcgtgaactcctgcataac 455 Query: 485 agcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataata 544 ||||||||| |||| ||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 454 agcagcagtttctcggacaagctgagtaacagggatagtttccttgtacaaccgataata 395 Query: 545 ctgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||||||| || ||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 394 ctgctgtgcttgtctccgactttttctcacaagaacacggaaatcgggacccatcccact 335 Query: 605 gtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttc 658 ||||||||||||||| || ||||||| |||||||||||| |||||||||||||| Sbjct: 334 gtagacaactccaatgttcggagtcaatgactgaatcttttgcacagatgtttc 281
>gb|AY103549.1| Zea mays PCO151018 mRNA sequence Length = 1337 Score = 638 bits (322), Expect = e-180 Identities = 487/542 (89%) Strand = Plus / Minus Query: 122 agcttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattc 181 ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 1038 agcttactccacctcttccaagaaatccttgatctctgctgggcttaaaactttgaactc 979 Query: 182 acggtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatcc 241 ||| ||||| || |||| ||| |||||||||||||||| || ||||| || |||||||| Sbjct: 978 acgatcagctcgaataattccgatttcaatgttgttggaggaaatttgcccctcatatcc 919 Query: 242 ttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgta 301 |||||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 918 ttctttcaaagtcaaaattgcagtgtggatggcatcatcaagctccatatcttctgtgta 859 Query: 302 tcttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttcca 361 ||| || |||||||| ||||||||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 858 tctcttttcaagaaacgtctttgcattggacacattttttcccatggctgatgccttcca 799 Query: 362 agagaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcataccc 421 |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 798 ggagaagtatgatcctgagggatcaacctgatacaactgcgggccattgtcatcataccc 739 Query: 422 agcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcat 481 |||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||| Sbjct: 738 agcaatcaacagtgatactccaaatggtctcacaccacctgactgtgtgaactcctgcat 679 Query: 482 aacagcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgata 541 |||||||||||||| | |||||||| || || || || ||||||||||||||||| Sbjct: 678 cacagcagcagtctcccgcacaagctgtgttacaggtatatgctccttgtacaaccgata 619 Query: 542 atactgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatccc 601 |||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 618 atactgctgtgcctgctttcgactttttctcaccagaacacgaaaatctggacccatccc 559 Query: 602 actgtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtc 661 ||| |||||||||||||||||||| || |||| ||||||||| |||||||||||||| || Sbjct: 558 actatagacaactccaatatttggtgttagtgcctgaatcttttgcacagatgtttcatc 499 Query: 662 ca 663 || Sbjct: 498 ca 497
>dbj|AK101195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030J15, full insert sequence Length = 1123 Score = 624 bits (315), Expect = e-176 Identities = 480/535 (89%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacggtca 188 |||||||| ||||||||||||||||||||||| ||| | | ||| ||||||||||||||| Sbjct: 824 tccacctcttccaagaaatccttgatctctgcagggctcagaaccttgaattcacggtca 765 Query: 189 gcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttctttc 248 | ||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 764 gatcggattatcccaatttcaatgttgttggcggagatttgtccttcatatccttctttc 705 Query: 249 agagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttc 308 ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 704 agagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtgtatcttttc 645 Query: 309 tcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaag 368 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 644 tcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccaggagaag 585 Query: 369 taagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatc 428 || || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 584 tatgaccctgatggatcaacctggtacaattggggaccattgtcatcatacccagcaatc 525 Query: 429 aacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagca 488 |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 524 aacaaagatacaccaaatggtcttacaccaccagattgtgtaaactcctgcatgacagca 465 Query: 489 gcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgc 548 ||||| |||| ||| ||||| || || || || ||||||||||||| ||||||||||| Sbjct: 464 gcagtttctcggactagctgtgtaacaggtatagtttccttgtacagacgataatactgt 405 Query: 549 tgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtag 608 ||||| ||||| |||||||| || || | |||||| || || || ||||| ||||||||| Sbjct: 404 tgtgcttgctttcgacttttcctcactaaaacacggaagtctggccccatgccactgtag 345 Query: 609 acaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtcca 663 ||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 344 acaacaccaatatttggagtcaacgactgaatcttttgcacagatgtttcatcca 290
>dbj|AK058567.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E04, full insert sequence Length = 1133 Score = 624 bits (315), Expect = e-176 Identities = 480/535 (89%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacggtca 188 |||||||| ||||||||||||||||||||||| ||| | | ||| ||||||||||||||| Sbjct: 835 tccacctcttccaagaaatccttgatctctgcagggctcagaaccttgaattcacggtca 776 Query: 189 gcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttctttc 248 | ||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 775 gatcggattatcccaatttcaatgttgttggcggagatttgtccttcatatccttctttc 716 Query: 249 agagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttc 308 ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 715 agagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtgtatcttttc 656 Query: 309 tcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaag 368 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 655 tcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccaggagaag 596 Query: 369 taagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatc 428 || || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 595 tatgaccctgatggatcaacctggtacaattggggaccattgtcatcatacccagcaatc 536 Query: 429 aacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagca 488 |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 535 aacaaagatacaccaaatggtcttacaccaccagattgtgtaaactcctgcatgacagca 476 Query: 489 gcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgc 548 ||||| |||| ||| ||||| || || || || ||||||||||||| ||||||||||| Sbjct: 475 gcagtttctcggactagctgtgtaacaggtatagtttccttgtacagacgataatactgt 416 Query: 549 tgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtag 608 ||||| ||||| |||||||| || || | |||||| || || || ||||| ||||||||| Sbjct: 415 tgtgcttgctttcgacttttcctcactaaaacacggaagtctggccccatgccactgtag 356 Query: 609 acaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtcca 663 ||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 355 acaacaccaatatttggagtcaacgactgaatcttttgcacagatgtttcatcca 301
>dbj|AB026559.1| Oryza sativa (japonica cultivar-group) OsPAB1 mRNA for alpha 2 subunit of 20S proteasome, complete cds Length = 1124 Score = 624 bits (315), Expect = e-176 Identities = 480/535 (89%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacggtca 188 |||||||| ||||||||||||||||||||||| ||| | | ||| ||||||||||||||| Sbjct: 800 tccacctcttccaagaaatccttgatctctgcagggctcagaaccttgaattcacggtca 741 Query: 189 gcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttctttc 248 | ||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 740 gatcggattatcccaatttcaatgttgttggcggagatttgtccttcatatccttctttc 681 Query: 249 agagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttc 308 ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 680 agagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtgtatcttttc 621 Query: 309 tcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaag 368 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 620 tcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccaggagaag 561 Query: 369 taagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatc 428 || || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 560 tatgaccctgatggatcaacctggtacaattggggaccattgtcatcatacccagcaatc 501 Query: 429 aacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagca 488 |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 500 aacaaagatacaccaaatggtcttacaccaccagattgtgtaaactcctgcatgacagca 441 Query: 489 gcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgc 548 ||||| |||| ||| ||||| || || || || ||||||||||||| ||||||||||| Sbjct: 440 gcagtttctcggactagctgtgtaacaggtatagtttccttgtacagacgataatactgt 381 Query: 549 tgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtag 608 ||||| ||||| |||||||| || || | |||||| || || || ||||| ||||||||| Sbjct: 380 tgtgcttgctttcgacttttcctcactaaaacacggaagtctggccccatgccactgtag 321 Query: 609 acaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtcca 663 ||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 320 acaacaccaatatttggagtcaacgactgaatcttttgcacagatgtttcatcca 266
