ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19h23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550073.1| Oryza sativa (japonica cultivar-group), mRNA 357 3e-95
2dbj|AK073130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
4dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence 80 1e-11
6gb|AF165891.1|AF165891 Vigna unguiculata phosphatidic acid phosp... 74 7e-10
7emb|CR931729.2| Medicago truncatula chromosome 5 clone mte1-82a1... 52 0.002
8ref|NM_111128.1| Arabidopsis thaliana LPP3; phosphatidate phosph... 50 0.010
9gb|AY084915.1| Arabidopsis thaliana clone 121374 mRNA, complete ... 50 0.010
10gb|DQ317319.1| Musa acuminata putative phosphaticid acid phospha... 48 0.038
11gb|AY601242.1| Allagoptera leucocalyx clone A1 phosphoribulokina... 44 0.60
12ref|NM_192159.1| Oryza sativa (japonica cultivar-group), predic... 44 0.60
13dbj|AK101201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
14dbj|AP006431.1| Lotus japonicus genomic DNA, chromosome 5, clone... 44 0.60
15gb|AC113300.7| Mus musculus chromosome 5, clone RP23-430C4, comp... 42 2.4
16emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20... 42 2.4
17emb|AL590624.8| Human DNA sequence from clone RP11-380B22 on chr... 42 2.4
18gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13... 42 2.4
19dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
20dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
21gb|AF003528.1|AF003528 Homo sapiens X-linked anhidroitic ectoder... 42 2.4
22ref|XM_519780.1| PREDICTED: Pan troglodytes chromodomain helicas... 40 9.4
23gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 9.4
24gb|AY307175.1| Ichthyomyzon unicuspis preprogonadotropin-releasi... 40 9.4
25gb|AC145405.3| Gorilla gorilla gorilla clone CH255-421A19, compl... 40 9.4
26ref|XM_584090.2| PREDICTED: Bos taurus similar to centrosomal pr... 40 9.4
27ref|NM_017780.2| Homo sapiens chromodomain helicase DNA binding ... 40 9.4
28gb|AC087730.2| Pan troglodytes clone RP43-89H17, complete sequence 40 9.4
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.4
30gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complet... 40 9.4
31ref|XM_544097.2| PREDICTED: Canis familiaris KIAA1416, transcrip... 40 9.4
32gb|AY524778.1| Homo sapiens phospholipase A2, group V (PLA2G5) g... 40 9.4
33ref|XM_973617.1| PREDICTED: Mus musculus chromodomain helicase D... 40 9.4
34ref|XM_973577.1| PREDICTED: Mus musculus chromodomain helicase D... 40 9.4
35ref|XM_905428.2| PREDICTED: Mus musculus chromodomain helicase D... 40 9.4
36ref|XM_985866.1| PREDICTED: Mus musculus chromodomain helicase D... 40 9.4
37emb|CT009484.8| M.truncatula DNA sequence from clone MTH2-69D3 o... 40 9.4
38gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome... 40 9.4
39ref|XM_726335.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.4
40gb|AC135415.27| Medicago truncatula clone mth2-10b9, complete se... 40 9.4
41emb|AL158172.5| Human DNA sequence from clone RP1-169O23 on chro... 40 9.4
42emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chr... 40 9.4
43dbj|AK123158.1| Homo sapiens cDNA FLJ41163 fis, clone BRACE2039734 40 9.4
44gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, comp... 40 9.4
45gb|AF386920.1| Bovine rotavirus strain B8 outer capsid protein V... 40 9.4
46gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8... 40 9.4
47gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, r... 40 9.4
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
49gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 9.4
50gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 9.4
51ref|XM_232671.3| PREDICTED: Rattus norvegicus chromodomain helic... 40 9.4
52emb|BX648966.1|HSM809117 Homo sapiens mRNA; cDNA DKFZp686C2294 (... 40 9.4
53gb|AY108542.1| Zea mays PCO117551 mRNA sequence 40 9.4
54gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13... 40 9.4
55gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, r... 40 9.4
56dbj|D14033.1|ROHVP7P Human rotavirus gene for VP7 protein, compl... 40 9.4
57gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosom... 40 9.4
58emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on ch... 40 9.4
59emb|AL844891.7| Mouse DNA sequence from clone RP23-350N21 on chr... 40 9.4
60emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr... 40 9.4 
>ref|XM_550073.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1578

