Clone Name | rbasd19i09 |
---|---|
Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 965 bits (487), Expect = 0.0 Identities = 518/527 (98%), Gaps = 1/527 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaa 59 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 645 tggaacttttatattaagccaagggtataaatagattcatcgtgggttctcttattggaa 586 Query: 60 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggt 526 Query: 120 atcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaaga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 atcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaaga 466 Query: 180 aggcatgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacat 239 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 465 aggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacat 406 Query: 240 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatg 346 Query: 300 ttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccg 359 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 345 ttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccg 286 Query: 360 gattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttatgatt 419 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 285 gattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgatt 226 Query: 420 ttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttg 479 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 225 ttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttg 166 Query: 480 tagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 165 tagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 934 bits (471), Expect = 0.0 Identities = 492/499 (98%) Strand = Plus / Minus Query: 28 aaatagattcatcgtggtaactcttattggaacgagggaaaaaacagaaatacataacta 87 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485 Query: 88 agatgatacatttgcttcgatctggtgatggtatcaagattgttgaacagaaaatgacaa 147 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 484 agatgatacatttgcttcgatgtggtgatggtatcaagattgttgaacagaaaatgacaa 425 Query: 148 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaa 207 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 424 aacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactgaa 365 Query: 208 tgacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatt 267 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatt 305 Query: 268 tcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 tcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaa 245 Query: 328 ttgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ttgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggat 185 Query: 388 agtccctaggacatgttgggctgcttatgattttacaaccacaagcagttgcgcagactg 447 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 184 agtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactg 125 Query: 448 gtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgc 507 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgc 65 Query: 508 agcaactcttgccttctac 526 ||||||||||||||||||| Sbjct: 64 agcaactcttgccttctac 46
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 910 bits (459), Expect = 0.0 Identities = 474/479 (98%) Strand = Plus / Minus Query: 48 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 108 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaa 478 Query: 168 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattacag 227 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacag 418 Query: 228 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaa 358 Query: 288 acattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgca 347 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 357 acattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgca 298 Query: 348 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 tttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttggg 238 Query: 408 ctgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaa 467 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 237 ccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaa 178 Query: 468 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 177 cggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 892 bits (450), Expect = 0.0 Identities = 478/486 (98%), Gaps = 1/486 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaa 59 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| Sbjct: 486 tggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaa 427 Query: 60 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgatctggtgatggt 367 Query: 120 atcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaaga 179 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 366 atcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaaga 307 Query: 180 aggcatgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacat 239 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 306 aggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacat 247 Query: 240 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 246 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccagg 187 Query: 300 ttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccg 127 Query: 360 gattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttatgatt 419 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 126 gattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgatt 67 Query: 420 ttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 ttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttg 7 Query: 480 tagcag 485 |||||| Sbjct: 6 tagcag 1
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 797 bits (402), Expect = 0.0 Identities = 417/422 (98%) Strand = Plus / Minus Query: 105 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 165 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 224 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 225 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 285 gaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtc 344 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 345 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 405 gggctgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 464 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 465 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 525 ac 526 || Sbjct: 120 ac 119
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 656 bits (331), Expect = 0.0 Identities = 337/339 (99%) Strand = Plus / Minus Query: 188 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 248 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 308 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 368 gagaagattcagcttaggatagtccctaggacatgttgggctgcttatgattttacaacc 427 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 428 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 487 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 488 tctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctac 76
