ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19i05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 1334 0.0
2gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 993 0.0
3ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 731 0.0
4emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 731 0.0
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 731 0.0
6dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 731 0.0
7ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 579 e-162
8gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.039
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.039
10ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
11ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.15
13gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 46 0.15
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
16dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
17gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete... 42 2.4
18gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome... 42 2.4
19emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chr... 42 2.4
20emb|BX027057.1|CNS08T1H Single read from an extremity of a full-... 42 2.4
21emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II B... 42 2.4
22emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 2.4
23emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 42 2.4
24dbj|AK153693.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 2.4
25ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720 ... 42 2.4
26ref|NM_192143.1| Oryza sativa (japonica cultivar-group), predic... 40 9.4
27gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 9.4
28gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequ... 40 9.4
29gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 9.4
30gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein... 40 9.4
31emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic ... 40 9.4
32gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyl... 40 9.4
33emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on ch... 40 9.4
34emb|AL157945.21| Human DNA sequence from clone RP4-628J24 on chr... 40 9.4
35gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 9.4
36emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin... 40 9.4
37emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.4
38gb|AF512946.1| Homo sapiens MLL/SEPTIN6 fusion protein mRNA, par... 40 9.4
39gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.4
40dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.4
41gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence 40 9.4
42gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, comple... 40 9.4
43gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.4
44ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, c... 40 9.4
45ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, c... 40 9.4
46ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA 40 9.4
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
49gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.4
50dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
51dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
52dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 9.4
53dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.4
54dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.4
55dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
56dbj|AK111438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
57emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.4
58gb|AC004913.2|AC004913 Homo sapiens clone DJ0876A24, complete se... 40 9.4
59gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.4
60gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 9.4
61dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.4 
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
            cds
          Length = 1508

 Score = 1334 bits (673), Expect = 0.0
 Identities = 676/677 (99%)
 Strand = Plus / Minus

                                                                        
Query: 14   agtggctaacgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacg 73
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 agtggctaacgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacg 1332

                                                                        
Query: 74   ggacctagtcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtg 133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 ggacctagtcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtg 1272

                                                                        
Query: 134  gcacgtaggcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccct 193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gcacgtaggcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccct 1212

                                                                        
Query: 194  ccaccggcaggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgt 253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 ccaccggcaggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgt 1152

                                                                        
Query: 254  agaacgggatccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccg 313
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 agaacgggatcagcagccagctgtccacctcgatgttggggctcagcaccatgtccgccg 1092

                                                                        
Query: 314  cgtcggccgtcgccaccagccgctccttctccaccgcgccggagttggcgaagtcgatga 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 cgtcggccgtcgccaccagccgctccttctccaccgcgccggagttggcgaagtcgatga 1032

                                                                        
Query: 374  aggacttgaagtagccatcgttgatccgggccacctccctgctgatgagctccacggcgt 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 aggacttgaagtagccatcgttgatccgggccacctccctgctgatgagctccacggcgt 972

                                                                        
Query: 434  gcttcaccggcctggtcacgagctcccccgccgtggtggttggccgcgcccagaggatga 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  gcttcaccggcctggtcacgagctcccccgccgtggtggttggccgcgcccagaggatga 912

                                                                        
Query: 494  cgttgccggtgtatccgtccggcacctgcgggctcatccgcgctctcccgtccacggcga 553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911  cgttgccggtgtatccgtccggcacctgcgggctcatccgcgctctcccgtccacggcga 852

                                                                        
Query: 554  tggcgacgctggtggtctccccgccgtcgagcccgcgcgccatcgtcatgctccgccaca 613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  tggcgacgctggtggtctccccgccgtcgagcccgcgcgccatcgtcatgctccgccaca 792

                                                                        
Query: 614  ggtgtgccaccacgcactgcagggtgctgcagggtctgggcgcgccagccgacgcctgcg 673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  ggtgtgccaccacgcactgcagggtgctgcagggtctgggcgcgccagccgacgcctgcg 732

                             
Query: 674  ccttgagcttggagatg 690
            |||||||||||||||||
Sbjct: 731  ccttgagcttggagatg 715
to top
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
            partial cds
          Length = 1220

 Score =  993 bits (501), Expect = 0.0
 Identities = 629/669 (94%), Gaps = 2/669 (0%)
 Strand = Plus / Minus

