Clone Information

BLAST Search Result

Clone Name	rbasd19i07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)	41	0.002
2	WDR26_MOUSE (Q8C6G8) WD-repeat protein 26	39	0.009
3	WDR26_HUMAN (Q9H7D7) WD-repeat protein 26	39	0.009
4	APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)	38	0.019
5	SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/...	38	0.025
6	APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)	37	0.055
7	STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)	37	0.055
8	ELP2_YEAST (P42935) Elongator complex protein 2 (Gamma-toxin tar...	36	0.072
9	YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4	36	0.094
10	TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associ...	35	0.12
11	TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associ...	35	0.12
12	SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein cl...	35	0.21
13	YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4	35	0.21
14	UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated ...	34	0.27
15	PRP19_CAEEL (Q10051) PRP19/PSO4 homolog	34	0.27
16	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	34	0.27
17	APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)	34	0.27
18	YKU5_SCHPO (Q9P7C0) WD-repeat protein C2E1P5.05 in chromosome I	33	0.47
19	VILD_DICDI (Q8WQ85) Villidin	33	0.47
20	PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	33	0.61
21	PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	33	0.61
22	PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homol...	33	0.61
23	PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	33	0.61
24	PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	33	0.61
25	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.80
26	TAF73_SCHPO (O74319) Transcription initiation factor TFIID subun...	33	0.80
27	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	1.0
28	SCAP_CRIGR (P97260) Sterol regulatory element-binding protein cl...	32	1.0
29	UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 1...	32	1.0
30	YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466	32	1.0
31	STTP1_HUMAN (Q6IA86) Stat3-interacting protein (StIP1) (SHINC-2)	32	1.0
32	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	32	1.4
33	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	32	1.4
34	TUP11_SCHPO (Q09715) Transcriptional repressor tup11	32	1.4
35	PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	32	1.4
36	YTM1_YEAST (Q12024) Microtubule-associated protein YTM1	32	1.8
37	PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	32	1.8
38	LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige prote...	31	2.3
39	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	31	2.3
40	HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (...	31	2.3
41	GEMI5_MOUSE (Q8BX17) Gem-associated protein 5 (Gemin5)	31	2.3
42	GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)	31	2.3
43	LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)	31	2.3
44	WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)	31	3.0
45	COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat...	31	3.0
46	ESC_DROME (Q24338) Polycomb protein esc (Protein extra sex combs)	31	3.0
47	GBLP_YEAST (P38011) Guanine nucleotide-binding protein beta subu...	31	3.0
48	APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)	30	4.0
49	MCE1_YARLI (Q6C783) mRNA capping enzyme alpha subunit (mRNA guan...	30	4.0
50	HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (...	30	4.0
51	LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal ce...	30	4.0
52	PRL1_ARATH (Q42384) PP1/PP2A phosphatases pleiotropic regulator ...	30	4.0
53	NLE1_BOVIN (Q58D20) Notchless homolog 1	30	4.0
54	WDR57_PONPY (Q5RF51) WD-repeat protein 57	30	5.2
55	WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein)...	30	5.2
56	YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2	30	5.2
57	FZR_HUMAN (Q9UM11) Fizzy-related protein homolog (Fzr) (Cdh1/Hct...	30	5.2
58	FZR_MOUSE (Q9R1K5) Fizzy-related protein homolog (Fzr) (Cdh1/Hct...	30	5.2
59	PI3R4_RAT (P0C0R5) Phosphoinositide 3-kinase regulatory subunit ...	30	5.2
60	PI3R4_MOUSE (Q8VD65) Phosphoinositide 3-kinase regulatory subuni...	30	5.2
61	PI3R4_HUMAN (Q99570) Phosphoinositide 3-kinase regulatory subuni...	30	5.2
62	HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (...	30	5.2
63	TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni...	30	5.2
64	YIRF_SCHPO (Q9P7I3) Hypothetical WD-repeat protein C664.15 in ch...	30	5.2
65	WDR57_MOUSE (Q6PE01) WD-repeat protein 57	30	5.2
66	TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subuni...	30	5.2
67	WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat p...	30	6.7
68	SPP41_YEAST (P38904) Protein SPP41	30	6.7
69	PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-pr...	30	6.7
70	HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (...	30	6.7
71	FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat...	30	6.7
72	PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog	30	6.7
73	TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-a...	30	6.7
74	WDR46_HUMAN (O15213) WD-repeat protein 46 (WD-repeat protein BING4)	30	6.7
75	TAF5_SCHPO (O13282) Transcription initiation factor TFIID subuni...	29	8.8
76	COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (...	29	8.8
77	PRP46_KLULA (Q6CKE8) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	29	8.8
78	COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein)...	29	8.8
79	COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein)...	29	8.8
80	COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein)...	29	8.8
81	YR061_MIMIV (Q5UPD3) Putative BTB/POZ domain and WD-repeat prote...	29	8.8
82	PLRG1_HUMAN (O43660) Pleiotropic regulator 1	29	8.8
83	KIF6_HUMAN (Q6ZMV9) Kinesin-like protein KIF6	29	8.8

>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)|
          Length = 821

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQDTS------SVKLLATLPQFRESVTALAWTGRDRARNAGIIAVG 419
            F TGSRDK V +W   ++S       +   +++      VTA++           I+AVG
Sbjct: 682  FFTGSRDKKVVVWGECNSSYNPMEHPINPCSSILDVGSCVTAVSVCPVLNPAQRYIVAVG 741

Query: 418  MDNGLIELWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKA 239
            +++G I ++S                      +   P   H   + RL W+    + E++
Sbjct: 742  LESGKICIYSWSKTNQETKDWTS--------CVETTPSQSHTLGIRRLCWKSCSGSTEQS 793

