Clone Name	rbasd19j09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clon...	539	e-150
2	dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clon...	539	e-150
3	dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mR...	539	e-150
4	ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predic...	486	e-134
5	gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence	355	1e-94
6	gb|AY105052.1| Zea mays PCO138078 mRNA sequence	355	1e-94
7	gb|AY110243.1| Zea mays CL2786_1 mRNA sequence	349	6e-93
8	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	137	5e-29
9	gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome...	137	5e-29
10	ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ pepti...	92	2e-15
11	ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ pepti...	92	2e-15
12	emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome s...	92	2e-15
13	gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds	92	2e-15
14	gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit ...	92	2e-15
15	gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta ...	92	2e-15
16	gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete s...	84	6e-13
17	gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-7...	80	9e-12
18	ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ pepti...	68	3e-08
19	ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ pepti...	68	3e-08
20	emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome s...	68	3e-08
21	gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete s...	68	3e-08
22	gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta ...	68	3e-08
23	dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	64	5e-07
24	dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	64	5e-07
25	gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit ...	60	9e-06
26	gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit ...	60	9e-06
27	gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr...	44	0.51
28	ref|NM_001032780.1| Ciona intestinalis proteasome Z subunit (zet...	44	0.51
29	ref|XM_570084.1| Cryptococcus neoformans var. neoformans JEC21 p...	44	0.51
30	emb|AJ002142.1|CIRNAPZS Ciona intestinalis mRNA for proteasome Z...	44	0.51
31	emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in l...	44	0.51
32	dbj|AK174283.1| Ciona intestinalis cDNA, clone:cicl021b24, full ...	44	0.51
33	dbj|AK173394.1| Ciona intestinalis cDNA, clone:cilv021p14, full ...	44	0.51
34	emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in l...	44	0.51
35	ref|XM_419843.1| PREDICTED: Gallus gallus similar to mRNA cappin...	42	2.0
36	emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1...	42	2.0
37	gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-...	40	7.9
38	gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric re...	40	7.9
39	gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome...	40	7.9
40	gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome...	40	7.9
41	gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome...	40	7.9
42	emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 ...	40	7.9
43	gb|CP000001.1| Bacillus cereus E33L, complete genome	40	7.9
44	ref|NM_131675.1| Danio rerio proteasome (prosome, macropain) sub...	40	7.9
45	ref|XM_962112.1| PREDICTED: Tribolium castaneum similar to neuro...	40	7.9
46	emb|AL772368.5| Zebrafish DNA sequence from clone CH211-167P9 in...	40	7.9
47	gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswel...	40	7.9
48	gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswel...	40	7.9
49	ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA	40	7.9
50	ref|XM_701677.1| PREDICTED: Danio rerio similar to proteasome (p...	40	7.9
51	ref|XM_677810.1| PREDICTED: Danio rerio similar to proteasome (p...	40	7.9
52	gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, r...	40	7.9
53	gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Canc...	40	7.9
54	gb|BC092728.1| Danio rerio proteasome (prosome, macropain) subun...	40	7.9
55	emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF,...	40	7.9
56	gb|AY104327.1| Zea mays PCO078604 mRNA sequence	40	7.9
57	gb|AF155581.1|AF155581 Danio rerio proteasome subunit beta 7 (PS...	40	7.9
58	emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in ...	40	7.9
59	gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 ...	40	7.9
60	gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60...	40	7.9
61	gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ...	40	7.9
62	gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, r...	40	7.9
63	gb|AF064601.1|AF064601 Xenopus laevis homeobox protein (Vax1) mR...	40	7.9
64	gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138...	40	7.9
65	gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complet...	40	7.9
66	gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, com...	40	7.9

---

>dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full
            insert sequence
          Length = 1195

 Score =  539 bits (272), Expect = e-150
 Identities = 457/519 (88%)
 Strand = Plus / Minus

                                                                        
Query: 64   tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 123
            ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 1067 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 1008

                                                                        
Query: 124  cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 183
            |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 1007 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 948

                                                                        
Query: 184  tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 243
            ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 947  tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 888

                                                                        
Query: 244  agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 303
            |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 887  agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 828

                                                                        
Query: 304  cattnaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 363
            |||| ||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 827  cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 768

                                                                        
Query: 364  ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 423
            |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 767  ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 708

                                                                        
Query: 424  tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 483
            |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 707  tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 648

                                                                        
Query: 484  tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 543
            | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 647  taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 588

                                                   
Query: 544  gggtcttcagtagtgtaagagcggttacaactcttgact 582
            | | |||||||| |||||||| |||||||||||| ||||
Sbjct: 587  gcgacttcagtaatgtaagagaggttacaactctggact 549