 Score =  357 bits (180), Expect = 3e-95
 Identities = 351/408 (86%)
 Strand = Plus / Minus

                                                                        
Query: 278  aagctcctccagcatgtggaagtatgcatagggcccccagccttgatggtgatatggagg 337
            ||||||||| ||||| |||||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 1155 aagctcctcaagcatatggaagtatgcatacggtccccaaccttgatgatggtatggagg 1096

                                                                        
Query: 338  aggaaagaagtgcaaatagcacagcactgccacgatatatccaatcaggccaccgacaaa 397
             |||||||||||||| || || ||||  |||| |||| |||| |  ||||| ||  ||||
Sbjct: 1095 tggaaagaagtgcaagtaacagagcatcgccatgataaatcctagtaggccgccagcaaa 1036

                                                                        
Query: 398  cacgtcctcccagtggtgtcgatagttgtctattctagaaatcccaacaagtgaagcgag 457
            ||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||| | 
Sbjct: 1035 cacatcctcccagtggtgtcgatagtcatctattctagaaatcccgacgagtgaagcaat 976

                                                                        
Query: 458  aagtagaggaagaatcacgatgcaaagctttgccacgtgacctttgcgatcaaatgcctg 517
            ||| || ||||||||||  |||||||| || || || ||||||| |||||||||  ||| 
Sbjct: 975  aagaaggggaagaatcataatgcaaagtttggcaacatgaccttggcgatcaaacacctt 916

                                                                        
Query: 518  aattttgccagataagtatagtgacaaaaacccaaatccagcaaaagaccacgacgtgtg 577
            |||||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 915  aattttgccagataggtagagtgacagaaatccaagtccagcaaaagaccacgacgtgtg 856

                                                                        
Query: 578  tccactaggaaaactcttgcgcccatcggttaagaaacctttcttgccatggcaaatcac 637
            ||||||||||||||||||||| |||||  ||||||| | |||||  ||||| ||||||||
Sbjct: 855  tccactaggaaaactcttgcgtccatcctttaagaagcttttctctccatgacaaatcac 796

                                                            
Query: 638  accaccagtcacttgatcatatacctgccttccatcaggaaaacaccg 685
            | |||| |||||||||||||||| |||| |||||||||||||||||||
Sbjct: 795  atcacctgtcacttgatcatataactgctttccatcaggaaaacaccg 748
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>dbj|AK073130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011L13, full
            insert sequence
          Length = 1578

 Score =  357 bits (180), Expect = 3e-95
 Identities = 351/408 (86%)
 Strand = Plus / Minus

                                                                        
Query: 278  aagctcctccagcatgtggaagtatgcatagggcccccagccttgatggtgatatggagg 337
            ||||||||| ||||| |||||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 1155 aagctcctcaagcatatggaagtatgcatacggtccccaaccttgatgatggtatggagg 1096

                                                                        
Query: 338  aggaaagaagtgcaaatagcacagcactgccacgatatatccaatcaggccaccgacaaa 397
             |||||||||||||| || || ||||  |||| |||| |||| |  ||||| ||  ||||
Sbjct: 1095 tggaaagaagtgcaagtaacagagcatcgccatgataaatcctagtaggccgccagcaaa 1036

                                                                        
Query: 398  cacgtcctcccagtggtgtcgatagttgtctattctagaaatcccaacaagtgaagcgag 457
            ||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||| | 
Sbjct: 1035 cacatcctcccagtggtgtcgatagtcatctattctagaaatcccgacgagtgaagcaat 976