>gb|BT018050.1| Zea mays clone EL01N0531E05.c mRNA sequence Length = 863 Score = 611 bits (308), Expect = e-171 Identities = 482/540 (89%) Strand = Plus / Minus Query: 124 cttactccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcac 183 ||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||| |||| Sbjct: 623 cttactccacctcttccaagaaatccttgatctctaatgggcttagaactttgaactcac 564 Query: 184 ggtcagcccggataactccaatttcaatgttgttggcagagatttgaccttcatatcctt 243 ||||||| || |||| ||| |||||||||||||||| || ||||| || |||||||||| Sbjct: 563 ggtcagctcgaataattccgatttcaatgttgttggaggaaatttgcccctcatatcctt 504 Query: 244 ctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatc 303 |||||| ||||||||||||||| || |||||||||||||| |||||||| || ||||||| Sbjct: 503 ctttcaaagtcaaaattgcagtgtggatggcatcatcaagttccatatcctctgtgtatc 444 Query: 304 ttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaag 363 | || |||||||||||||||||||||||||||||||| ||||| |||||||| ||||| | Sbjct: 443 tcttttcaagaaatgtctttgcatttgacacattttttcccatggctgatgccttccagg 384 Query: 364 agaagtaagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccag 423 ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||| Sbjct: 383 agaagtatgatcctgagggatcaacctgatacaactgtgggccattgtcatcatacccag 324 Query: 424 caatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataa 483 |||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| | Sbjct: 323 caatcaacagtgatactccaaatggtcttacaccacctgactgtgtgaactcctgcatca 264 Query: 484 cagcagcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataat 543 ||||||||||||| | |||||||| || || || || ||||||||||||||||||| Sbjct: 263 cagcagcagtctcccgcacaagctgtgttacaggtatatgctccttgtacaaccgataat 204 Query: 544 actgctgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccac 603 |||| ||||||||||| ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 203 actgttgtgcctgctttcgactttttctcaccagaacacgaaaatctggacccatcccac 144 Query: 604 tgtagacaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtcca 663 | |||||||||||||||||||| || |||| ||||||||| |||||||||||||| |||| Sbjct: 143 tatagacaactccaatatttggtgttagtgcctgaatcttttgcacagatgtttcatcca 84 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tgtcactggagcaaatcagtttac 31 |||| ||||||||||||||||||| Sbjct: 780 tgtcgctggagcaaatcagtttac 757 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tgtcactggagcaaatcagtttac 31 |||| ||||||||||||||||||| Sbjct: 736 tgtcgctggagcaaatcagtttac 713
>gb|AF022735.1|AF022735 Oryza sativa proteasome component mRNA, complete cds Length = 1108 Score = 474 bits (239), Expect = e-130 Identities = 462/535 (86%), Gaps = 1/535 (0%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgccggggttaaaactttgaattcacggtca 188 |||||||| ||||||||| ||||||||||||| ||| | | ||| |||||||||||||| Sbjct: 783 tccacctcttccaagaaa-ccttgatctctgcggggctcagaaccttgaattcacggtcg 725 Query: 189 gcccggataactccaatttcaatgttgttggcagagatttgaccttcatatccttctttc 248 | ||||| | |||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 724 gatcggattatcccaatttcgatgttgttggcggagatttgtccttcatatccttctttc 665 Query: 249 agagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttc 308 ||| | ||||| |||||||||||||||| || |||||||||||||| |||| ||||||| Sbjct: 664 agaattaaaataccagtatgaatggcatcgtcgagctccatatcttctgtgtgtcttttc 605 Query: 309 tcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaag 368 ||||||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||| Sbjct: 604 tcaagaaatgtttttgcattagacacatttttccccatagccgatgctttccaggagaag 545 Query: 369 taagatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatc 428 || || || |||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 544 tatgacccggatggatcaacctggtacaattggggaccattgtcatcatacccagcaatc 485 Query: 429 aacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagca 488 |||| ||||||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct: 484 aacaaagatacaccaaatggtcttacaccaccagattgtgtaaattcctgcatgacagca 425 Query: 489 gcagtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgc 548 ||||| |||| ||| ||||| || || || || ||||||||||||| ||| || |||| Sbjct: 424 gcagtttctcggactagctgtgtaacaggcatagtttccttgtacagacgacaacactgt 365 Query: 549 tgtgcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtag 608 ||||| ||||| ||||||| || || | |||||| || || || ||||| ||||||||| Sbjct: 364 tgtgcttgctttggacttttcctcactaaaacacggaagtctggccccatgccactgtag 305 Query: 609 acaactccaatatttggagtcagtgactgaatcttctgcacagatgtttcgtcca 663 || || |||| ||||||||||| |||||||| || |||||||||||||| |||| Sbjct: 304 acgacaccaacatttggagtcaacgactgaattttttgcacagatgtttcatcca 250
>gb|DQ228337.1| Solanum tuberosum clone 146B04 unknown mRNA Length = 1089 Score = 226 bits (114), Expect = 7e-56 Identities = 318/386 (82%) Strand = Plus / Minus Query: 273 gcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgcatttgac 332 ||||||||||| |||| || |||||||| || ||||| ||||||||||||||||| ||| Sbjct: 706 gcatcatcaagttccaattcctcggtgtacctcttctctagaaatgtctttgcattggac 647 Query: 333 acatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatcaacctga 392 ||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||| |||||| Sbjct: 646 acattcttccccatggctgaggccttccaagagaagtaagaacctgaaggatccacctga 587 Query: 393 tacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaatggtctt 452 || | || ||||| |||||||||||||| |||| ||| ||||| ||||| ||||| ||| Sbjct: 586 tatagttgaggacccttgtcatcataccccgcaaccaagagtgaaacaccgaatggcctt 527 Query: 453 acaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctgggtc 512 |||||||| ||||| ||||| |||||||| ||||||||||| || || || || || || Sbjct: 526 acaccacctgattgggtgaattcctgcatgacagcagcagtttccctcaccagttgtgtg 467 Query: 513 accgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactttttcta 572 || || || | ||| || || | |||||||| |||| |||||||| | |||||||| Sbjct: 466 acaggtattgattctttatagagtcgataatattgctcagcctgctttctactttttcgc 407 Query: 573 acaagaacacgaaaatccggacccatcccactgtagacaactccaatatttggagtcagt 632 || | ||| ||| |||| || ||||| || ||||| || |||||||||||||| |||| Sbjct: 406 accaaaactcgagaatcagggcccatgccgctgtaaactactccaatatttggtgtcaaa 347 Query: 633 gactgaatcttctgcacagatgtttc 658 | ||||||||| |||||||||||||| Sbjct: 346 gtctgaatcttttgcacagatgtttc 321
>gb|DQ207872.1| Solanum tuberosum clone 088G02 unknown mRNA Length = 1104 Score = 226 bits (114), Expect = 7e-56 Identities = 318/386 (82%) Strand = Plus / Minus Query: 273 gcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgcatttgac 332 ||||||||||| |||| || |||||||| || ||||| ||||||||||||||||| ||| Sbjct: 721 gcatcatcaagttccaattcctcggtgtacctcttctctagaaatgtctttgcattggac 662 Query: 333 acatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatcaacctga 392 ||||| |||||||| ||||| || ||||||||||||||||| ||||| ||||| |||||| Sbjct: 661 acattcttccccatggctgaggccttccaagagaagtaagaacctgaaggatccacctga 602 Query: 393 tacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaatggtctt 452 || | || ||||| |||||||||||||| |||| ||| ||||| ||||| ||||| ||| Sbjct: 601 tatagttgaggacccttgtcatcataccccgcaaccaagagtgaaacaccgaatggcctt 542 Query: 453 acaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctgggtc 512 |||||||| ||||| ||||| |||||||| ||||||||||| || || || || || || Sbjct: 541 acaccacctgattgggtgaattcctgcatgacagcagcagtttccctcaccagttgtgtg 482 Query: 513 accgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactttttcta 572 || || || | ||| || || | |||||||| |||| |||||||| | |||||||| Sbjct: 481 acaggtattgattctttatagagtcgataatattgctcagcctgctttctactttttcgc 422 Query: 573 acaagaacacgaaaatccggacccatcccactgtagacaactccaatatttggagtcagt 632 || | ||| ||| |||| || ||||| || ||||| || |||||||||||||| |||| Sbjct: 421 accaaaactcgagaatcagggcccatgccgctgtaaactactccaatatttggtgtcaaa 362 Query: 633 gactgaatcttctgcacagatgtttc 658 | ||||||||| |||||||||||||| Sbjct: 361 gtctgaatcttttgcacagatgtttc 336
>ref|NM_001035980.1| Arabidopsis thaliana PAB1; endopeptidase/ peptidase/ threonine endopeptidase AT1G16470 (PAB1) transcript variant AT1G16470.2 mRNA, complete cds Length = 1196 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 850 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 791 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 790 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 731 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 730 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 671 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 670 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 611 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 610 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 551 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 550 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 491 Query: 627 gtca 630 |||| Sbjct: 490 gtca 487
>ref|NM_101512.2| Arabidopsis thaliana PAB1; endopeptidase/ peptidase/ threonine endopeptidase AT1G16470 (PAB1) transcript variant AT1G16470.1 mRNA, complete cds Length = 1045 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 699 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 640 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 639 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 580 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 579 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 520 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 519 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 460 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 459 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 400 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 399 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 340 Query: 627 gtca 630 |||| Sbjct: 339 gtca 336
