ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19i03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33 216 7e-53
2gb|AY105151.1| Zea mays PCO072293 mRNA sequence 216 7e-53
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
4dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 5e-35
6gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial ... 96 2e-16
7ref|XM_467846.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
12emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35 78 4e-11
13gb|AY105105.1| Zea mays PCO122403 mRNA sequence 78 4e-11
14gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, comple... 46 0.14
15gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 1... 44 0.54
16emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chro... 44 0.54
17emb|BX322542.23| Zebrafish DNA sequence from clone CH211-214I13 ... 42 2.1
18emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chr... 42 2.1
19dbj|AK172422.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.1
20dbj|AK089650.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 2.1
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.1
22gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, comp... 42 2.1
23gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, comp... 42 2.1
24gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.1
25emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 42 2.1
26gb|AC141632.4| Mus musculus BAC clone RP24-100G24 from 3, comple... 42 2.1
27gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 8.4
28gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21... 40 8.4
29gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, co... 40 8.4
30gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosom... 40 8.4
31gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosom... 40 8.4
32emb|Z73974.1|CEF29F11 Caenorhabditis elegans Cosmid F29F11, comp... 40 8.4
33gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, comp... 40 8.4
34ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.4
35gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple... 40 8.4
36gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, comple... 40 8.4
37emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chro... 40 8.4
38emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 ... 40 8.4
39emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 i... 40 8.4
40gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold 40 8.4
41gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold 40 8.4
42emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in... 40 8.4
43emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 i... 40 8.4
44dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 8.4
45gb|AY634306.1| Caenorhabditis briggsae strain AF16 gsa-1 gene, c... 40 8.4
46emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 i... 40 8.4
47emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chro... 40 8.4
48gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, comple... 40 8.4
49dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC c... 40 8.4 
>emb|X98244.2|ZMANNP33 Z.mays mRNA for annexin p33
          Length = 1277

 Score =  216 bits (109), Expect = 7e-53
 Identities = 238/281 (84%)
 Strand = Plus / Minus

                                                                        
Query: 337  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 396
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1029 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 970

                                                                        
Query: 397  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 456
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 969  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 910

                                                                        
Query: 457  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 516
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 909  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 850

                                                                        
Query: 517  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 576
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 849  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 790

                                                     
Query: 577  aaccgcccgcagggttttgaggaactcatccttggggtcag 617
             | ||||||||| ||| ||||| |||| |||| ||||||||
Sbjct: 789  gatcgcccgcagcgttctgaggtactcgtcctgggggtcag 749
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>gb|AY105151.1| Zea mays PCO072293 mRNA sequence
          Length = 1369

 Score =  216 bits (109), Expect = 7e-53
 Identities = 238/281 (84%)
 Strand = Plus / Minus

                                                                        
Query: 337  tcactccttccccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgc 396
            |||||||| ||||||||| || ||||||||| |||||||||||||||||||||| || ||
Sbjct: 1046 tcactcctgccccaggagcgcgaggagcatgctctcgtagtcgccggaggtgtcccccgc 987

                                                                        
Query: 397  gacggccttctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcag 456
            |||||||  |||||  || || ||||||||||||||||| ||||| || ||||| || ||
Sbjct: 986  gacggcccgctccagcggcacgctgttcctcttctggtacgcctccttaatcagtttgag 927

                                                                        
Query: 457  gtccacctcggcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccc 516
            ||||||||| |||||||| || |||||||| || |||||||||||||| || ||   |||
Sbjct: 926  gtccacctcagcgcgggtggtgatgaccctggtcagggagttctcatctgtgcctagccc 867

                                                                        
Query: 517  tgcaatggccaacctggcaaccttctcaaagtacctatcagggcaggtgaagcaccggat 576
             || ||||||  ||| || ||||||||||||||||| ||||||||  |||||||||||||
Sbjct: 866  cgctatggcctgcctagccaccttctcaaagtacctgtcagggcaactgaagcaccggat 807

