ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19j18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AE012148.1| Xanthomonas campestris pv. campestris str. ATCC 3... 48 0.036
2gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 48 0.036
3emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 ... 42 2.2
4emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in l... 42 2.2
5gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B... 42 2.2
6emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in ... 42 2.2
7gb|BC101717.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
8gb|BC107734.1| Homo sapiens cDNA clone IMAGE:4770567, partial cds 40 8.8
9ref|NM_184732.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
10ref|XM_527549.1| PREDICTED: Pan troglodytes similar to Sorting n... 40 8.8
11gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
12gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.8
13gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
14gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
15gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
16gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, com... 40 8.8
17gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
18gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
19gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
20gb|BC012059.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
21ref|NM_016224.3| Homo sapiens sorting nexin 9 (SNX9), mRNA 40 8.8
22ref|NM_017778.2| Homo sapiens Wolf-Hirschhorn syndrome candidate... 40 8.8
23ref|NM_023034.1| Homo sapiens Wolf-Hirschhorn syndrome candidate... 40 8.8
24gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.8
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.8
26gb|DQ465384.1| Oreochromis mossambicus clone SSH #509 mitochondr... 40 8.8
27gb|BC007787.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
28gb|BC000030.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
29ref|XM_541426.2| PREDICTED: Canis familiaris hypothetical LOC484... 40 8.8
30gb|BC001084.2| Homo sapiens sorting nexin 9, mRNA (cDNA clone IM... 40 8.8
31gb|BC115006.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
32gb|BC073858.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
33emb|AL513322.18| Human DNA sequence from clone RP11-332M15 on ch... 40 8.8
34gb|BT009742.1| Synthetic construct Homo sapiens sorting nexin 9 ... 40 8.8
35emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10... 40 8.8
36emb|AL034561.5|HS692C8 Human DNA sequence from clone RP4-692C8 o... 40 8.8
37gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, compl... 40 8.8
38gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genom... 40 8.8
39gb|BC005022.1| Homo sapiens sorting nexin 9, mRNA (cDNA clone MG... 40 8.8
40emb|AJ295991.1|HSA295991 Homo sapiens mRNA for Putative Chromati... 40 8.8
41emb|AJ295990.1|HSA295990 Homo sapiens mRNA for putative chromati... 40 8.8
42emb|CR860331.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0545 (from cl... 40 8.8
43dbj|AK127345.1| Homo sapiens cDNA FLJ45417 fis, clone BRHIP30338... 40 8.8
44dbj|AK022560.1| Homo sapiens cDNA FLJ12498 fis, clone NT2RM20016... 40 8.8
45ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA 40 8.8
46gb|AF318339.1|AF318339 Homo sapiens pp14328 mRNA, complete cds 40 8.8
47gb|AF172847.1|AF172847 Homo sapiens sorting nexin 9 (SNX9) mRNA,... 40 8.8
48dbj|AB168588.1| Macaca fascicularis testis cDNA clone: QtsA-1324... 40 8.8
49gb|AF121859.1|AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA,... 40 8.8
50gb|AF332469.1|AF332469 Homo sapiens putative protein WHSC1L1l (W... 40 8.8
51gb|AF332468.1|AF332468 Homo sapiens putative protein WHSC1L1s (W... 40 8.8
52dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
53dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
54dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
56dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
59gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 8.8
60dbj|AB182284.1| Mycobacterium sp. P101 mcr gene for 2-Enoyl-CoA ... 40 8.8
61gb|AF255649.1|AF255649 Homo sapiens DC28 mRNA, complete cds 40 8.8
62gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, comple... 40 8.8
63gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, comple... 40 8.8
64dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 8.8
65dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
66dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
67dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
68dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
69gb|AY892921.1| Synthetic construct Homo sapiens clone FLH135182.... 40 8.8
70gb|AY892413.1| Synthetic construct Homo sapiens clone FLH014894.... 40 8.8
71gb|AY892412.1| Synthetic construct Homo sapiens clone FLH014893.... 40 8.8
72gb|AY890463.1| Synthetic construct Homo sapiens clone FLH135186.... 40 8.8
73dbj|AK026637.1| Homo sapiens cDNA: FLJ22984 fis, clone KAT11574,... 40 8.8
74emb|AJ295992.1|HSA295992 Homo sapiens mRNA for putative chromati... 40 8.8
75gb|AF131214.1|AF131214 Homo sapiens SH3 and PX domain-containing... 40 8.8
76gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, com... 40 8.8
77gb|AF076957.1|AF076957 Homo sapiens SDP1 protein mRNA, complete cds 40 8.8
78gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 8.8
79gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
80gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
81dbj|AP003151.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 8.8
82emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.8
83gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complet... 40 8.8
84emb|CT030190.9| Mouse DNA sequence from clone RP23-115D20 on chr... 40 8.8
85gb|BC062631.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1... 40 8.8
86dbj|AB209736.1| Homo sapiens mRNA for sorting nexin 9 variant pr... 40 8.8
87gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, com... 40 8.8 
>gb|AE012148.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 56 of
            460 of the complete genome
          Length = 10978