                                                                        
Query: 458  aagtagaggaagaatcacgatgcaaagctttgccacgtgacctttgcgatcaaatgcctg 517
            ||| || ||||||||||  |||||||| || || || ||||||| |||||||||  ||| 
Sbjct: 975  aagaaggggaagaatcataatgcaaagtttggcaacatgaccttggcgatcaaacacctt 916

                                                                        
Query: 518  aattttgccagataagtatagtgacaaaaacccaaatccagcaaaagaccacgacgtgtg 577
            |||||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 915  aattttgccagataggtagagtgacagaaatccaagtccagcaaaagaccacgacgtgtg 856

                                                                        
Query: 578  tccactaggaaaactcttgcgcccatcggttaagaaacctttcttgccatggcaaatcac 637
            ||||||||||||||||||||| |||||  ||||||| | |||||  ||||| ||||||||
Sbjct: 855  tccactaggaaaactcttgcgtccatcctttaagaagcttttctctccatgacaaatcac 796

                                                            
Query: 638  accaccagtcacttgatcatatacctgccttccatcaggaaaacaccg 685
            | |||| |||||||||||||||| |||| |||||||||||||||||||
Sbjct: 795  atcacctgtcacttgatcatataactgctttccatcaggaaaacaccg 748
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 150/174 (86%)
 Strand = Plus / Minus

                                                                           
Query: 394     caaacacgtcctcccagtggtgtcgatagttgtctattctagaaatcccaacaagtgaag 453
               ||||||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||
Sbjct: 2098959 caaacacatcctcccagtggtgtcgatagtcatctattctagaaatcccgacgagtgaag 2098900

                                                                           
Query: 454     cgagaagtagaggaagaatcacgatgcaaagctttgccacgtgacctttgcgatcaaatg 513
               | | ||| || ||||||||||  |||||||| || || || ||||||| |||||||||  
Sbjct: 2098899 caataagaaggggaagaatcataatgcaaagtttggcaacatgaccttggcgatcaaaca 2098840

                                                                     
Query: 514     cctgaattttgccagataagtatagtgacaaaaacccaaatccagcaaaagacc 567
               ||| |||||||||||||| ||| ||||||| ||| |||| ||||||||||||||
Sbjct: 2098839 ccttaattttgccagataggtagagtgacagaaatccaagtccagcaaaagacc 2098786



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                           
Query: 567     cacgacgtgtgtccactaggaaaactcttgcgcccatcggttaagaaacctttcttgcca 626
               |||||||||||||||||||||||||||||||| |||||  ||||||| | |||||  |||
Sbjct: 2098393 cacgacgtgtgtccactaggaaaactcttgcgtccatcctttaagaagcttttctctcca 2098334

                                                 
Query: 627     tggcaaatcacaccaccagtcacttgatcatata 660
               || ||||||||| |||| ||||||||||||||||
Sbjct: 2098333 tgacaaatcacatcacctgtcacttgatcatata 2098300



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                           
Query: 278     aagctcctccagcatgtggaagtatgcatagggcccccagcctt 321
               ||||||||| ||||| |||||||||||||| || ||||| ||||
Sbjct: 2099271 aagctcctcaagcatatggaagtatgcatacggtccccaacctt 2099228



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 318     ccttgatggtgatatggaggaggaaagaagtgcaa 352
               |||||||| || |||||||| ||||||||||||||
Sbjct: 2099121 ccttgatgatggtatggaggtggaaagaagtgcaa 2099087



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 659     tacctgccttccatcaggaaaacaccg 685
               ||||||| |||||||||||||||||||
Sbjct: 2098192 tacctgctttccatcaggaaaacaccg 2098166



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 543      aaaaacccaaatccagcaaaa 563
                |||||||||||||||||||||
Sbjct: 30595833 aaaaacccaaatccagcaaaa 30595853
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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score =  155 bits (78), Expect = 2e-34
 Identities = 150/174 (86%)
 Strand = Plus / Minus

                                                                         
Query: 394   caaacacgtcctcccagtggtgtcgatagttgtctattctagaaatcccaacaagtgaag 453
             ||||||| ||||||||||||||||||||||  ||||||||||||||||| || |||||||
Sbjct: 20071 caaacacatcctcccagtggtgtcgatagtcatctattctagaaatcccgacgagtgaag 20012