                                                     
Query: 577  aaccgcccgcagggttttgaggaactcatccttggggtcag 617
             | ||||||||| ||| ||||| |||| |||| ||||||||
Sbjct: 806  gatcgcccgcagcgttctgaggtactcgtcctgggggtcag 766
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                           
Query: 347     cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 406
               ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 6264287 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 6264228

                                                                           
Query: 407     tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 466
               ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 6264227 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 6264168

                                                                           
Query: 467     gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 526
               || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 6264167 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 6264108

                                                  
Query: 527     aacctggcaaccttctcaaagtacctatcagggca 561
               ||||||   || ||||| |||||||| ||||||||
Sbjct: 6264107 aacctgatgactttctcgaagtacctgtcagggca 6264073
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>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0516A04
          Length = 145107

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                         
Query: 347   cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 406
             ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 58363 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 58304

                                                                         
Query: 407   tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 466
             ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 58303 tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 58244

                                                                         
Query: 467   gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 526
             || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 58243 gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 58184

                                                
Query: 527   aacctggcaaccttctcaaagtacctatcagggca 561
             ||||||   || ||||| |||||||| ||||||||
Sbjct: 58183 aacctgatgactttctcgaagtacctgtcagggca 58149
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>dbj|AK072559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A10, full
            insert sequence
          Length = 1274

 Score =  157 bits (79), Expect = 5e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                        
Query: 347  cccaggagggcaaggagcatggtctcgtagtcgccggaggtgtcgcctgcgacggccttc 406
            ||||| || ||||| |||||  |||||||||| ||||||||||| |||||||| ||   |
Sbjct: 1036 cccagaagagcaagaagcatcctctcgtagtccccggaggtgtcccctgcgaccgcacgc 977

                                                                        
Query: 407  tccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcg 466
            ||||  ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||
Sbjct: 976  tccagcgggacactgttcctcttctggtacgcctccgtgatcagcttcagatccacctcg 917

                                                                        
Query: 467  gcgcgggtcgttatgaccctagtgagggagttctcatcggttccattccctgcaatggcc 526
            || || || || |||| |||||||||||||||||| || |||||  | ||||| ||||||
Sbjct: 916  gcacgagtggtaatgatcctagtgagggagttctcgtctgttcccatgcctgcgatggcc 857

                                               
Query: 527  aacctggcaaccttctcaaagtacctatcagggca 561
            ||||||   || ||||| |||||||| ||||||||
Sbjct: 856  aacctgatgactttctcgaagtacctgtcagggca 822
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>gb|AF542967.1| Triticum aestivum annexin P35-like mRNA, partial sequence
          Length = 766

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 166/204 (81%), Gaps = 1/204 (0%)
 Strand = Plus / Minus

                                                                       
Query: 413 gggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgg 472
           ||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||||||| 
Sbjct: 636 gggacgctgttcctcttctggtacgcctcctttatcaccttcaggtccacctcggcgcga 577

                                                                       
Query: 473 gtcgttatgaccctagt-gagggagttctcatcggttccattccctgcaatggccaacct 531
           || ||||||||||| ||  |||| |||||| || || ||    ||| ||| |||||||| 
Sbjct: 576 gtggttatgaccctcgtaaagggtgttctcgtctgtgccgacgcctccaagggccaaccg 517

                                                                       
Query: 532 ggcaaccttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggt 591
           |   | |||||||||||| || |||||||| ||||| ||||  || | ||||| ||||||
Sbjct: 516 gatgatcttctcaaagtatctgtcagggcaagtgaaacaccttatgatcgccctcagggt 457

                                   
Query: 592 tttgaggaactcatccttggggtc 615
           |  ||||||||| | |||||||||
Sbjct: 456 tgagaggaactcgttcttggggtc 433
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>ref|XM_467846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1223

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 406 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 465
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 466 ggcgcgggtcgttatgaccctagtgagggagttctc 501
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 539 ttctcaaagtacctatcagggcaggtgaagca 570
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                            
Query: 406      ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 465
                |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 31716929 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 31716988

