ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19j19 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 97.1 bits (240), Expect = 3e-20 Identities = 46/76 (60%), Positives = 58/76 (76%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E STNEN +TVG + +DP T+VKAR+NN GK +ALLQHE +PKSL T+SGE DTK Sbjct: 200 EVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTK 259 Query: 350 ALDRAPKFGLSLVLKP 303 ++D+ KFGL+L LKP Sbjct: 260 SVDKGAKFGLALALKP 275
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 93.2 bits (230), Expect = 4e-19 Identities = 44/76 (57%), Positives = 58/76 (76%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E T S+NEN+LT G +T+DP T VKAR NN+GK +ALLQHE +PKS+ TIS E DTK Sbjct: 198 ELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTK 257 Query: 350 ALDRAPKFGLSLVLKP 303 A+D++ K G+++ LKP Sbjct: 258 AIDKSSKVGIAVALKP 273
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 93.2 bits (230), Expect = 4e-19 Identities = 43/76 (56%), Positives = 59/76 (77%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E T S+NENTLT+G + +DP T VKAR+N+ GK +AL+QHE +PKSL TISGE DT+ Sbjct: 200 ELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTR 259 Query: 350 ALDRAPKFGLSLVLKP 303 A++++ K GL++ LKP Sbjct: 260 AIEKSAKIGLAVALKP 275
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 92.8 bits (229), Expect = 5e-19 Identities = 43/76 (56%), Positives = 58/76 (76%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E T S+NEN+LT G +T+DP T VKAR+NN+GK +AL+QHE PKSL TIS E DTK Sbjct: 200 ELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTK 259 Query: 350 ALDRAPKFGLSLVLKP 303 A++++ K G+++ LKP Sbjct: 260 AIEKSSKVGIAIALKP 275
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 89.7 bits (221), Expect = 4e-18 Identities = 41/76 (53%), Positives = 57/76 (75%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 + + + ST ENT T+G + +DP T VK R+ N+GK +AL+QHE +PKSL+TIS E DTK Sbjct: 200 DISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTK 259 Query: 350 ALDRAPKFGLSLVLKP 303 A++++ K GLSL LKP Sbjct: 260 AIEKSAKIGLSLALKP 275
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 89.7 bits (221), Expect = 4e-18 Identities = 42/76 (55%), Positives = 60/76 (78%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E + KLS+ ++T+TVG +++DP T+VKAR+N+ G +AL+QHE KPKS TISGE DTK Sbjct: 200 EVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTK 259 Query: 350 ALDRAPKFGLSLVLKP 303 ++D++ K GL+L LKP Sbjct: 260 SIDKSAKVGLALALKP 275
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 85.9 bits (211), Expect = 6e-17 Identities = 39/76 (51%), Positives = 54/76 (71%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E + +T EN +TVG + +DP T VKAR+NN G AL+QHE +PKS T+SGE D+K Sbjct: 198 EISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSK 257 Query: 350 ALDRAPKFGLSLVLKP 303 A+D++ K G++L LKP Sbjct: 258 AIDKSAKVGIALALKP 273
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 84.7 bits (208), Expect = 1e-16 Identities = 39/75 (52%), Positives = 55/75 (73%) Frame = -2 Query: 530 EFTRKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTK 351 E + +S NE+TL G +++DP T +K R NN G +AL+QHE +PKS +TISG+ DTK Sbjct: 202 ELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTK 261 Query: 350 ALDRAPKFGLSLVLK 306 A++++ K GLSLVLK Sbjct: 262 AIEKSTKVGLSLVLK 276
>SPTN2_HUMAN (O15020) Spectrin beta chain, brain 2 (Spectrin, non-erythroid beta| chain 2) (Beta-III spectrin) Length = 2390 Score = 38.5 bits (88), Expect = 0.012 Identities = 34/130 (26%), Positives = 52/130 (40%) Frame = +2 Query: 86 RKKQAAYIYE*SSKVNDWIKSQVKAYRILPTEHLNLQRFNRTCLRNKLLAIASQKITKES 265 R QAA +Y+ + ND V A R++ + L F+ A+A Q E Sbjct: 742 RLAQAASLYQFQADANDMEAWLVDALRLVSSPELGHDEFSTQ-------ALARQHRALEE 794 Query: 266 DVQPPSSTYDLIRA*AQVTAQTWVLCPRPWCRIHRISSRVTLV*PRAGEGQQAFQCC*AL 445 +++ T D +R A T P R+ + + RAGE +A + AL Sbjct: 795 EIRSHRPTLDALREQAAALPPTLSRTPEVQGRVPTLERHYEELQARAGERARALEAALAL 854 Query: 446 PSQLSEGRQC 475 + LSE C Sbjct: 855 YTMLSEAGAC 864
>VDAC2_RABIT (P68003) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin 2) Length = 294 Score = 34.3 bits (77), Expect = 0.22 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 TN + Y +DP ++ A++NN+ + ++P LT+S D K+++ Sbjct: 225 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGH 284 Query: 332 KFGLSLVLK 306 K GL+L L+ Sbjct: 285 KLGLALELE 293