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 595 bits (300), Expect = e-167 Identities = 465/516 (90%), Gaps = 3/516 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaa 59 ||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||| Sbjct: 627 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaa 568 Query: 60 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 118 | ||||||||| ||||||| ||||| ||||||||||||||| ||||||| | | |||||| Sbjct: 567 caagggaaaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatgg 509 Query: 119 tatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaag 178 |||||||||| || || | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 508 tatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaag 449 Query: 179 aaggcatgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcaca 238 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 448 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcaca 389 Query: 239 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccat 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 388 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccat 329 Query: 299 gttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcacc 358 |||||||||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 328 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 269 Query: 359 ggattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttatgat 418 |||||||||||||||||| || ||||||||||| ||||| ||| |||| | |||||||| Sbjct: 268 ggattcagggagaagattaagtttaggatagtcactagggcattttggaccacttatgat 209 Query: 419 tttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgtt 478 |||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | ||| Sbjct: 208 tttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgtt 149 Query: 479 gtagcagtttctgcccgtcgtgttcttgcagcaact 514 |||||||||||| | ||||| |||||||||||| Sbjct: 148 gtagcagtttctagctaacgtgtccttgcagcaact 113
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 579 bits (292), Expect = e-162 Identities = 463/516 (89%), Gaps = 3/516 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaa 59 ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct: 620 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaa 561 Query: 60 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 118 | ||||||||| | |||||||||| |||||||||||||| ||||| || | | |||||| Sbjct: 560 caagggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatgg 502 Query: 119 tatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaag 178 |||||||||| || || | |||||||||| |||||| |||||||||||||||||| |||| Sbjct: 501 tatcaagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaag 442 Query: 179 aaggcatgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcaca 238 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 441 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 382 Query: 239 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccat 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 381 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccat 322 Query: 299 gttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcacc 358 |||||||||||| ||| ||||||||||||| |||||||||| || ||| ||||||||| Sbjct: 321 gttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcacc 262 Query: 359 ggattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttatgat 418 ||||||||||||||||||||| ||||||||||| ||||| ||| |||| | |||||||| Sbjct: 261 ggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgat 202 Query: 419 tttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgtt 478 |||||||| ||||||| |||||||||||| ||||||||||| |||||| |||| | ||| Sbjct: 201 tttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagtgtt 142 Query: 479 gtagcagtttctgcccgtcgtgttcttgcagcaact 514 |||||||||||| | ||||| |||||||||||| Sbjct: 141 gtagcagtttctagctaacgtgtccttgcagcaact 106
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 502 bits (253), Expect = e-139 Identities = 397/441 (90%), Gaps = 3/441 (0%) Strand = Plus / Minus Query: 8 tttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaacgaggga 66 |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 67 aaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaag 125 |||| ||||||| ||||| ||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 380 aaaa-cagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaag 322 Query: 126 attgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcat 185 ||| || || | |||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 321 attattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcat 262 Query: 186 gattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttg 245 ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 261 gattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttg 202 Query: 246 ctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtca 305 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 201 ctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtca 142 Query: 306 cagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattca 365 ||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 141 cagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattca 82 Query: 366 gggagaagattcagcttaggatagtccctaggacatgttgggctgcttatgattttacaa 425 ||||||||||| || ||||||||||| ||||| ||| |||| | ||||||||||||||| Sbjct: 81 gggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaa 22 Query: 426 ccacaagcagttgcgcagact 446 | ||||||| |||||||||| Sbjct: 21 cgacaagcacctgcgcagact 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 363 bits (183), Expect = 4e-97 Identities = 267/291 (91%), Gaps = 3/291 (1%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtataaatagattcatcgtggtaactcttattggaa 59 ||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| Sbjct: 2320 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaa 2261 Query: 60 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 118 | ||||||||| | |||||||||| |||||||||||||| ||||| || | | |||||| Sbjct: 2260 caagggaaaaag-acaaatacataagtaagatgatacattggcttccatacagctgatgg 2202 Query: 119 tatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaag 178 |||||||||| || || | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 2201 tatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaag 2142 Query: 179 aaggcatgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcaca 238 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2141 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 2082 Query: 239 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 289 |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2081 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 157 bits (79), Expect = 4e-35 Identities = 139/159 (87%) Strand = Plus / Minus Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttat 415 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| | ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaact 514 ||||||||||||||| | ||||| |||||||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaact 1618 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 289 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 348 |||||||||||||||||||||| ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 349 ttggttcacc 358 ||||||||| Sbjct: 1877 ctggttcacc 1868
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 349 bits (176), Expect = 6e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 106 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 166 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 225 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 226 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 285 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 286 aaac 289 |||| Sbjct: 2057 aaac 2054 Score = 323 bits (163), Expect = 3e-85 Identities = 169/171 (98%) Strand = Plus / Minus Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttat 415 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 1627 Score = 123 bits (62), Expect = 6e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 289 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 348 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 349 ttggttcacc 358 |||||||||| Sbjct: 1903 ttggttcacc 1894