                                                    
Query: 466      ggcgcgggtcgttatgaccctagtgagggagttctc 501
                ||| || || ||||||| ||| || || ||||||||
Sbjct: 31716989 ggcacgagttgttatgatccttgtaagagagttctc 31717024



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 539      ttctcaaagtacctatcagggcaggtgaagca 570
                ||||||||||| || |||||||| ||||||||
Sbjct: 31717062 ttctcaaagtatctgtcagggcaagtgaagca 31717093
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>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0627E03
          Length = 159861

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 406   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 465
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 12727 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 12786

                                                 
Query: 466   ggcgcgggtcgttatgaccctagtgagggagttctc 501
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 12787 ggcacgagttgttatgatccttgtaagagagttctc 12822



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 539   ttctcaaagtacctatcagggcaggtgaagca 570
             ||||||||||| || |||||||| ||||||||
Sbjct: 12860 ttctcaaagtatctgtcagggcaagtgaagca 12891
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>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 406   ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 465
             |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 96716 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 96775

                                                 
Query: 466   ggcgcgggtcgttatgaccctagtgagggagttctc 501
             ||| || || ||||||| ||| || || ||||||||
Sbjct: 96776 ggcacgagttgttatgatccttgtaagagagttctc 96811



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 539   ttctcaaagtacctatcagggcaggtgaagca 570
             ||||||||||| || |||||||| ||||||||
Sbjct: 96849 ttctcaaagtatctgtcagggcaagtgaagca 96880
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>dbj|AK101787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065F07, full
           insert sequence
          Length = 1223

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 406 ctccaaggggacactgttcctcttctggtatgcctctttgatcagcttcaggtccacctc 465
           |||||| ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||
Sbjct: 991 ctccaatgggacactgtttctcttctggtaggcctcctttatcagcttcaggtctacctc 932

                                               
Query: 466 ggcgcgggtcgttatgaccctagtgagggagttctc 501
           ||| || || ||||||| ||| || || ||||||||
Sbjct: 931 ggcacgagttgttatgatccttgtaagagagttctc 896



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 539 ttctcaaagtacctatcagggcaggtgaagca 570
           ||||||||||| || |||||||| ||||||||
Sbjct: 858 ttctcaaagtatctgtcagggcaagtgaagca 827
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>emb|X98245.1|ZMANNP35 Z.mays mRNA for annexin p35
          Length = 1257

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 539 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 598
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 874 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 815

                              
Query: 599 aactcatccttggggtcag 617
           |||||||||||||||||||
Sbjct: 814 aactcatccttggggtcag 796



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 475
           |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 997 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 938

                             
Query: 476 gttatgaccctagtgagg 493
           |||| |||||| ||||||
Sbjct: 937 gttacgaccctggtgagg 920
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>gb|AY105105.1| Zea mays PCO122403 mRNA sequence
          Length = 1401

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 539 ttctcaaagtacctatcagggcaggtgaagcaccggataaccgcccgcagggttttgagg 598
           ||||| ||||| || ||||||||||||||||||||||| | ||||||||| |||   || 
Sbjct: 968 ttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaaga 909

                              
Query: 599 aactcatccttggggtcag 617
           |||||||||||||||||||
Sbjct: 908 aactcatccttggggtcag 890



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 416  acactgttcctcttctggtatgcctctttgatcagcttcaggtccacctcggcgcgggtc 475
            |||||||| |||||||| || ||||| || |||||||||||||| ||||||||||| || 
Sbjct: 1091 acactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcgagta 1032

                              
Query: 476  gttatgaccctagtgagg 493
            |||| |||||| ||||||
Sbjct: 1031 gttacgaccctggtgagg 1014
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>gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, complete sequence
          Length = 64256

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 18    tctttaaaagatttaggaactga 40
             |||||||||||||||||||||||
Sbjct: 34964 tctttaaaagatttaggaactga 34942
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>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence
          Length = 177964

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 142    tgaacatctaagctagtacaaa 163
              ||||||||||||||||||||||
Sbjct: 121419 tgaacatctaagctagtacaaa 121440
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>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete
             sequence
          Length = 214061