---

>dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F11, full
           insert sequence
          Length = 750

 Score =  539 bits (272), Expect = e-150
 Identities = 457/519 (88%)
 Strand = Plus / Minus

                                                                       
Query: 64  tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 123
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 634 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 575

                                                                       
Query: 124 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 183
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 574 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 515

                                                                       
Query: 184 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 243
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 514 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 455

                                                                       
Query: 244 agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 303
           |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 454 agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 395

                                                                       
Query: 304 cattnaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 363
           |||| ||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 394 cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 335

                                                                       
Query: 364 ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 423
           |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 334 ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 275

                                                                       
Query: 424 tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 483
           |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 274 tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 215

                                                                       
Query: 484 tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 543
           | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 214 taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 155

                                                  
Query: 544 gggtcttcagtagtgtaagagcggttacaactcttgact 582
           | | |||||||| |||||||| |||||||||||| ||||
Sbjct: 154 gcgacttcagtaatgtaagagaggttacaactctggact 116

---

>dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mRNA for beta 2
           subunit of 20S proteasome, complete cds
          Length = 1122

 Score =  539 bits (272), Expect = e-150
 Identities = 457/519 (88%)
 Strand = Plus / Minus

                                                                       
Query: 64  tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 123
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 960 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 901

                                                                       
Query: 124 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 183
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 900 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 841

                                                                       
Query: 184 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 243
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 840 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 781

                                                                       
Query: 244 agtactctgtattccccttggttatcacacaaacatccacgttgctgccacttcccaagt 303
           |||||||||| ||||||||||| || || ||||||||||| ||||||||||| |||||||
Sbjct: 780 agtactctgtcttccccttggtgattacgcaaacatccacattgctgccactgcccaagt 721

                                                                       
Query: 304 cattnaagataccagcacggattgcctcggctacaagtgcaattccctcctcccttgtga 363
           |||| ||||||||| |||| |||||||| || ||||||   |||||||||||||||||||
Sbjct: 720 cattgaagataccaccacgaattgcctcagcaacaagttgtattccctcctcccttgtga 661

                                                                       
Query: 364 ggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacccatcg 423
           |||||||| |||||||| | |||||||||||||| || |||||||||||||||||||| |
Sbjct: 660 ggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacccattg 601

                                                                       
Query: 424 tggcaaaaggaagagtatcggtggagccatgcggataaacagtgtgtagatgtggtccag 483
           |||||||||||||||| || ||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 600 tggcaaaaggaagagtgtccgtggagccatgtggataaacagtgtgcaggtgtggcccag 541

                                                                       
Query: 484 tgacatctactccgccaagaacaagagcagcactgacatgaccttggtagttaaaaaggt 543
           | ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 540 taacatctactccaccaagaacaagggcagcactgacatgaccttggtagctaaaaaggt 481

                                                  
Query: 544 gggtcttcagtagtgtaagagcggttacaactcttgact 582
           | | |||||||| |||||||| |||||||||||| ||||
Sbjct: 480 gcgacttcagtaatgtaagagaggttacaactctggact 442

---

>ref|XM_476072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  486 bits (245), Expect = e-134
 Identities = 427/488 (87%)
 Strand = Plus / Minus

                                                                       
Query: 95  tcactcttccattgcatcaccatcagctacctctggcttcagcttcagctgcgtgatctt 154
           |||||| |||||||||||||| || |  ||||||  |||| ||||||| || || |||||
Sbjct: 819 tcactcctccattgcatcaccctctgtcacctctaccttcggcttcagttgtgttatctt 760

                                                                       
Query: 155 tgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactgacaaaagt 214
           ||| ||||| ||| | || ||||||||| ||||| |||| ||||| ||||| ||  ||||
Sbjct: 759 tgtggacaacaccacagtctgccccttggtgaagttgtaccccttcgaactaacgtaagt 700

                                                                       
Query: 215 cctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggttatcacaca 274
           ||| || |||||||||| ||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 699 ccttggatttggtaactggtggtttctcaagtactctgtcttccccttggtgattacgca 640

                                                                       
Query: 275 aacatccacgttgctgccacttcccaagtcattnaagataccagcacggattgcctcggc 334
           ||||||||| ||||||||||| ||||||||||| ||||||||| |||| |||||||| ||
Sbjct: 639 aacatccacattgctgccactgcccaagtcattgaagataccaccacgaattgcctcagc 580