Query: 238  A-----VELASCGADHCVRVFAV 185
                  ++ ASCG DH V+++ V
Sbjct: 794  EEGTEWLDFASCGEDHTVKIYRV 816

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>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26|
          Length = 514

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -2

Query: 583 EFATGSRDKTVKIWCVQ-DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNG 407
           + ATGS+D TV IW V  DT  +KLL TL      V+ +AW+  D    + ++A G D+ 
Sbjct: 222 KLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDD----SYLVACGPDD- 276

Query: 406 LIELW 392
             ELW
Sbjct: 277 CSELW 281

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>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26|
          Length = 514

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 583 EFATGSRDKTVKIWCVQ-DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNG 407
           + ATGS+D TV IW V  DT  +KLL TL      V+ +AW+  D      ++A G D+ 
Sbjct: 222 KLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNY----LVACGPDD- 276

Query: 406 LIELW 392
             ELW
Sbjct: 277 CSELW 281

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>APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1249

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 34/134 (25%), Positives = 58/134 (43%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DK VKIW   D+++ KL+ T  +  E V    +T    + N  ++A G ++  ++
Sbjct: 673 ATCSADKKVKIW---DSATGKLVHTYDEHSEQVNCCHFTN---SSNHLLLATGSNDFFLK 726

Query: 397 LWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKAAVELASC 218
           LW +                        + +  H ++V+  R+   D         LASC
Sbjct: 727 LWDLNQKECR------------------NTMFGHTNSVNHCRFSPDDEL-------LASC 761

Query: 217 GADHCVRVFAVRDS 176
            AD  +R++ VR +
Sbjct: 762 SADGTLRLWDVRSA 775



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -2

Query: 583  EFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGL 404
            +F++ S DKT KIW      S  LL+ L + +     +  +    + +  ++A G DNG 
Sbjct: 1099 KFSSTSADKTAKIW------SFDLLSPLHELKGHNGCVRCSAF--SLDGILLATGDDNGE 1150

Query: 403  IELWSV 386
            I +W+V
Sbjct: 1151 IRIWNV 1156

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>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of|
           lin-12) (Sel-10 protein)
          Length = 587

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 24/93 (25%), Positives = 43/93 (46%)
 Frame = -2

Query: 562 DKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIELWSVX 383
           D  V++W + + + V +L+     R ++T+L W GR+      ++A   D+G ++LW + 
Sbjct: 482 DSHVRVWDIHEGTCVHMLSG---HRSAITSLQWFGRN------MVATSSDDGTVKLWDIE 532

Query: 382 XXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTV 284
                       S  N  C+ R    LC  ST+
Sbjct: 533 RGALIRDLVTLDSGGNGGCIWR----LCSTSTM 561



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           +GS D+TVK+W   D S   LL TL     +V  +A  G        I+  G  +  + +
Sbjct: 313 SGSTDRTVKVWSTVDGS---LLHTLQGHTSTVRCMAMAG-------SILVTGSRDTTLRV 362

Query: 394 WSV 386
           W V
Sbjct: 363 WDV 365

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>APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1249

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 33/134 (24%), Positives = 56/134 (41%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DK VKIW   D+ + KL+ T  +  E V    +T +    N  ++A G ++  ++
Sbjct: 673 ATCSVDKKVKIW---DSGTGKLVHTYEEHSEQVNCCHFTNKS---NHLLLATGSNDSFLK 726

Query: 397 LWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKAAVELASC 218
           LW +                        + +  H ++V   R+   D         LASC
Sbjct: 727 LWDLNQKECR------------------NTMFGHTNSVTHCRFSPDDEL-------LASC 761

Query: 217 GADHCVRVFAVRDS 176
            AD  ++++ VR +
Sbjct: 762 SADGTLKLWDVRSA 775



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -2

Query: 583  EFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGL 404
            +F++ S DKT KIW  +  S    L  L      V   A++      +  ++A G DNG 
Sbjct: 1099 KFSSTSADKTAKIWSFELPSP---LHELKGHNSCVRCSAFS-----LDGILLATGDDNGE 1150

Query: 403  IELWSV 386
            I +W+V
Sbjct: 1151 IRIWNV 1156

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>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)|
          Length = 831

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQDTSS------VKLLATLPQFRESVTALAWTGRDRARNAGIIAVG 419
            F TGSRDK V +W    +S       ++  +++     SVTA++           I+A+G
Sbjct: 684  FFTGSRDKKVVVWGECKSSHNPMEHPIRPCSSILDVGSSVTAVSVCPVLNPAQRYIVAIG 743

Query: 418  MDNGLIELWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQK-------- 263
            +++G I ++S                 N        P   H   + RL W+         
Sbjct: 744  LESGKICIYSWNKTNQEINDWTSCVETN--------PSQSHSLGIRRLCWKSCSDDDDDD 795

Query: 262  PDSAVEKAA-----VELASCGADHCVRVFAV 185
             D   E++      +  ASCG DH V+++ V
Sbjct: 796  DDDDTEQSEEGPEWLHFASCGEDHTVKIYRV 826

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>ELP2_YEAST (P42935) Elongator complex protein 2 (Gamma-toxin target 2)|
          Length = 788

 Score = 36.2 bits (82), Expect = 0.072
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQ-DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGL 404
           F T SRDKTVK+W  Q + +   +L    +  ++VTA++       R   +I+VG++NG 
Sbjct: 670 FVTASRDKTVKVWRHQKEPADDYVLEASIKHTKAVTAIS-IHDSMIREKILISVGLENGE 728

Query: 403 IELWS 389
           I L+S
Sbjct: 729 IYLYS 733

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>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 35.8 bits (81), Expect = 0.094
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           +GS D++V+IW V+    +K   TLP   + V+A+++      R+  +IA G  +GL+ +
Sbjct: 188 SGSFDESVRIWDVKTGMCIK---TLPAHSDPVSAVSFN-----RDGSLIASGSYDGLVRI 239