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 155 bits (78), Expect = 2e-34 Identities = 275/340 (80%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 151 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 210 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 211 catcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 270 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 271 tctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattg 330 ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 331 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 390 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 391 ccctaggacatgttgggctgcttatgattttacaaccacaagcagttgcgcagactggtc 450 | |||||||||| | | || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 451 gggaaccaccggcgaaacggcaggcgttgtagcagtttct 490 ||||| ||||| ||||||||| |||| ||||||||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttct 160
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 117 bits (59), Expect = 4e-23 Identities = 188/231 (81%) Strand = Plus / Minus Query: 297 atgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 356 ||||||||||| ||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 357 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggctgcttatg 416 ||| |||||| |||||||| | | ||||| | || || ||||| |||| | || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 417 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 476 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 477 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacc 527 |||||||||||| | |||||||| ||||||||||||||||||| |||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacc 156 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 140 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 199 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 200 agactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 259 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 260 gtcgaatttcatctcttggccacg 283 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 33 gattcatcgtggtaactcttattggaacgagggaaaa 69 ||||||||||| ||||||||||| ||| || |||||| Sbjct: 671 gattcatcgtgataactcttatttgaatgatggaaaa 635
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 475 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 |||||||||||||||| |||| |||| ||||||||||||||| || ||||| Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctac 98
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctac 82
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| ||| ||| || |||||||||||||||||||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctac 139
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| ||| ||| || |||||||||||||||||||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctac 82
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctac 90
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| ||| ||| || |||||||||||||||||||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctac 127
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacc 527 ||||||||||||||| ||| ||| || ||||||| ||||||||||||||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacc 81
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacc 527 ||||||||||||||| ||| ||| || ||||||| ||||||||||||||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacc 40
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| || ||| |||||||||||||||| |||||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| || ||| || |||||||||||||||||||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctac 57
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctac 526 ||||||||||||||| || ||| || |||||||||||||||||||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctac 435
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 505 tgcagcaactcttgccttctac 526 |||||||||||||||||||||| Sbjct: 127 tgcagcaactcttgccttctac 106
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence Length = 58609 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 aaaaaacagaaatacataact 86 ||||||||||||||||||||| Sbjct: 8230 aaaaaacagaaatacataact 8210
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 207 atgacatcaccatcattacagaaac 231 |||||||||||||||||||| |||| Sbjct: 27486 atgacatcaccatcattacataaac 27462
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 atgacatcaccatcattacagaaac 231 |||||||||||||||||||| |||| Sbjct: 188699 atgacatcaccatcattacataaac 188723
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 caagattgttgaacagaaaat 142 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 caagattgttgaacagaaaat 142 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 cgtgttcttgcagcaactct 516 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atgacatcaccatcattaca 226 |||||||||||||||||||| Sbjct: 32100 atgacatcaccatcattaca 32119
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 cgtgttcttgcagcaactct 516 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaatacataactaagatgat 94 |||||||||||||||||||| Sbjct: 70952 aaatacataactaagatgat 70971
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaatacataactaagatgat 94 |||||||||||||||||||| Sbjct: 645 aaatacataactaagatgat 664
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aactaagatgatacatttgc 102 |||||||||||||||||||| Sbjct: 96493 aactaagatgatacatttgc 96512
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aagattgttgaacagaaaat 142 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atgacatcaccatcattaca 226 |||||||||||||||||||| Sbjct: 52069 atgacatcaccatcattaca 52050
>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116556 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cagactgaatgacatcacca 218 |||||||||||||||||||| Sbjct: 64821 cagactgaatgacatcacca 64802
>gb|AC084654.1|CBRG45O23 Caenorhabditis briggsae cosmid G45O23, complete sequence Length = 34686 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 acagaaatacataactaaga 90 |||||||||||||||||||| Sbjct: 19747 acagaaatacataactaaga 19766
>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein (vis1) gene, complete cds Length = 2257 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 actcttattggaacgagggaaaaa 70 |||||||||||||||| ||||||| Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein (vis1) gene, complete cds Length = 2224 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 actcttattggaacgagggaaaaa 70 |||||||||||||||| ||||||| Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence Length = 217898 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaaaacagaaatacataac 85 |||||||||||||||||||| Sbjct: 161134 aaaaaacagaaatacataac 161153
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atgacatcaccatcattaca 226 |||||||||||||||||||| Sbjct: 34723 atgacatcaccatcattaca 34704
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aactaagatgatacatttgc 102 |||||||||||||||||||| Sbjct: 32396 aactaagatgatacatttgc 32377
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 aaaaaacagaaatacataac 85 |||||||||||||||||||| Sbjct: 101064 aaaaaacagaaatacataac 101083
>dbj|AP006644.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06I23, TM0253, complete sequence Length = 85813 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 agcaactcttgccttctacc 527 |||||||||||||||||||| Sbjct: 41430 agcaactcttgccttctacc 41411
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ccttggccatagaaatcatgccca 176 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 aagattgttgaacagaaaat 142 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,539,491 Number of Sequences: 3902068 Number of extensions: 4539491 Number of successful extensions: 85879 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85746 Number of HSP's gapped (non-prelim): 113 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)