ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19i06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC ... 90 6e-18
2RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1) 84 1e-17
3RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1) 86 9e-17
4RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC ... 74 4e-15
5RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-) 57 8e-10
6RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (St... 59 2e-08
7RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (St... 59 2e-08
8RN28_PANGI (P83618) Ribonuclease-like storage protein precursor ... 58 3e-08
9RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC) 54 5e-07
10RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (St... 53 1e-06
11RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (St... 51 3e-06
12RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RN... 51 3e-06
13RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Rib... 51 4e-06
14RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (St... 49 2e-05
15RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar gl... 46 1e-04
16RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Rib... 46 1e-04
17RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1... 45 3e-04
18RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNa... 44 4e-04
19RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (St... 42 0.002
20RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb) 42 0.002
21RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2... 41 0.004
22RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5... 40 0.007
23RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4... 40 0.010
24RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3... 39 0.013
25RNL2_LENED (P81296) Ribonuclease Le2 (EC 3.1.27.1) (RNase Le2) 39 0.022
26RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type rya... 32 2.0
27ABCX_GALSU (P35020) Probable ATP-dependent transporter ycf16 31 3.5
28ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precur... 30 5.9
29RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type r... 30 5.9
30ZP4_HUMAN (Q12836) Zona pellucida sperm-binding protein 4 precur... 30 7.7
31RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type r... 30 7.7
32TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20) 30 7.7
33KPB2_MOUSE (Q8BWJ3) Phosphorylase b kinase alpha regulatory chai... 27 9.0

>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 90.1 bits (222), Expect = 6e-18
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
 Frame = -3

Query: 602 KSWKSAWKTSGVCSGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFG-LYSLEKIKKAI 426
           K W   W   G CS L+  AYFQ A+  ++K N L  L + GIKP  G  Y +E IKKAI
Sbjct: 112 KFWSHEWLKHGTCSALNQHAYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAI 171

Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP-KPQKFTCSDEILFHPF 258
           + G G  P I+C+       QLYQ+++CV   A   I+CP  P    C  +I F  F
Sbjct: 172 EKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPIFPHGGKCGSKIEFPSF 228



to top

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 84.3 bits (207), Expect(2) = 1e-17
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
 Frame = -3

Query: 602 KSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKA 429
           K W   W+  G C  S LD   YF+A + L+ K N L  L + GIKPD   Y ++ I+  
Sbjct: 106 KFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENT 165

Query: 428 IQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258
           I+   G AP I+C+K      QLYQI++CV   A   I CP      C   + F  F
Sbjct: 166 IKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCPVMPHGRCDSRVQFPKF 222



 Score = 25.0 bits (53), Expect(2) = 1e-17
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 660 ISGLRQYWSNIKCPSNNG 607
           +S L++ W  + CPSN+G
Sbjct: 87  MSDLQREWPTLSCPSNDG 104



to top

>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 86.3 bits (212), Expect = 9e-17
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = -3

Query: 596 WKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQ 423
           W+  W+  G CS   +D   YFQ A+ L+ K N L  L   GI PD   YSLE I+ +I+
Sbjct: 116 WEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIK 175

Query: 422 AGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258
              G  P ++C++      QLYQ+++CV      LIECP      C  EI F  F
Sbjct: 176 ESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEFPSF 230



to top

>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 74.3 bits (181), Expect(2) = 4e-15
 Identities = 42/116 (36%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -3

Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAI 426
           W   W+  G C+     +  AYF+ A+ L+++I+ LS L    I PD   Y L  I+ AI
Sbjct: 115 WSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAI 174

Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHPF 258
           ++  G  P IQC+       QLYQ++ICV     +LIECP      C   I F  F
Sbjct: 175 KSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF 230



 Score = 26.9 bits (58), Expect(2) = 4e-15
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 711 PETSCSSTPFNSDEILG-ISGLRQYWSNIKCPSNNG 607
           P     ++P++  +I   IS ++Q W  + CPS +G
Sbjct: 76  PSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSG 111



to top

>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)|
          Length = 200

 Score = 57.4 bits (137), Expect(2) = 8e-10
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           W+  W+  G C+   D     + YF   + L  ++   S L   GIKP    Y +  IK 
Sbjct: 79  WRHEWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKLGIKPSISYYQISDIKH 138