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    ttctccctctttaaaagattta 32
             ||||||||||||||||||||||
Sbjct: 99806 ttctccctctttaaaagattta 99785
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>emb|BX322542.23| Zebrafish DNA sequence from clone CH211-214I13 in linkage group 7,
             complete sequence
          Length = 59593

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ttcaattcaagcaaaatacag 70
             |||||||||||||||||||||
Sbjct: 55712 ttcaattcaagcaaaatacag 55732
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>emb|AL512641.9| Human DNA sequence from clone RP11-139J15 on chromosome 10 Contains the
              5' end of a novel gene (LOC221078) (FLJ23743), two novel
              genes, the gene for ADP-ribosylation-like factor 8 (ARL8),
              a programmed cell death 8 (apoptosis-inducing factor)
              (PDCD8) pseudogene and a CpG island, complete sequence
          Length = 172688

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     cagatgcaattcagatttttc 88
              |||||||||||||||||||||
Sbjct: 154076 cagatgcaattcagatttttc 154056
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>dbj|AK172422.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830206O22 product:unclassifiable, full
            insert sequence
          Length = 2363

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   atttttcaggcttacagaaaa 102
            |||||||||||||||||||||
Sbjct: 1711 atttttcaggcttacagaaaa 1691
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>dbj|AK089650.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830007A21 product:unclassifiable, full
            insert sequence
          Length = 2363

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   atttttcaggcttacagaaaa 102
            |||||||||||||||||||||
Sbjct: 1711 atttttcaggcttacagaaaa 1691
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 378     cgccggaggtgtcgcctgcgacggc 402
               |||||||||||||||| ||||||||
Sbjct: 4911239 cgccggaggtgtcgcccgcgacggc 4911263
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>gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, complete sequence
          Length = 200020

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   gtaaagcacacctctctctat 209
             |||||||||||||||||||||
Sbjct: 67083 gtaaagcacacctctctctat 67103
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>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     atttttcaggcttacagaaaa 102
              |||||||||||||||||||||
Sbjct: 189863 atttttcaggcttacagaaaa 189843
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 457    gtccacctcggcgcgggtcgt 477
              |||||||||||||||||||||
Sbjct: 497372 gtccacctcggcgcgggtcgt 497352
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>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    cagaaaactcacttttttaac 116
             |||||||||||||||||||||
Sbjct: 25467 cagaaaactcacttttttaac 25447
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>gb|AC141632.4| Mus musculus BAC clone RP24-100G24 from 3, complete sequence
          Length = 180488

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    atttttcaggcttacagaaaa 102
             |||||||||||||||||||||
Sbjct: 21222 atttttcaggcttacagaaaa 21202
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    agaaaactcacttttttaac 116
             ||||||||||||||||||||
Sbjct: 36980 agaaaactcacttttttaac 36999
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>gb|AF186998.5| Homo sapiens chromosome 8 clone CTB-878E2 map q21.3, complete sequence
          Length = 125222

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 340   ctccttccccaggagggcaaggagcatg 367
             ||||||||||| |||||||||| |||||
Sbjct: 25802 ctccttccccaagagggcaaggggcatg 25829
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>gb|AC115911.14| Mus musculus chromosome 6, clone RP24-481I20, complete sequence
          Length = 168641

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agaaaactcacttttttaac 116
             ||||||||||||||||||||
Sbjct: 49680 agaaaactcacttttttaac 49661
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>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    cagggtttattctctgattt 293
              ||||||||||||||||||||
Sbjct: 160599 cagggtttattctctgattt 160618
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>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete
             sequence
          Length = 187926

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aattcagatttttcaggctt 94
             ||||||||||||||||||||
Sbjct: 19739 aattcagatttttcaggctt 19720
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>emb|Z73974.1|CEF29F11 Caenorhabditis elegans Cosmid F29F11, complete sequence
          Length = 36258

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    atacagatgcaattcagatttttc 88
             |||||||||||||| |||||||||
Sbjct: 24808 atacagatgcaattaagatttttc 24785
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>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence
          Length = 176632

