Clone Name | rbasd19i06 |
---|---|
Clone Library Name | barley_pub |
>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)| (RNase LX) Length = 237 Score = 90.1 bits (222), Expect = 6e-18 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 2/117 (1%) Frame = -3 Query: 602 KSWKSAWKTSGVCSGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFG-LYSLEKIKKAI 426 K W W G CS L+ AYFQ A+ ++K N L L + GIKP G Y +E IKKAI Sbjct: 112 KFWSHEWLKHGTCSALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAI 171 Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP-KPQKFTCSDEILFHPF 258 + G G P I+C+ QLYQ+++CV A I+CP P C +I F F Sbjct: 172 EKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSF 228
>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)| Length = 222 Score = 84.3 bits (207), Expect(2) = 1e-17 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Frame = -3 Query: 602 KSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKA 429 K W W+ G C S LD YF+A + L+ K N L L + GIKPD Y ++ I+ Sbjct: 106 KFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENT 165 Query: 428 IQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258 I+ G AP I+C+K QLYQI++CV A I CP C + F F Sbjct: 166 IKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222 Score = 25.0 bits (53), Expect(2) = 1e-17 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -2 Query: 660 ISGLRQYWSNIKCPSNNG 607 +S L++ W + CPSN+G Sbjct: 87 MSDLQREWPTLSCPSNDG 104
>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)| Length = 230 Score = 86.3 bits (212), Expect = 9e-17 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Frame = -3 Query: 596 WKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQ 423 W+ W+ G CS +D YFQ A+ L+ K N L L GI PD YSLE I+ +I+ Sbjct: 116 WEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIK 175 Query: 422 AGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258 G P ++C++ QLYQ+++CV LIECP C EI F F Sbjct: 176 ESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230
>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)| (RNase LE) Length = 230 Score = 74.3 bits (181), Expect(2) = 4e-15 Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 3/116 (2%) Frame = -3 Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAI 426 W W+ G C+ + AYF+ A+ L+++I+ LS L I PD Y L I+ AI Sbjct: 115 WSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAI 174 Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258 ++ G P IQC+ QLYQ++ICV +LIECP C I F F Sbjct: 175 KSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF 230 Score = 26.9 bits (58), Expect(2) = 4e-15 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -2 Query: 711 PETSCSSTPFNSDEILG-ISGLRQYWSNIKCPSNNG 607 P ++P++ +I IS ++Q W + CPS +G Sbjct: 76 PSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSG 111
>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)| Length = 200 Score = 57.4 bits (137), Expect(2) = 8e-10 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Frame = -3 Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 W+ W+ G C+ D + YF + L ++ S L GIKP Y + IK Sbjct: 79 WRHEWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKLGIKPSISYYQISDIKH 138 Query: 431 AIQAGTGVAPLIQC--SKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHP 261 A+ GV P +QC K L QI +C+ D + L +CP+P C D +F+P Sbjct: 139 ALVGVYGVVPKVQCLPPKSGEKVQTLGQIELCLTRDLQ-LQDCPEPGLEICEDGPVFYP 196 Score = 25.8 bits (55), Expect(2) = 8e-10 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -2 Query: 693 STPFNSDEILG-ISGLRQYWSNIKCPSNN 610 S PFN DEI G + +R YW ++ S N Sbjct: 45 SWPFNPDEIKGLLPDMRLYWPDVLHSSPN 73