Query: 431 AIQAGTGVAPLIQC--SKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILFHP 261
           A+    GV P +QC   K       L QI +C+  D + L +CP+P    C D  +F+P
Sbjct: 139 ALVGVYGVVPKVQCLPPKSGEKVQTLGQIELCLTRDLQ-LQDCPEPGLEICEDGPVFYP 196



 Score = 25.8 bits (55), Expect(2) = 8e-10
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 693 STPFNSDEILG-ISGLRQYWSNIKCPSNN 610
           S PFN DEI G +  +R YW ++   S N
Sbjct: 45  SWPFNPDEIKGLLPDMRLYWPDVLHSSPN 73



to top

>RNS7_NICAL (Q40381) Ribonuclease S-7 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 7) (S7-RNase)
          Length = 218

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL-YSLEKIK 435
           Q  W+  +   G C     + + YF  A+AL+ K + LS L + GI P  G+ Y+++KI 
Sbjct: 103 QNFWRHEYNKHGKCCSESYNREQYFDLAMALKDKFDLLSSLRNHGIIPGRGMKYTVQKIN 162

Query: 434 KAIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQ--KFTCSDEILF 267
             I+  T   P + C+KG  +   L +I IC     K +I CP P+  K T S+EI F
Sbjct: 163 STIKKITQGYPNLSCTKGIME---LVEIGICFDSMVKNVINCPHPKTCKPTGSNEIKF 217



to top

>RNS2_NICAL (P04007) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           Q  WK  +   G C     D + YF  A+ LR K + LS L + GI   F  Y+++ +  
Sbjct: 103 QAFWKDEYVKHGTCCSDKFDREQYFDLAMTLRDKFDLLSSLRNHGISRGFS-YTVQNLNN 161

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTC 285
            I+A TG  P + CS+      +L +I IC  E  K +I+CP P+  TC
Sbjct: 162 TIKAITGGFPNLTCSR----LRELKEIGICFDETVKNVIDCPNPK--TC 204



to top

>RN28_PANGI (P83618) Ribonuclease-like storage protein precursor (Root 28 kDa|
           major protein)
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
 Frame = -3

Query: 596 WKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQ 423
           W+  WK  G CS   L    YF+ A+A R   + +  L  +GI P+  LY  + IK+AI+
Sbjct: 110 WEHEWKKHGRCSEALLKQTDYFRTALAFRKAFDIVGLLNQEGIYPNNDLYRPKMIKEAIK 169

Query: 422 AGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP 306
                 P I  +K    ++ L  I +CV + A   ++CP
Sbjct: 170 KHLNAVPEIDFTKNENSEYVLTDINVCVNQQATRFVDCP 208



to top

>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)|
          Length = 191

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           Q+ W   W   G CS    +  AYF+ A+ +R+  + +  L      P+    S + IK 
Sbjct: 79  QQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPNGRTKSRQAIKG 138

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQ-LYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267
            ++A  G  P ++C   P  K   L Q+  C A+D  TLI+C +    TC    +F
Sbjct: 139 FLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTRD---TCGANFIF 191



to top

>RNS6_NICAL (Q40379) Ribonuclease S-6 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 6) (S6-RNase)
          Length = 215

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVCSG--LDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           Q  W+  +   G C     +   YF+ A+AL+ K + L+ L + GI   +  Y+++KI  
Sbjct: 103 QNFWRREYIKHGTCCSEIYNQVQYFRLAMALKDKFDLLTSLKNHGIIRGYK-YTVQKINN 161

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTC 285
            I+  T   P + C+KG     +L+ + IC    AK +I+CP P+  TC
Sbjct: 162 TIKTVTKGYPNLSCTKGQ----ELWFVGICFDSTAKNVIDCPNPK--TC 204



to top

>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 235

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVCS----GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKI 438
           QK W + WK  G C+      +D  YF  A+ L+ + N L  L  K + P      +  +
Sbjct: 116 QKFWVTQWKKHGACALPMYSFND--YFVKALELKKRNNVLDMLSRKSLTPGDQRVDVSDV 173

Query: 437 KKAIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEIL 270
             AI   TG   +++C +G      L ++ IC       +I+CP P  F C D+ L
Sbjct: 174 NGAITKVTGGIAILKCPEG-----YLTEVIICFDPSGFPVIDCPGP--FPCKDDPL 222



to top

>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)|
          Length = 223

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGL----DDKAYFQAAIALRSKINPLSRLVSKGIKP-DFGLYSLEKIKK 432
           W   +   G CS      D   YF   I L ++ N  + L S+ I P D   Y    I  
Sbjct: 110 WTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITN 169