                                                                         
Query: 454   cgagaagtagaggaagaatcacgatgcaaagctttgccacgtgacctttgcgatcaaatg 513
             | | ||| || ||||||||||  |||||||| || || || ||||||| |||||||||  
Sbjct: 20011 caataagaaggggaagaatcataatgcaaagtttggcaacatgaccttggcgatcaaaca 19952

                                                                   
Query: 514   cctgaattttgccagataagtatagtgacaaaaacccaaatccagcaaaagacc 567
             ||| |||||||||||||| ||| ||||||| ||| |||| ||||||||||||||
Sbjct: 19951 ccttaattttgccagataggtagagtgacagaaatccaagtccagcaaaagacc 19898



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 567   cacgacgtgtgtccactaggaaaactcttgcgcccatcggttaagaaacctttcttgcca 626
             |||||||||||||||||||||||||||||||| |||||  ||||||| | |||||  |||
Sbjct: 19505 cacgacgtgtgtccactaggaaaactcttgcgtccatcctttaagaagcttttctctcca 19446

                                               
Query: 627   tggcaaatcacaccaccagtcacttgatcatata 660
             || ||||||||| |||| ||||||||||||||||
Sbjct: 19445 tgacaaatcacatcacctgtcacttgatcatata 19412



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 278   aagctcctccagcatgtggaagtatgcatagggcccccagcctt 321
             ||||||||| ||||| |||||||||||||| || ||||| ||||
Sbjct: 20383 aagctcctcaagcatatggaagtatgcatacggtccccaacctt 20340



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 318   ccttgatggtgatatggaggaggaaagaagtgcaa 352
             |||||||| || |||||||| ||||||||||||||
Sbjct: 20233 ccttgatgatggtatggaggtggaaagaagtgcaa 20199



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 659   tacctgccttccatcaggaaaacaccg 685
             ||||||| |||||||||||||||||||
Sbjct: 19304 tacctgctttccatcaggaaaacaccg 19278
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>gb|AY325816.1| Zea mays BAC clone Z013I05, complete sequence
          Length = 152337

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 574   tgtgtccactaggaaaactcttgcgcccatcggttaagaaacctttcttgccatggcaaa 633
             |||| ||||||||||| ||||||||||||||   ||||||   |||||  ||||||||||
Sbjct: 57903 tgtggccactaggaaagctcttgcgcccatcttgtaagaagtttttctcaccatggcaaa 57844

                                             
Query: 634   tcacaccaccagtcacttgatcatatacctgc 665
             ||||| |||||||||||||||| |||| ||||
Sbjct: 57843 tcacatcaccagtcacttgatcgtataactgc 57812
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>gb|AF165891.1|AF165891 Vigna unguiculata phosphatidic acid phosphatase alpha mRNA, complete
            cds
          Length = 1485

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 169/213 (79%)
 Strand = Plus / Minus

                                                                        
Query: 384  aggccaccgacaaacacgtcctcccagtggtgtcgatagttgtctattctagaaatccca 443
            ||||| ||| ||||||| |||| ||||||||| |  ||||  || | || |||||| |||
Sbjct: 1003 aggcctccggcaaacacatcctgccagtggtgccagtagtcatcgactcgagaaatgcca 944

                                                                        
Query: 444  acaagtgaagcgagaagtagaggaagaatcacgatgcaaagctttgccacgtgacctttg 503
            |||||||| || | |||||| || ||||  || ||||| || ||||| || |||||| ||
Sbjct: 943  acaagtgatgcaaaaagtagtggcagaaaaacaatgcagagttttgcaacatgacctctg 884

                                                                        
Query: 504  cgatcaaatgcctgaattttgccagataagtatagtgacaaaaacccaaatccagcaaaa 563
            ||||||||||| |  ||||| ||||||||||| ||||| ||||| || |  |||| ||| 
Sbjct: 883  cgatcaaatgcttttattttcccagataagtacagtgataaaaatcccagaccagaaaat 824