>emb|Y13176.1|ATY13176 Arabidopsis thaliana mRNA for proteasome subunit prc3 Length = 1006 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 686 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 627 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 626 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 567 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 566 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 507 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 506 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 447 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 446 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 387 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 386 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 327 Query: 627 gtca 630 |||| Sbjct: 326 gtca 323
>gb|AF332467.1| Arabidopsis thaliana clone C00186 (e) putative multicatalytic endopeptidase (At1g16470) mRNA, complete cds Length = 708 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 566 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 507 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 506 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 447 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 446 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 387 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 386 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 327 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 326 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 267 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 266 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 207 Query: 627 gtca 630 |||| Sbjct: 206 gtca 203
>gb|AY088628.1| Arabidopsis thaliana clone 8633 mRNA, complete sequence Length = 1004 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 699 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 640 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 639 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 580 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 579 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 520 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 519 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 460 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 459 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 400 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 399 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 340 Query: 627 gtca 630 |||| Sbjct: 339 gtca 336
>gb|AF043520.1|AF043520 Arabidopsis thaliana 20S proteasome subunit PAB1 (PAB1) mRNA, complete cds Length = 1006 Score = 206 bits (104), Expect = 7e-50 Identities = 299/364 (82%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 686 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 627 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 626 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 567 Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||||||||| || ||||| ||||||||||| ||||| | || || || || || || Sbjct: 566 acctgatacaattgtggacccttgtcatcatatccagccaccagcaaggaaaccccgaaa 507 Query: 447 ggtcttacaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagc 506 || || ||||| || ||||| || ||||| |||||||||| ||| || || || ||||| Sbjct: 506 ggcctaacacctcccgattgagtaaactcttgcataacagtagcggtttcccttacaagt 447 Query: 507 tgggtcaccgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactt 566 ||||| || ||||||| ||| ||||||| ||| ||| |||| ||||| |||| ||| Sbjct: 446 tgggtaacagggatgggttctttgtacagacgaagatattgctcagcctgtttcctactc 387 Query: 567 tttctaacaagaacacgaaaatccggacccatcccactgtagacaactccaatatttgga 626 || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 386 ttcctaacaagaactcgaaaatcaggacccatgccactgtaaacaactccaatattagga 327 Query: 627 gtca 630 |||| Sbjct: 326 gtca 323
>gb|BT013129.1| Lycopersicon esculentum clone 114421R, mRNA sequence Length = 1106 Score = 202 bits (102), Expect = 1e-48 Identities = 312/382 (81%) Strand = Plus / Minus Query: 273 gcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgcatttgac 332 |||||||| |||||||| || || |||||||| ||||| ||||||||||| ||||| || Sbjct: 662 gcatcatcgagctccatttcctccgtgtatctcttctcgagaaatgtcttggcattagag 603 Query: 333 acatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatcaacctga 392 ||||| || ||||| ||||| || |||||||||||||| || || ||||||||||||||| Sbjct: 602 acattctttcccattgctgaagccttccaagagaagtacgaaccagatggatcaacctga 543 Query: 393 tacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaatggtctt 452 || | || ||||| ||||||||| | || |||| ||| ||||| ||||||||||||||| Sbjct: 542 tatagttgtggacccttgtcatcaaaacccgcaaccaagagtgaaacaccaaatggtctt 483 Query: 453 acaccaccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctgggtc 512 |||||||| ||||| ||||| |||||||| ||||||||||| || || || || || || Sbjct: 482 acaccacctgattgggtgaattcctgcatgacagcagcagtttccctcaccagttgagtg 423 Query: 513 accgggatggtttccttgtacaaccgataatactgctgtgcctgcttccgactttttcta 572 || ||||| | ||| || || | || ||||| |||| || ||||| |||||| | | Sbjct: 422 acagggattggttctttatagagtcggtaatattgctcagctgacttcctacttttccga 363 Query: 573 acaagaacacgaaaatccggacccatcccactgtagacaactccaatatttggagtcagt 632 || | ||| ||| |||| |||||||| |||||||| |||||||||||||||| |||| Sbjct: 362 accaaaactcgagaatcaggacccatgccactgtacacaactccaatatttgatgtcaaa 303 Query: 633 gactgaatcttctgcacagatg 654 | |||||| ||||||||||||| Sbjct: 302 gtctgaattttctgcacagatg 281
>ref|NM_106572.4| Arabidopsis thaliana endopeptidase/ threonine endopeptidase AT1G79210 mRNA, complete cds Length = 996 Score = 188 bits (95), Expect = 2e-44 Identities = 308/379 (81%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttctca 311 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 677 gtcaatattgccgtgtgaatggcatcatcaagttccatatcttctgtgtacctcttctca 618 Query: 312 agaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaagtaa 371 ||||| ||||||||||| || ||||| || ||||| || || |||||||| ||||| ||| Sbjct: 617 agaaacgtctttgcattcgaaacattctttcccattgcagaagctttccatgagaaataa 558 Query: 372 gatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatcaac 431 || || |||||||| || ||||||| || ||||| ||||||||||||||||| | || Sbjct: 557 gagccagatggatccacttgatacagttgtggacccttgtcatcatacccagccaccagt 498 Query: 432 agtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagca 491 || || || ||||| || || |||||||| ||||| |||||||| ||||| || | ||| Sbjct: 497 agagaaactccaaacggcctaacaccacccgattgagtgaactcttgcatcaccgtggca 438 Query: 492 gtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgctgt 551 || || || ||||| || || || ||||||| ||||||||||| || ||| |||| Sbjct: 437 gtttcccttacaagttgagtaacggggatgggttccttgtacagacggagatattgctca 378 Query: 552 gcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtagaca 611 |||||||||| ||| |||| |||||||| || ||||| |||||||| |||||||| ||| Sbjct: 377 gcctgcttcctactctttcgcacaagaactcggaaatcaggacccataccactgtaaaca 318 Query: 612 actccaatatttggagtca 630 |||||| || ||||||| Sbjct: 317 gttccaatgttgggagtca 299
>gb|AY122893.1| Arabidopsis thaliana At1g79210/YUP8H12R_1 mRNA, complete cds Length = 708 Score = 188 bits (95), Expect = 2e-44 Identities = 308/379 (81%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttctca 311 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 581 gtcaatattgccgtgtgaatggcatcatcaagttccatatcttctgtgtacctcttctca 522 Query: 312 agaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaagtaa 371 ||||| ||||||||||| || ||||| || ||||| || || |||||||| ||||| ||| Sbjct: 521 agaaacgtctttgcattcgaaacattctttcccattgcagaagctttccatgagaaataa 462 Query: 372 gatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatcaac 431 || || |||||||| || ||||||| || ||||| ||||||||||||||||| | || Sbjct: 461 gagccagatggatccacttgatacagttgtggacccttgtcatcatacccagccaccagt 402 Query: 432 agtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagca 491 || || || ||||| || || |||||||| ||||| |||||||| ||||| || | ||| Sbjct: 401 agagaaactccaaacggcctaacaccacccgattgagtgaactcttgcatcaccgtggca 342 Query: 492 gtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgctgt 551 || || || ||||| || || || ||||||| ||||||||||| || ||| |||| Sbjct: 341 gtttcccttacaagttgagtaacggggatgggttccttgtacagacggagatattgctca 282 Query: 552 gcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtagaca 611 |||||||||| ||| |||| |||||||| || ||||| |||||||| |||||||| ||| Sbjct: 281 gcctgcttcctactctttcgcacaagaactcggaaatcaggacccataccactgtaaaca 222 Query: 612 actccaatatttggagtca 630 |||||| || ||||||| Sbjct: 221 gttccaatgttgggagtca 203
>gb|AY094433.1| Arabidopsis thaliana At1g79210/YUP8H12R_1 mRNA, complete cds Length = 979 Score = 188 bits (95), Expect = 2e-44 Identities = 308/379 (81%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttctca 311 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 660 gtcaatattgccgtgtgaatggcatcatcaagttccatatcttctgtgtacctcttctca 601 Query: 312 agaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaagtaa 371 ||||| ||||||||||| || ||||| || ||||| || || |||||||| ||||| ||| Sbjct: 600 agaaacgtctttgcattcgaaacattctttcccattgcagaagctttccatgagaaataa 541 Query: 372 gatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatcaac 431 || || |||||||| || ||||||| || ||||| ||||||||||||||||| | || Sbjct: 540 gagccagatggatccacttgatacagttgtggacccttgtcatcatacccagccaccagt 481 Query: 432 agtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagca 491 || || || ||||| || || |||||||| ||||| |||||||| ||||| || | ||| Sbjct: 480 agagaaactccaaacggcctaacaccacccgattgagtgaactcttgcatcaccgtggca 421 Query: 492 gtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgctgt 551 || || || ||||| || || || ||||||| ||||||||||| || ||| |||| Sbjct: 420 gtttcccttacaagttgagtaacggggatgggttccttgtacagacggagatattgctca 361 Query: 552 gcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtagaca 611 |||||||||| ||| |||| |||||||| || ||||| |||||||| |||||||| ||| Sbjct: 360 gcctgcttcctactctttcgcacaagaactcggaaatcaggacccataccactgtaaaca 301 Query: 612 actccaatatttggagtca 630 |||||| || ||||||| Sbjct: 300 gttccaatgttgggagtca 282