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267
           AI    G  P IQCS G     QL  + +C+ +++ ++++CP  Q ++CS  + F
Sbjct: 170 AITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSLSIMDCPDLQGWSCSGSVKF 219



to top

>RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 256

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           WK  W+  G C+   D     K YF  ++ L  +++  S L+  GIKP    Y +   K 
Sbjct: 111 WKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKD 170

Query: 431 AIQAGTGVAPLIQCSKGPFDK--FQLYQIFICVAEDAKTLIECPKP 300
           A+    GV P IQC     D+    + QI +C+ +  + L  C +P
Sbjct: 171 ALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEP 216



to top

>RNS2_SOLTU (Q01796) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 223

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVCS--GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           Q  WK  +K  G C     +   YF  A+ L+ K + L+ L + GI P    ++ +KI+ 
Sbjct: 106 QPLWKDQYKKHGTCCLPRYNQLQYFLLAMRLKEKFDLLTTLRTHGITPGTK-HTFKKIQD 164

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIEC 309
           AI+  T   P ++C +      +LY+I IC   +A +L  C
Sbjct: 165 AIKTVTQEVPDLKCVENIQGVLELYEIGICFTPEADSLFPC 205



to top

>RNS11_NICAL (Q7SID5) Ribonuclease S-F11 (EC 3.1.27.1) (Stylar glycoprotein F11)|
           (SF11-RNase)
          Length = 196

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVC--SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           Q SWK  +   G C     +   YF  A+ L+ K + L  L +  I P    Y+ + I  
Sbjct: 81  QPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIPGSS-YTFQDIFD 139

Query: 431 AIQAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKPQKFTCSDEILF 267
           AI+  +   P I+C++      +LY+I IC   +A ++  CP+      + ++LF
Sbjct: 140 AIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFRCPQSDTCDKTAKVLF 194



to top

>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 259

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGLDD-----KAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           WK  W   G C+   D     K YF  ++ L  +I+  S L   GIKP    Y L   K 
Sbjct: 115 WKHEWVKHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPSINYYQLADFKD 174

Query: 431 AIQAGTGVAPLIQC---SKGPFDKFQLYQIFICVAEDAKTLIECPKP 300
           A+    GV P IQC    +G   +  + QI +C  ++   L  C +P
Sbjct: 175 ALTRIYGVVPKIQCLMPEQGESVQ-TVGQIELCFTKEDLHLRNCTEP 220



to top

>RNS1_PYRPY (O80322) Ribonuclease S-1 precursor (EC 3.1.27.1) (S1-RNase)|
          Length = 228

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
 Frame = -3

Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIAL--RSKINPLSRLVSKGIKPDFGLYSLEKIKK 432
           W+  W   G C      DD  Y Q  I +    K N  + L    I+P+     L  I+ 
Sbjct: 109 WEKEWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNVSAILSKAAIQPNGTNRPLVDIEN 168

Query: 431 AIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP--KPQ--KFTCSDEILF 267
           AI+ GT    P  +C K      +L ++ +C   D K  I CP   PQ  +F+C   + +
Sbjct: 169 AIRRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRDLKKFINCPHGPPQGSRFSCPSSVQY 228



to top

>RNRH_RHINI (P08056) Ribonuclease Rh precursor (EC 3.1.27.1) (RNase Rh)|
          Length = 238

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
 Frame = -3

Query: 596 WKSAWKTSGVC-------------SGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL 456
           W   W   G C              G D   YFQ A+ LRS+ N      S GI P  G 
Sbjct: 118 WSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPG-GT 176

Query: 455 YSLEKIKKAIQAGTGVAPLIQCSKGPFDKFQLY 357
           Y+  +++ AI++  G    I CS G      LY
Sbjct: 177 YTATEMQSAIESYFGAKAKIDCSSGTLSDVALY 209



to top

>RNS4_ANTHI (Q38717) Ribonuclease S-4 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 4) (S4-RNase)
          Length = 233

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = -3

Query: 596 WKSAWKTSGVCS--GLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGL-YSLEKIKKAI 426
           W+  W+  G C     + + YF  A+ L+ +++ L+ L +    P     +S+ ++   I
Sbjct: 118 WQDQWRKHGSCCFPPHESEIYFLKALELKDRLDVLTILENNNFNPGTPQPFSVLRVFNTI 177