Query: 394 W 392
           W
Sbjct: 240 W 240

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>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 35/134 (26%), Positives = 59/134 (44%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           ATGS DKTV++W  Q  +SV+L       R  V +L++     + N   +A   ++  ++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFT---GHRGPVLSLSF-----SPNGKYLASAGEDQRLK 493

Query: 397 LWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKAAVELASC 218
           LW                  ++A    F  L  H  ++  L +  PDS +      +AS 
Sbjct: 494 LW------------------DLASGTLFKELRGHTDSITSLAF-SPDSGL------IASA 528

Query: 217 GADHCVRVFAVRDS 176
             D+ VRV+ +R +
Sbjct: 529 SMDNSVRVWDIRST 542

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>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 35/134 (26%), Positives = 59/134 (44%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           ATGS DKTV++W  Q  +SV+L       R  V +LA+     + N   +A   ++  ++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFT---GHRGPVLSLAF-----SPNGKYLASAGEDQRLK 493

Query: 397 LWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKAAVELASC 218
           LW                  ++A    +  L  H   +  L +  PDS +      +AS 
Sbjct: 494 LW------------------DLASGTLYKELRGHTDNITSLTF-SPDSGL------IASA 528

Query: 217 GADHCVRVFAVRDS 176
             D+ VRV+ +R++
Sbjct: 529 SMDNSVRVWDIRNT 542

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>SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1278

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -2

Query: 313  DPLLCHVSTVHRLRWQKPDSAVEKAAVELASCGADHCVRVFAVRDS 176
            D + CH++       QKP +A++ AA  L +   DH +RVF + DS
Sbjct: 1063 DTVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDS 1108

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>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4|
          Length = 395

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 15/62 (24%), Positives = 37/62 (59%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           A+GS D+T++IWC ++ +++    ++P   + V+++ +      R+   +A G  +G++ 
Sbjct: 206 ASGSFDETIRIWCARNGNTI---FSIPGHEDPVSSVCFN-----RDGAYLASGSYDGIVR 257

Query: 397 LW 392
           +W
Sbjct: 258 IW 259

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>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 777

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAW 464
           +GSRDKTV++W ++  S+V+   T+P F  SV A+ W
Sbjct: 206 SGSRDKTVQVWNIKKRSAVR---TIPVF-HSVEAIGW 238



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           A+ S+DKT+K+W   D+S+ +++  L   R  V A ++    R      +A G  +  I 
Sbjct: 481 ASASQDKTIKLW---DSSTGEVVGVLRGHRRGVWACSFNPFSRQ-----LASGSGDRTIR 532

Query: 397 LWSV 386
           +W+V
Sbjct: 533 IWNV 536

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>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog|
          Length = 492

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           F TG+ D  VKIW   D  +  + A  P    +V ++A+     + N   +A G ++G +
Sbjct: 353 FGTGAADAVVKIW---DLKNQTVAAAFPGHTAAVRSIAF-----SENGYYLATGSEDGEV 404

Query: 400 ELWSV 386
           +LW +
Sbjct: 405 KLWDL 409

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 25/62 (40%), Positives = 36/62 (58%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS DKT+KIW   DT+S     TL     SV ++A++  DR R    +A G D+  I+
Sbjct: 857  ASGSDDKTIKIW---DTASGTGTQTLEGHGGSVWSVAFS-PDRER----VASGSDDKTIK 908

Query: 397  LW 392
            +W
Sbjct: 909  IW 910



 Score = 32.7 bits (73), Expect = 0.80
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS DKT+KIW   DT+S     TL     SV ++A++   +      +A G D+  I+
Sbjct: 983  ASGSGDKTIKIW---DTASGTCTQTLEGHGGSVWSVAFSPDGQR-----VASGSDDKTIK 1034

Query: 397  LW 392
            +W
Sbjct: 1035 IW 1036



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS DKT+KIW   DT+S     TL      V ++A++   +      +A G  +  I+
Sbjct: 1193 ASGSSDKTIKIW---DTASGTCTQTLEGHGGWVQSVAFSPDGQR-----VASGSSDNTIK 1244

Query: 397  LW 392
            +W
Sbjct: 1245 IW 1246



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS DKT+KIW   D +S     TL      V ++A++   +      +A G D+  I+
Sbjct: 899  ASGSDDKTIKIW---DAASGTCTQTLEGHGGRVQSVAFSPDGQR-----VASGSDDHTIK 950

Query: 397  LW 392
            +W
Sbjct: 951  IW 952

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>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1261

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
            FAT S ++T K+W    ++S K+L  L   ++ V +  ++  ++      +A G DNG I
Sbjct: 1108 FATTSANRTAKVW---SSASWKMLFLLEGHKDCVRSCRFSWDNKR-----LATGDDNGEI 1159

Query: 400  ELWSV 386
             LWS+
Sbjct: 1160 RLWSM 1164

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>YKU5_SCHPO (Q9P7C0) WD-repeat protein C2E1P5.05 in chromosome I|
          Length = 524

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSV-------KLLATLPQFRESVTALAWTGRDRARNAGIIAVG 419
           + G RD+T ++W + + S +        + AT      SV  +A    D          G
Sbjct: 308 SVGGRDRTSRLWKIVEESQLVFRSGGTSMKATAGYMEGSVDCVAMIDEDH------FVTG 361

Query: 418 MDNGLIELWSV 386
            DNG+I LWSV
Sbjct: 362 SDNGVIALWSV 372

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>VILD_DICDI (Q8WQ85) Villidin|
          Length = 1704

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCVQDTSSVK-----LLATLPQFRESVTAL 470
           Y  ATGSRD T+KIW V +   +K      L TLP+ ++ VT +
Sbjct: 98  YVIATGSRDCTIKIWEVPEEGLIKDNLVTPLITLPKQQKRVTGV 141