                                             
Query: 564  gaccacgacgtgtgtccactaggaaaactcttg 596
            ||||| || || || || || ||||||||||||
Sbjct: 823  gaccatgaagtatggccgcttggaaaactcttg 791
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>emb|CR931729.2| Medicago truncatula chromosome 5 clone mte1-82a1, COMPLETE SEQUENCE
          Length = 94751

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 477   atgcaaagctttgccacgtgacctttgcgatcaaatgc 514
             |||||||| ||||| || ||||||||||||||||||||
Sbjct: 42964 atgcaaagttttgcaacatgacctttgcgatcaaatgc 42927



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 327   tgatatggaggaggaaagaagtgcaaatagca 358
             ||||| ||||||||||| || |||||||||||
Sbjct: 43234 tgataaggaggaggaaaaaactgcaaatagca 43203
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>ref|NM_111128.1| Arabidopsis thaliana LPP3; phosphatidate phosphatase AT3G02600
           (LPP3) mRNA, complete cds
          Length = 1538

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                       
Query: 477 atgcaaagctttgccacgtgacctttgcgatcaaatgcctgaattttgccagataagtat 536
           ||||| |||||||| ||||| ||||| |  |||||||| ||||| || || |||||||| 
Sbjct: 929 atgcatagctttgcaacgtggcctttaccgtcaaatgcttgaatctttcccgataagtaa 870

                                                                
Query: 537 agtgacaaaaacccaaatccagcaaaagaccacgacgtgtgtccactaggaaa 589
           || || | ||| || |  || | ||||||||| |||||||||||||| |||||
Sbjct: 869 agcgaaagaaatccgagacccgaaaaagaccatgacgtgtgtccacttggaaa 817
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>gb|AY084915.1| Arabidopsis thaliana clone 121374 mRNA, complete sequence
          Length = 1538

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                       
Query: 477 atgcaaagctttgccacgtgacctttgcgatcaaatgcctgaattttgccagataagtat 536
           ||||| |||||||| ||||| ||||| |  |||||||| ||||| || || |||||||| 
Sbjct: 929 atgcatagctttgcaacgtggcctttaccgtcaaatgcttgaatctttcccgataagtaa 870

                                                                
Query: 537 agtgacaaaaacccaaatccagcaaaagaccacgacgtgtgtccactaggaaa 589
           || || | ||| || |  || | ||||||||| |||||||||||||| |||||
Sbjct: 869 agcgaaagaaatccgagacccgaaaaagaccatgacgtgtgtccacttggaaa 817
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>gb|DQ317319.1| Musa acuminata putative phosphaticid acid phosphatase mRNA, partial
           cds
          Length = 541

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 558 gcaaaagaccacgacgtgtgtccactaggaaaactcttgcgccc 601
           ||||||||||| ||||  |||||||| |||||||||||| ||||
Sbjct: 327 gcaaaagaccatgacgaatgtccacttggaaaactcttgtgccc 284
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>gb|AY601242.1| Allagoptera leucocalyx clone A1 phosphoribulokinase-like protein 2
           (PRK) gene, exons 4, 5 and partial cds
          Length = 697

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 244 gttggttttgtgcattatttga 265
           ||||||||||||||||||||||
Sbjct: 289 gttggttttgtgcattatttga 268
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>ref|NM_192159.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 987

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 555 ccagcaaaagaccacgacgtgtgtccactaggaaaactcttg 596
           |||||||||||||| || || || ||||| ||||||||||||
Sbjct: 485 ccagcaaaagaccaagaagtatggccactcggaaaactcttg 444
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>dbj|AK101201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030N09, full
           insert sequence
          Length = 2058

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 555 ccagcaaaagaccacgacgtgtgtccactaggaaaactcttg 596
           |||||||||||||| || || || ||||| ||||||||||||
Sbjct: 840 ccagcaaaagaccaagaagtatggccactcggaaaactcttg 799
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>dbj|AP006431.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT38F20, TM0328,
             complete sequence
          Length = 119346