>emb|BX815040.1|CNS0ACYJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 188 bits (95), Expect = 2e-44 Identities = 308/379 (81%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttctca 311 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| || |||||| Sbjct: 677 gtcaatattgccgtgtgaatggcatcatcaagttccatatcttctgtgtacctcttctca 618 Query: 312 agaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagagaagtaa 371 ||||| ||||||||||| || ||||| || ||||| || || |||||||| ||||| ||| Sbjct: 617 agaaacgtctttgcattcgaaacattctttcccattgcagaagctttccatgagaaataa 558 Query: 372 gatcctgatggatcaacctgatacaactgcggaccattgtcatcatacccagcaatcaac 431 || || |||||||| || ||||||| || ||||| ||||||||||||||||| | || Sbjct: 557 gagccagatggatccacttgatacagttgtggacccttgtcatcatacccagccaccagt 498 Query: 432 agtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagca 491 || || || ||||| || || |||||||| ||||| |||||||| ||||| || | ||| Sbjct: 497 agagaaactccaaacggcctaacaccacccgattgagtgaactcttgcatcaccgtggca 438 Query: 492 gtctctctgacaagctgggtcaccgggatggtttccttgtacaaccgataatactgctgt 551 || || || ||||| || || || ||||||| ||||||||||| || ||| |||| Sbjct: 437 gtttcccttacaagttgagtaacggggatgggttccttgtacagacggagatattgctca 378 Query: 552 gcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccactgtagaca 611 |||||||||| ||| |||| |||||||| || ||||| |||||||| |||||||| ||| Sbjct: 377 gcctgcttcctactctttcgcacaagaactcggaaatcaggacccataccactgtaaaca 318 Query: 612 actccaatatttggagtca 630 |||||| || ||||||| Sbjct: 317 gttccaatgttgggagtca 299
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 143 bits (72), Expect = 8e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 303 cttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaa 362 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 75773 cttttctcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccag 75832 Query: 363 gagaagtaagatcctgatggatcaacct 390 |||||||| || |||||||||||||||| Sbjct: 75833 gagaagtatgaccctgatggatcaacct 75860 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 76018 acctggtacaattggggaccattgtcatcatacccagcaatcaacaaagatacaccaaat 76077 Query: 447 ggtcttacaccac 459 ||||||||||||| Sbjct: 76078 ggtcttacaccac 76090 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 240 ccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtg 299 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 75492 ccttctttcagagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtg 75551 Query: 300 tatct 304 ||||| Sbjct: 75552 tatct 75556 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 174 ttgaattcacggtcagcccggataactccaatttcaatgttgttggcagagatttgacct 233 |||||||||||||||| ||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 75345 ttgaattcacggtcagatcggattatcccaatttcaatgttgttggcggagatttgtcct 75404 Query: 234 tcatatc 240 ||||||| Sbjct: 75405 tcatatc 75411 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 77347 ctgtagacaacaccaatatttggagtcaacgactgaatcttttgcac 77393 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 459 ccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctg 508 ||||||||||| ||||||||||| ||||||||||| |||| ||| ||||| Sbjct: 76383 ccagattgtgtaaactcctgcatgacagcagcagtttctcggactagctg 76432 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 129 tccacctcctccaagaaatccttgatctctgc 160 |||||||| ||||||||||||||||||||||| Sbjct: 74900 tccacctcttccaagaaatccttgatctctgc 74931 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Plus Query: 526 ccttgtacaaccgataatactgctgtgcctgcttccgactttttctaacaagaacacgaa 585 ||||||||| ||||||||||| ||||| ||||| |||||||| || || | |||||| | Sbjct: 76611 ccttgtacagacgataatactgttgtgcttgctttcgacttttcctcactaaaacacgga 76670 Query: 586 aatccggacccatcccactg 605 | || || ||||| |||||| Sbjct: 76671 agtctggccccatgccactg 76690
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 8e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 303 cttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaa 362 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 15261575 cttttctcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccag 15261516 Query: 363 gagaagtaagatcctgatggatcaacct 390 |||||||| || |||||||||||||||| Sbjct: 15261515 gagaagtatgaccctgatggatcaacct 15261488 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 15261330 acctggtacaattggggaccattgtcatcatacccagcaatcaacaaagatacaccaaat 15261271 Query: 447 ggtcttacaccac 459 ||||||||||||| Sbjct: 15261270 ggtcttacaccac 15261258 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 240 ccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtg 299 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 15261856 ccttctttcagagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtg 15261797 Query: 300 tatct 304 ||||| Sbjct: 15261796 tatct 15261792 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 174 ttgaattcacggtcagcccggataactccaatttcaatgttgttggcagagatttgacct 233 |||||||||||||||| ||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 15262003 ttgaattcacggtcagatcggattatcccaatttcaatgttgttggcggagatttgtcct 15261944 Query: 234 tcatatc 240 ||||||| Sbjct: 15261943 tcatatc 15261937 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 15260001 ctgtagacaacaccaatatttggagtcaacgactgaatcttttgcac 15259955 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 459 ccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctg 508 ||||||||||| ||||||||||| ||||||||||| |||| ||| ||||| Sbjct: 15260965 ccagattgtgtaaactcctgcatgacagcagcagtttctcggactagctg 15260916 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgc 160 |||||||| ||||||||||||||||||||||| Sbjct: 15262448 tccacctcttccaagaaatccttgatctctgc 15262417 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Minus Query: 526 ccttgtacaaccgataatactgctgtgcctgcttccgactttttctaacaagaacacgaa 585 ||||||||| ||||||||||| ||||| ||||| |||||||| || || | |||||| | Sbjct: 15260737 ccttgtacagacgataatactgttgtgcttgctttcgacttttcctcactaaaacacgga 15260678 Query: 586 aatccggacccatcccactg 605 | || || ||||| |||||| Sbjct: 15260677 agtctggccccatgccactg 15260658
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 8e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 303 cttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaa 362 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 15256109 cttttctcaagaaatgtctttgcatttgacacatttttccccatagctgatgctttccag 15256050 Query: 363 gagaagtaagatcctgatggatcaacct 390 |||||||| || |||||||||||||||| Sbjct: 15256049 gagaagtatgaccctgatggatcaacct 15256022 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 ||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 15255864 acctggtacaattggggaccattgtcatcatacccagcaatcaacaaagatacaccaaat 15255805 Query: 447 ggtcttacaccac 459 ||||||||||||| Sbjct: 15255804 ggtcttacaccac 15255792 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 240 ccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtg 299 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 15256390 ccttctttcagagttaaaatagcagtatgaatggcatcgtcaagctccatatcttctgtg 15256331 Query: 300 tatct 304 ||||| Sbjct: 15256330 tatct 15256326 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 174 ttgaattcacggtcagcccggataactccaatttcaatgttgttggcagagatttgacct 233 |||||||||||||||| ||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 15256537 ttgaattcacggtcagatcggattatcccaatttcaatgttgttggcggagatttgtcct 15256478 Query: 234 tcatatc 240 ||||||| Sbjct: 15256477 tcatatc 15256471 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct: 15254535 ctgtagacaacaccaatatttggagtcaacgactgaatcttttgcac 15254489 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 459 ccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctg 508 ||||||||||| ||||||||||| ||||||||||| |||| ||| ||||| Sbjct: 15255499 ccagattgtgtaaactcctgcatgacagcagcagtttctcggactagctg 15255450 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 129 tccacctcctccaagaaatccttgatctctgc 160 |||||||| ||||||||||||||||||||||| Sbjct: 15256982 tccacctcttccaagaaatccttgatctctgc 15256951 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Minus Query: 526 ccttgtacaaccgataatactgctgtgcctgcttccgactttttctaacaagaacacgaa 585 ||||||||| ||||||||||| ||||| ||||| |||||||| || || | |||||| | Sbjct: 15255271 ccttgtacagacgataatactgttgtgcttgctttcgacttttcctcactaaaacacgga 15255212 Query: 586 aatccggacccatcccactg 605 | || || ||||| |||||| Sbjct: 15255211 agtctggccccatgccactg 15255192