>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar| glycoprotein 7) (S7-RNase) Length = 218 Score = 58.5 bits (140), Expect = 2e-08 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%) Frame = -3 Query: 605 QKSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL-YSLEKIK 435 Q W+ + G C + + YF A+AL+ K + LS L + GI P G+ Y+++KI Sbjct: 103 QNFWRHEYNKHGKCCSESYNREQYFDLAMALKDKFDLLSSLRNHGIIPGRGMKYTVQKIN 162 Query: 434 KAIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQ--KFTCSDEILF 267 I+ T P + C+KG + L +I IC K +I CP P+ K T S+EI F Sbjct: 163 STIKKITQGYPNLSCTKGIME---LVEIGICFDSMVKNVINCPHPKTCKPTGSNEIKF 217
>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 214 Score = 58.5 bits (140), Expect = 2e-08 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Frame = -3 Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 Q WK + G C D + YF A+ LR K + LS L + GI F Y+++ + Sbjct: 103 QAFWKDEYVKHGTCCSDKFDREQYFDLAMTLRDKFDLLSSLRNHGISRGFS-YTVQNLNN 161 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTC 285 I+A TG P + CS+ +L +I IC E K +I+CP P+ TC Sbjct: 162 TIKAITGGFPNLTCSR----LRELKEIGICFDETVKNVIDCPNPK--TC 204
>RN28_PANGI (P83618) Ribonuclease-like storage protein precursor (Root 28 kDa| major protein) Length = 238 Score = 57.8 bits (138), Expect = 3e-08 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Frame = -3 Query: 596 WKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQ 423 W+ WK G CS L YF+ A+A R + + L +GI P+ LY + IK+AI+ Sbjct: 110 WEHEWKKHGRCSEALLKQTDYFRTALAFRKAFDIVGLLNQEGIYPNNDLYRPKMIKEAIK 169 Query: 422 AGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP 306 P I +K ++ L I +CV + A ++CP Sbjct: 170 KHLNAVPEIDFTKNENSEYVLTDINVCVNQQATRFVDCP 208
>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)| Length = 191 Score = 53.9 bits (128), Expect = 5e-07 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 3/116 (2%) Frame = -3 Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 Q+ W W G CS + AYF+ A+ +R+ + + L P+ S + IK Sbjct: 79 QQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPNGRTKSRQAIKG 138 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQ-LYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267 ++A G P ++C P K L Q+ C A+D TLI+C + TC +F Sbjct: 139 FLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTRD---TCGANFIF 191
>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar| glycoprotein 6) (S6-RNase) Length = 215 Score = 52.8 bits (125), Expect = 1e-06 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%) Frame = -3 Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 Q W+ + G C + YF+ A+AL+ K + L+ L + GI + Y+++KI Sbjct: 103 QNFWRREYIKHGTCCSEIYNQVQYFRLAMALKDKFDLLTSLKNHGIIRGYK-YTVQKINN 161 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTC 285 I+ T P + C+KG +L+ + IC AK +I+CP P+ TC Sbjct: 162 TIKTVTKGYPNLSCTKGQ----ELWFVGICFDSTAKNVIDCPNPK--TC 204
>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 235 Score = 51.2 bits (121), Expect = 3e-06 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Frame = -3 Query: 605 QKSWKSAWKTSGVCS----GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKI 438 QK W + WK G C+ +D YF A+ L+ + N L L K + P + + Sbjct: 116 QKFWVTQWKKHGACALPMYSFND--YFVKALELKKRNNVLDMLSRKSLTPGDQRVDVSDV 173 Query: 437 KKAIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEIL 270 AI TG +++C +G L ++ IC +I+CP P F C D+ L Sbjct: 174 NGAITKVTGGIAILKCPEG-----YLTEVIICFDPSGFPVIDCPGP--FPCKDDPL 222
>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)| Length = 223 Score = 51.2 bits (121), Expect = 3e-06 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%) Frame = -3 Query: 596 WKSAWKTSGVCSGL----DDKAYFQAAIALRSKINPLSRLVSKGIKP-DFGLYSLEKIKK 432 W + G CS D YF I L ++ N + L S+ I P D Y I Sbjct: 110 WTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITN 169 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267 AI G P IQCS G QL + +C+ +++ ++++CP Q ++CS + F Sbjct: 170 AITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQGWSCSGSVKF 219
>RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 256 Score = 50.8 bits (120), Expect = 4e-06 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Frame = -3 Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 WK W+ G C+ D K YF ++ L +++ S L+ GIKP Y + K Sbjct: 111 WKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKD 170 Query: 431 AIQAGTGVAPLIQCSKGPFDK--FQLYQIFICVAEDAKTLIECPKP 300 A+ GV P IQC D+ + QI +C+ + + L C +P Sbjct: 171 ALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEP 216
>RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar| glycoprotein 2) (S2-RNase) Length = 223 Score = 48.9 bits (115), Expect = 2e-05 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Frame = -3 Query: 605 QKSWKSAWKTSGVCS--GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 Q WK +K G C + YF A+ L+ K + L+ L + GI P ++ +KI+ Sbjct: 106 QPLWKDQYKKHGTCCLPRYNQLQYFLLAMRLKEKFDLLTTLRTHGITPGTK-HTFKKIQD 164 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIEC 309 AI+ T P ++C + +LY+I IC +A +L C Sbjct: 165 AIKTVTQEVPDLKCVENIQGVLELYEIGICFTPEADSLFPC 205
>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)| (SF11-RNase) Length = 196 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Frame = -3 Query: 605 QKSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 Q SWK + G C + YF A+ L+ K + L L + I P Y+ + I Sbjct: 81 QPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIPGSS-YTFQDIFD 139 Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267 AI+ + P I+C++ +LY+I IC +A ++ CP+ + ++LF Sbjct: 140 AIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRCPQSDTCDKTAKVLF 194
>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)| Length = 259 Score = 45.8 bits (107), Expect = 1e-04 Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Frame = -3 Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 WK W G C+ D K YF ++ L +I+ S L GIKP Y L K Sbjct: 115 WKHEWVKHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPSINYYQLADFKD 174 Query: 431 AIQAGTGVAPLIQC---SKGPFDKFQLYQIFICVAEDAKTLIECPKP 300 A+ GV P IQC +G + + QI +C ++ L C +P Sbjct: 175 ALTRIYGVVPKIQCLMPEQGESVQ-TVGQIELCFTKEDLHLRNCTEP 220
>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)| Length = 228 Score = 44.7 bits (104), Expect = 3e-04 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Frame = -3 Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIAL--RSKINPLSRLVSKGIKPDFGLYSLEKIKK 432 W+ W G C DD Y Q I + K N + L I+P+ L I+ Sbjct: 109 WEKEWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNVSAILSKAAIQPNGTNRPLVDIEN 168 Query: 431 AIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP--KPQ--KFTCSDEILF 267 AI+ GT P +C K +L ++ +C D K I CP PQ +F+C + + Sbjct: 169 AIRRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLKKFINCPHGPPQGSRFSCPSSVQY 228
>RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNase Rh)| Length = 238 Score = 44.3 bits (103), Expect = 4e-04 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 13/93 (13%) Frame = -3 Query: 596 WKSAWKTSGVC-------------SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL 456 W W G C G D YFQ A+ LRS+ N S GI P G Sbjct: 118 WSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPG-GT 176 Query: 455 YSLEKIKKAIQAGTGVAPLIQCSKGPFDKFQLY 357 Y+ +++ AI++ G I CS G LY Sbjct: 177 YTATEMQSAIESYFGAKAKIDCSSGTLSDVALY 209
>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar| glycoprotein 4) (S4-RNase) Length = 233 Score = 42.4 bits (98), Expect = 0.002 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Frame = -3 Query: 596 WKSAWKTSGVCS--GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL-YSLEKIKKAI 426 W+ W+ G C + + YF A+ L+ +++ L+ L + P +S+ ++ I Sbjct: 118 WQDQWRKHGSCCFPPHESEIYFLKALELKDRLDVLTILENNNFNPGTPQPFSVLRVFNTI 177 Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPK 303 G P+++C++ L ++ ICV + +++ CP+ Sbjct: 178 SRAIGKTPILKCAQS-----YLKEVVICVDNNGASVVHCPR 213