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 503  atgctcgatgcccatgccagcaccatca 530
            |||||||||||||||||| |||||||||
Sbjct: 8770 atgctcgatgcccatgccggcaccatca 8743
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 503    atgctcgatgcccatgccagcaccatca 530
              |||||||||||||||||| |||||||||
Sbjct: 620764 atgctcgatgcccatgccggcaccatca 620737
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>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15,
              complete sequence
          Length = 140307

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 299    atcttcccttttcagctcctt 319
              |||||||||||||||||||||
Sbjct: 137138 atcttcccttttcagctcctt 137118
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>emb|CR762418.5| Zebrafish DNA sequence from clone RP71-15A9 in linkage group 19,
             complete sequence
          Length = 147881

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   caagacaattgctttttcaat 421
             |||||||||||||||||||||
Sbjct: 75230 caagacaattgctttttcaat 75210
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>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence
          Length = 126010

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   caaactaccttattacaaata 168
             |||||||||||||||||||||
Sbjct: 45639 caaactaccttattacaaata 45659
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>emb|BX640464.10| Zebrafish DNA sequence from clone DKEY-22M8 in linkage group 19, complete
              sequence
          Length = 255824

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 401    caagacaattgctttttcaat 421
              |||||||||||||||||||||
Sbjct: 246931 caagacaattgctttttcaat 246911
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>gb|BC101717.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1,
           transcript variant long, mRNA (cDNA clone MGC:126766
           IMAGE:8069223), complete cds
          Length = 4504

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 479 ccctccacagccaccacctcctcc 502
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>gb|BC107734.1| Homo sapiens cDNA clone IMAGE:4770567, partial cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 881 ccctccacagccaccacctcctcc 904
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>ref|NM_184732.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  ccacagcctccacctcctcc 449
            ||||||||||||||||||||
Sbjct: 1162 ccacagcctccacctcctcc 1143
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>ref|XM_527549.1| PREDICTED: Pan troglodytes similar to Sorting nexin 9 (SH3 and PX
            domain-containing protein 1) (SDP1 protein) (LOC472172),
            mRNA
          Length = 3948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 3492 acaagacaaacagaacatgg 3511
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>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12,
             complete sequence
          Length = 146632

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 34717 ccacagcctccacctcctcc 34736
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    cagcctccacctcctccgga 452
              ||||||||||||||||||||
Sbjct: 474315 cagcctccacctcctccgga 474296
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>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0022B03, complete sequence
          Length = 151814

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 43560 ccacagcctccacctcctcc 43579
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>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0028G07, complete sequence
          Length = 157463

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 15093 ccacagcctccacctcctcc 15074
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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0027P09, complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 58889 ccacagcctccacctcctcc 58870
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>gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, complete sequence
          Length = 167357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  atcttcccttttcagctcct 318
            ||||||||||||||||||||
Sbjct: 2214 atcttcccttttcagctcct 2195
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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 17835 ccacagcctccacctcctcc 17816
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>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10,
             complete sequence
          Length = 138209

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 70724 ccacagcctccacctcctcc 70705
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>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1384_A02, complete sequence
          Length = 100251

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 21809 ccacagcctccacctcctcc 21790
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>gb|BC012059.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1,
           transcript variant short, mRNA (cDNA clone
           IMAGE:4552610), complete cds
          Length = 2836

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 873 ccctccacagccaccacctcctcc 896
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>ref|NM_016224.3| Homo sapiens sorting nexin 9 (SNX9), mRNA
          Length = 4200

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1766 acaagacaaacagaacatgg 1785
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>ref|NM_017778.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1),
           transcript variant short, mRNA
          Length = 3995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
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>ref|NM_023034.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1),
           transcript variant long, mRNA
          Length = 5431