                                                                       
Query: 335 tacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactcaaacactga 394
            ||||||   ||||||||||||||||||||||||||| |||||||| | |||||||||||
Sbjct: 579 aacaagttgtattccctcctcccttgtgaggccttctttgtacttcgattcaaacactga 520

                                                                       
Query: 395 catcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatg 454
           ||| || |||||||||||||||||||| ||||||||||||||||| || |||||||||||
Sbjct: 519 cattgccgcaagggatccagaacccattgtggcaaaaggaagagtgtccgtggagccatg 460

                                                                       
Query: 455 cggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagc 514
            |||||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 459 tggataaacagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagc 400

                                                                       
Query: 515 actgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaagagcggttacaac 574
           ||||||||||||||||||| |||||||||| | |||||||| |||||||| |||||||||
Sbjct: 399 actgacatgaccttggtagctaaaaaggtgcgacttcagtaatgtaagagaggttacaac 340

                   
Query: 575 tcttgact 582
           ||| ||||
Sbjct: 339 tctggact 332

---

>gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence
          Length = 1144

 Score =  355 bits (179), Expect = 1e-94
 Identities = 370/434 (85%)
 Strand = Plus / Minus

                                                                       
Query: 147 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 206
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 866 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 807

                                                                       
Query: 207 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 266
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 806 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 747

                                                                       
Query: 267 atcacacaaacatccacgttgctgccacttcccaagtcattnaagataccagcacggatt 326
           ||||| || || ||||||||||| ||||| ||||||||||| || |||||||||| ||||
Sbjct: 746 atcacgcagacgtccacgttgctcccactacccaagtcattgaaaataccagcacagatt 687

                                                                       
Query: 327 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 386
           || |||   ||||     |||||||||||||| || ||||||||| |||||||| | |||
Sbjct: 686 gcttcgcacacaatctgtattccctcctccctagtaaggccttctttgtacttcgattca 627

                                                                       
Query: 387 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 446
           ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 626 aacactgacattgcagcaagagaaccagagcccatggtggcaaaaggaagagtatcagtg 567

                                                                       
Query: 447 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 506
           || || || |||||||||||||||| |||||| |||||   ||| ||||| |||||||||
Sbjct: 566 gacccgtgtggataaacagtgtgtaaatgtggcccagtacaatccactccaccaagaaca 507

                                                                       
Query: 507 agagcagcactgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaagagcg 566
           || |||||||||||||| ||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 506 agggcagcactgacatggccttgatacttgaagaggtgtgacttcagtagtgtaagagca 447

                         
Query: 567 gttacaactcttga 580
           ||||||||||||||
Sbjct: 446 gttacaactcttga 433

---

>gb|AY105052.1| Zea mays PCO138078 mRNA sequence
          Length = 1368

 Score =  355 bits (179), Expect = 1e-94
 Identities = 370/434 (85%)
 Strand = Plus / Minus

                                                                       
Query: 147 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 206
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 960 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 901

                                                                       
Query: 207 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 266
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 900 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 841

                                                                       
Query: 267 atcacacaaacatccacgttgctgccacttcccaagtcattnaagataccagcacggatt 326
           ||||| || || ||||||||||| ||||| ||||||||||| || |||||||||| ||||
Sbjct: 840 atcacgcagacgtccacgttgctcccactacccaagtcattgaaaataccagcacagatt 781

                                                                       
Query: 327 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 386
           || |||   ||||     |||||||||||||| || ||||||||| |||||||| | |||
Sbjct: 780 gcttcgcacacaatctgtattccctcctccctagtaaggccttctttgtacttcgattca 721

                                                                       
Query: 387 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 446
           ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 720 aacactgacattgcagcaagagaaccagagcccatggtggcaaaaggaagagtatcagtg 661

                                                                       
Query: 447 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 506
           || || || |||||||||||||||| |||||| |||||   ||| ||||| |||||||||
Sbjct: 660 gacccgtgtggataaacagtgtgtaaatgtggcccagtacaatccactccaccaagaaca 601

                                                                       
Query: 507 agagcagcactgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaagagcg 566
           || |||||||||||||| ||||| || || || ||||| | |||||||||||||||||| 
Sbjct: 600 agggcagcactgacatggccttgatacttgaagaggtgtgacttcagtagtgtaagagca 541

                         
Query: 567 gttacaactcttga 580
           ||||||||||||||
Sbjct: 540 gttacaactcttga 527

---

>gb|AY110243.1| Zea mays CL2786_1 mRNA sequence
          Length = 1029

 Score =  349 bits (176), Expect = 6e-93
 Identities = 367/431 (85%)
 Strand = Plus / Plus