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 458   aagtagaggaagaatcacgatgcaaagctttgccacgtgacctttgcgatcaaa 511
             ||||||||||| || ||| ||||| |  ||||||||||| ||| ||||||||||
Sbjct: 20934 aagtagaggaataaacacaatgcataattttgccacgtgccctctgcgatcaaa 20987
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>gb|AC113300.7| Mus musculus chromosome 5, clone RP23-430C4, complete sequence
          Length = 176085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   ttccaaatcatttcttgatct 193
             |||||||||||||||||||||
Sbjct: 29002 ttccaaatcatttcttgatct 28982
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>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and
              01G10 from library NotreDame1 of Anopheles gambiae (African
              malaria mosquito) strain PEST
          Length = 447895

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 133    aaggtacgctacacggagggg 153
              |||||||||||||||||||||
Sbjct: 142259 aaggtacgctacacggagggg 142239
to top
>emb|AL590624.8| Human DNA sequence from clone RP11-380B22 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 157779

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 540   gacaaaaacccaaatccagca 560
             |||||||||||||||||||||
Sbjct: 78823 gacaaaaacccaaatccagca 78803
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>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence
          Length = 188657

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 545    aaacccaaatccagcaaaaga 565
              |||||||||||||||||||||
Sbjct: 119160 aaacccaaatccagcaaaaga 119140
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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   aaaaacccaaatccagcaaaa 563
             |||||||||||||||||||||
Sbjct: 78437 aaaaacccaaatccagcaaaa 78457
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   aaaaacccaaatccagcaaaa 563
             |||||||||||||||||||||
Sbjct: 38110 aaaaacccaaatccagcaaaa 38130
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>gb|AF003528.1|AF003528 Homo sapiens X-linked anhidroitic ectodermal dysplasia protein gene
             (EDA), exon 2 and flanking repeat regions
          Length = 93963

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 545   aaacccaaatccagcaaaaga 565
             |||||||||||||||||||||
Sbjct: 56128 aaacccaaatccagcaaaaga 56108
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>ref|XM_519780.1| PREDICTED: Pan troglodytes chromodomain helicase DNA binding protein
            7 (LOC464198), mRNA
          Length = 7390

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 1050 aaaacccaaatccagcaaaa 1069
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 545     aaacccaaatccagcaaaag 564
               ||||||||||||||||||||
Sbjct: 1206783 aaacccaaatccagcaaaag 1206764
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>gb|AY307175.1| Ichthyomyzon unicuspis preprogonadotropin-releasing hormone III
           mRNA, complete cds
          Length = 723

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 cgcctcaagctcctccagca 291
           ||||||||||||||||||||
Sbjct: 266 cgcctcaagctcctccagca 247
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>gb|AC145405.3| Gorilla gorilla gorilla clone CH255-421A19, complete sequence
          Length = 179099

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 545  aaacccaaatccagcaaaag 564
            ||||||||||||||||||||
Sbjct: 3012 aaacccaaatccagcaaaag 2993
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>ref|XM_584090.2| PREDICTED: Bos taurus similar to centrosomal protein 2 (LOC507479),
            mRNA
          Length = 7634

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 272  cgcctcaagctcctccagca 291
            ||||||||||||||||||||
Sbjct: 3396 cgcctcaagctcctccagca 3377
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>ref|NM_017780.2| Homo sapiens chromodomain helicase DNA binding protein 7 (CHD7), mRNA
          Length = 10469

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2547 aaaacccaaatccagcaaaa 2566
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>gb|AC087730.2| Pan troglodytes clone RP43-89H17, complete sequence
          Length = 148293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   aaacccaaatccagcaaaag 564
             ||||||||||||||||||||
Sbjct: 28427 aaacccaaatccagcaaaag 28408
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      ttccagattccaaatcattt 185
                ||||||||||||||||||||
Sbjct: 34938490 ttccagattccaaatcattt 34938471
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>gb|AC002465.1| Homo sapiens BAC clone CTA-343P13 from 7, complete sequence
          Length = 155881