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     cctccacagcctccacctcc 446
               ||||||||||||||||||||
Sbjct: 4765873 cctccacagcctccacctcc 4765892
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 19425875 ccacagcctccacctcctcc 19425856
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>gb|DQ465384.1| Oreochromis mossambicus clone SSH #509 mitochondrial isocitrate
           dehydrogenase 2-like mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 1674

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 365 acgaagacagagttgaagagtttg 388
           |||||| |||||||||||||||||
Sbjct: 423 acgaagccagagttgaagagtttg 446
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>gb|BC007787.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:3546345), partial cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 896 ccctccacagccaccacctcctcc 919
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>gb|BC000030.2| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:3505788), partial cds
          Length = 1135

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 923 ccctccacagccaccacctcctcc 946
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>ref|XM_541426.2| PREDICTED: Canis familiaris hypothetical LOC484310 (LOC484310), mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  cagcctccacctcctccgga 452
            ||||||||||||||||||||
Sbjct: 1165 cagcctccacctcctccgga 1146
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>gb|BC001084.2| Homo sapiens sorting nexin 9, mRNA (cDNA clone IMAGE:2958415),
           partial cds
          Length = 958

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  acaagacaaacagaacatgg 70
           ||||||||||||||||||||
Sbjct: 658 acaagacaaacagaacatgg 677
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>gb|BC115006.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone MGC:131572 IMAGE:7961962), complete cds
          Length = 4467

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 500 ccctccacagccaccacctcctcc 523
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>gb|BC073858.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:4179405)
          Length = 1844

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 431 ccctccacagccaccacctcctcc 454
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>emb|AL513322.18| Human DNA sequence from clone RP11-332M15 on chromosome 1 Contains the
             5' end of the SIL gene for TAL1 (SCL) interrupting locus,
             the 5' end of the  gene for UMP-CMP kinase (UMP-CMPK) and
             a CpG island, complete sequence
          Length = 68049

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 318   ttttgcctcaccttgtcatccctg 341
             ||||||||||||||||||| ||||
Sbjct: 54331 ttttgcctcaccttgtcattcctg 54354
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>gb|BT009742.1| Synthetic construct Homo sapiens sorting nexin 9 mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
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>emb|AL035634.7|HS403L10 Human DNA sequence from clone RP3-403L10 on chromosome 6q25.1-26
           Contains part of the SNX9 gene for sorting nexin 9 (SH3
           and PX domain-containing protein (SH3PX1, SDP1),
           FLJ22984), an HSPE1 (heat shock 10kD protein 1
           (chaperonin 10)) pseudogene and a novel gene, complete
           sequence
          Length = 60215

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  acaagacaaacagaacatgg 70
           ||||||||||||||||||||
Sbjct: 192 acaagacaaacagaacatgg 173
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>emb|AL034561.5|HS692C8 Human DNA sequence from clone RP4-692C8 on chromosome 20p11.22-12.2
             Contains GSSs and STSs, complete sequence
          Length = 125698

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   gaacatcttatcttcatttt 360
             ||||||||||||||||||||
Sbjct: 71949 gaacatcttatcttcatttt 71968
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>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence
          Length = 169076

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttttctacgaagacagagtt 378
              ||||||||||||||||||||
Sbjct: 121247 ttttctacgaagacagagtt 121266
to top
>gb|AC091233.8| Oryza sativa chromosome 3 BAC OSJNBa0053G10 genomic sequence, complete
              sequence
          Length = 145155

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ccacagcctccacctcctcc 449
              ||||||||||||||||||||
Sbjct: 127162 ccacagcctccacctcctcc 127181
to top
>gb|BC005022.1| Homo sapiens sorting nexin 9, mRNA (cDNA clone MGC:12550
            IMAGE:3832234), complete cds
          Length = 2065

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1764 acaagacaaacagaacatgg 1783
to top
>emb|AJ295991.1|HSA295991 Homo sapiens mRNA for Putative Chromatin modulator, alternative
           splice NSD3L2
          Length = 5107

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>emb|AJ295990.1|HSA295990 Homo sapiens mRNA for putative chromatin modulator, alternative
           splice NSD3L
          Length = 5254

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>emb|CR860331.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0545 (from clone DKFZp459D0545)
          Length = 3214

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 457 ccctccacagccaccacctcctcc 480
to top
>dbj|AK127345.1| Homo sapiens cDNA FLJ45417 fis, clone BRHIP3033811, highly  similar
            to Sorting nexin 9
          Length = 3573