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>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)|
          Length = 505

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           F TG+ D  +KIW +++ ++V   A  P     +T++A+     + N   +A   D+  +
Sbjct: 366 FGTGTMDSQIKIWDLKERTNV---ANFPGHSGPITSIAF-----SENGYYLATAADDSSV 417

Query: 400 ELWSV 386
           +LW +
Sbjct: 418 KLWDL 422

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>PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 427

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGR 455
           FATGS DKT+KIW   + +S KL  TL     +V  LA + R
Sbjct: 131 FATGSNDKTIKIW---NLASGKLKVTLKAHDMTVRDLAISNR 169

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>PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Neuronal|
           differentiation-related gene protein)
          Length = 504

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           F TG+ D  +KIW +++ ++V   A  P     +T++A+     + N   +A   D+  +
Sbjct: 365 FGTGTMDSQIKIWDLKERTNV---ANFPGHSGPITSIAF-----SENGYYLATAADDSSV 416

Query: 400 ELWSV 386
           +LW +
Sbjct: 417 KLWDL 421

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>PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (Nuclear matrix protein SNEV)
          Length = 504

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           F TG+ D  +KIW +++ ++V   A  P     +T++A+     + N   +A   D+  +
Sbjct: 365 FGTGTMDSQIKIWDLKERTNV---ANFPGHSGPITSIAF-----SENGYYLATAADDSSV 416

Query: 400 ELWSV 386
           +LW +
Sbjct: 417 KLWDL 421

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>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (hPso4)
          Length = 504

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           F TG+ D  +KIW +++ ++V   A  P     +T++A+     + N   +A   D+  +
Sbjct: 365 FGTGTMDSQIKIWDLKERTNV---ANFPGHSGPITSIAF-----SENGYYLATAADDSSV 416

Query: 400 ELWSV 386
           +LW +
Sbjct: 417 KLWDL 421

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 16/63 (25%), Positives = 30/63 (47%)
 Frame = -2

Query: 574  TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
            +G+ D TVK+W +     ++ L+   +   +VT L +  R        +    D+G ++L
Sbjct: 1210 SGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR-------FVVTSSDDGTVKL 1262

Query: 394  WSV 386
            W V
Sbjct: 1263 WDV 1265

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>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73|
           (Transcription initiation factor TFIID 73 kDa subunit)
           (TAFII-73)
          Length = 642

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 20/88 (22%), Positives = 37/88 (42%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNG 407
           Y FAT S D+T ++W V+  + +++       +  V  +++       NA  +A G  + 
Sbjct: 458 YYFATASHDQTARLWDVEHAAPLRVFV---GHQNDVDCVSF-----HPNAAYLATGSSDH 509

Query: 406 LIELWSVXXXXXXXXXXXXXSPLNVACM 323
              +W V             SP++  CM
Sbjct: 510 TTRMWDVRTGGTVRVFNAHHSPVSALCM 537

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>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           +G+ D TVKIW ++    ++ L    + + +VT L +       N   +    D+G ++L
Sbjct: 518 SGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF-------NKNFVITSSDDGTVKL 570

Query: 394 WSV 386
           W +
Sbjct: 571 WDL 573

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>SCAP_CRIGR (P97260) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1276

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -2

Query: 301  CHVSTVHRLRWQKPDSAVEKAAVELASCGADHCVRVFAVRDS 176
            CH++       QKP +A+  AA  L +   DH +RVF + DS
Sbjct: 1065 CHLTHTVPCAHQKPITALRAAAGRLVTGSQDHTLRVFRLEDS 1106

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>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 817

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 24/62 (38%), Positives = 35/62 (56%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DKTVKIW + DT SV  + TL     +V   ++  + +     +I+ G D GLI+
Sbjct: 549 ATSSGDKTVKIWSL-DTFSV--MKTLEGHTNAVQRCSFINKQKQ----LISCGAD-GLIK 600

Query: 397 LW 392
           +W
Sbjct: 601 IW 602



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/65 (27%), Positives = 35/65 (53%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           FAT S DKT KIW +++    +L ATL   +  +  +++   D+     ++A    +  +
Sbjct: 506 FATASYDKTCKIWNLENG---ELEATLANHKRGLWDVSFCQYDK-----LLATSSGDKTV 557

Query: 400 ELWSV 386
           ++WS+
Sbjct: 558 KIWSL 562

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>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466|
          Length = 1526

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 38/153 (24%), Positives = 61/153 (39%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS DKTV++W   D SS K L T       V ++A+       +  ++A G  +  + 
Sbjct: 1258 ASGSSDKTVRLW---DISSSKCLHTFQGHTNWVNSVAFN-----PDGSMLASGSGDQTVR 1309

Query: 397  LWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKAAVELASC 218
            LW +                   C+  F     H S V  + +  PD  +      LAS 
Sbjct: 1310 LWEISSS---------------KCLHTFQG---HTSWVSSVTF-SPDGTM------LASG 1344

Query: 217  GADHCVRVFAVRDS*GIYATL*LRNFEHPHLFS 119
              D  VR++++     +Y  L   N+    +FS
Sbjct: 1345 SDDQTVRLWSISSGECLYTFLGHTNWVGSVIFS 1377



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+GS D+TV++W +   SS K L TL      V ++ +     + +  ++A G D+  + 
Sbjct: 1384 ASGSGDQTVRLWSI---SSGKCLYTLQGHNNWVGSIVF-----SPDGTLLASGSDDQTVR 1435

Query: 397  LWSV 386
            LW++
Sbjct: 1436 LWNI 1439

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>STTP1_HUMAN (Q6IA86) Stat3-interacting protein (StIP1) (SHINC-2)|
          Length = 826