                                                                       
Query: 147 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 206
           ||||||||||  ||||| ||||| || ||||||||| ||||||| |||||||||||||| 
Sbjct: 467 gtgatctttgcggacaacacctcagtctgccccttggtgaagctatatccctttgaacta 526

                                                                       
Query: 207 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 266
           ||| |||| || || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 527 acataagttctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 586

                                                                       
Query: 267 atcacacaaacatccacgttgctgccacttcccaagtcattnaagataccagcacggatt 326
           ||||| || |||||||| ||||| ||||| ||||||||||| |||||||| ||||  |||
Sbjct: 587 atcacgcagacatccacattgcttccactacccaagtcattgaagatacctgcacatatt 646

                                                                       
Query: 327 gcctcggctacaagtgcaattccctcctcccttgtgaggccttctctgtacttcaactca 386
           || || |  || |||   |||||||| ||||| |||||||| ||| | |||||| | |||
Sbjct: 647 gcttctgacaccagttgtattccctcttccctagtgaggccctctttatacttcgattca 706

                                                                       
Query: 387 aacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcggtg 446
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 707 aacactgacattgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcagtg 766

                                                                       
Query: 447 gagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaagaaca 506
           ||||| || |||||||||||||| ||||| ||||||||   ||| ||||| |||||||||
Sbjct: 767 gagccgtgtggataaacagtgtgaagatgcggtccagtacaatccactccaccaagaaca 826

                                                                       
Query: 507 agagcagcactgacatgaccttggtagttaaaaaggtgggtcttcagtagtgtaagagcg 566
           || |||||||||||||| ||||| ||  |||| || || | |||||| ||||||||||| 
Sbjct: 827 agggcagcactgacatggccttgatacctaaagagatgtgacttcagcagtgtaagagca 886

                      
Query: 567 gttacaactct 577
           ||||| |||||
Sbjct: 887 gttacgactct 897

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                           
Query: 359     tgtgaggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacc 418
               ||||||||||||| |||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 5279388 tgtgaggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacc 5279329

                                                            
Query: 419     catcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
               ||| ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 5279328 cattgtggcaaaaggaagagtgtccgtggagccatgtggataaac 5279284



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                           
Query: 462     acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 521
               |||||||| || ||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 5279201 acagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagcactgaca 5279142

                                 
Query: 522     tgaccttggtagttaaaa 539
               |||||||||||| |||||
Sbjct: 5279141 tgaccttggtagctaaaa 5279124



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                           
Query: 259     ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattnaagataccag 318
               ||||||| || || ||||||||||| ||||||||||| ||||||||||| ||||||||| 
Sbjct: 5279630 ccttggtgattacgcaaacatccacattgctgccactgcccaagtcattgaagataccac 5279571

                                                       
Query: 319     cacggattgcctcggctacaagtgcaattccctcctccct 358
               |||| |||||||| || ||||||   ||||||||||||||
Sbjct: 5279570 cacgaattgcctcagcaacaagttgtattccctcctccct 5279531



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                           
Query: 64      tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 123
               ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 5280342 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 5280283

                                                       
Query: 124     cctctggcttcagcttcagctgcgtgatctttgtagacaa 163
               |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 5280282 cctctaccttcggcttcagttgtgttatctttgtggacaa 5280243



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                           
Query: 174     tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 233
               ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 5280147 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 5280088

                                           
Query: 234     tggtttctcaagtactctgtattcccct 261
               |||||||||||||||||||| |||||||
Sbjct: 5280087 tggtttctcaagtactctgtcttcccct 5280060



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                               
Query: 535     taaaaaggtgggtcttcagtagtgtaagagcggttacaactcttgact 582
               |||||||||| | |||||||| |||||||| |||||||||||| ||||
Sbjct: 5279018 taaaaaggtgcgacttcagtaatgtaagagaggttacaactctggact 5278971

---

>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                         
Query: 359   tgtgaggccttctctgtacttcaactcaaacactgacatcgcagcaagggatccagaacc 418
             ||||||||||||| |||||||| | |||||||||||||| || |||||||||||||||||
Sbjct: 16089 tgtgaggccttctttgtacttcgattcaaacactgacattgccgcaagggatccagaacc 16030

                                                          
Query: 419   catcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
             ||| ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 16029 cattgtggcaaaaggaagagtgtccgtggagccatgtggataaac 15985



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                         
Query: 462   acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 521
             |||||||| || ||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 15902 acagtgtgcaggtgtggcccagtaacatctactccaccaagaacaagggcagcactgaca 15843

                               
Query: 522   tgaccttggtagttaaaa 539
             |||||||||||| |||||
Sbjct: 15842 tgaccttggtagctaaaa 15825