Query: 425 QAGTGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPK 303
               G  P+++C++       L ++ ICV  +  +++ CP+
Sbjct: 178 SRAIGKTPILKCAQS-----YLKEVVICVDNNGASVVHCPR 213



to top

>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)|
          Length = 180

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 23/97 (23%), Positives = 42/97 (43%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGLDDKAYFQAAIALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQAG 417
           W   W   G CSG  +  +F   ++L  + +  S L + GI+P     S + +   I   
Sbjct: 72  WSHEWSKHGTCSGYAEHDFFATVLSLYDQYDVKSALDNGGIEPGSSSVSSDSLISVITDN 131

Query: 416 TGVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECP 306
            G  P++ C    F       + +C+ ++ + L +CP
Sbjct: 132 IGGVPVLNCEGSTF-----ASVGLCITKNLE-LRDCP 162



to top

>RNS2_PYRPY (Q40965) Ribonuclease S-2 precursor (EC 3.1.27.1) (S2-RNase)|
          Length = 221

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIA--LRSKINPLSRLVSKG-IKPDFGLYSLEKIK 435
           W+  W   G C+     + K YF+  I   L  K N +SR++S   I+P+    +L +I+
Sbjct: 102 WRKQWYKHGSCASPALPNQKHYFETVIRMFLAEKQN-VSRILSMATIEPEGKNRTLLEIQ 160

Query: 434 KAIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300
            AI+AGT  + P ++C K      +L ++ +C   +    I CP+P
Sbjct: 161 NAIRAGTNNMIPKLKCQKVN-GMTELVEVTLCHDSNLTQFINCPRP 205



to top

>RNS5_PYRPY (P93460) Ribonuclease S-5 precursor (EC 3.1.27.1) (S5-RNase)|
          Length = 227

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432
           W   W   G C      ++  YF+  I +  SK   +SR++SK  I+PD    +L  I+ 
Sbjct: 108 WDKEWMKHGTCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRALLDIEN 167

Query: 431 AIQAGT-GVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300
           AI+ G     P ++C K      +L +I +C  +  +  I+CP P
Sbjct: 168 AIRNGADNKKPKLKCQKKGTTT-ELVEITLCSDKSGEHFIDCPHP 211



to top

>RNS4_PYRPY (Q40966) Ribonuclease S-4 precursor (EC 3.1.27.1) (S4-RNase)|
          Length = 228

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
 Frame = -3

Query: 596 WKSAWKTSGVCSG---LDDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432
           W+  W   G C      DD  Y +  I +  ++   +S ++SK  I+P+    SL  I+ 
Sbjct: 109 WEREWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNVSAILSKATIQPNGNNRSLVDIEN 168

Query: 431 AIQAGTG-VAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIEC----PKPQKFTCSDEILF 267
           AI++G     P  +C K      +L ++ +C   D    I C    PK  ++ C   + +
Sbjct: 169 AIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCPHGPPKGSRYFCPANVKY 228



to top

>RNS3_PYRPY (O80323) Ribonuclease S-3 precursor (EC 3.1.27.1) (S3-RNase)|
          Length = 222

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = -3

Query: 596 WKSAWKTSGVCSGL---DDKAYFQAAIALR-SKINPLSRLVSKG-IKPDFGLYSLEKIKK 432
           W   W   G C      ++  YF+  I +  SK   +SR++SK  I+PD    +L  I+ 
Sbjct: 103 WDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRALLDIEN 162

Query: 431 AIQAGT-GVAPLIQCSKGPFDKFQLYQIFICVAEDAKTLIECPKP 300
           AI+ G     P ++C K      +L +I +C  +  +  I+CP P
Sbjct: 163 AIRNGADNKKPKLKCQKKGTTT-ELVEITLCSDKSGEHFIDCPHP 206



to top

>RNL2_LENED (P81296) Ribonuclease Le2 (EC 3.1.27.1) (RNase Le2)|
          Length = 239

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
 Frame = -3

Query: 605 QKSWKSAWKTSGVC--------------SGLDDKAYFQAAIALRSKINPLSRLVSKGIKP 468
           ++ W+  W T G C               G +  A+F+  + L   +     L ++GIKP
Sbjct: 105 EELWEHEWATHGTCYSTLQTSCLPEGSPKGAEAVAFFEQVVTLFKTLPTYEWLTNQGIKP 164