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 12/144 (8%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQDTS------SVKLLATLPQFRESVTALAWTGRDRARNAGIIAVG 419
            F TGSRDK V +W   D++      ++   +++     +VTA++           ++AVG
Sbjct: 684  FFTGSRDKKVVVWGECDSTDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVAVG 743

Query: 418  MDNGLIELWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDSAVEKA 239
            ++ G I L++                +  +          H   + +L W+      E+ 
Sbjct: 744  LECGKICLYTWKKTDQVPEINDWTHCVETS------QSQSHTLAIRKLCWKNCSGKTEQK 797

Query: 238  AVE------LASCGADHCVRVFAV 185
              E       ASCG DH V++  V
Sbjct: 798  EAEGAEWLHFASCGEDHTVKIHRV 821

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>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           +G+ D TVKIW ++    ++ L    + + +VT L +       N   +    D+G ++L
Sbjct: 596 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-------NKNFVITSSDDGTVKL 648

Query: 394 WSV 386
           W +
Sbjct: 649 WDL 651

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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A GS DKTVK+W  QD    KLL TL   ++ V +L+++   +      +A    +  I+
Sbjct: 1213 AAGSEDKTVKLWHRQDG---KLLKTLNGHQDWVNSLSFSPDGKT-----LASASADKTIK 1264

Query: 397  LWSV 386
            LW +
Sbjct: 1265 LWRI 1268



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
            A+ S DKT+K+W + D    KL+ TL    +SV    W     +    I +   DN  I+
Sbjct: 1255 ASASADKTIKLWRIADG---KLVKTLKGHNDSV----WDVNFSSDGKAIASASRDN-TIK 1306

Query: 397  LWS 389
            LW+
Sbjct: 1307 LWN 1309



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESV 479
            A+ S DKTVKIW +       LL TLPQ +  V
Sbjct: 1588 ASASEDKTVKIWQIDG----HLLTTLPQHQAGV 1616

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>TUP11_SCHPO (Q09715) Transcriptional repressor tup11|
          Length = 614

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTG 458
           +GS DKT+K+W +Q T SV L A  P   E +    +TG
Sbjct: 501 SGSLDKTIKVWELQATRSVGLSAIKP---EGICKATYTG 536

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>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 472

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGR 455
           FATGS DKT+KIW   D ++ KL  TL      V AL  + R
Sbjct: 178 FATGSADKTIKIW---DLATGKLRLTLTGHIMGVRALGVSPR 216

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>YTM1_YEAST (Q12024) Microtubule-associated protein YTM1|
          Length = 460

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCVQDTSSVKLL-----ATLPQFRESVTALAWTGRDRARNAGIIAV 422
           Y   +GS D TVK+W V+ TS +  +     +      + V A+ W     A   GII+ 
Sbjct: 389 YILCSGSHDGTVKVWDVRSTSPMYTITREDKSVQKGVNDKVFAVKW-----AEKVGIISA 443

Query: 421 GMD 413
           G D
Sbjct: 444 GQD 446

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>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 417

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGR 455
           F TGS D T+KIW   D +S+ L AT+      V +LA + R
Sbjct: 137 FVTGSSDSTIKIW---DLASLNLKATITGHIMGVRSLAVSSR 175

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>LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige protein) (CHS1|
            homolog)
          Length = 3788

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -2

Query: 490  RESVTALAWTGRDRARNAGIIAVGMDNGLIELWS 389
            RE + ++A++ +    +  +IA G++NG++ LWS
Sbjct: 3689 REIICSVAFSNQPEGVSINVIAGGLENGIVRLWS 3722

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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWT 461
            ATGS D TVK+W   + S+ + L TL +  + +  +AW+
Sbjct: 1036 ATGSADCTVKLW---NISTGQCLKTLSEHSDKILGMAWS 1071

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>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 423

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DKT+ IW +++    + + TL    ++VT+LAW        AGI+     +  I 
Sbjct: 290 ATASADKTIGIWDLRNVK--EKVHTLEGHNDAVTSLAW----HPTEAGILGSASYDRRII 343

Query: 397 LWSV 386
            W +
Sbjct: 344 FWDL 347

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>GEMI5_MOUSE (Q8BX17) Gem-associated protein 5 (Gemin5)|
          Length = 1502

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = -2

Query: 568 SRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIELWS 389
           S D+ VK W   D ++++   TLP       +LA++  D     G +A+G+ +G+I +W+
Sbjct: 356 SMDRDVKCW---DMATLECCWTLPSLGGFAYSLAFSPVD----VGSLAIGVGDGMIRVWN 408

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>GEMI5_HUMAN (Q8TEQ6) Gem-associated protein 5 (Gemin5)|
          Length = 1508

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = -2

Query: 568 SRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIELWS 389
           S D+ VK W   D ++++   TLP       +LA++  D     G +A+G+ +G+I +W+
Sbjct: 356 SMDRDVKCW---DIATLECSWTLPSLGGFAYSLAFSSVD----IGSLAIGVGDGMIRVWN 408

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>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)|
          Length = 3801

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -2

Query: 490  RESVTALAWTGRDRARNAGIIAVGMDNGLIELWS 389
            RE + ++A++ +    +  +IA G++NG++ LWS
Sbjct: 3702 REIICSVAFSNQPEGVSINVIAGGLENGIVRLWS 3735

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>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)|
          Length = 1273

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           A  S D ++++W +    S K +A+L Q       L W+      N  IIA  +DNG +E
Sbjct: 34  ANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWS-----HNNKIIAGALDNGSLE 87

Query: 397 LWS 389
           L+S
Sbjct: 88  LYS 90

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>COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 796

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 22/58 (37%), Positives = 28/58 (48%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           +GS D TVKIW     S +K       +  S+   AW       N G++ VG DNGLI
Sbjct: 245 SGSEDGTVKIWHTLSYSLIK------SYNFSLDR-AWCIAQNKDN-GLVTVGFDNGLI 294