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   aaacccaaatccagcaaaag 564
             ||||||||||||||||||||
Sbjct: 65978 aaacccaaatccagcaaaag 65959
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>ref|XM_544097.2| PREDICTED: Canis familiaris KIAA1416, transcript variant 1
            (LOC486968), mRNA
          Length = 10221

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2236 aaaacccaaatccagcaaaa 2255
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>gb|AY524778.1| Homo sapiens phospholipase A2, group V (PLA2G5) gene, complete cds
          Length = 24340

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   catgtggaagtatgcatagg 309
             ||||||||||||||||||||
Sbjct: 18311 catgtggaagtatgcatagg 18330
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>ref|XM_973617.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 7,
            transcript variant 2 (Chd7), mRNA
          Length = 9237

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2316 aaaacccaaatccagcaaaa 2335
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>ref|XM_973577.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 7,
            transcript variant 1 (Chd7), mRNA
          Length = 9289

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2368 aaaacccaaatccagcaaaa 2387
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>ref|XM_905428.2| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 7,
            transcript variant 2 (Chd7), mRNA
          Length = 9298

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2221 aaaacccaaatccagcaaaa 2240
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>ref|XM_985866.1| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 7,
            transcript variant 1 (Chd7), mRNA
          Length = 9444

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 2368 aaaacccaaatccagcaaaa 2387
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>emb|CT009484.8| M.truncatula DNA sequence from clone MTH2-69D3 on chromosome 3,
             complete sequence
          Length = 109089

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   gagaagtagaggaagaatca 474
             ||||||||||||||||||||
Sbjct: 88280 gagaagtagaggaagaatca 88299



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   gagaagtagaggaagaatca 474
             ||||||||||||||||||||
Sbjct: 77377 gagaagtagaggaagaatca 77396



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   gagaagtagaggaagaatca 474
             ||||||||||||||||||||
Sbjct: 66467 gagaagtagaggaagaatca 66486
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>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence
          Length = 154695

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   aaaacccaaatccagcaaaa 563
             ||||||||||||||||||||
Sbjct: 22773 aaaacccaaatccagcaaaa 22792
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>ref|XM_726335.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03424)
           partial mRNA
          Length = 5571

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 attccaaatcatttcttgat 191
           ||||||||||||||||||||
Sbjct: 190 attccaaatcatttcttgat 171
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>gb|AC135415.27| Medicago truncatula clone mth2-10b9, complete sequence
          Length = 130045

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   gagaagtagaggaagaatca 474
             ||||||||||||||||||||
Sbjct: 91846 gagaagtagaggaagaatca 91827



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   gagaagtagaggaagaatca 474
             ||||||||||||||||||||
Sbjct: 80945 gagaagtagaggaagaatca 80926
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>emb|AL158172.5| Human DNA sequence from clone RP1-169O23 on chromosome 1 Contains the
             3' end of the PLA2G5 gene for phospholipase A2 group V,
             the PLA2G2D gene for phospholipase A2 group IID and the 5'
             end of the PLA2G2F gene for phospholipase A2 group IIF,
             complete sequence
          Length = 98743

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   catgtggaagtatgcatagg 309
             ||||||||||||||||||||
Sbjct: 40259 catgtggaagtatgcatagg 40278
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>emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chromosome 20 Contains the
             3' end of the gene for a novel protein (LOC284776),
             complete sequence
          Length = 169342

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   caggctgttggttttgtgca 257
             ||||||||||||||||||||
Sbjct: 55158 caggctgttggttttgtgca 55177
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>dbj|AK123158.1| Homo sapiens cDNA FLJ41163 fis, clone BRACE2039734
          Length = 1730

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 1353 aaaacccaaatccagcaaaa 1372
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>gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, complete sequence
          Length = 157672

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   aaaacccaaatccagcaaaa 563
             ||||||||||||||||||||
Sbjct: 26937 aaaacccaaatccagcaaaa 26956
to top
>gb|AF386920.1| Bovine rotavirus strain B8 outer capsid protein VP7 gene, complete
           cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  acatatctagttctaaactc 80
           ||||||||||||||||||||
Sbjct: 505 acatatctagttctaaactc 486
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>gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8, complete sequence
          Length = 192579