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1712 acaagacaaacagaacatgg 1731
to top
>dbj|AK022560.1| Homo sapiens cDNA FLJ12498 fis, clone NT2RM2001668, weakly similar
           to Homo sapiens putative WHSC1 protein (WHSC1) mRNA,
           alternative splice product ending in intron 11
          Length = 3290

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 582 ccctccacagccaccacctcctcc 605
to top
>ref|NM_134476.1| Drosophila melanogaster CG14218-RA (CG14218), mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 427 cctccacagcctccacctcctccg 450
           ||||||| ||||||||||||||||
Sbjct: 508 cctccaccgcctccacctcctccg 531
to top
>gb|AF318339.1|AF318339 Homo sapiens pp14328 mRNA, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 426  ccctccacagcctccacctcctcc 449
            |||||||||||| |||||||||||
Sbjct: 1076 ccctccacagccaccacctcctcc 1099
to top
>gb|AF172847.1|AF172847 Homo sapiens sorting nexin 9 (SNX9) mRNA, complete cds
          Length = 4175

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1737 acaagacaaacagaacatgg 1756
to top
>dbj|AB168588.1| Macaca fascicularis testis cDNA clone: QtsA-13248, similar to human
            sorting nexin 9 (SNX9), mRNA, RefSeq: NM_016224.3
          Length = 2020

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1692 acaagacaaacagaacatgg 1711
to top
>gb|AF121859.1|AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA, complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1617 acaagacaaacagaacatgg 1636
to top
>gb|AF332469.1|AF332469 Homo sapiens putative protein WHSC1L1l (WHSC1L1) mRNA, complete
           cds, alternatively spliced
          Length = 5431

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>gb|AF332468.1|AF332468 Homo sapiens putative protein WHSC1L1s (WHSC1L1) mRNA, complete
           cds, alternatively spliced
          Length = 3995

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 905 ccctccacagccaccacctcctcc 928
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 26892868 ccacagcctccacctcctcc 26892849
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 17421079 ccacagcctccacctcctcc 17421060



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 15649208 ccacagcctccacctcctcc 15649189
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 13447090 ccacagcctccacctcctcc 13447109
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 430     ccacagcctccacctcctcc 449
               ||||||||||||||||||||
Sbjct: 8046534 ccacagcctccacctcctcc 8046515



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 430     ccacagcctccacctcctcc 449
               ||||||||||||||||||||
Sbjct: 6337326 ccacagcctccacctcctcc 6337307
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 16279542 ccacagcctccacctcctcc 16279561
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 10058044 ccacagcctccacctcctcc 10058063



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 430     ccacagcctccacctcctcc 449
               ||||||||||||||||||||
Sbjct: 8225321 ccacagcctccacctcctcc 8225302



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 430     ccacagcctccacctcctcc 449
               ||||||||||||||||||||
Sbjct: 7634329 ccacagcctccacctcctcc 7634310
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 19418902 ccacagcctccacctcctcc 19418883
to top
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
              BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    cctccacagcctccacctcctccg 450
              ||||||| ||||||||||||||||
Sbjct: 122296 cctccaccgcctccacctcctccg 122273
to top
>dbj|AB182284.1| Mycobacterium sp. P101 mcr gene for 2-Enoyl-CoA hydratase,
            alpha-Methylacyl-CoA racemase, 3-Hydroxyacyl-CoA
            dehydrogenase, 2-Nitropropane dioxygenase, complete cds
          Length = 9100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  gccagcaccatcaccagacc 537
            ||||||||||||||||||||
Sbjct: 2781 gccagcaccatcaccagacc 2762
to top
>gb|AF255649.1|AF255649 Homo sapiens DC28 mRNA, complete cds
          Length = 3374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 504 ccctccacagccaccacctcctcc 527
to top
>gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, complete sequence
          Length = 159748

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 45    aaggcaacaagacaaacagaacatgggt 72
             |||||||||| || ||||||||||||||
Sbjct: 64518 aaggcaacaacaccaacagaacatgggt 64545
to top
>gb|AC114313.2| Homo sapiens chromosome 5 clone RP11-30D9, complete sequence
          Length = 109840

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    ttttctacgaagacagagtt 378
              ||||||||||||||||||||
Sbjct: 101011 ttttctacgaagacagagtt 101030
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     cctccacagcctccacctcc 446
               ||||||||||||||||||||
Sbjct: 3787002 cctccacagcctccacctcc 3787021
to top
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0026F02
          Length = 132237