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 298 tgtatcttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctt 357 |||| ||||| |||||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 25476268 tgtaccttttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctt 25476209 Query: 358 tccaagagaagtaagatcctgatggatcaacctg 391 |||| |||||||| |||||||| ||||||||||| Sbjct: 25476208 tccaggagaagtatgatcctgagggatcaacctg 25476175 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 526 ccttgtacaaccgataatactgctgtgcctgcttccgactttttctaacaagaacacgaa 585 |||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| | Sbjct: 25474998 ccttgtacaaccgataatactgctgtgcttgtttccgactttttctcacaagaacacgga 25474939 Query: 586 aatccggacccatcccactg 605 |||| ||||||||||||||| Sbjct: 25474938 aatcgggacccatcccactg 25474919 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 235 catatccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatctt 294 |||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 25476485 catacccttctttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtctt 25476426 Query: 295 cggtgtatct 304 | |||||||| Sbjct: 25476425 ctgtgtatct 25476416 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 174 ttgaattcacggtcagcccggataactccaatttcaatgttgttggcagagatttgacct 233 |||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||| Sbjct: 25476621 ttgaattcacggtcagatcgaataactccaatttcaatattgttggctgagatttgaccc 25476562 Query: 234 tcatatc 240 ||||||| Sbjct: 25476561 tcatatc 25476555 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 459 ccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctgggtcaccggg 518 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| || || ||| Sbjct: 25475243 ccagactgtgtgaactcctgcataacagcagcagtttctcggacaagctgagtaacaggg 25475184 Query: 519 atggtttcct 528 || ||||||| Sbjct: 25475183 atagtttcct 25475174 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaact 173 |||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 25476788 ttactccacctcttccaagaaatccttgatctctgccggggttagaact 25476740 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 |||||||||| ||| || ||||||||||| ||||| |||||||| | |||||| |||||| Sbjct: 25475933 acctgatacagctgtgggccattgtcatcgtacccggcaatcaataatgatactccaaat 25475874 Query: 447 ggtcttacaccac 459 ||||||||||||| Sbjct: 25475873 ggtcttacaccac 25475861 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 25474228 ctgtagacaactccaatgttcggagtcaatgactgaatcttttgcac 25474182
>dbj|AP004069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1626_B09 Length = 58749 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 298 tgtatcttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctt 357 |||| ||||| |||||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 20818 tgtaccttttttcaagaaatgtctttgcattggagacatttttccccatagctgatgctt 20759 Query: 358 tccaagagaagtaagatcctgatggatcaacctg 391 |||| |||||||| |||||||| ||||||||||| Sbjct: 20758 tccaggagaagtatgatcctgagggatcaacctg 20725 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 526 ccttgtacaaccgataatactgctgtgcctgcttccgactttttctaacaagaacacgaa 585 |||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| | Sbjct: 19548 ccttgtacaaccgataatactgctgtgcttgtttccgactttttctcacaagaacacgga 19489 Query: 586 aatccggacccatcccactg 605 |||| ||||||||||||||| Sbjct: 19488 aatcgggacccatcccactg 19469 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 235 catatccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctccatatctt 294 |||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 21035 catacccttctttcagagtcaaaatggcagtatggatggcatcatcaagctccatgtctt 20976 Query: 295 cggtgtatct 304 | |||||||| Sbjct: 20975 ctgtgtatct 20966 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 174 ttgaattcacggtcagcccggataactccaatttcaatgttgttggcagagatttgacct 233 |||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||| Sbjct: 21171 ttgaattcacggtcagatcgaataactccaatttcaatattgttggctgagatttgaccc 21112 Query: 234 tcatatc 240 ||||||| Sbjct: 21111 tcatatc 21105 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 459 ccagattgtgtgaactcctgcataacagcagcagtctctctgacaagctgggtcaccggg 518 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| || || ||| Sbjct: 19793 ccagactgtgtgaactcctgcataacagcagcagtttctcggacaagctgagtaacaggg 19734 Query: 519 atggtttcct 528 || ||||||| Sbjct: 19733 atagtttcct 19724 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 125 ttactccacctcctccaagaaatccttgatctctgccggggttaaaact 173 |||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 21338 ttactccacctcttccaagaaatccttgatctctgccggggttagaact 21290 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 387 acctgatacaactgcggaccattgtcatcatacccagcaatcaacagtgatacaccaaat 446 |||||||||| ||| || ||||||||||| ||||| |||||||| | |||||| |||||| Sbjct: 20483 acctgatacagctgtgggccattgtcatcgtacccggcaatcaataatgatactccaaat 20424 Query: 447 ggtcttacaccac 459 ||||||||||||| Sbjct: 20423 ggtcttacaccac 20411 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 18778 ctgtagacaactccaatgttcggagtcaatgactgaatcttttgcac 18732
>gb|BT000520.1| Arabidopsis thaliana multicatalytic endopeptidase complex (At1g16470/F3O9_27) mRNA, complete cds Length = 300 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 158 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 99 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 98 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 39 Query: 387 acct 390 |||| Sbjct: 38 acct 35
>gb|AF410305.1|AF410305 Arabidopsis thaliana At1g16470/F3O9_27 mRNA, complete cds Length = 546 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/124 (84%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctttgca 326 ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct: 240 tgaatggcatcgtcaagttccatgtcttctgtgtaccttttctcaaggaaggtttttgca 181 Query: 327 tttgacacatttttccccatcgctgatgctttccaagagaagtaagatcctgatggatca 386 || || || || |||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 180 ttagaaacgttcttccccatggctgaagctttccaggagaaataagagccagatggatcc 121 Query: 387 acct 390 |||| Sbjct: 120 acct 117
>emb|BX815506.1|CNS0AEFT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 89.7 bits (45), Expect = 1e-14 Identities = 93/109 (85%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgtatcttttctca 311 ||||| ||||| || ||||| ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 703 gtcaatattgccgtgtgaatagcatcatcaagttccatatcttctgtgtacctcttctca 644 Query: 312 agaaatgtctttgcatttgacacatttttccccatcgctgatgctttcc 360 ||||| ||||||||||| || ||||| || ||||| || || ||||||| Sbjct: 643 agaaacgtctttgcattcgaaacattctttcccattgcagaagctttcc 595
>emb|CR387901.1| Gallus gallus finished cDNA, clone ChEST179e13 Length = 1076 Score = 85.7 bits (43), Expect = 2e-13 Identities = 105/123 (85%), Gaps = 2/123 (1%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtcttt 323 |||||||||||||| |||||||||| |||||| |||||||||||||||| ||||| ||| Sbjct: 642 gtatgaatggcatcttcaagctccaaatcttcattgtatcttttctcaaggaatgt-ttt 584 Query: 324 gcatttgaca-catttttccccatcgctgatgctttccaagagaagtaagatcctgatgg 382 | |||||| |||||| |||||||||| ||||||||||| || |||| ||| ||||| Sbjct: 583 cccattgacataattttttcccatcgctgttgctttccaagcaaaataagctccagatgg 524 Query: 383 atc 385 ||| Sbjct: 523 atc 521
>emb|CR353531.1| Gallus gallus finished cDNA, clone ChEST133c11 Length = 956 Score = 85.7 bits (43), Expect = 2e-13 Identities = 105/123 (85%), Gaps = 2/123 (1%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtcttt 323 |||||||||||||| |||||||||| |||||| |||||||||||||||| ||||| ||| Sbjct: 522 gtatgaatggcatcttcaagctccaaatcttcattgtatcttttctcaaggaatgt-ttt 464 Query: 324 gcatttgaca-catttttccccatcgctgatgctttccaagagaagtaagatcctgatgg 382 | |||||| |||||| |||||||||| ||||||||||| || |||| ||| ||||| Sbjct: 463 cccattgacataattttttcccatcgctgttgctttccaagcaaaataagctccagatgg 404 Query: 383 atc 385 ||| Sbjct: 403 atc 401
>gb|DQ215380.1| Taeniopygia guttata clone 0058P0024D07 proteasome (prosome macropain) subunit alpha type 2-like mRNA, complete sequence Length = 1016 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgt 319 |||||||||||||| |||||||||| |||||| |||||||||||||||||||||| Sbjct: 570 gtatgaatggcatcttcaagctccaaatcttcattgtatcttttctcaagaaatgt 515 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 431 cagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagc 490 ||||||||||||||| || | ||||||||||| |||||| |||||||||| |||| ||| Sbjct: 403 cagtgatacaccaaagggacgaacaccaccagactgtgtgtactcctgcatcacagaagc 344 Query: 491 a 491 | Sbjct: 343 a 343
>gb|DQ215379.1| Taeniopygia guttata clone 0065P0013A07 proteasome (prosome macropain) subunit alpha type 2-like mRNA, complete sequence Length = 1030 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgt 319 |||||||||||||| |||||||||| |||||| |||||||||||||||||||||| Sbjct: 595 gtatgaatggcatcttcaagctccaaatcttcattgtatcttttctcaagaaatgt 540 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 431 cagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgcataacagcagc 490 ||||||||||||||| || | ||||||||||| |||||| |||||||||| |||| ||| Sbjct: 428 cagtgatacaccaaagggacgaacaccaccagactgtgtgtactcctgcatcacagaagc 369 Query: 491 a 491 | Sbjct: 368 a 368
>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete sequence Length = 181925 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 306 ttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaagag 365 ||||||||||| ||||||||||| || ||||| || ||||| || || |||||||| ||| Sbjct: 62901 ttctcaagaaacgtctttgcattcgaaacattctttcccattgcagaagctttccatgag 62842 Query: 366 aagtaagatcctgatggatcaacct 390 || ||||| || |||||||| |||| Sbjct: 62841 aaataagagccagatggatccacct 62817 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 252 gtcaaaattgcagtatgaatggcatcatcaagctccatatcttcggtgta 301 ||||| ||||| || ||||||||||||||||| ||||||||||| ||||| Sbjct: 63031 gtcaatattgccgtgtgaatggcatcatcaagttccatatcttctgtgta 62982