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    ggtgatatggaggaggaaag 344
              ||||||||||||||||||||
Sbjct: 124084 ggtgatatggaggaggaaag 124065
to top
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone
              BACR14B02, complete sequence
          Length = 194036

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    cacgatgcaaagctttgcca 492
              ||||||||||||||||||||
Sbjct: 172058 cacgatgcaaagctttgcca 172039
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      ttccagattccaaatcattt 185
                ||||||||||||||||||||
Sbjct: 35028562 ttccagattccaaatcattt 35028543
to top
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 545     aaacccaaatccagcaaaag 564
               ||||||||||||||||||||
Sbjct: 1119626 aaacccaaatccagcaaaag 1119607
to top
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ttccagattccaaatcattt 185
             ||||||||||||||||||||
Sbjct: 76990 ttccagattccaaatcattt 77009
to top
>ref|XM_232671.3| PREDICTED: Rattus norvegicus chromodomain helicase DNA binding
            protein 7 (predicted) (Chd7_predicted), mRNA
          Length = 11456

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 544  aaaacccaaatccagcaaaa 563
            ||||||||||||||||||||
Sbjct: 3423 aaaacccaaatccagcaaaa 3442
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>emb|BX648966.1|HSM809117 Homo sapiens mRNA; cDNA DKFZp686C2294 (from clone DKFZp686C2294)
          Length = 6607

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  catgtggaagtatgcatagg 309
            ||||||||||||||||||||
Sbjct: 3542 catgtggaagtatgcatagg 3561
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>gb|AY108542.1| Zea mays PCO117551 mRNA sequence
          Length = 475

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 444 acaagtgaagcgagaagtagaggaagaatcacgatgcaaagctttgccacgtgacctttg 503
           |||||||| |||| ||||||||| ||||  || | ||| || ||||| | |||||| |||
Sbjct: 336 acaagtgacgcgacaagtagaggcagaaaaactaagcacagttttgcaatgtgacccttg 277

                   
Query: 504 cgatcaaa 511
           ||||||||
Sbjct: 276 cgatcaaa 269
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>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete
              sequence
          Length = 265215

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    cacgatgcaaagctttgcca 492
              ||||||||||||||||||||
Sbjct: 137615 cacgatgcaaagctttgcca 137596
to top
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones
             DS08614 and DS00667, complete sequence
          Length = 100575

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   cacgatgcaaagctttgcca 492
             ||||||||||||||||||||
Sbjct: 82275 cacgatgcaaagctttgcca 82256
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>dbj|D14033.1|ROHVP7P Human rotavirus gene for VP7 protein, complete cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  acatatctagttctaaactc 80
           ||||||||||||||||||||
Sbjct: 505 acatatctagttctaaactc 486
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>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete
             sequence
          Length = 196838

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   caaaaacccaaatccagcaa 561
             ||||||||||||||||||||
Sbjct: 98665 caaaaacccaaatccagcaa 98684
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>emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on chromosome 4, complete
             sequence
          Length = 136895

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   aaaacccaaatccagcaaaa 563
             ||||||||||||||||||||
Sbjct: 24045 aaaacccaaatccagcaaaa 24064
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>emb|AL844891.7| Mouse DNA sequence from clone RP23-350N21 on chromosome 2, complete
             sequence
          Length = 138602

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 539   tgacaaaaacccaaatccagcaaa 562
             |||||||| |||||||||||||||
Sbjct: 70452 tgacaaaatcccaaatccagcaaa 70429
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>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
             sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tgatatggaggaggaaagaa 346
             ||||||||||||||||||||
Sbjct: 34182 tgatatggaggaggaaagaa 34163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,738,589
Number of Sequences: 3902068
Number of extensions: 5738589
Number of successful extensions: 103243
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102981
Number of HSP's gapped (non-prelim): 261
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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