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 259   ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattnaagataccag 318
             ||||||| || || ||||||||||| ||||||||||| ||||||||||| ||||||||| 
Sbjct: 16331 ccttggtgattacgcaaacatccacattgctgccactgcccaagtcattgaagataccac 16272

                                                     
Query: 319   cacggattgcctcggctacaagtgcaattccctcctccct 358
             |||| |||||||| || ||||||   ||||||||||||||
Sbjct: 16271 cacgaattgcctcagcaacaagttgtattccctcctccct 16232



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 64    tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 123
             ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 17043 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 16984

                                                     
Query: 124   cctctggcttcagcttcagctgcgtgatctttgtagacaa 163
             |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 16983 cctctaccttcggcttcagttgtgttatctttgtggacaa 16944



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                         
Query: 174   tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 233
             ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 16848 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 16789

                                         
Query: 234   tggtttctcaagtactctgtattcccct 261
             |||||||||||||||||||| |||||||
Sbjct: 16788 tggtttctcaagtactctgtcttcccct 16761



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 535   taaaaaggtgggtcttcagtagtgtaagagcggttacaactcttgact 582
             |||||||||| | |||||||| |||||||| |||||||||||| ||||
Sbjct: 15719 taaaaaggtgcgacttcagtaatgtaagagaggttacaactctggact 15672

---

>ref|NM_180310.1| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.1 mRNA, complete cds
          Length = 1228

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 511 accttggtag 502

---

>ref|NM_113658.2| Arabidopsis thaliana PBB1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G27430 (PBB1) transcript variant
           AT3G27430.2 mRNA, complete cds
          Length = 1230

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 511 accttggtag 502

---

>emb|Y13178.1|ATY13178 Arabidopsis thaliana mRNA for proteasome subunit prcfa
          Length = 1068

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 593 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 534

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 533 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 474

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 473 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 414

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 413 accttggtag 404

---

>gb|BT006306.1| Arabidopsis thaliana At3g27430 mRNA, complete cds
          Length = 822

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 573 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 514

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 513 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 454

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 453 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 394

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 393 accttggtag 384

---

>gb|BT003339.1| Arabidopsis thaliana 20S proteasome beta subunit (PBB1) (At3g27430)
           mRNA, complete cds
          Length = 1067

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 691 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 632

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 631 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 572

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 571 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 512

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 511 accttggtag 502

---

>gb|AF043530.1|AF043530 Arabidopsis thaliana 20S proteasome beta subunit PBB1 (PBB1) mRNA,
           complete cds
          Length = 1068

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 593 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 534

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| ||||| || |||||||| || || || || || || || | 
Sbjct: 533 aagagaacccgaacccattgtggcgaatggaagagtgtcagttgaaccgtgtgggtatat 474

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 473 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 414

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 413 accttggtag 404

---

>gb|AY086464.1| Arabidopsis thaliana clone 25264 mRNA, complete sequence
          Length = 1120

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 153/190 (80%)
 Strand = Plus / Minus

                                                                       
Query: 344 aattccctcctcccttgtgaggccttctctgtacttcaactcaaacactgacatcgcagc 403
           |||||| || ||||| || ||||||||| | |||||   ||||||||| ||||| |||||
Sbjct: 666 aattccttcatccctagttaggccttctttatactttgcctcaaacacagacatagcagc 607

                                                                       
Query: 404 aagggatccagaacccatcgtggcaaaaggaagagtatcggtggagccatgcggataaac 463
           ||| || || |||||||| || || || |||||||| || || || || || || || | 
Sbjct: 606 aagagaacccgaacccattgtagcgaatggaagagtgtcagttgaaccgtgtgggtatat 547

                                                                       
Query: 464 agtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgacatg 523
           ||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||||
Sbjct: 546 agtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagacatg 487

                     
Query: 524 accttggtag 533
           ||||||||||
Sbjct: 486 accttggtag 477

---

>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence
          Length = 116865

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                          
Query: 259    ccttggttatcacacaaacatccacgttgctgccacttcccaagtcattnaagataccag 318
              |||||||||||||||||||||| || || || ||||||||||||||||| || |||||||
Sbjct: 106030 ccttggttatcacacaaacatcaacattacttccacttcccaagtcattaaatataccag 106089

                 
Query: 319    cac 321
              |||
Sbjct: 106090 cac 106092



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                          
Query: 461    aacagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgac 520
              ||||||||||| ||| ||||||||||  || || || |||||||| |  |||||   |||
Sbjct: 107640 aacagtgtgtaaatgcggtccagtgatgtcaaccccaccaagaactaaggcagctgagac 107699