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>ESC_DROME (Q24338) Polycomb protein esc (Protein extra sex combs)|
          Length = 425

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           +GS+D  +++W +Q    + +L  +   R+ V ++ +      R   I++ GMD+ L +L
Sbjct: 188 SGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDF----NMRGDRIVSSGMDHSL-KL 242

Query: 394 W 392
           W
Sbjct: 243 W 243

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>GBLP_YEAST (P38011) Guanine nucleotide-binding protein beta subunit-like|
           protein (Receptor of activated protein kinase C 1)
           (RACK1) (Receptor for activated C kinase)
          Length = 318

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNG-LIE 398
           +GSRDKT+K+W ++     + LATL    + V+ +     ++A +  +  +   N  +++
Sbjct: 123 SGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 178

Query: 397 LWSV 386
            W++
Sbjct: 179 AWNL 182

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>APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1248

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = -2

Query: 583  EFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGL 404
            +F++ S DKT KIW      S  LL  L + R     +  +    + ++ ++A G DNG 
Sbjct: 1099 KFSSTSADKTAKIW------SFDLLLPLHELRGHNGCVRCSAF--SVDSTLLATGDDNGE 1150

Query: 403  IELWSV 386
            I +W+V
Sbjct: 1151 IRIWNV 1156

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>MCE1_YARLI (Q6C783) mRNA capping enzyme alpha subunit (mRNA|
           guanylyltransferase) (EC 2.7.7.50) (GTP--RNA
           guanylyltransferase) (GTase)
          Length = 391

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 15/66 (22%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCVQDTSSVKLLATL--PQFRES-------------VTALAWTGRD 452
           + + +G+ ++ +K W  QD +SV  L T+  P F ++             +T L WTGRD
Sbjct: 219 HPYVSGTDERILK-WKKQDENSVDFLMTMKFPIFEDTNGESWTDYDAKPEITLLVWTGRD 277

Query: 451 RARNAG 434
            +R  G
Sbjct: 278 GSRPYG 283

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>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAW 464
           ATGS DKT+ +W +++  +   L +L    +SVT+++W
Sbjct: 303 ATGSADKTIGLWDLRNLKT--KLHSLESHTDSVTSISW 338

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>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage|
           protein 23)
          Length = 665

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           + S D+T+K+W +    +++ + TL   R  +  L + GR       ++  G  +  I L
Sbjct: 360 SASGDRTIKVWSM---DTLEFVRTLAGHRRGIACLQYRGR-------LVVSGSSDNTIRL 409

Query: 394 WSV 386
           W +
Sbjct: 410 WDI 412

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>PRL1_ARATH (Q42384) PP1/PP2A phosphatases pleiotropic regulator PRL1|
          Length = 486

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGR 455
           F TGS D+T+KIW   D ++  L  TL    E V  LA + R
Sbjct: 191 FCTGSADRTIKIW---DVATGVLKLTLTGHIEQVRGLAVSNR 229

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>NLE1_BOVIN (Q58D20) Notchless homolog 1|
          Length = 485

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           A+ S+D +V++W   DT++ +   TL    +SVT L W G       G++     +  I+
Sbjct: 220 ASSSKDGSVRVW---DTTAGRCERTLTGHAQSVTCLRWGG------DGLLYSASQDRTIK 270

Query: 397 LW 392
           +W
Sbjct: 271 VW 272

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>WDR57_PONPY (Q5RF51) WD-repeat protein 57|
          Length = 357

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           TGS D TVK+W       ++  A +  F+ +   LA T  D +    II+ G+DN  I++
Sbjct: 169 TGSDDGTVKLW------DIRKKAAIQTFQNTYQVLAVTFNDTSDQ--IISGGIDND-IKV 219

Query: 394 WSV 386
           W +
Sbjct: 220 WDL 222



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           + S DKTV +W  +    VK L     F  S     +  R   R   ++  G D+G ++L
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNS----CYPAR---RGPQLVCTGSDDGTVKL 178

Query: 394 WSV 386
           W +
Sbjct: 179 WDI 181

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>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5|
           snRNP-specific 40 kDa protein) (38 kDa splicing factor)
          Length = 357

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           TGS D TVK+W       ++  A +  F+ +   LA T  D +    II+ G+DN  I++
Sbjct: 169 TGSDDGTVKLW------DIRKKAAIQTFQNTYQVLAVTFNDTSDQ--IISGGIDND-IKV 219

Query: 394 WSV 386
           W +
Sbjct: 220 WDL 222



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           + S DKTV +W  +    VK L     F  S     +  R   R   ++  G D+G ++L
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNS----CYPAR---RGPQLVCTGSDDGTVKL 178

Query: 394 WSV 386
           W +
Sbjct: 179 WDI 181

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>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2|
          Length = 501

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           TGS DK +K+W   +T  +  L TL   +  +   +W+      N+  IA   D+  +++
Sbjct: 230 TGSADKQIKVW---NTVDMTYLQTLASHQLGINDFSWSS-----NSQFIASASDDTTVKI 281

Query: 394 WSV 386
           + V
Sbjct: 282 FDV 284

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>FZR_HUMAN (Q9UM11) Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog)|
           (hCDH1) (CDC20-like protein 1)
          Length = 496

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 529 TSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIELW 392
           TS V  L  L    +SVT++ W+ R       ++AVG   G +++W
Sbjct: 216 TSQVTRLCDLSVEGDSVTSVGWSER-----GNLVAVGTHKGFVQIW 256

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>FZR_MOUSE (Q9R1K5) Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog)|
          Length = 493

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 529 TSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIELW 392
           TS V  L  L    +SVT++ W+ R       ++AVG   G +++W
Sbjct: 216 TSQVTRLCDLSVEGDSVTSVGWSER-----GNLVAVGTHKGFVQIW 256