                                                                        
Query: 22   acgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacgggacctag 81
            |||| |||||||||||| ||||||||| |||| |||||||||||| ||| ||| | ||||
Sbjct: 1116 acgtcgatccgacaccacgcacacatttgcacttggcaggtacgt-caagcgg-agctag 1059

                                                                        
Query: 82   tcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtag 141
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1058 tcgagggtgtagcagcagttcttgaaagtgttcatgtcgcggctaaagagtggcacgtag 999

                                                                        
Query: 142  gcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggc 201
            ||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 998  gcgcccacgctgccgtcgcccaagaaggacggtagcaggatgagcaggccctccaccggc 939

                                                                        
Query: 202  aggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacggg 261
            ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 938  aggtagctgggcatgaagaagaagggccggccgccgccgaggtccatgtcgtagaacggg 879

                                                                        
Query: 262  atccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878  atccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 819

                                                                        
Query: 322  gtcgccaccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttg 381
            |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 818  gtcgccaccagccgttccttctccaccgtgccggagttggcgaagtcgatgaaggacttg 759

                                                                        
Query: 382  aagtagccatcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcacc 441
            |||||||| |||||||| |||| |||||||| | ||||||||||||| |||||||||| |
Sbjct: 758  aagtagccgtcgttgatacgggacacctcccggatgatgagctccaccgcgtgcttcaac 699

                                                                        
Query: 442  ggcctggtcacgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccg 501
            ||||||| |||||| || || ||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 698  ggcctggccacgagttcacctgccgtcgtggtgggccgcgcccagaggatgacgttgcca 639

                                                                        
Query: 502  gtgtatccgtccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacg 561
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 638  gtgtatccgtccggcacctgcgggctcatccgcgctctcccgtccaccgcgatggcgacg 579

                                                                        
Query: 562  ctggtggtctccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgcc 621
            |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 578  ctggtgctctccccgccgtcgagcccgcgcgccattgtcatgctccgccacaggtgcgcc 519

                                                                        
Query: 622  accacgcactgcagggtgctgcagggtctgggcgcgccagccgacgcctgcgccttgagc 681
            ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 518  accacgcactgcagggtgctgcacggcctgggcgcgccagccgacgcctgcgccttgagc 459

                     
Query: 682  ttggagatg 690
             ||||||||
Sbjct: 458  ctggagatg 450
to top
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  731 bits (369), Expect = 0.0
 Identities = 543/601 (90%)
 Strand = Plus / Minus

                                                                        
Query: 90   gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 149
            |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1257 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1198

                                                                        
Query: 150  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 209
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1197 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1138

                                                                        
Query: 210  gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 269
            |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 1137 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1078

                                                                        
Query: 270  ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 329
            ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 1077 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1018

                                                                        
Query: 330  cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 389
            ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1017 cagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagcc 958

                                                                        
Query: 390  atcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggt 449
             ||||||||||||  |||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 957  gtcgttgatccggatcacctcccggttgatgagctccacggcgtgcttcagcggcctggt 898

                                                                        
Query: 450  cacgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatcc 509
            ||| ||||| || ||||| | |||||||||||||||||| | ||| ||||| ||||| ||
Sbjct: 897  caccagctcaccggccgtcgcggttggccgcgcccagagcacgacattgcccgtgtagcc 838

                                                                        
Query: 510  gtccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggt 569
            |||||||||| |||||||||||||||| | |||||| |||||||||   |||||||||| 
Sbjct: 837  gtccggcaccggcgggctcatccgcgcgcgcccgtcgacggcgatgcacacgctggtgga 778

                                                                        
Query: 570  ctccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgca 629
            ||| |  |||||||||||||| ||| |||||||||  ||||||||||| |||||||||||
Sbjct: 777  ctcgcgcccgtcgagcccgcgtgccttcgtcatgcatcgccacaggtgcgccaccacgca 718

                                                                        
Query: 630  ctgcagggtgctgcagggtctgggcgcgccagccgacgcctgcgccttgagcttggagat 689
            |||||| |||||| | || | | ||||||||||||||||||||| ||||||||| |||||
Sbjct: 717  ctgcagcgtgctgtacggccggtgcgcgccagccgacgcctgcgacttgagcttcgagat 658