                          
Query: 521    atgaccttggta 532
              ||||||||||||
Sbjct: 107700 atgaccttggta 107711

---

>ref|NM_180777.1| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.1 mRNA, complete cds
          Length = 1176

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 682 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 623

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 622 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 563

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 562 acaagagcagctgagacatggccttggtag 533

---

>ref|NM_123422.2| Arabidopsis thaliana PBB2; endopeptidase/ peptidase/ threonine
           endopeptidase AT5G40580 (PBB2) transcript variant
           AT5G40580.2 mRNA, complete cds
          Length = 1106

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 612 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 553

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 552 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 493

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 492 acaagagcagctgagacatggccttggtag 463

---

>emb|Y13177.1|ATY13177 Arabidopsis thaliana mRNA for proteasome subunit prcfc
          Length = 866

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 365 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 306

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 305 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 246

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 245 acaagagcagctgagacatggccttggtag 216

---

>gb|AY087750.1| Arabidopsis thaliana clone 38185 mRNA, complete sequence
          Length = 1176

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 682 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 623

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 622 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 563

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 562 acaagagcagctgagacatggccttggtag 533

---

>gb|AF043531.1|AF043531 Arabidopsis thaliana 20S proteasome beta subunit PBB2 (PBB2) mRNA,
           complete cds
          Length = 1085

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           |||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 573 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagtgtca 514

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 513 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 454

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 453 acaagagcagctgagacatggccttggtag 424

---

>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 462   acagtgtgtagatgtggtccagtgacatctactccgccaagaacaagagcagcactgaca 521
             ||||| || |||||||| ||||||| ||| ||||| || || ||||||||||||  ||||
Sbjct: 54334 acagtatgcagatgtggaccagtgatatcaactccaccgagtacaagagcagcagagaca 54275

                         
Query: 522   tgaccttggtag 533
             ||||||||||||
Sbjct: 54274 tgaccttggtag 54263

---

>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 384   tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagt 439
             |||||||||||||| ||||||||||| ||||||||||| || ||||| || |||||
Sbjct: 23947 tcaaacactgacatggcagcaagggaaccagaacccattgtagcaaatggtagagt 24002

---

>gb|AY114591.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 957

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           ||||||||||||||  |||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 533 tcaaacactgacatgacagcaagggaaccagaacccattgtagcaaatggtagagtgtca 474

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 473 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 414

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 413 acaagagcagctgagacatggccttggtag 384

---

>gb|AY093011.1| Arabidopsis thaliana 20S proteasome beta subunit PBB2 (At5g40580)
           mRNA, complete cds
          Length = 1105

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 384 tcaaacactgacatcgcagcaagggatccagaacccatcgtggcaaaaggaagagtatcg 443
           ||||||||||||||  |||||||||| ||||||||||| || ||||| || ||||| || 
Sbjct: 612 tcaaacactgacatgacagcaagggaaccagaacccattgtagcaaatggtagagtgtca 553

                                                                       
Query: 444 gtggagccatgcggataaacagtgtgtagatgtggtccagtgacatctactccgccaaga 503
           || || || || || || |  ||||| ||||| || || || | ||| ||||| ||||| 
Sbjct: 552 gtagaaccgtgtgggtatatcgtgtgaagatgaggcccggtaatatcaactccaccaagc 493

                                         
Query: 504 acaagagcagcactgacatgaccttggtag 533
           |||||||||||   |||||| |||||||||
Sbjct: 492 acaagagcagctgagacatggccttggtag 463

---

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 488     atctactccgccaagaacaaga 509
               ||||||||||||||||||||||
Sbjct: 1713091 atctactccgccaagaacaaga 1713112

---

>ref|NM_001032780.1| Ciona intestinalis proteasome Z subunit (zeta), mRNA
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 488 atctactccgccaagaacaagagcagcactgacatgaccttg 529
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 501 atctactcctcccagcaccaaagcagcactgacatgaccttg 460

---

>ref|XM_570084.1| Cryptococcus neoformans var. neoformans JEC21
           phosphatidyl-N-methylethanolamine N-methyltransferase
           (CND06200) partial mRNA
          Length = 948

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 488 atctactccgccaagaacaaga 509
           ||||||||||||||||||||||
Sbjct: 649 atctactccgccaagaacaaga 670

---

>emb|AJ002142.1|CIRNAPZS Ciona intestinalis mRNA for proteasome Z subunit
          Length = 1231

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 488 atctactccgccaagaacaagagcagcactgacatgaccttg 529
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 501 atctactcctcccagcaccaaagcagcactgacatgaccttg 460