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 303 cttttctcaagaaatgtctttgcatttgacacatttttccccatcgctgatgctttccaa 362 ||||||||||| || || |||||||| || || || |||||||| ||||| |||||||| Sbjct: 79713 cttttctcaaggaaggtttttgcattagaaacgttcttccccatggctgaagctttccag 79654 Query: 363 gagaagtaagatcctgatggatcaacct 390 ||||| ||||| || |||||||| |||| Sbjct: 79653 gagaaataagagccagatggatccacct 79626 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 552 gcctgcttccgactttttctaacaagaacacgaaaatccggacccatcccact 604 ||||| |||| ||| || ||||||||||| |||||||| |||||||| ||||| Sbjct: 78787 gcctgtttcctactcttcctaacaagaactcgaaaatcaggacccatgccact 78735 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 386 aacctgatacaactgcggaccattgtcatcatacccagc 424 |||||||||||| || ||||| ||||||||||| ||||| Sbjct: 79347 aacctgatacaattgtggacccttgtcatcatatccagc 79309 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtca 630 ||||| |||||||||||||| ||||||| Sbjct: 78644 ctgtaaacaactccaatattaggagtca 78617
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 603 ctgtagacaactccaatatttggagtcagtgactgaatcttctgcac 649 ||||||||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 129890 ctgtagacaactccaatgttcggagtcaatgactgaatcttttgcac 129844
>gb|AY557762.1| Saccharomyces cerevisiae clone FLH111084.01X YML092C gene, complete cds Length = 753 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 420 ccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgt 469 ||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 413 ccagcaatcaacagtgaaacaccaaagggtctgacaccaccggactgtgt 364
>emb|Z46660.1|SC9725 S.cerevisiae chromosome XIII cosmid 9725 Length = 32148 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 420 ccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgt 469 ||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 12234 ccagcaatcaacagtgaaacaccaaagggtctgacaccaccggactgtgt 12283
>emb|X56731.1|SCPTSY7 Yeast gene for proteasome Y7 subunit Length = 1534 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 420 ccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgt 469 ||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 833 ccagcaatcaacagtgaaacaccaaagggtctgacaccaccggactgtgt 784
>ref|XM_528026.1| PREDICTED: Pan troglodytes similar to Proteasome subunit alpha type 2 (Proteasome component C3) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) (LOC472653), mRNA Length = 774 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 638 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 580
>gb|AY626818.1| Gekko japonicus BS008P (BS008) mRNA, complete cds Length = 920 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 ||||||||||| ||||| |||| |||||| |||||||||||||||| Sbjct: 601 tgaatggcatcttcaagttccagatcttcattgtatcttttctcaag 555
>gb|AY641844.1| Gekko japonicus GekBS023P mRNA, complete cds Length = 876 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 ||||||||||| ||||| |||| |||||| |||||||||||||||| Sbjct: 550 tgaatggcatcttcaagttccagatcttcattgtatcttttctcaag 504
>ref|NM_002787.3| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 2 (PSMA2), mRNA Length = 1477 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 617 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 559
>gb|BC002900.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 2, mRNA (cDNA clone IMAGE:3942625), partial cds Length = 858 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 543 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 485
>gb|BC047697.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 2, mRNA (cDNA clone MGC:51935 IMAGE:5786518), complete cds Length = 1431 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 571 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 513
>emb|CR623578.1| full-length cDNA clone CS0DI044YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1453 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 625 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 567
>emb|CR620562.1| full-length cDNA clone CS0DB002YG16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1382 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 568 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 510
>emb|CR607875.1| full-length cDNA clone CS0DD001YP15 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 506 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 226 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 168
>emb|CR608618.1| full-length cDNA clone CS0DB008YE23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 848 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 570 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 512
>emb|CR606611.1| full-length cDNA clone CS0DC003YB07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1392 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 570 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 512
>emb|CR598541.1| full-length cDNA clone CS0DN003YB03 of Adult brain of Homo sapiens (human) Length = 1384 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 570 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 512
>emb|CR597674.1| full-length cDNA clone CS0DA008YE24 of Neuroblastoma of Homo sapiens (human) Length = 1408 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 579 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 521
>emb|CR590217.1| full-length cDNA clone CS0DD003YD09 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 868 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 570 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 512
>emb|CR450317.1| Homo sapiens full open reading frame cDNA clone RZPDo834F121D for gene PSMA2, proteasome (prosome, macropain) subunit, alpha type, 2; complete cds; without stopcodon Length = 702 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 569 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 511
>dbj|AK222976.1| Homo sapiens mRNA for proteasome alpha 2 subunit variant, clone: HSI02954 Length = 820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 585 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 527
>dbj|D00760.1|HUMPSC3 Homo sapiens mRNA for proteasome subunit C3, complete cds Length = 866 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 |||||||||||||| ||||| |||| |||||| | |||||||||||||| || ||||| Sbjct: 569 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaaggaaagtctt 511
>ref|XM_588815.2| PREDICTED: Bos taurus similar to Proteasome subunit alpha type 2 (Proteasome component C3) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) (LOC511472), mRNA Length = 705 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | |||||||||||||| Sbjct: 569 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaag 520
>emb|CR858968.1| Pongo pygmaeus mRNA; cDNA DKFZp469J0823 (from clone DKFZp469J0823) Length = 2435 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | |||||||||||||| Sbjct: 587 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaag 538
>gb|BC102206.1| Bos taurus proteasome (prosome, macropain) subunit, alpha type, 2, mRNA (cDNA clone MGC:127174 IMAGE:7945466), complete cds Length = 1456 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | |||||||||||||| Sbjct: 593 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaag 544
>gb|AC079354.4| Homo sapiens BAC clone RP11-1145F21 from 2, complete sequence Length = 162554 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | |||||||||||||| Sbjct: 79149 gtatgaatggcatcttcaagttccagatcttcattttatcttttctcaag 79100
>ref|NM_001034662.1| Bos taurus proteasome (prosome, macropain) subunit, alpha type, 2 (PSMA2), mRNA Length = 1456 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | |||||||||||||| Sbjct: 593 gtatgaatggcatcttcaagttccagatcttcattatatcttttctcaag 544
>ref|XM_629843.1| Dictyostelium discoideum hypothetical protein (DDB0184241), partial mRNA Length = 699 Score = 50.1 bits (25), Expect = 0.009 Identities = 103/129 (79%) Strand = Plus / Minus Query: 353 tgctttccaagagaagtaagatcctgatggatcaacctgatacaactgcggaccattgtc 412 ||||||||||| ||| ||||| || ||||||||||| ||||| || || ||||| || || Sbjct: 474 tgctttccaagcgaaataagaaccagatggatcaacttgatataaatgtggacctttttc 415 Query: 413 atcatacccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaa 472 ||| | ||||| | || | || ||||||||||| | |||||||||||||| ||||| Sbjct: 414 atcgaaaccagctactaataaagacacaccaaatggacgaacaccaccagattgagtgaa 355 Query: 473 ctcctgcat 481 || ||||| Sbjct: 354 ttcttgcat 346
>emb|AJ721019.1| Gallus gallus mRNA for hypothetical protein, clone 32j6 Length = 3108 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatct 304 |||||||||||||| |||||||||| |||||| ||||||| Sbjct: 2664 gtatgaatggcatcttcaagctccaaatcttcattgtatct 2624 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 atttttccccatcgctgatgctttccaag 363 |||||| |||||||||| ||||||||||| Sbjct: 2154 attttttcccatcgctgttgctttccaag 2126
>ref|NM_001012860.1| Gallus gallus proteasome (prosome, macropain) subunit, alpha type, 2 (PSMA2), mRNA Length = 3108 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatct 304 |||||||||||||| |||||||||| |||||| ||||||| Sbjct: 2664 gtatgaatggcatcttcaagctccaaatcttcattgtatct 2624 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 335 atttttccccatcgctgatgctttccaag 363 |||||| |||||||||| ||||||||||| Sbjct: 2154 attttttcccatcgctgttgctttccaag 2126