             
Query: 690  g 690
            |
Sbjct: 657  g 657
to top
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  731 bits (369), Expect = 0.0
 Identities = 543/601 (90%)
 Strand = Plus / Minus

                                                                         
Query: 90    gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 149
             |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 11597 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 11538

                                                                         
Query: 150   gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 209
             ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 11537 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 11478

                                                                         
Query: 210   gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 269
             |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 11477 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 11418

                                                                         
Query: 270   ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 329
             ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 11417 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 11358

                                                                         
Query: 330   cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 389
             ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 11357 cagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagcc 11298

                                                                         
Query: 390   atcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggt 449
              ||||||||||||  |||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 11297 gtcgttgatccggatcacctcccggttgatgagctccacggcgtgcttcagcggcctggt 11238

                                                                         
Query: 450   cacgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatcc 509
             ||| ||||| || ||||| | |||||||||||||||||| | ||| ||||| ||||| ||
Sbjct: 11237 caccagctcaccggccgtcgcggttggccgcgcccagagcacgacattgcccgtgtagcc 11178

                                                                         
Query: 510   gtccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggt 569
             |||||||||| |||||||||||||||| | |||||| |||||||||   |||||||||| 
Sbjct: 11177 gtccggcaccggcgggctcatccgcgcgcgcccgtcgacggcgatgcacacgctggtgga 11118

                                                                         
Query: 570   ctccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgca 629
             ||| |  |||||||||||||| ||| |||||||||  ||||||||||| |||||||||||
Sbjct: 11117 ctcgcgcccgtcgagcccgcgtgccttcgtcatgcatcgccacaggtgcgccaccacgca 11058

                                                                         
Query: 630   ctgcagggtgctgcagggtctgggcgcgccagccgacgcctgcgccttgagcttggagat 689
             |||||| |||||| | || | | ||||||||||||||||||||| ||||||||| |||||
Sbjct: 11057 ctgcagcgtgctgtacggccggtgcgcgccagccgacgcctgcgacttgagcttcgagat 10998

              
Query: 690   g 690
             |
Sbjct: 10997 g 10997



 Score =  579 bits (292), Expect = e-162
 Identities = 487/552 (88%)
 Strand = Plus / Plus

                                                                         
Query: 91    tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 150
             |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 13909 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 13968

                                                                         
Query: 151   ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 210
             |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 13969 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 14028

                                                                         
Query: 211   ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 270
             ||| |||| | ||||||| | |||| ||||||||| |  |||||||||||||||||||||
Sbjct: 14029 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 14088

                                                                         
Query: 271   cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 330
             |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 14089 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 14148

                                                                         
Query: 331   agccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcca 390
             |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| 
Sbjct: 14149 agccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagccg 14208

                                                                         
Query: 391   tcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggtc 450
             ||||||||||| |||||| ||| | |||||||  |||  ||||||| || |||| |||||
Sbjct: 14209 tcgttgatccgtgccaccgcccggttgatgagacccatcgcgtgctgcagcggcatggtc 14268

                                                                         
Query: 451   acgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatccg 510
             |||||||||| ||| |||| ||| ||||| |||||||| | ||||||||| ||||| || 
Sbjct: 14269 acgagctcccgcgcggtggcggtcggccgtgcccagagcacgacgttgcccgtgtagcca 14328

                                                                         
Query: 511   tccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggtc 570
             ||| ||||| |||||||||||||||| | |||||||||||||||||  ||||| |||| |
Sbjct: 14329 tccagcaccggcgggctcatccgcgcgcgcccgtccacggcgatggacacgctcgtggcc 14388

                                                                         
Query: 571   tccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgcac 630
              | |  || ||||||||||| |||||||| ||||  ||||||||||| ||||||||||||
Sbjct: 14389 acgctcccctcgagcccgcgagccatcgttatgcagcgccacaggtgcgccaccacgcac 14448

                         
Query: 631   tgcagggtgctg 642
             ||||||||||||
Sbjct: 14449 tgcagggtgctg 14460



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 661   gccgacgcctgcgccttgagcttggagatg 690
             ||||||||  ||||||||||||||||||||
Sbjct: 14482 gccgacgcgagcgccttgagcttggagatg 14511
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  731 bits (369), Expect = 0.0
 Identities = 543/601 (90%)
 Strand = Plus / Minus