---

>emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in linkage group 22,
             complete sequence
          Length = 57918

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 23    aagcactgagaaaaaagaagaaatgg 48
             ||||||||| ||||||||||||||||
Sbjct: 33366 aagcactgaaaaaaaagaagaaatgg 33341

---

>dbj|AK174283.1| Ciona intestinalis cDNA, clone:cicl021b24, full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 488 atctactccgccaagaacaagagcagcactgacatgaccttg 529
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 478 atctactcctcccagcaccaaagcagcactgacatgaccttg 437

---

>dbj|AK173394.1| Ciona intestinalis cDNA, clone:cilv021p14, full insert sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 488 atctactccgccaagaacaagagcagcactgacatgaccttg 529
           ||||||||| || || || | |||||||||||||||||||||
Sbjct: 477 atctactcctcccagcaccaaagcagcactgacatgaccttg 436

---

>emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in linkage group 22, complete
              sequence
          Length = 155796

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 23     aagcactgagaaaaaagaagaaatgg 48
              ||||||||| ||||||||||||||||
Sbjct: 107650 aagcactgaaaaaaaagaagaaatgg 107675

---

>ref|XM_419843.1| PREDICTED: Gallus gallus similar to mRNA capping enzyme
           (LOC421819), mRNA
          Length = 3106

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 385 caaacactgacatcgcagcaa 405
           |||||||||||||||||||||
Sbjct: 559 caaacactgacatcgcagcaa 539

---

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 175     gccccttgttgaagctgtatc 195
               |||||||||||||||||||||
Sbjct: 2497372 gccccttgttgaagctgtatc 2497392

---

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      agaaatggcgcaaattctta 60
               ||||||||||||||||||||
Sbjct: 1001598 agaaatggcgcaaattctta 1001617

---

>gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric repeat sequence
          Length = 157

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  tgagaaaaaagaagaaatgg 48
           ||||||||||||||||||||
Sbjct: 148 tgagaaaaaagaagaaatgg 129

---

>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence
          Length = 202934

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    catcagctacctctggcttcagct 138
              ||||||||||||||||| ||||||
Sbjct: 123045 catcagctacctctggcatcagct 123068

---

>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence
          Length = 185838

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ctagaacaagcactgagaaa 35
             ||||||||||||||||||||
Sbjct: 13938 ctagaacaagcactgagaaa 13919

---

>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ctagaacaagcactgagaaa 35
              ||||||||||||||||||||
Sbjct: 150305 ctagaacaagcactgagaaa 150286

---

>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17,
             complete sequence
          Length = 198387

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    cactgagaaaaaagaagaaatggc 49
             |||||||||| |||||||||||||
Sbjct: 49849 cactgagaaataagaagaaatggc 49826

---

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      agaaatggcgcaaattctta 60
               ||||||||||||||||||||
Sbjct: 1134799 agaaatggcgcaaattctta 1134818

---

>ref|NM_131675.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 7
           (psmb7), mRNA
          Length = 969

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 297 cccaagtcattnaagataccagc 319
           ||||||||||| |||||||||||
Sbjct: 638 cccaagtcattgaagataccagc 616

---

>ref|XM_962112.1| PREDICTED: Tribolium castaneum similar to neuron navigator 2 isoform
            2 (LOC655559), mRNA
          Length = 5778

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 384  tcaaacactgacatcgcagc 403
            ||||||||||||||||||||
Sbjct: 3693 tcaaacactgacatcgcagc 3712

---

>emb|AL772368.5| Zebrafish DNA sequence from clone CH211-167P9 in linkage group 21
              Contains a novel gene similar to human and rodent NR6A1
              (nuclear receptor subfamily 6, group A, member 1), a novel
              gene similar to Carassius auratus FTZ-F1, the psmb7 gene
              for proteasome (prosome, macropain) subunit, beta type, 7,
              a novel gene similar to human NEK7 (NIMA (never in mitosis
              gene a)-related kinase 7) and two CpG islands, complete
              sequence
          Length = 162620

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 297    cccaagtcattnaagataccagc 319
              ||||||||||| |||||||||||
Sbjct: 125599 cccaagtcattgaagataccagc 125577

---

>gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171622

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ctggcttcagcttcagctgc 146
             ||||||||||||||||||||
Sbjct: 96939 ctggcttcagcttcagctgc 96958

---

>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    ggcttcagcttcagctgcgt 148
              ||||||||||||||||||||
Sbjct: 145850 ggcttcagcttcagctgcgt 145831

---

>ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 ggcttcagcttcagctgcgt 148
           ||||||||||||||||||||
Sbjct: 290 ggcttcagcttcagctgcgt 271