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 340    ctccttccccaggagggcaaggagcatg 367
              ||||||||||| |||||||||| |||||
Sbjct: 130824 ctccttccccaagagggcaaggggcatg 130797
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>ref|XM_815175.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508277.80) partial mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 557 gggcaggtgaagcaccggat 576
           ||||||||||||||||||||
Sbjct: 637 gggcaggtgaagcaccggat 656
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>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     aattcagatttttcaggctt 94
              ||||||||||||||||||||
Sbjct: 163987 aattcagatttttcaggctt 163968
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>gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   tttgagatatgaaaaggata 310
             ||||||||||||||||||||
Sbjct: 78955 tttgagatatgaaaaggata 78936
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>emb|AL353806.9| Human DNA sequence from clone RP11-174A8 on chromosome 9 Contains part
             of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor
             protein 2 (paralemmin 2), complete sequence
          Length = 111051

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    actgatgtactcgattcaat 55
             ||||||||||||||||||||
Sbjct: 78491 actgatgtactcgattcaat 78472
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>emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 on chromosome 20q12-13.12
             Contains a novel gene and the SLPI gene for secretory
             leukocyte protease inhibitor (antileukoproteinase),
             complete sequence
          Length = 63796

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tttcaggcttacagaaaact 104
             ||||||||||||||||||||
Sbjct: 53321 tttcaggcttacagaaaact 53302
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>emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 in linkage group 14,
            complete sequence
          Length = 81999

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tgagatatgaaaaggataac 312
            ||||||||||||||||||||
Sbjct: 8517 tgagatatgaaaaggataac 8498
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>gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold
          Length = 355851

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     tttcaggcttacagaaaact 104
              ||||||||||||||||||||
Sbjct: 327099 tttcaggcttacagaaaact 327080
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>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold
          Length = 644818

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     tttcaggcttacagaaaact 104
              ||||||||||||||||||||
Sbjct: 442530 tttcaggcttacagaaaact 442511
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>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1,
             complete sequence
          Length = 151271

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   ttctcaaagtacctatcagg 558
             ||||||||||||||||||||
Sbjct: 90000 ttctcaaagtacctatcagg 89981
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>emb|BX855591.11| Zebrafish DNA sequence from clone DKEY-237H21 in linkage group 1,
             complete sequence
          Length = 131858

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 539   ttctcaaagtacctatcagg 558
             ||||||||||||||||||||
Sbjct: 64924 ttctcaaagtacctatcagg 64905
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>dbj|AK037541.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130024J05 product:hypothetical protein,
            full insert sequence
          Length = 2807

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  ctctctatcttattctcacc 221
            ||||||||||||||||||||
Sbjct: 1958 ctctctatcttattctcacc 1977
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>gb|AY634306.1| Caenorhabditis briggsae strain AF16 gsa-1 gene, complete cds
          Length = 7325

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 75   aattcagatttttcaggcttacagaaaa 102
            |||||| ||||||||||||| |||||||
Sbjct: 4937 aattcaaatttttcaggctttcagaaaa 4910
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>emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 in linkage group 14,
              complete sequence
          Length = 150992

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    tgagatatgaaaaggataac 312
              ||||||||||||||||||||
Sbjct: 142477 tgagatatgaaaaggataac 142496
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>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete
              sequence
          Length = 199317

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ctctctatcttattctcacc 221
              ||||||||||||||||||||
Sbjct: 170111 ctctctatcttattctcacc 170130
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>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence
          Length = 175181

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    cagggtttattctctgattt 293
              ||||||||||||||||||||
Sbjct: 139626 cagggtttattctctgattt 139607
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>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete
             sequence
          Length = 116160

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   accctagtgagggagttctc 501
             ||||||||||||||||||||
Sbjct: 35355 accctagtgagggagttctc 35374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,413,641
Number of Sequences: 3902068
Number of extensions: 5413641
Number of successful extensions: 109214
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108979
Number of HSP's gapped (non-prelim): 233
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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