>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)| Length = 180 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/97 (23%), Positives = 42/97 (43%) Frame = -3 Query: 596 WKSAWKTSGVCSGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQAG 417 W W G CSG + +F ++L + + S L + GI+P S + + I Sbjct: 72 WSHEWSKHGTCSGYAEHDFFATVLSLYDQYDVKSALDNGGIEPGSSSVSSDSLISVITDN 131 Query: 416 TGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP 306 G P++ C F + +C+ ++ + L +CP Sbjct: 132 IGGVPVLNCEGSTF-----ASVGLCITKNLE-LRDCP 162
>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)| Length = 221 Score = 40.8 bits (94), Expect = 0.004 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 7/106 (6%) Frame = -3 Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIA--LRSKINPLSRLVSKG-IKPDFGLYSLEKIK 435 W+ W G C+ + K YF+ I L K N +SR++S I+P+ +L +I+ Sbjct: 102 WRKQWYKHGSCASPALPNQKHYFETVIRMFLAEKQN-VSRILSMATIEPEGKNRTLLEIQ 160 Query: 434 KAIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300 AI+AGT + P ++C K +L ++ +C + I CP+P Sbjct: 161 NAIRAGTNNMIPKLKCQKVN-GMTELVEVTLCHDSNLTQFINCPRP 205
>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)| Length = 227 Score = 40.0 bits (92), Expect = 0.007 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%) Frame = -3 Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432 W W G C ++ YF+ I + SK +SR++SK I+PD +L I+ Sbjct: 108 WDKEWMKHGTCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRALLDIEN 167 Query: 431 AIQAGT-GVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300 AI+ G P ++C K +L +I +C + + I+CP P Sbjct: 168 AIRNGADNKKPKLKCQKKGTTT-ELVEITLCSDKSGEHFIDCPHP 211
>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)| Length = 228 Score = 39.7 bits (91), Expect = 0.010 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%) Frame = -3 Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432 W+ W G C DD Y + I + ++ +S ++SK I+P+ SL I+ Sbjct: 109 WEREWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNVSAILSKATIQPNGNNRSLVDIEN 168 Query: 431 AIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIEC----PKPQKFTCSDEILF 267 AI++G P +C K +L ++ +C D I C PK ++ C + + Sbjct: 169 AIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCPHGPPKGSRYFCPANVKY 228
>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)| Length = 222 Score = 39.3 bits (90), Expect = 0.013 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%) Frame = -3 Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432 W W G C ++ YF+ I + SK +SR++SK I+PD +L I+ Sbjct: 103 WDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRALLDIEN 162 Query: 431 AIQAGT-GVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300 AI+ G P ++C K +L +I +C + + I+CP P Sbjct: 163 AIRNGADNKKPKLKCQKKGTTT-ELVEITLCSDKSGEHFIDCPHP 206
>RNL2_LENED (P81296) Ribonuclease Le2 (EC 3.1.27.1) (RNase Le2)| Length = 239 Score = 38.5 bits (88), Expect = 0.022 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 15/98 (15%) Frame = -3 Query: 605 QKSWKSAWKTSGVC--------------SGLDDKAYFQAAIALRSKINPLSRLVSKGIKP 468 ++ W+ W T G C G + A+F+ + L + L ++GIKP Sbjct: 105 EELWEHEWATHGTCYSTLQTSCLPEGSPKGAEAVAFFEQVVTLFKTLPTYEWLTNQGIKP 164 Query: 467 DFG-LYSLEKIKKAIQAGTGVAPLIQCSKGPFDKFQLY 357 ++ + A++A GV P + C D+ Y Sbjct: 165 SSSTTHTYSALTAALEAEAGVIPALNCDGSDLDEIYWY 202