                                                                            
Query: 90       gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 149
                |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 33960700 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 33960641

                                                                            
Query: 150      gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 209
                ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 33960640 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 33960581

                                                                            
Query: 210      gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 269
                |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 33960580 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 33960521

                                                                            
Query: 270      ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 329
                ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 33960520 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 33960461

                                                                            
Query: 330      cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 389
                ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 33960460 cagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagcc 33960401

                                                                            
Query: 390      atcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggt 449
                 ||||||||||||  |||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 33960400 gtcgttgatccggatcacctcccggttgatgagctccacggcgtgcttcagcggcctggt 33960341

                                                                            
Query: 450      cacgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatcc 509
                ||| ||||| || ||||| | |||||||||||||||||| | ||| ||||| ||||| ||
Sbjct: 33960340 caccagctcaccggccgtcgcggttggccgcgcccagagcacgacattgcccgtgtagcc 33960281

                                                                            
Query: 510      gtccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggt 569
                |||||||||| |||||||||||||||| | |||||| |||||||||   |||||||||| 
Sbjct: 33960280 gtccggcaccggcgggctcatccgcgcgcgcccgtcgacggcgatgcacacgctggtgga 33960221

                                                                            
Query: 570      ctccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgca 629
                ||| |  |||||||||||||| ||| |||||||||  ||||||||||| |||||||||||
Sbjct: 33960220 ctcgcgcccgtcgagcccgcgtgccttcgtcatgcatcgccacaggtgcgccaccacgca 33960161

                                                                            
Query: 630      ctgcagggtgctgcagggtctgggcgcgccagccgacgcctgcgccttgagcttggagat 689
                |||||| |||||| | || | | ||||||||||||||||||||| ||||||||| |||||
Sbjct: 33960160 ctgcagcgtgctgtacggccggtgcgcgccagccgacgcctgcgacttgagcttcgagat 33960101

                 
Query: 690      g 690
                |
Sbjct: 33960100 g 33960100



 Score =  579 bits (292), Expect = e-162
 Identities = 487/552 (88%)
 Strand = Plus / Plus

                                                                            
Query: 91       tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 150
                |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 33963012 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 33963071

                                                                            
Query: 151      ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 210
                |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 33963072 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 33963131

                                                                            
Query: 211      ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 270
                ||| |||| | ||||||| | |||| ||||||||| |  |||||||||||||||||||||
Sbjct: 33963132 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 33963191

                                                                            
Query: 271      cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 330
                |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 33963192 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 33963251

                                                                            
Query: 331      agccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcca 390
                |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| 
Sbjct: 33963252 agccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagccg 33963311

                                                                            
Query: 391      tcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggtc 450
                ||||||||||| |||||| ||| | |||||||  |||  ||||||| || |||| |||||
Sbjct: 33963312 tcgttgatccgtgccaccgcccggttgatgagacccatcgcgtgctgcagcggcatggtc 33963371

                                                                            
Query: 451      acgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatccg 510
                |||||||||| ||| |||| ||| ||||| |||||||| | ||||||||| ||||| || 
Sbjct: 33963372 acgagctcccgcgcggtggcggtcggccgtgcccagagcacgacgttgcccgtgtagcca 33963431

                                                                            
Query: 511      tccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggtc 570
                ||| ||||| |||||||||||||||| | |||||||||||||||||  ||||| |||| |
Sbjct: 33963432 tccagcaccggcgggctcatccgcgcgcgcccgtccacggcgatggacacgctcgtggcc 33963491

                                                                            
Query: 571      tccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgcac 630
                 | |  || ||||||||||| |||||||| ||||  ||||||||||| ||||||||||||
Sbjct: 33963492 acgctcccctcgagcccgcgagccatcgttatgcagcgccacaggtgcgccaccacgcac 33963551

                            
Query: 631      tgcagggtgctg 642
                ||||||||||||
Sbjct: 33963552 tgcagggtgctg 33963563



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 661      gccgacgcctgcgccttgagcttggagatg 690
                ||||||||  ||||||||||||||||||||
Sbjct: 33963585 gccgacgcgagcgccttgagcttggagatg 33963614
to top
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
            insert sequence
          Length = 1640