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ccacagcctccacctcctcc 449
              ||||||||||||||||||||
Sbjct: 104434 ccacagcctccacctcctcc 104453
to top
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 84731 ccacagcctccacctcctcc 84712
to top
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 87886 ccacagcctccacctcctcc 87867
to top
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1120_B07
          Length = 118763

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 83817 ccacagcctccacctcctcc 83836
to top
>gb|AY892921.1| Synthetic construct Homo sapiens clone FLH135182.01L
           Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1)
           mRNA, partial cds
          Length = 1938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 387 ccctccacagccaccacctcctcc 410
to top
>gb|AY892413.1| Synthetic construct Homo sapiens clone FLH014894.01L sorting nexin 9
            (SNX9) mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
to top
>gb|AY892412.1| Synthetic construct Homo sapiens clone FLH014893.01L sorting nexin 9
            (SNX9) mRNA, partial cds
          Length = 1788

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1593 acaagacaaacagaacatgg 1612
to top
>gb|AY890463.1| Synthetic construct Homo sapiens clone FLH135186.01X
           Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1)
           mRNA, complete cds
          Length = 1938

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 387 ccctccacagccaccacctcctcc 410
to top
>dbj|AK026637.1| Homo sapiens cDNA: FLJ22984 fis, clone KAT11574, highly similar to
            AF121859 Homo sapiens sorting nexin 9 (SNX9) mRNA
          Length = 1699

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1402 acaagacaaacagaacatgg 1421
to top
>emb|AJ295992.1|HSA295992 Homo sapiens mRNA for putative chromatin modulator, alternative
           splice NSD3S
          Length = 3790

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 700 ccctccacagccaccacctcctcc 723
to top
>gb|AF131214.1|AF131214 Homo sapiens SH3 and PX domain-containing protein SH3PX1 (SH3PX1)
            mRNA, complete cds
          Length = 2310

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1636 acaagacaaacagaacatgg 1655
to top
>gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, complete sequence
          Length = 200174

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   atcttcccttttcagctcct 318
             ||||||||||||||||||||
Sbjct: 34195 atcttcccttttcagctcct 34214
to top
>gb|AF076957.1|AF076957 Homo sapiens SDP1 protein mRNA, complete cds
          Length = 1456

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 1077 acaagacaaacagaacatgg 1096
to top
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    cctccacagcctccacctcctccg 450
              ||||||| ||||||||||||||||
Sbjct: 228062 cctccaccgcctccacctcctccg 228039
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 17514789 ccacagcctccacctcctcc 17514770



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 15736585 ccacagcctccacctcctcc 15736566
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 430      ccacagcctccacctcctcc 449
                ||||||||||||||||||||
Sbjct: 26821038 ccacagcctccacctcctcc 26821019
to top
>dbj|AP003151.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-340N5, complete
              sequences
          Length = 160143

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     cataagagtaaacaaaaatg 29
              ||||||||||||||||||||
Sbjct: 120337 cataagagtaaacaaaaatg 120318
to top
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 142370

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ccacagcctccacctcctcc 449
             ||||||||||||||||||||
Sbjct: 96835 ccacagcctccacctcctcc 96816
to top
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    cctccacagcctccacctcc 446
              ||||||||||||||||||||
Sbjct: 109603 cctccacagcctccacctcc 109622
to top
>emb|CT030190.9| Mouse DNA sequence from clone RP23-115D20 on chromosome 16, complete
             sequence
          Length = 228196

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cataagagtaaacaaaaatg 29
             ||||||||||||||||||||
Sbjct: 53618 cataagagtaaacaaaaatg 53599
to top
>gb|BC062631.1| Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1, mRNA
           (cDNA clone IMAGE:5246860), complete cds
          Length = 3055

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 426 ccctccacagcctccacctcctcc 449
           |||||||||||| |||||||||||
Sbjct: 844 ccctccacagccaccacctcctcc 867
to top
>dbj|AB209736.1| Homo sapiens mRNA for sorting nexin 9 variant protein
          Length = 7717

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   acaagacaaacagaacatgg 70
            ||||||||||||||||||||
Sbjct: 3690 acaagacaaacagaacatgg 3709
to top
>gb|AC087362.13| Homo sapiens chromosome 8, clone RP11-513D5, complete sequence
          Length = 142170

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 426    ccctccacagcctccacctcctcc 449
              |||||||||||| |||||||||||
Sbjct: 107784 ccctccacagccaccacctcctcc 107761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,961,454
Number of Sequences: 3902068
Number of extensions: 7961454
Number of successful extensions: 149895
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149301
Number of HSP's gapped (non-prelim): 594
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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