>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine| receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release channel) Length = 5035 Score = 32.0 bits (71), Expect = 2.0 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +2 Query: 65 EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229 E K+ N M + + S +NP + +Q+ + + W R P+ LR TRR Sbjct: 1565 ELGKQKNIMPLSAAMFLSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLRVETRR 1619
>ABCX_GALSU (P35020) Probable ATP-dependent transporter ycf16| Length = 257 Score = 31.2 bits (69), Expect = 3.5 Identities = 18/69 (26%), Positives = 36/69 (52%) Frame = +3 Query: 276 LVGARELLRFRALDERFGVLGHADEDLVQLELIERPFATLDQRRHTGARLDGLLDLLQAV 455 LVG E +R ++E F +++Q+ L++ A LD+ +G +D L D+ A+ Sbjct: 137 LVGLDESFLYRKVNEGFSGGEKKKNEILQMSLLDAKLAILDE-TDSGLDIDALQDISNAI 195 Query: 456 QAKVGLDPF 482 ++ + + F Sbjct: 196 KSILKMSQF 204
>ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precursor (Zona| pellucida sperm-binding protein B) (Zona pellucida glycoprotein ZP-X) (RC55) Length = 540 Score = 30.4 bits (67), Expect = 5.9 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = +1 Query: 277 SSEHVNFCGFGHSMSVLASSATQMKIWYSWNLSNGPL----LHWISG----ATPVPAWMA 432 SSE VN C +G++++ + I S N+S+ PL +H + G PV A A Sbjct: 176 SSEEVNACYYGNTVTSHCTQEGHFSIAVSRNVSSPPLHLDSVHLVFGNDSECQPVVATRA 235 Query: 433 FLIF 444 F++F Sbjct: 236 FVLF 239
>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine| receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release channel) Length = 5038 Score = 30.4 bits (67), Expect = 5.9 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = +2 Query: 65 EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229 E K+ N M + + S +NP + +Q+ + + W R P+ L+ TRR Sbjct: 1564 ELGKQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRR 1618
>ZP4_HUMAN (Q12836) Zona pellucida sperm-binding protein 4 precursor (Zona| pellucida sperm-binding protein B) Length = 540 Score = 30.0 bits (66), Expect = 7.7 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Frame = +1 Query: 277 SSEHVNFCGFGHSMSVLASSATQMKIWYSWNLSNGPL--------LHWISGATPVPAWMA 432 SSE VN C +G+++++ + I S N+++ PL L S PV A A Sbjct: 172 SSEEVNSCYYGNTVTLHCTREGHFSIAVSRNVTSPPLLLDSVRLALRNDSACNPVMATQA 231 Query: 433 FLIF 444 F++F Sbjct: 232 FVLF 235
>RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type ryanodine| receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release channel) Length = 5037 Score = 30.0 bits (66), Expect = 7.7 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = +2 Query: 65 EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229 E K+ N M + + S +NP + +Q+ + + W R P+ L+ TRR Sbjct: 1565 ELGKQKNIMPLSAAMFLSERKNPAPQCPPRLEVQMLMPVSWSRMPNHFLQVETRR 1619
>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 245 Score = 30.0 bits (66), Expect = 7.7 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -3 Query: 527 IALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQAGT-GVA 405 I++ S IN + +V + FGL S+E IKKA+ G G+A Sbjct: 173 ISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIA 214
>KPB2_MOUSE (Q8BWJ3) Phosphorylase b kinase alpha regulatory chain, liver| isoform (Phosphorylase kinase alpha L subunit) Length = 1235 Score = 26.6 bits (57), Expect(2) = 9.0 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 348 HLRGRGRQNAHRVPETAEVHVLRRDPLPPLQEVDAKAGR 232 H++G +++ V A+VH +R P L + AK GR Sbjct: 450 HIKGLLKEHGMTVQSIADVHPIRVQPGRILSHIYAKLGR 488 Score = 21.6 bits (44), Expect(2) = 9.0 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -3 Query: 512 KINPLSRLVSKGIKPD 465 +I+PL+R S +KPD Sbjct: 422 EIDPLNRRFSTSVKPD 437 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,487,945 Number of Sequences: 219361 Number of extensions: 1801556 Number of successful extensions: 6414 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6040 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6410 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)