 Score =  731 bits (369), Expect = 0.0
 Identities = 543/601 (90%)
 Strand = Plus / Minus

                                                                        
Query: 90   gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 149
            |||||||||||||||||||  || |||||||||||| |||||||||||||| ||||| ||
Sbjct: 1411 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1352

                                                                        
Query: 150  gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 209
            ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1351 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1292

                                                                        
Query: 210  gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 269
            |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 1291 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1232

                                                                        
Query: 270  ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 329
            ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 1231 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1172

                                                                        
Query: 330  cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 389
            ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1171 cagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagcc 1112

                                                                        
Query: 390  atcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggt 449
             ||||||||||||  |||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 1111 gtcgttgatccggatcacctcccggttgatgagctccacggcgtgcttcagcggcctggt 1052

                                                                        
Query: 450  cacgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatcc 509
            ||| ||||| || ||||| | |||||||||||||||||| | ||| ||||| ||||| ||
Sbjct: 1051 caccagctcaccggccgtcgcggttggccgcgcccagagcacgacattgcccgtgtagcc 992

                                                                        
Query: 510  gtccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggt 569
            |||||||||| |||||||||||||||| | |||||| |||||||||   |||||||||| 
Sbjct: 991  gtccggcaccggcgggctcatccgcgcgcgcccgtcgacggcgatgcacacgctggtgga 932

                                                                        
Query: 570  ctccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgca 629
            ||| |  |||||||||||||| ||| |||||||||  ||||||||||| |||||||||||
Sbjct: 931  ctcgcgcccgtcgagcccgcgtgccttcgtcatgcatcgccacaggtgcgccaccacgca 872

                                                                        
Query: 630  ctgcagggtgctgcagggtctgggcgcgccagccgacgcctgcgccttgagcttggagat 689
            |||||| |||||| | || | | ||||||||||||||||||||| ||||||||| |||||
Sbjct: 871  ctgcagcgtgctgtacggccggtgcgcgccagccgacgcctgcgacttgagcttcgagat 812

             
Query: 690  g 690
            |
Sbjct: 811  g 811
to top
>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score =  579 bits (292), Expect = e-162
 Identities = 487/552 (88%)
 Strand = Plus / Minus

                                                                        
Query: 91   tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 150
            |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||
Sbjct: 1328 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 1269

                                                                        
Query: 151  ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 210
            |||||||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 1268 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 1209

                                                                        
Query: 211  ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 270
            ||| |||| | ||||||| | |||| ||||||||| |  |||||||||||||||||||||
Sbjct: 1208 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 1149

                                                                        
Query: 271  cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 330
            |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 1148 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 1089

                                                                        
Query: 331  agccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcca 390
            |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| 
Sbjct: 1088 agccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagccg 1029

                                                                        
Query: 391  tcgttgatccgggccacctccctgctgatgagctccacggcgtgcttcaccggcctggtc 450
            ||||||||||| |||||| ||| | |||||||  |||  ||||||| || |||| |||||
Sbjct: 1028 tcgttgatccgtgccaccgcccggttgatgagacccatcgcgtgctgcagcggcatggtc 969

                                                                        
Query: 451  acgagctcccccgccgtggtggttggccgcgcccagaggatgacgttgccggtgtatccg 510
            |||||||||| ||| |||| ||| ||||| |||||||| | ||||||||| ||||| || 
Sbjct: 968  acgagctcccgcgcggtggcggtcggccgtgcccagagcacgacgttgcccgtgtagcca 909

                                                                        
Query: 511  tccggcacctgcgggctcatccgcgctctcccgtccacggcgatggcgacgctggtggtc 570
            ||| ||||| |||||||||||||||| | |||||||||||||||||  ||||| |||| |
Sbjct: 908  tccagcaccggcgggctcatccgcgcgcgcccgtccacggcgatggacacgctcgtggcc 849

                                                                        
Query: 571  tccccgccgtcgagcccgcgcgccatcgtcatgctccgccacaggtgtgccaccacgcac 630
             | |  || ||||||||||| |||||||| ||||  ||||||||||| ||||||||||||
Sbjct: 848  acgctcccctcgagcccgcgagccatcgttatgcagcgccacaggtgcgccaccacgcac 789