>ref|XM_806412.1| Trypanosoma cruzi strain CL Brener proteasome alpha 2 subunit (Tc00.1047053504069.10) partial mRNA Length = 696 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 441 ccaaatggtcttacaccaccagattgtgtgaactc 475 ||||| ||||| |||||||||||||| |||||||| Sbjct: 386 ccaaaaggtctaacaccaccagattgcgtgaactc 352
>ref|XM_797293.1| Trypanosoma cruzi strain CL Brener proteasome alpha 2 subunit (Tc00.1047053416883.18) partial mRNA Length = 540 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 441 ccaaatggtcttacaccaccagattgtgtgaactc 475 ||||| ||||| |||||||||||||| |||||||| Sbjct: 230 ccaaaaggtctaacaccaccagattgcgtgaactc 196
>dbj|AB240540.1| Paralichthys olivaceus mRNA for proteasome alpha 2, partial cds Length = 683 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 420 ccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgtgaactcctgc 479 ||||| |||| || |||||| |||| ||| | ||||||||||| |||||| |||||||| Sbjct: 391 ccagctatcagcaatgatacgccaagtggacgcacaccaccagactgtgtgtactcctgc 332 Query: 480 ataacag 486 || |||| Sbjct: 331 attacag 325
>gb|AC007808.5| Drosophila melanogaster clone BACR18C01, complete sequence Length = 167195 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 ctccacctcctccaagaaatcc 149 |||||||||||||||||||||| Sbjct: 139339 ctccacctcctccaagaaatcc 139318
>gb|BC072254.1| Xenopus laevis proteasome subunit XC3, mRNA (cDNA clone MGC:82351 IMAGE:4202348), complete cds Length = 904 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Minus Query: 441 ccaaatggtcttacaccaccagattgtgtgaactcctgcataacag 486 |||||||| | |||||||||||||||||| | |||||||| |||| Sbjct: 414 ccaaatggacgtacaccaccagattgtgtatattcctgcatgacag 369
>gb|AC098867.3| Homo sapiens BAC clone RP11-493C20 from 4, complete sequence Length = 142314 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 ggtgtatcttttctcaagaaatgtct 321 |||||||||| ||||||||||||||| Sbjct: 84477 ggtgtatcttctctcaagaaatgtct 84452
>gb|AY772478.1| Chaenocephalus aceratus bloodthirsty (bty) mRNA, complete cds Length = 2388 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccttcatatccttctttcagag 252 |||||||||||||||||||||| Sbjct: 659 ccttcatatccttctttcagag 638
>gb|AY454308.1| Notothenia coriiceps bloodthirsty (bty) mRNA, complete cds Length = 2139 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccttcatatccttctttcagag 252 |||||||||||||||||||||| Sbjct: 670 ccttcatatccttctttcagag 649
>dbj|AB169111.1| Macaca fascicularis testis cDNA, clone: QtsA-17293, similar to human proteasome (prosome, macropain) subunit, alpha type, 2(PSMA2), mRNA, RefSeq: NM_002787.3 Length = 1614 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttcggtgtatcttttctcaag 313 |||||||||||||| ||||| |||| |||||| | || ||||||||||| Sbjct: 592 gtatgaatggcatcttcaagttccagatcttcattataccttttctcaag 543
>gb|S51111.1| proteasome subunit XC3 [Xenopus laevis, mRNA, 890 nt] Length = 890 Score = 44.1 bits (22), Expect = 0.58 Identities = 40/46 (86%) Strand = Plus / Minus Query: 441 ccaaatggtcttacaccaccagattgtgtgaactcctgcataacag 486 |||||||| | |||||||||||||||||| | |||||||| |||| Sbjct: 398 ccaaatggacgtacaccaccagattgtgtatattcctgcatgacag 353
>gb|AE003706.5| Drosophila melanogaster chromosome 3R, section 44 of 118 of the complete sequence Length = 270961 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 ctccacctcctccaagaaatcc 149 |||||||||||||||||||||| Sbjct: 112640 ctccacctcctccaagaaatcc 112619
>ref|XM_633366.1| Dictyostelium discoideum hypothetical protein (DDB0218629), partial mRNA Length = 5775 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 427 tcaacagtgatacaccaaatggtct 451 |||||| |||||||||||||||||| Sbjct: 1639 tcaacactgatacaccaaatggtct 1615
>ref|NM_001001488.3| Mus musculus ATPase, class I, type 8B, member 1 (Atp8b1), mRNA Length = 6440 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 2767 ccaagagaagtaagatcctga 2787
>gb|AY506548.1| Mus musculus ATPase class I type 8B member 1 (Atp8b1) mRNA, complete cds Length = 4058 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 2496 ccaagagaagtaagatcctga 2516
>gb|AF395823.1| Mus musculus aminophospholipid translocase (Fic1) mRNA, partial cds Length = 311 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 200 ccaagagaagtaagatcctga 220
>ref|XM_948365.1| Theileria annulata strain Ankara proteasome subunit (TA11350) partial mRNA Length = 765 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 437 tacaccaaatggtcttacaccaccagattgtgt 469 ||||||||||||||||| |||||| ||||||| Sbjct: 396 tacaccaaatggtcttaatccaccaaattgtgt 364
>ref|XM_660157.1| Cryptosporidium hominis TU502 proteasome subunit (Chro.40039) partial mRNA Length = 786 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 413 atcatacccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgt 469 |||||| ||||||| || | |||||||||||||||||| | |||||| ||||||| Sbjct: 420 atcatatccagcaaataaaaatgatacaccaaatggtctcaatccaccaaattgtgt 364
>emb|AL110295.2|SPBC106 S.pombe chromosome II cosmid c106 Length = 42544 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccaccagattg 466 |||||||| |||| ||||||||||||||| Sbjct: 34301 acaccaaaaggtcgtacaccaccagattg 34273
>gb|AC093571.13| Pan troglodytes clone rp43-118h18, complete sequence Length = 164807 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 tatgttgaactggccaataaa 52 ||||||||||||||||||||| Sbjct: 157618 tatgttgaactggccaataaa 157638
>dbj|AK157316.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830210O18 product:Potential phospholipid-transporting ATPase IC (EC 3.6.3.1) (Familial intrahepatic cholestasis type 1) (ATPase class I type 8B member 1) homolog [Homo sapiens], full insert sequence Length = 6705 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 3035 ccaagagaagtaagatcctga 3055
>ref|XM_625633.1| Cryptosporidium parvum Iowa II proteasome subunit alpha type 4, NTN hydrolase fold (cgd4_250), partial mRNA Length = 816 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 413 atcatacccagcaatcaacagtgatacaccaaatggtcttacaccaccagattgtgt 469 |||||| ||||||| || | |||||||||||||||||| | |||||| ||||||| Sbjct: 450 atcatatccagcaaataaaaatgatacaccaaatggtctcaatccaccaaattgtgt 394
>ref|NM_001021074.1| Schizosaccharomyces pombe 972h- 20S proteasome subunit alpha 4 (SPBC106.16), partial mRNA Length = 780 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccaccagattg 466 |||||||| |||| ||||||||||||||| Sbjct: 389 acaccaaaaggtcgtacaccaccagattg 361
>ref|XM_214553.3| PREDICTED: Rattus norvegicus ATPase, Class I, type 8B, member 1 (predicted) (Atp8b1_predicted), mRNA Length = 4245 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 2687 ccaagagaagtaagatcctga 2707
>gb|AC102268.11| Mus musculus chromosome 18, clone RP24-248J13, complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ccaagagaagtaagatcctga 379 ||||||||||||||||||||| Sbjct: 82832 ccaagagaagtaagatcctga 82812
>emb|AL807387.10| Mouse DNA sequence from clone RP23-24J10 on chromosome 4, complete sequence Length = 241148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 aattgcagtatgaatggcatc 277 ||||||||||||||||||||| Sbjct: 193512 aattgcagtatgaatggcatc 193532
>dbj|AB013342.1| Carassius auratus mRNA for proteasome alpha 2 subunit, complete cds Length = 838 Score = 42.1 bits (21), Expect = 2.3 Identities = 81/101 (80%) Strand = Plus / Minus Query: 228 tgaccttcatatccttctttcagagtcaaaattgcagtatgaatggcatcatcaagctcc 287 ||||||||| | | ||| |||| ||| || || ||||| || || ||||| ||||| ||| Sbjct: 618 tgaccttcaaaactttccttcaaagttaagatggcagtgtgtatagcatcttcaagttcc 559 Query: 288 atatcttcggtgtatcttttctcaagaaatgtctttgcatt 328 | |||||| | |||||||| ||||||||||| ||| |||| Sbjct: 558 agatcttcattatatcttttttcaagaaatgtttttccatt 518
>dbj|AP000359.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB63E7 Length = 101507 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 tatgttgaactggccaataaa 52 ||||||||||||||||||||| Sbjct: 50379 tatgttgaactggccaataaa 50359
>gb|AY674402.1| Penicillium atramentosum strain CBS 29148 beta tubulin gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ccgaaactttttcttgttgg 99 |||||||||||||||||||| Sbjct: 44 ccgaaactttttcttgttgg 63
>ref|XM_519775.1| PREDICTED: Pan troglodytes similar to neutral sphingomyelinase (N-SMase) activation associated factor (LOC464193), mRNA Length = 2080 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 actatgttgaactggccaat 49 |||||||||||||||||||| Sbjct: 1528 actatgttgaactggccaat 1509
>gb|AC102614.11| Mus musculus chromosome 8, clone RP23-421L10, complete sequence Length = 197194 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 620 atttggagtcagtgactgaatctt 643 ||||||||||||||||| |||||| Sbjct: 55798 atttggagtcagtgacttaatctt 55775
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 619 tatttggagtcagtgactgaatcttctg 646 ||||||||| |||||||||||| ||||| Sbjct: 54542 tatttggagacagtgactgaatgttctg 54515
>gb|AC150515.3| Bos taurus BAC CH240-118E9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171213 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gaactggccaataaaaacat 57 |||||||||||||||||||| Sbjct: 77575 gaactggccaataaaaacat 77556
>gb|AC101983.16| Mus musculus chromosome 6, clone RP24-352A8, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 aagatcctgatggatcaacctgat 393 |||||||||||||| ||||||||| Sbjct: 71555 aagatcctgatggaacaacctgat 71578