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>PI3R4_RAT (P0C0R5) Phosphoinositide 3-kinase regulatory subunit 4 (EC 2.7.11.1)|
            (PI3-kinase regulatory subunit 4)
          Length = 1357

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQ----DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMD 413
            FAT S D TVKIW  Q     T++ + + T  +    V  L +      + +  +A+  D
Sbjct: 1007 FATCSNDGTVKIWNSQKMEGKTTTTRSILTYSRIGGRVKTLTF-----CQGSHYLAIASD 1061

Query: 412  NGLIELWSV 386
            NG ++L  +
Sbjct: 1062 NGAVQLLGI 1070

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>PI3R4_MOUSE (Q8VD65) Phosphoinositide 3-kinase regulatory subunit 4 (EC 2.7.11.1)|
            (PI3-kinase regulatory subunit 4)
          Length = 1357

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQ----DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMD 413
            FAT S D TVKIW  Q     T++ + + T  +    V  L +      + +  +A+  D
Sbjct: 1007 FATCSNDGTVKIWNSQKMEGKTTTTRSILTYSRIGGRVKTLTF-----CQGSHYLAIASD 1061

Query: 412  NGLIELWSV 386
            NG ++L  +
Sbjct: 1062 NGAVQLLGI 1070

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>PI3R4_HUMAN (Q99570) Phosphoinositide 3-kinase regulatory subunit 4 (EC 2.7.11.1)|
            (PI3-kinase regulatory subunit 4) (PI3-kinase p150
            subunit) (Phosphoinositide 3-kinase adaptor protein)
          Length = 1357

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -2

Query: 580  FATGSRDKTVKIWCVQ----DTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMD 413
            FAT S D TVKIW  Q     T++ + + T  +    V  L +      + +  +A+  D
Sbjct: 1007 FATCSNDGTVKIWNSQKMEGKTTTTRSILTYSRIGGRVKTLTF-----CQGSHYLAIASD 1061

Query: 412  NGLIELWSV 386
            NG ++L  +
Sbjct: 1062 NGAVQLLGI 1070

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>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAW 464
           ATGS DK++ +W +++  +   L TL    +SVT+L+W
Sbjct: 303 ATGSADKSIGLWDLRNLKT--KLHTLECHTDSVTSLSW 338

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>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           ATGS D+TV++W V + + V++         S+T         + N   +A G  +G + 
Sbjct: 644 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF--------SPNGRFLATGATDGRVL 695

Query: 397 LWSV 386
           LW +
Sbjct: 696 LWDI 699

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>YIRF_SCHPO (Q9P7I3) Hypothetical WD-repeat protein C664.15 in chromosome I|
          Length = 651

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DKTVK+W   D + V  L +L    + V+ L       A     IA G  +  + 
Sbjct: 348 ATASTDKTVKVW---DMAGVVYLGSLKGHSDYVSCL-------AIQDSFIATGSMDTTVR 397

Query: 397 LWSV 386
           LW++
Sbjct: 398 LWNL 401

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>WDR57_MOUSE (Q6PE01) WD-repeat protein 57|
          Length = 358

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           TGS D TVK+W ++  ++V+       F+ +   LA T  D +    II+ G+DN  I++
Sbjct: 170 TGSDDGTVKLWDIRKKAAVQ------TFQNTYQVLAVTFNDTSDQ--IISGGIDND-IKV 220

Query: 394 WSV 386
           W +
Sbjct: 221 WDL 223



 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           + S DKTV +W  +    VK L     F  S     +  R   R   ++  G D+G ++L
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNS----CYPAR---RGPQLVCTGSDDGTVKL 179

Query: 394 WSV 386
           W +
Sbjct: 180 WDI 182

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>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 800

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           ATGS D+TV++W V + + V++         S+T         + N   +A G  +G + 
Sbjct: 643 ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF--------SPNGRFLATGATDGRVL 694

Query: 397 LWSV 386
           LW +
Sbjct: 695 LWDI 698

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>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)|
          Length = 367

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/104 (22%), Positives = 43/104 (41%)
 Frame = -2

Query: 583 EFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGL 404
           +F + SRDKTV +W +Q +S        P+ + S  A+  TG   + ++  +  G  +  
Sbjct: 117 QFFSASRDKTVLMWDLQGSSH-------PRQQLSGHAMVVTGLAVSPDSSQLCTGSRDNS 169

Query: 403 IELWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLR 272
           + LW V             + +   C +  +P +   S    +R
Sbjct: 170 LLLWDVGTGQCVERASVSRNLVTHLCWVPSEPYIVQTSEDKTIR 213

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>SPP41_YEAST (P38904) Protein SPP41|
          Length = 1435

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 15/71 (21%)
 Frame = +3

Query: 324 MHATLRGDRSELLSEAALPPETLQSSISPLS---------------MPTAIMPALRARSR 458
           + ATL+   +ELLS A     + + SI P+S               +P A++ A + + R
Sbjct: 312 VEATLKAFENELLSSAPTEEPSQEQSIGPVSSRKAVEPPRKPTADDIPLAMLQAFKPKKR 371

Query: 459 PVQANAVTLSR 491
           P Q    T S+
Sbjct: 372 PPQEKKKTKSK 382

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>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing|
           protein 5) (Complexed with cdc5 protein 1)
          Length = 473

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 583 EFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALA 467
           +  TGS D T+++W   D ++ K L TL   +++V AL+
Sbjct: 303 QVVTGSMDSTIRLW---DLAAGKTLTTLTHHKKTVRALS 338

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>HAT2_NEUCR (Q7S7N3) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 564