Query: 467 DFG-LYSLEKIKKAIQAGTGVAPLIQCSKGPFDKFQLY 357
                ++   +  A++A  GV P + C     D+   Y
Sbjct: 165 SSSTTHTYSALTAALEAEAGVIPALNCDGSDLDEIYWY 202



to top

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 65   EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229
            E  K+ N M +   +  S  +NP  +      +Q+ + + W R P+  LR  TRR
Sbjct: 1565 ELGKQKNIMPLSAAMFLSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLRVETRR 1619



to top

>ABCX_GALSU (P35020) Probable ATP-dependent transporter ycf16|
          Length = 257

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = +3

Query: 276 LVGARELLRFRALDERFGVLGHADEDLVQLELIERPFATLDQRRHTGARLDGLLDLLQAV 455
           LVG  E   +R ++E F        +++Q+ L++   A LD+   +G  +D L D+  A+
Sbjct: 137 LVGLDESFLYRKVNEGFSGGEKKKNEILQMSLLDAKLAILDE-TDSGLDIDALQDISNAI 195

Query: 456 QAKVGLDPF 482
           ++ + +  F
Sbjct: 196 KSILKMSQF 204



to top

>ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precursor (Zona|
           pellucida sperm-binding protein B) (Zona pellucida
           glycoprotein ZP-X) (RC55)
          Length = 540

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = +1

Query: 277 SSEHVNFCGFGHSMSVLASSATQMKIWYSWNLSNGPL----LHWISG----ATPVPAWMA 432
           SSE VN C +G++++   +      I  S N+S+ PL    +H + G      PV A  A
Sbjct: 176 SSEEVNACYYGNTVTSHCTQEGHFSIAVSRNVSSPPLHLDSVHLVFGNDSECQPVVATRA 235

Query: 433 FLIF 444
           F++F
Sbjct: 236 FVLF 239



to top

>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5038

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +2

Query: 65   EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229
            E  K+ N M +   +  S  +NP  +      +Q+ + + W R P+  L+  TRR
Sbjct: 1564 ELGKQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRR 1618



to top

>ZP4_HUMAN (Q12836) Zona pellucida sperm-binding protein 4 precursor (Zona|
           pellucida sperm-binding protein B)
          Length = 540

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
 Frame = +1

Query: 277 SSEHVNFCGFGHSMSVLASSATQMKIWYSWNLSNGPL--------LHWISGATPVPAWMA 432
           SSE VN C +G+++++  +      I  S N+++ PL        L   S   PV A  A
Sbjct: 172 SSEEVNSCYYGNTVTLHCTREGHFSIAVSRNVTSPPLLLDSVRLALRNDSACNPVMATQA 231

Query: 433 FLIF 444
           F++F
Sbjct: 232 FVLF 235



to top

>RYR1_RABIT (P11716) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5037

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +2

Query: 65   EKRKEHNSMHILVRINYSLERNPQDEA*SATNLQL*LSIPWRRRPSQMLRQRTRR 229
            E  K+ N M +   +  S  +NP  +      +Q+ + + W R P+  L+  TRR
Sbjct: 1565 ELGKQKNIMPLSAAMFLSERKNPAPQCPPRLEVQMLMPVSWSRMPNHFLQVETRR 1619



to top

>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 245

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 527 IALRSKINPLSRLVSKGIKPDFGLYSLEKIKKAIQAGT-GVA 405
           I++ S IN +  +V   +   FGL S+E IKKA+  G  G+A
Sbjct: 173 ISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIA 214



to top

>KPB2_MOUSE (Q8BWJ3) Phosphorylase b kinase alpha regulatory chain, liver|
           isoform (Phosphorylase kinase alpha L subunit)
          Length = 1235

 Score = 26.6 bits (57), Expect(2) = 9.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 348 HLRGRGRQNAHRVPETAEVHVLRRDPLPPLQEVDAKAGR 232
           H++G  +++   V   A+VH +R  P   L  + AK GR
Sbjct: 450 HIKGLLKEHGMTVQSIADVHPIRVQPGRILSHIYAKLGR 488



 Score = 21.6 bits (44), Expect(2) = 9.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 512 KINPLSRLVSKGIKPD 465
           +I+PL+R  S  +KPD
Sbjct: 422 EIDPLNRRFSTSVKPD 437


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,487,945
Number of Sequences: 219361
Number of extensions: 1801556
Number of successful extensions: 6414
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6410
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7649585595
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top