>gb|AF531416.1| Solanum tuberosum PEPC kinase 1b (PPCK1b) gene, complete cds Length = 3165 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 aactccaatatttggagtca 630 |||||||||||||||||||| Sbjct: 330 aactccaatatttggagtca 311
>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 619 tatttggagtcagtgactgaatcttctg 646 ||||||||| |||||||||||| ||||| Sbjct: 41877 tatttggagacagtgactgaatgttctg 41850
>gb|AC163608.2| Mus musculus chromosome 1, clone RP24-185M14, complete sequence Length = 161555 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 catatccttctttcagagtcaaaa 258 ||||||||| |||||||||||||| Sbjct: 27991 catatccttgtttcagagtcaaaa 27968
>ref|XM_533078.2| PREDICTED: Canis familiaris similar to Proteasome subunit alpha type 2 (Proteasome component C3) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3), transcript variant 1 (LOC475870), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 9.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 267 tgaatggcatcatcaagctccatatcttcggtgtatcttttctcaagaaatgtctt 322 ||||||||||| ||||| |||| ||||| | |||||||||||||| || ||||| Sbjct: 609 tgaatggcatcttcaagttccaggtcttcattatatcttttctcaaggaaagtctt 554
>gb|AC101994.3| Mus musculus chromosome 1, clone RP24-406F14, complete sequence Length = 164170 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 catatccttctttcagagtcaaaa 258 ||||||||| |||||||||||||| Sbjct: 65006 catatccttgtttcagagtcaaaa 64983
>gb|AC162282.6| Mus musculus chromosome 8, clone RP23-154H18, complete sequence Length = 217566 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 620 atttggagtcagtgactgaatctt 643 ||||||||||||||||| |||||| Sbjct: 212686 atttggagtcagtgacttaatctt 212663
>emb|AL160276.21| Human DNA sequence from clone RP11-40A7 on chromosome 9 Contains the 3' end of the GRF2 gene for guanine nucleotide-releasing factor 2 (specific for crk proto-oncogene) and two CpG islands, complete sequence Length = 144156 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccttcatatccttctttcag 250 |||||||||||||||||||| Sbjct: 66032 ccttcatatccttctttcag 66051
>emb|BX065763.1|CNS09MWN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC49DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 916 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 ccaatttcaatgttgttggcagag 224 ||||||||||||| |||||||||| Sbjct: 687 ccaatttcaatgtagttggcagag 710
>emb|BX065762.1|CNS09MWM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1059 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 ccaatttcaatgttgttggcagag 224 ||||||||||||| |||||||||| Sbjct: 659 ccaatttcaatgtagttggcagag 636
>gb|AC158566.8| Mus musculus chromosome 8, clone RP24-149I12, complete sequence Length = 156342 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 620 atttggagtcagtgactgaatctt 643 ||||||||||||||||| |||||| Sbjct: 149342 atttggagtcagtgacttaatctt 149319
>gb|AC166081.3| Mus musculus 10 BAC RP24-184F11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161394 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 622 ttggagtcagtgactgaatc 641 |||||||||||||||||||| Sbjct: 136823 ttggagtcagtgactgaatc 136804
>gb|AC155291.3| Mus musculus BAC clone RP24-439M20 from chromosome 12, complete sequence Length = 185156 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ctttgcatttgacacatttt 339 |||||||||||||||||||| Sbjct: 64909 ctttgcatttgacacatttt 64928
>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160370 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 131 cacctcctccaagaaatccttgatctct 158 ||||||||||| ||||||||||||||| Sbjct: 30861 cacctcctccagaaaatccttgatctct 30888
>gb|AC160534.5| Mus musculus chromosome 7, clone RP24-265E12, complete sequence Length = 176921 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 tatccttctttcagagtcaaaatt 260 ||||||| |||||||||||||||| Sbjct: 147264 tatccttttttcagagtcaaaatt 147241
>gb|AY265099.1| HIV-1 isolate 98CM1437 from Cameroon nef protein (nef) gene, complete cds Length = 621 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 caagaaatccttgatctctg 159 |||||||||||||||||||| Sbjct: 322 caagaaatccttgatctctg 341
>ref|NM_001023311.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC1442.06), partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 453 acaccaccagattgtgtgaactcctgcataac 484 ||||||||||||||||| |||| |||||||| Sbjct: 380 acaccaccagattgtgtagactcttgcataac 349
>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence Length = 187811 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tatccttctttcagagtcaaaatt 260 ||||||| |||||||||||||||| Sbjct: 2809 tatccttttttcagagtcaaaatt 2832
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 atttgacacatttttccccatcgc 349 |||||||||||||||| ||||||| Sbjct: 64037 atttgacacatttttcaccatcgc 64014
>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216621 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 622 ttggagtcagtgactgaatc 641 |||||||||||||||||||| Sbjct: 195307 ttggagtcagtgactgaatc 195326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 619 tatttggagtcagtgactgaatcttctg 646 ||||||||| |||||||||||| ||||| Sbjct: 28626750 tatttggagacagtgactgaatgttctg 28626723
>gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, region 87D-87D, BAC clone BACR09O13, complete sequence Length = 174677 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tttgcatttgacacattttt 340 |||||||||||||||||||| Sbjct: 69797 tttgcatttgacacattttt 69816
>gb|AY588971.1| HIV-1 isolate CU29 from Cuba, complete genome Length = 9098 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 caagaaatccttgatctctg 159 |||||||||||||||||||| Sbjct: 8743 caagaaatccttgatctctg 8762
>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226168 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 622 ttggagtcagtgactgaatc 641 |||||||||||||||||||| Sbjct: 198180 ttggagtcagtgactgaatc 198199
>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence Length = 166680 Score = 40.1 bits (20), Expect = 9.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 264 gtatgaatggcatcatcaagctccatatcttc 295 |||||||||||||| ||||| |||| |||||| Sbjct: 49892 gtatgaatggcatcttcaagttccagatcttc 49861
>gb|AC102544.14| Mus musculus chromosome 8, clone RP23-118B13, complete sequence Length = 224946 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 620 atttggagtcagtgactgaatctt 643 ||||||||||||||||| |||||| Sbjct: 156174 atttggagtcagtgacttaatctt 156197
>gb|AE004971.1| Halobacterium sp. NRC-1 section 2 of 170 of the complete genome Length = 10307 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gggtcaccgggatggtttcc 527 |||||||||||||||||||| Sbjct: 3498 gggtcaccgggatggtttcc 3479
>gb|AE005169.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 30 of 32 of the complete genome Length = 11393 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gggtcaccgggatggtttcc 527 |||||||||||||||||||| Sbjct: 6624 gggtcaccgggatggtttcc 6643
>gb|AE005145.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 6 of 32 of the complete genome Length = 10903 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gggtcaccgggatggtttcc 527 |||||||||||||||||||| Sbjct: 7716 gggtcaccgggatggtttcc 7697
>emb|Z72920.1|SCYGR135W S.cerevisiae chromosome VII reading frame ORF YGR135w Length = 1289 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccacca 461 |||||||||||||||| ||||||| Sbjct: 651 acaccaaatggtcttaaaccacca 628
>emb|X56730.1|SCPTSY13 Yeast gene for proteasome Y13 subunit Length = 1560 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccacca 461 |||||||||||||||| ||||||| Sbjct: 770 acaccaaatggtcttaaaccacca 747
>gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35 of 118 of the complete sequence Length = 221239 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tttgcatttgacacattttt 340 |||||||||||||||||||| Sbjct: 81486 tttgcatttgacacattttt 81505
>gb|DQ332145.1| Synthetic construct Saccharomyces cerevisiae clone FLH201164.01X PRE9 gene, complete sequence Length = 777 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccacca 461 |||||||||||||||| ||||||| Sbjct: 398 acaccaaatggtcttaaaccacca 375
>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete sequence Length = 211680 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgaactggccaataaaaaca 56 |||||||||||||||||||| Sbjct: 148315 tgaactggccaataaaaaca 148296
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gggtcaccgggatggtttcc 527 |||||||||||||||||||| Sbjct: 160165 gggtcaccgggatggtttcc 160184 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gggtcaccgggatggtttcc 527 |||||||||||||||||||| Sbjct: 63224 gggtcaccgggatggtttcc 63205
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aatgttgttggcagagattt 228 |||||||||||||||||||| Sbjct: 21869 aatgttgttggcagagattt 21850
>gb|M63851.1|YSCPROTY13 S.cerevisiae proteasome Y13 gene, complete cds Length = 1560 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 acaccaaatggtcttacaccacca 461 |||||||||||||||| ||||||| Sbjct: 770 acaccaaatggtcttaaaccacca 747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,706,721 Number of Sequences: 3902068 Number of extensions: 6706721 Number of successful extensions: 123572 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123127 Number of HSP's gapped (non-prelim): 438 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