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIE 398
           AT S DKT+ IW +++  S   + TL   +++VT+L W   + A    I+  G  +  + 
Sbjct: 305 ATASADKTIGIWDMRNMKS--KVHTLEGHQDAVTSLEWHPTESA----ILGSGSYDRRLL 358

Query: 397 LWSV 386
            W +
Sbjct: 359 FWDI 362

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>FBW1B_HUMAN (Q9UKB1) F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B)|
           (F-box and WD-repeats protein beta-TrCP2)
          Length = 542

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           + S D+T+K+W    TS+ + + TL   +  +  L +  RDR     ++  G  +  I L
Sbjct: 378 SASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQY--RDR-----LVVSGSSDNTIRL 427

Query: 394 WSV 386
           W +
Sbjct: 428 WDI 430

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>PWP2_CAEEL (P91341) Periodic tryptophan protein 2 homolog|
          Length = 910

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 577 ATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRA 446
           ATG+ D  VKIW   ++ S     T  +    VTA+ WT   RA
Sbjct: 376 ATGAEDGKVKIW---NSRSSFCTVTFDEHTSGVTAVKWTQSGRA 416

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>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated|
            protein 1) (Telomerase protein 1) (p240) (p80 telomerase
            homolog)
          Length = 2627

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 577  ATGSRDKTVKIWCVQDTSSVKLLATLPQ-FRESVTALAWT 461
            ATG RD+++  W V+   +  L+ + P   R+ VT  AWT
Sbjct: 2077 ATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWT 2116

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>WDR46_HUMAN (O15213) WD-repeat protein 46 (WD-repeat protein BING4)|
          Length = 610

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
 Frame = -2

Query: 433 IIAVGMDNGLIELWSVXXXXXXXXXXXXXSPLNVACMLRFDPLLCHVSTVHRLRWQKPDS 254
           +I +G  NG + LWS                   A       +LCH   V  +       
Sbjct: 331 VIHLGHSNGTVSLWS------------------PAMKEPLAKILCHRGGVRAV------- 365

Query: 253 AVEKAAVELASCGADHCVRVFAVRDS*GIYATL*LRNFEH--PHL-FSQQDI 107
           AV+     +A+ G DH +++F +R   G Y  L  R   H   HL FSQ+ +
Sbjct: 366 AVDSTGTYMATSGLDHQLKIFDLR---GTYQPLSTRTLPHGAGHLAFSQRGL 414

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>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLIEL 395
           TGS DKT ++W V    SV++     Q    VTA+A      A +   +A     GLI L
Sbjct: 480 TGSSDKTCRLWDVHRGHSVRVFNGHTQ---PVTAVA-----IAPDGHTMASADSEGLIHL 531

Query: 394 WSV 386
           W +
Sbjct: 532 WDI 534

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>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 904

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           TGS D TV+IW    +S+ +L +TL    E V  +A       R +  +A+G D G I
Sbjct: 245 TGSEDGTVRIW---HSSTYRLESTLNYGMERVWCVA-----SLRGSNNVALGYDEGSI 294

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>PRP46_KLULA (Q6CKE8) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 434

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -2

Query: 580 FATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGR 455
           FATGS D T+KIW   D ++ KL  TL     SV  +A + R
Sbjct: 138 FATGSNDTTIKIW---DLAAGKLKITLIGHVMSVRDIAISKR 176

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>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           TGS D TV+IW    +S+ +L +TL    E V  +A       R +  +A+G D G I
Sbjct: 246 TGSEDGTVRIW---HSSTYRLESTLNYGMERVWCVA-----SLRGSNNVALGYDEGSI 295

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>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           TGS D TV+IW    +S+ +L +TL    E V  +A       R +  +A+G D G I
Sbjct: 245 TGSEDGTVRIW---HSSTYRLESTLNYGMERVWCVA-----SLRGSNNVALGYDEGSI 294

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>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -2

Query: 574 TGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNGLI 401
           TGS D TV+IW    +S+ +L +TL    E V  +A       R +  +A+G D G I
Sbjct: 245 TGSEDGTVRIW---HSSTYRLESTLNYGMERVWCVA-----SLRGSNNVALGYDEGSI 294

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>YR061_MIMIV (Q5UPD3) Putative BTB/POZ domain and WD-repeat protein R61|
          Length = 496

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCV--QDTSS---VKLLATLPQF---RESVTALAWTGRDRARNAGI 431
           Y   +GS D+T+KIW V  QD +S    KL  TL  F   +E +        D +     
Sbjct: 165 YNIVSGSLDRTIKIWNVETQDFNSKIFTKLSKTLRYFPINKEQIFDNNIKCMDYSHKFNQ 224

Query: 430 IAVGMDNGLIELWSV 386
           I  G  NG I+LW++
Sbjct: 225 IISG-SNGGIKLWNI 238

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>PLRG1_HUMAN (O43660) Pleiotropic regulator 1|
          Length = 514

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -2

Query: 586 YEFATGSRDKTVKIWCVQDTSSVKLLATLPQFRESVTALAWTGRDRARNAGIIAVGMDNG 407
           Y FA+GS D  +K W   D S ++ L+       ++T           + G++  G DNG
Sbjct: 385 YTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTV---------NSDGVLVSGADNG 434

Query: 406 LIELW 392
            + LW
Sbjct: 435 TMHLW 439

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>KIF6_HUMAN (Q6ZMV9) Kinesin-like protein KIF6|
          Length = 814

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 522 QSSCSQHCLNSVRVSQHWPGRAVIELVMPALLPLAWTMD*SSSGVFQGGELLQTVARIGL 343
           Q+S   HC+ ++ +S   PG A +      L+ LA +   + +GV  GG LL     I L
Sbjct: 218 QASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGV--GGHLLTEAKYINL 275


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,741,477
Number of Sequences: 219361
Number of extensions: 1490421
Number of successful extensions: 4551
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 4084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4514
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result