>VDAC2_PIG (Q9MZ15) Voltage-dependent anion-selective channel protein 2| Length = 294 Score = 34.3 bits (77), Expect = 0.22 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 TN + Y +DP ++ A++NN+ + ++P LT+S D K+++ Sbjct: 225 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGH 284 Query: 332 KFGLSLVLK 306 K GL+L L+ Sbjct: 285 KLGLALELE 293
>VDAC2_BOVIN (P68002) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin 2) Length = 294 Score = 34.3 bits (77), Expect = 0.22 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 TN + Y +DP ++ A++NN+ + ++P LT+S D K+++ Sbjct: 225 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGH 284 Query: 332 KFGLSLVLK 306 K GL+L L+ Sbjct: 285 KLGLALELE 293
>SPTN2_RAT (Q9QWN8) Spectrin beta chain, brain 2 (Spectrin, non-erythroid beta| chain 2) (Beta-III spectrin) (SPNB-3) (Beta SpIII sigma 1) (Spectrin-like protein GTRAP41) Length = 2388 Score = 33.9 bits (76), Expect = 0.29 Identities = 31/130 (23%), Positives = 50/130 (38%) Frame = +2 Query: 86 RKKQAAYIYE*SSKVNDWIKSQVKAYRILPTEHLNLQRFNRTCLRNKLLAIASQKITKES 265 R QAA +Y+ + ND V A R++ + + F+ A+A Q E Sbjct: 742 RLAQAASLYQFQADANDMEAWLVDALRLVSSPEVGHDEFSTQ-------ALARQHRALEE 794 Query: 266 DVQPPSSTYDLIRA*AQVTAQTWVLCPRPWCRIHRISSRVTLV*PRAGEGQQAFQCC*AL 445 +++ T D +R A P R+ + + RAGE +A + A Sbjct: 795 EIRAHRPTLDALREQAAALPPALSHTPEVQGRVPTLEQHYEELQARAGERARALEAALAF 854 Query: 446 PSQLSEGRQC 475 + LSE C Sbjct: 855 YTMLSEAGAC 864
>VDAC2_RAT (P81155) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) (B36-VDAC) Length = 295 Score = 33.5 bits (75), Expect = 0.37 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 TN + Y +DP ++ A++NN+ + ++P LT+S D K+ + Sbjct: 226 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGH 285 Query: 332 KFGLSLVLK 306 K GL+L L+ Sbjct: 286 KLGLALELE 294
>VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane protein porin 2) Length = 295 Score = 33.5 bits (75), Expect = 0.37 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 TN + Y +DP ++ A++NN+ + ++P LT+S D K+ + Sbjct: 226 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGH 285 Query: 332 KFGLSLVLK 306 K GL+L L+ Sbjct: 286 KLGLALELE 294
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 33.1 bits (74), Expect = 0.49 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 512 STNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-A 336 + N TL + Y +D T VK ++N+ G V+P + + + DT+ L + A Sbjct: 212 TANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTVGLGLQLDTQRLGQPA 271 Query: 335 PKFGLSL 315 K GLSL Sbjct: 272 HKAGLSL 278
>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin| Length = 283 Score = 33.1 bits (74), Expect = 0.49 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -2 Query: 494 LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDRAP-KFGLS 318 L V Y +DP + VK ++N+ G A ++ L + FDT+ LD+A K G S Sbjct: 219 LEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLREGVTLGVGASFDTQKLDQATHKVGTS 278 Query: 317 LVLK 306 + Sbjct: 279 FTFE 282
>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y VDP A++NN+ + +KP LT+S D K ++ Sbjct: 227 NSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 286 Query: 332 KFGLSL 315 K GL L Sbjct: 287 KLGLGL 292
>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y VDP A++NN+ + +KP LT+S D K ++ Sbjct: 213 NSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 272 Query: 332 KFGLSL 315 K GL L Sbjct: 273 KLGLGL 278
>VDAC2_HUMAN (P45880) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (hVDAC2) (Outer mitochondrial membrane protein porin 2) Length = 347 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = -2 Query: 509 TNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALD 342 TN + Y +DP ++ A++NN+ + ++P LT+S D K+++ Sbjct: 240 TNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSIN 295
>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 282 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y +DP A++NN+ + +KP LT+S D K ++ Sbjct: 213 NSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 272 Query: 332 KFGLSL 315 K GL L Sbjct: 273 KLGLGL 278