                        
Query: 631  tgcagggtgctg 642
            ||||||||||||
Sbjct: 788  tgcagggtgctg 777



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 661 gccgacgcctgcgccttgagcttggagatg 690
           ||||||||  ||||||||||||||||||||
Sbjct: 755 gccgacgcgagcgccttgagcttggagatg 726
to top
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 232   ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 291
             |||||||||||||| |  ||||||||   ||| | |||||||||||||||||||| ||  
Sbjct: 76714 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcgacgtcc 76773

                         
Query: 292   gggctcagcacc 303
             |||| |||||||
Sbjct: 76774 gggcacagcacc 76785
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 232    ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 291
              |||||||||||||| |  ||||||||   ||| | |||||||||||||||||||| ||  
Sbjct: 872290 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcgacgtcc 872349

                          
Query: 292    gggctcagcacc 303
              |||| |||||||
Sbjct: 872350 gggcacagcacc 872361
to top
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1359

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 291
            |||||||||||||| |  |||||||||||||     ||||||||||||||||| | || |
Sbjct: 1205 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 1146

                       
Query: 292  gggctcagcac 302
            |||| ||||||
Sbjct: 1145 gggcacagcac 1135
to top
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 127  aagagtggcacgtaggcgtccacgctgccgtcgcc 161
            ||||||||||||||| |||| | ||||||||||||
Sbjct: 1340 aagagtggcacgtagacgtcgatgctgccgtcgcc 1306



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 232  ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 289
            |||||||||||||| | |||||||||    || | |||||||||||||||||| ||||
Sbjct: 1235 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 1178
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 127      aagagtggcacgtaggcgtccacgctgccgtcgcc 161
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 26918691 aagagtggcacgtagacgtcgatgctgccgtcgcc 26918657



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 232      ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 289
                |||||||||||||| | |||||||||    || | |||||||||||||||||| ||||
Sbjct: 26918586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 26918529
to top
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 127   aagagtggcacgtaggcgtccacgctgccgtcgcc 161
             ||||||||||||||| |||| | ||||||||||||
Sbjct: 97691 aagagtggcacgtagacgtcgatgctgccgtcgcc 97657



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 232   ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 289
             |||||||||||||| | |||||||||    || | |||||||||||||||||| ||||
Sbjct: 97586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 97529
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 232      ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 291
                |||||||||||||| |  |||||||||||||     ||||||||||||||||| | || |
Sbjct: 21163512 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 21163453

                           
Query: 292      gggctcagcac 302
                |||| ||||||
Sbjct: 21163452 gggcacagcac 21163442
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 127      aagagtggcacgtaggcgtccacgctgccgtcgcc 161
                ||||||||||||||| |||| | ||||||||||||
Sbjct: 27010014 aagagtggcacgtagacgtcgatgctgccgtcgcc 27009980



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 232      ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 289
                |||||||||||||| | |||||||||    || | |||||||||||||||||| ||||
Sbjct: 27009909 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 27009852
to top
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0705E11
          Length = 140729

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 232   ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 291
             |||||||||||||| |  |||||||||||||     ||||||||||||||||| | || |
Sbjct: 34269 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 34210

                        
Query: 292   gggctcagcac 302
             |||| ||||||
Sbjct: 34209 gggcacagcac 34199
to top
>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence
          Length = 154344

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 608   gccacaggtgtgccaccacgc 628
             |||||||||||||||||||||
Sbjct: 90379 gccacaggtgtgccaccacgc 90359
to top
>gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome 7, complete sequence
          Length = 190059

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 590   gcgccatcgtcatgctccgcc 610
             |||||||||||||||||||||
Sbjct: 88150 gcgccatcgtcatgctccgcc 88130
to top
>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the
             5' end of the RSU1 gene for Ras suppressor protein 1, the
             3' end of the CUBN gene for cubilin (intrinsic
             factor-cobalamin receptor) and a CpG island, complete
             sequence
          Length = 184703

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 282   ctcgatgttggggctcagcac 302
             |||||||||||||||||||||
Sbjct: 51790 ctcgatgttggggctcagcac 51810
to top
>emb|BX027057.1|CNS08T1H Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA40CC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 279

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 313 gcgtcggccgtcgccaccagc 333
           |||||||||||||||||||||
Sbjct: 131 gcgtcggccgtcgccaccagc 111
to top
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10
          Length = 99967