---

>ref|XM_701677.1| PREDICTED: Danio rerio similar to proteasome (prosome, macropain)
           subunit, beta type, 7, transcript variant 2 (LOC572683),
           mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 297 cccaagtcattnaagataccagc 319
           ||||||||||| |||||||||||
Sbjct: 581 cccaagtcattgaagataccagc 559

---

>ref|XM_677810.1| PREDICTED: Danio rerio similar to proteasome (prosome, macropain)
           subunit, beta type, 7, transcript variant 1 (LOC572683),
           mRNA
          Length = 979

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 297 cccaagtcattnaagataccagc 319
           ||||||||||| |||||||||||
Sbjct: 653 cccaagtcattgaagataccagc 631

---

>gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, region 21E-21F, BAC clone
             BACR30G21, complete sequence
          Length = 168370

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctctggcttcagcttcagct 144
             ||||||||||||||||||||
Sbjct: 36068 ctctggcttcagcttcagct 36049

---

>gb|AC155845.3| Mus musculus 6 BAC RP24-399D24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 145877

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    aacaagagcagcactgacat 522
              ||||||||||||||||||||
Sbjct: 104202 aacaagagcagcactgacat 104221

---

>gb|BC092728.1| Danio rerio proteasome (prosome, macropain) subunit, beta type, 7,
           mRNA (cDNA clone MGC:110090 IMAGE:7283805), complete cds
          Length = 969

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 297 cccaagtcattnaagataccagc 319
           ||||||||||| |||||||||||
Sbjct: 638 cccaagtcattgaagataccagc 616

---

>emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF, gvpG and gvpH genes
          Length = 5110

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  tgagaaaaaagaagaaatgg 48
           ||||||||||||||||||||
Sbjct: 439 tgagaaaaaagaagaaatgg 458

---

>gb|AY104327.1| Zea mays PCO078604 mRNA sequence
          Length = 1960

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  tccattgcatcaccatcagc 121
            ||||||||||||||||||||
Sbjct: 1469 tccattgcatcaccatcagc 1450

---

>gb|AF155581.1|AF155581 Danio rerio proteasome subunit beta 7 (PSMB7) mRNA, partial cds
          Length = 962

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 297 cccaagtcattnaagataccagc 319
           ||||||||||| |||||||||||
Sbjct: 626 cccaagtcattgaagataccagc 604

---

>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17, complete
              sequence
          Length = 232846

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     cactgagaaaaaagaagaaatggc 49
              |||||||||| |||||||||||||
Sbjct: 152867 cactgagaaataagaagaaatggc 152890

---

>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the complete
             sequence
          Length = 308447

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctctggcttcagcttcagct 144
             ||||||||||||||||||||
Sbjct: 73191 ctctggcttcagcttcagct 73172

---

>gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60 of 83 of the complete
              sequence
          Length = 196398

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    ctggcttcagcttcagctgc 146
              ||||||||||||||||||||
Sbjct: 107603 ctggcttcagcttcagctgc 107622

---

>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
             sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   ggcttcagcttcagctgcgt 148
             ||||||||||||||||||||
Sbjct: 32540 ggcttcagcttcagctgcgt 32521

---

>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone
            DS04710, complete sequence
          Length = 72327

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 129  ggcttcagcttcagctgcgt 148
            ||||||||||||||||||||
Sbjct: 4064 ggcttcagcttcagctgcgt 4045

---

>gb|AF064601.1|AF064601 Xenopus laevis homeobox protein (Vax1) mRNA, complete cds
          Length = 888

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 496 cgccaagaacaagagcagca 515
           ||||||||||||||||||||
Sbjct: 171 cgccaagaacaagagcagca 190

---

>gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138)) DNA sequence, complete
             sequence
          Length = 79454

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ctctggcttcagcttcagct 144
             ||||||||||||||||||||
Sbjct: 40545 ctctggcttcagcttcagct 40526

---

>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence
          Length = 205543

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    catcagctacctctggcttcagct 138
              ||||||||||||||||| ||||||
Sbjct: 183500 catcagctacctctggcatcagct 183523

---

>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence
          Length = 224088

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    ctgttctagaacaagcactgagaa 34
             |||||||||||||| |||||||||
Sbjct: 67173 ctgttctagaacaatcactgagaa 67150


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,610,273
Number of Sequences: 3902068
Number of extensions: 5610273
Number of successful extensions: 120425
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120126
Number of HSP's gapped (non-prelim): 298
length of query: 582
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 559
effective length of database: 17,143,297,704
effective search space: 9583103416536
effective search space used: 9583103416536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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