>gb|AY123420.1| Triticum aestivum putative 40S ribosomal protein S3 mRNA, complete
           cds
          Length = 1004

 Score =  147 bits (74), Expect = 2e-32
 Identities = 121/137 (88%), Gaps = 2/137 (1%)
 Strand = Plus / Minus

                                                                       
Query: 129 aggtnaccaancgttgcatagcccac--ttgtnacaaggataggaaacaagctaggacca 186
           |||| ||||| ||||||||||||| |  || | ||| |||||| |||| ||||| |||||
Sbjct: 873 aggtaaccaagcgttgcatagccctcgcttatcacagggatagaaaactagctacgacca 814

                                                                       
Query: 187 aaatgatgtgccgnttcatggtctgcttgcactactgggagtttagacctcaatcaaagc 246
           |||||||||| || |||||||||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 813 aaatgatgtgacgtttcatggtctgcttgctctactgggactttagacctcaaccaaagc 754

                            
Query: 247 cggggggcgcagctcgt 263
           |||||||||||||||||
Sbjct: 753 cggggggcgcagctcgt 737



 Score = 46.1 bits (23), Expect = 0.055
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 60  aaacttagtttaaacgaaattaa 82
           |||||||||||||||||||||||
Sbjct: 941 aaacttagtttaaacgaaattaa 919

>gb|AF479033.1| Triticum aestivum 40S ribosomal protein mRNA, partial cds
          Length = 240

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 229 ttagacctcaatcaaagccggggggcgcagctcgt 263
           ||||||||||| ||||||||| |||||||||||||
Sbjct: 240 ttagacctcaaccaaagccggtgggcgcagctcgt 206

>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
             complete sequence
          Length = 131922

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   aggaaacaagctaggaccaa 187
             ||||||||||||||||||||
Sbjct: 85738 aggaaacaagctaggaccaa 85719

>emb|BX842627.1| Neurospora crassa DNA linkage group I BAC clone B8J22
          Length = 75335

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  ataggaaacaagctaggacc 185
            ||||||||||||||||||||
Sbjct: 7696 ataggaaacaagctaggacc 7677

>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1341F06, from chromosome 10, complete
             sequence
          Length = 102520

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aggaaacaagctaggaccaa 187
             ||||||||||||||||||||
Sbjct: 88705 aggaaacaagctaggaccaa 88724

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      aggaaacaagctaggaccaa 187
                ||||||||||||||||||||
Sbjct: 11277750 aggaaacaagctaggaccaa 11277731

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       aatccaaacaatggttcttt 29
                ||||||||||||||||||||
Sbjct: 14686047 aatccaaacaatggttcttt 14686066

>dbj|AP003257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460H02
          Length = 155012

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aatccaaacaatggttcttt 29
             ||||||||||||||||||||
Sbjct: 55147 aatccaaacaatggttcttt 55166

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      aggaaacaagctaggaccaa 187
                ||||||||||||||||||||
Sbjct: 11284190 aggaaacaagctaggaccaa 11284171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,399,551
Number of Sequences: 3902068
Number of extensions: 1399551
Number of successful extensions: 21221
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21181
Number of HSP's gapped (non-prelim): 39
length of query: 263
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 241
effective length of database: 17,147,199,772
effective search space: 4132475145052
effective search space used: 4132475145052
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)