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 14    agtggctaacgttgatccgacacca 38
             |||||||||||| ||||||||||||
Sbjct: 33123 agtggctaacgtcgatccgacacca 33147
to top
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 561    gctggtggtctccccgccgtcgagc 585
              ||||||||||||| |||||||||||
Sbjct: 128060 gctggtggtctccacgccgtcgagc 128084
to top
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
              complete sequence
          Length = 169168

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 319    gccgtcgccaccagccgctcc 339
              |||||||||||||||||||||
Sbjct: 100054 gccgtcgccaccagccgctcc 100074
to top
>dbj|AK153693.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630048N10 product:unclassifiable, full
            insert sequence
          Length = 4685

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 590  gcgccatcgtcatgctccgcc 610
            |||||||||||||||||||||
Sbjct: 3456 gcgccatcgtcatgctccgcc 3436
to top
>ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720
           (ENSANGG00000015231), partial mRNA
          Length = 966

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 313 gcgtcggccgtcgccaccagc 333
           |||||||||||||||||||||
Sbjct: 820 gcgtcggccgtcgccaccagc 840
to top
>ref|NM_192143.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 339

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 668 cctgcgccttgagcttggag 687
           ||||||||||||||||||||
Sbjct: 226 cctgcgccttgagcttggag 207
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 579    gtcgagcccgcgcgccatcg 598
              ||||||||||||||||||||
Sbjct: 166000 gtcgagcccgcgcgccatcg 165981
to top
>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence
          Length = 37154

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  caagaaagacggcagcagga 181
            ||||||||||||||||||||
Sbjct: 2399 caagaaagacggcagcagga 2418
to top
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the
            complete plasmid sequence
          Length = 10943

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  tcggccgtcgccaccagccg 335
            ||||||||||||||||||||
Sbjct: 2761 tcggccgtcgccaccagccg 2742
to top
>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete
           cds
          Length = 2068

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 caagaaagacggcagcagga 181
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391
to top
>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase
          Length = 1486

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 caccatgtccgccgcgtcgg 319
           ||||||||||||||||||||
Sbjct: 335 caccatgtccgccgcgtcgg 316
to top
>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT)
           gene, complete cds
          Length = 2012

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 caccatgtccgccgcgtcgg 319
           ||||||||||||||||||||
Sbjct: 231 caccatgtccgccgcgtcgg 212
to top
>emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on chromosome Xq25-27.1
             Contains the 3' end of a novel gene, a serine/arginine
             repetitive matrix 1 (SRRM1) pseudogene (LOC347480), the
             GPR101 gene for G protein-coupled receptor 101 and four
             CpG islands, complete sequence
          Length = 172280

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   ccacaggtgtgccaccacgc 628
             ||||||||||||||||||||
Sbjct: 33884 ccacaggtgtgccaccacgc 33865
to top
>emb|AL157945.21| Human DNA sequence from clone RP4-628J24 on chromosome 1p36.31-36.33
            Contains the 3' end of a novel gene and a novel gene,
            complete sequence
          Length = 39094

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 609  ccacaggtgtgccaccacgc 628
            ||||||||||||||||||||
Sbjct: 1889 ccacaggtgtgccaccacgc 1908
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 574     ccgccgtcgagcccgcgcgccatc 597
               |||||||||||||| |||||||||
Sbjct: 2589475 ccgccgtcgagcccacgcgccatc 2589498
to top
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain
             DSM 40236
          Length = 90600

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ccgcgccggagttggcgaag 366
             ||||||||||||||||||||
Sbjct: 67462 ccgcgccggagttggcgaag 67443
to top
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24
          Length = 314450

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   ttgaagtagccatcgttgat 398
             ||||||||||||||||||||
Sbjct: 74867 ttgaagtagccatcgttgat 74886
to top
>gb|AF512946.1| Homo sapiens MLL/SEPTIN6 fusion protein mRNA, partial cds
          Length = 1770

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaatagaactggcagtggct 20
            ||||||||||||||||||||
Sbjct: 1740 aaatagaactggcagtggct 1759
to top
>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 328
            of 460 of the complete genome
          Length = 13708

