Clone Name | rbasd19i10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-) | 32 | 1.2 | 2 | VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (... | 31 | 2.7 | 3 | PANB_BACSU (P52996) 3-methyl-2-oxobutanoate hydroxymethyltransfe... | 31 | 3.5 | 4 | RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor (Germin-like pr... | 30 | 7.9 |
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>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)| Length = 576 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/36 (50%), Positives = 20/36 (55%) Frame = +3 Query: 123 STLLTSRETNLHSRRKSGAKVFADHLSLSLPVMLSS 230 STL T + NLHSR S F H SLS P +SS Sbjct: 7 STLSTVTDANLHSRFHSRLVPFTHHFSLSQPKRISS 42
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Frame = +3 Query: 57 SSAISKEHMLQKAETKNWQGNKSTLLTSRETNLHSRRKSGAKVFADHLSLSLPVMLSSAW 236 SS+ S H + + G+ S+ +SR + HS + D S S +LS W Sbjct: 1262 SSSKSSSHHSHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKIW 1321 Query: 237 A*LRSCSMKLEHLMRQELAEA*KGGERHLSR--AQRSEH 347 + RQE + G+R SR + RS H Sbjct: 1322 GRHEIYQYRFRSAHRQEFPKRKLPGDRATSRYSSTRSSH 1360
>PANB_BACSU (P52996) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC| 2.1.2.11) (Ketopantoate hydroxymethyltransferase) Length = 277 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = -1 Query: 510 TIGALVTSFSHEVGSLNPGTPQALLQSCATFAAFSCIMEGLNKQQAAMAHTLGGNALTFA 331 T+G V H ++ G P + + F ++ E K AA+ G +AL Sbjct: 55 TVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAAAIVQESGADALKLE 114 Query: 330 HGKG 319 G+G Sbjct: 115 GGEG 118
>RHRE_PEA (Q9S8P4) Rhicadhesin receptor precursor (Germin-like protein)| Length = 217 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = -1 Query: 441 LLQSCATFAAFSCIMEGLNKQQAAMAHTLGGNALTFAHGKGGVLPPFTLP 292 L++ AT F ++ G N Q+ +TLG + + GG+ PP T P Sbjct: 61 LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHP 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,790,110 Number of Sequences: 219361 Number of extensions: 1891245 Number of successful extensions: 4922 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4796 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4921 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)