>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1| (VDAC-1) Length = 282 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y +DP A++NN+ + +KP LT+S D K ++ Sbjct: 213 NSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 272 Query: 332 KFGLSL 315 K GL L Sbjct: 273 KLGLGL 278
>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 282 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y +DP A++NN+ + +KP LT+S D K ++ Sbjct: 213 NSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 272 Query: 332 KFGLSL 315 K GL L Sbjct: 273 KLGLGL 278
>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1| (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 282 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 506 NENT-LTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISGEFDTKALDR-AP 333 N NT + Y +DP A++NN+ + +KP LT+S D K ++ Sbjct: 213 NSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGH 272 Query: 332 KFGLSL 315 K GL L Sbjct: 273 KLGLGL 278
>FTHS_HAEDU (Q7VLW6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 556 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -2 Query: 476 YTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISG 366 YT D Q LN G +AALL+ +KP + T++G Sbjct: 225 YTKDKQPVYAKDLNAQGAMAALLKDAIKPNLVQTMAG 261
>HCYA_OCTDO (P12659) Hemocyanin A-type, units Ode to Odg (Fragment)| Length = 1233 Score = 30.4 bits (67), Expect = 3.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 Query: 3 GKXXTPHEK*M*LLQVTDYCDSYSELTVERNKLHTSMNDHQK 128 G+ T +++ + +L+ DYCD + V N +H + HQK Sbjct: 570 GEGSTLYQQVLLMLEQEDYCDFEVQFEVVHNSIHYLVGGHQK 611
>HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg| Length = 2896 Score = 30.4 bits (67), Expect = 3.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 Query: 3 GKXXTPHEK*M*LLQVTDYCDSYSELTVERNKLHTSMNDHQK 128 G+ T +++ + +L+ DYCD + V N +H + HQK Sbjct: 2233 GEGSTLYQQVLLMLEQEDYCDFEVQFEVVHNSIHYLVGGHQK 2274
>FTHS_BACLD (Q65IA6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 559 Score = 30.4 bits (67), Expect = 3.2 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -2 Query: 476 YTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISG 366 YTVD Q L G LA LL+ +KP + T+ G Sbjct: 229 YTVDGQPVTAGMLGVQGALALLLKDAIKPNLVQTVEG 265
>RMLA_XANCP (P55256) Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)| (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) Length = 295 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -2 Query: 521 RKLSTNENTLTVGGLYTVDPQTAVKARLNNTGKLAALLQHEVKPKSLLTISG--EFDTKA 348 R+ E TV G + DP+ A + GK+ + + KP+S ++G +D KA Sbjct: 124 RRADAREQGATVFGYWVNDPERYGVAEFDQHGKVIDIAEKPEKPRSNYAVTGLYFYDGKA 183 Query: 347 LDRA 336 D A Sbjct: 184 SDYA 187
>TREA_SHIFL (Q83RP6) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 565 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 522 PEALNKREHTDSWWPVHCRPSDSCEGKAQQHWKACCPSP 406 PE + REH D WPV R +++ E W + P P Sbjct: 110 PEGQSLREHIDGLWPVLTRSTENTE-----KWDSLLPLP 143
>TREA_ECOLI (P13482) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 565 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 522 PEALNKREHTDSWWPVHCRPSDSCEGKAQQHWKACCPSP 406 PE + REH D WPV R +++ E W + P P Sbjct: 110 PEGQSLREHIDGLWPVLTRSTENTE-----KWDSLLPLP 143
>TREA_ECOL6 (Q8CW46) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 565 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 522 PEALNKREHTDSWWPVHCRPSDSCEGKAQQHWKACCPSP 406 PE + REH D WPV R +++ E W + P P Sbjct: 110 PEGQSLREHIDGLWPVLTRSTENTE-----KWDSLLPLP 143
>TREA_ECO57 (Q8XDH7) Periplasmic trehalase precursor (EC 3.2.1.28)| (Alpha,alpha-trehalase) (Alpha,alpha-trehalose glucohydrolase) Length = 561 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -1 Query: 522 PEALNKREHTDSWWPVHCRPSDSCEGKAQQHWKACCPSP 406 PE + REH D WPV R +++ E W + P P Sbjct: 106 PEGQSLREHIDGLWPVLTRSTENTE-----KWDSLLPLP 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,730,600 Number of Sequences: 219361 Number of extensions: 1624555 Number of successful extensions: 3915 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3913 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