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 638  tgctgcagggtctgggcgcg 657
            ||||||||||||||||||||
Sbjct: 7818 tgctgcagggtctgggcgcg 7837
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 636     ggtgctgcagggtctgggcg 655
               ||||||||||||||||||||
Sbjct: 4462748 ggtgctgcagggtctgggcg 4462729
to top
>gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence
          Length = 177756

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   ccacaggtgtgccaccacgc 628
             ||||||||||||||||||||
Sbjct: 60869 ccacaggtgtgccaccacgc 60888
to top
>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 609  ccacaggtgtgccaccacgc 628
            ||||||||||||||||||||
Sbjct: 9266 ccacaggtgtgccaccacgc 9285
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 638     tgctgcagggtctgggcgcg 657
               ||||||||||||||||||||
Sbjct: 1329214 tgctgcagggtctgggcgcg 1329195
to top
>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds
          Length = 1518

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 caagaaagacggcagcagga 181
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656
to top
>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 caagaaagacggcagcagga 181
           ||||||||||||||||||||
Sbjct: 637 caagaaagacggcagcagga 656
to top
>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 caagaaagacggcagcagga 181
           ||||||||||||||||||||
Sbjct: 372 caagaaagacggcagcagga 391
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 308      ccgccgcgtcggccgtcgccacca 331
                ||||||||||| ||||||||||||
Sbjct: 29600703 ccgccgcgtcgcccgtcgccacca 29600726
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 668      cctgcgccttgagcttggag 687
                ||||||||||||||||||||
Sbjct: 28532354 cctgcgccttgagcttggag 28532373
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 340     ttctccaccgcgccggagttggcg 363
               |||||||||||||||||| |||||
Sbjct: 3905736 ttctccaccgcgccggaggtggcg 3905713
to top
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C09
          Length = 170226

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 668   cctgcgccttgagcttggag 687
             ||||||||||||||||||||
Sbjct: 58793 cctgcgccttgagcttggag 58812
to top
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1663_H12
          Length = 125422

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   ccgccgcgtcggccgtcgccacca 331
             ||||||||||| ||||||||||||
Sbjct: 44288 ccgccgcgtcgcccgtcgccacca 44311
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 558     gacgctggtggtctccccgc 577
               ||||||||||||||||||||
Sbjct: 2494449 gacgctggtggtctccccgc 2494430
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     ccgcgccggagttggcgaag 366
               ||||||||||||||||||||
Sbjct: 5074056 ccgcgccggagttggcgaag 5074037



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    cggcgatggcgacgctggtg 567
              ||||||||||||||||||||
Sbjct: 971966 cggcgatggcgacgctggtg 971985
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 482     cccagaggatgacgttgccggtgt 505
               |||||| |||||||||||||||||
Sbjct: 1691798 cccagacgatgacgttgccggtgt 1691821
to top
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 308    ccgccgcgtcggccgtcgccacca 331
              ||||||||||| ||||||||||||
Sbjct: 165209 ccgccgcgtcgcccgtcgccacca 165232
to top
>dbj|AK111438.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A04, full
            insert sequence
          Length = 1587

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 668  cctgcgccttgagcttggag 687
            ||||||||||||||||||||
Sbjct: 983  cctgcgccttgagcttggag 1002
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 508    ccgtccggcacctgcgggct 527
              ||||||||||||||||||||
Sbjct: 914634 ccgtccggcacctgcgggct 914615
to top
>gb|AC004913.2|AC004913 Homo sapiens clone DJ0876A24, complete sequence
          Length = 98870

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaatagaactggcagtggct 20
             ||||||||||||||||||||
Sbjct: 64070 aaatagaactggcagtggct 64051
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 661    gccgacgcctgcgccttgagcttg 684
              |||||||||||| |||||||||||
Sbjct: 249819 gccgacgcctgctccttgagcttg 249842
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 362     cgaagtcgatgaaggacttgaagt 385
               |||||| |||||||||||||||||
Sbjct: 1462631 cgaagtagatgaaggacttgaagt 1462654
to top
>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete
             sequences
          Length = 174074

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aggcacacattggcacatgg 57
             ||||||||||||||||||||
Sbjct: 72264 aggcacacattggcacatgg 72245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,790,771
Number of Sequences: 3902068
Number of extensions: 4790771
Number of successful extensions: 118588
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 116186
Number of HSP's gapped (non-prelim): 2395
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top