ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19h14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 617527 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 617468 Query: 415 aagatgagtatcaccctcagcgggcacat 443 ||||| || |||||||||||||||||||| Sbjct: 617467 aagattaggatcaccctcagcgggcacat 617439 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 147 tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 206 |||| |||||||||| |||||| |||||| ||||||| |||||| || | ||||||||| Sbjct: 619125 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 619066 Query: 207 ccgcccgcttgccatgtccaccatcgtccagaatcctgt 245 ||| |||||||||||||||||||||||||||||||| Sbjct: 619065 tttcccacttgccatgtccaccatcgtccagaatcctgt 619027 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 380 ggaggaggaagaagccggcgatggtggcgg 409 |||||| ||||||| ||||||||||||||| Sbjct: 28096877 ggaggaagaagaagacggcgatggtggcgg 28096906
>dbj|AK073235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F07, full insert sequence Length = 922 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 485 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 426 Query: 415 aagatgagtatcaccctcagcgggcacat 443 ||||| || |||||||||||||||||||| Sbjct: 425 aagattaggatcaccctcagcgggcacat 397 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 147 tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 206 |||| |||||||||| |||||| |||||| ||||||| |||||| || | ||||||||| Sbjct: 666 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 607 Query: 207 ccgcccgcttgccatgtccaccatcgtccagaatcctgt 245 ||| |||||||||||||||||||||||||||||||| Sbjct: 606 tttcccacttgccatgtccaccatcgtccagaatcctgt 568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 617527 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 617468 Query: 415 aagatgagtatcaccctcagcgggcacat 443 ||||| || |||||||||||||||||||| Sbjct: 617467 aagattaggatcaccctcagcgggcacat 617439 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 147 tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 206 |||| |||||||||| |||||| |||||| ||||||| |||||| || | ||||||||| Sbjct: 619125 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 619066 Query: 207 ccgcccgcttgccatgtccaccatcgtccagaatcctgt 245 ||| |||||||||||||||||||||||||||||||| Sbjct: 619065 tttcccacttgccatgtccaccatcgtccagaatcctgt 619027 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 380 ggaggaggaagaagccggcgatggtggcgg 409 |||||| ||||||| ||||||||||||||| Sbjct: 28081755 ggaggaagaagaagacggcgatggtggcgg 28081784
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 125445 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatggtggcggagagg 125504 Query: 415 aagatgagtatcaccctcagcgggcacat 443 ||||| || |||||||||||||||||||| Sbjct: 125505 aagattaggatcaccctcagcgggcacat 125533 Score = 93.7 bits (47), Expect = 6e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 147 tcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggta 206 |||| |||||||||| |||||| |||||| ||||||| |||||| || | ||||||||| Sbjct: 123847 tcactgggccttctcagattcacattttgttggtggtgaaacaagagtgcgccaaaggta 123906 Query: 207 ccgcccgcttgccatgtccaccatcgtccagaatcctgt 245 ||| |||||||||||||||||||||||||||||||| Sbjct: 123907 tttcccacttgccatgtccaccatcgtccagaatcctgt 123945
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| |||||||| || ||||||||| Sbjct: 655586 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 655527 Query: 415 aagatgagtatcaccctcagcgggcacat 443 |||||||| |||||||||||||||||||| Sbjct: 655526 aagatgaggatcaccctcagcgggcacat 655498 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 155 ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 214 ||||||| ||||| |||||| |||||||| |||||| || | ||||||||| ||| | Sbjct: 657147 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 657088 Query: 215 ttgccatgtccaccatcgtccagaatcctgt 245 ||||||||||||||||||||||||||||||| Sbjct: 657087 ttgccatgtccaccatcgtccagaatcctgt 657057
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| |||||||| || ||||||||| Sbjct: 655586 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 655527 Query: 415 aagatgagtatcaccctcagcgggcacat 443 |||||||| |||||||||||||||||||| Sbjct: 655526 aagatgaggatcaccctcagcgggcacat 655498 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 155 ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 214 ||||||| ||||| |||||| |||||||| |||||| || | ||||||||| ||| | Sbjct: 657147 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 657088 Query: 215 ttgccatgtccaccatcgtccagaatcctgt 245 ||||||||||||||||||||||||||||||| Sbjct: 657087 ttgccatgtccaccatcgtccagaatcctgt 657057
>emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial sequence from PAC 1 of BAC OSJNBb0027O09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 14570 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 355 aggtccggctcggcgttgaggccccggaggaggaagaagccggcgatggtggcggagagg 414 ||||| || ||||||||||||||||||| ||||||||| |||||||| || ||||||||| Sbjct: 8732 aggtcgggatcggcgttgaggccccggatgaggaagaatccggcgatagtagcggagagg 8673 Query: 415 aagatgagtatcaccctcagcgggcacat 443 |||||||| |||||||||||||||||||| Sbjct: 8672 aagatgaggatcaccctcagcgggcacat 8644 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 155 ccttctcggattcagattttgccggtggtgcaacaagggtcctccaaaggtaccgcccgc 214 ||||||| ||||| |||||| |||||||| |||||| || | ||||||||| ||| | Sbjct: 10293 ccttctcagattcgcattttgtcggtggtgaaacaagagtgcgccaaaggtatttcccac 10234 Query: 215 ttgccatgtccaccatcgtccagaatcctgt 245 ||||||||||||||||||||||||||||||| Sbjct: 10233 ttgccatgtccaccatcgtccagaatcctgt 10203
>gb|AY106014.1| Zea mays PCO120164 mRNA sequence Length = 391 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 143 ttcgtcaccgggccttctcggattcagattttgccggtggtgcaacaagggtcctccaaa 202 ||||||||||||||||||||||||| || || || || | ||||||||||| | ||| | Sbjct: 240 ttcgtcaccgggccttctcggattccgaattcgcgggctgcgcaacaagggtgcgccaga 299 Query: 203 ggtaccgcccgcttgccatgtccaccatcgtccagaatcctg 244 |||| |||||||||||||||||||||||||||||||| |||| Sbjct: 300 ggtaacgcccgcttgccatgtccaccatcgtccagaaccctg 341
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 542 atgggaggggataggaggaggaggaagag 570 |||||||||| |||||||||||||||||| Sbjct: 26211 atgggagggggtaggaggaggaggaagag 26183
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 542 atgggaggggataggaggaggaggaagag 570 |||||||||| |||||||||||||||||| Sbjct: 28018986 atgggagggggtaggaggaggaggaagag 28018958 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 321 ccccgcgacggcggcggctgcgtcgtc 347 |||||||||||||||||| |||||||| Sbjct: 27310187 ccccgcgacggcggcggcggcgtcgtc 27310213 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttg 577 ||||||||||||||||| |||||| Sbjct: 31077500 aggaggaggaggaagaggaggttg 31077523 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtaggttggtgg 581 ||||||||||||| ||| |||||||||| Sbjct: 18605008 aggaggaggaggaggaggaggttggtgg 18604981 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 cgacggcggcggctgcgtcgtcct 349 ||||||||||||| |||||||||| Sbjct: 6888810 cgacggcggcggcggcgtcgtcct 6888833
>ref|XM_473395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 321 ccccgcgacggcggcggctgcgtcgtc 347 |||||||||||||||||| |||||||| Sbjct: 965 ccccgcgacggcggcggcggcgtcgtc 939
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 321 ccccgcgacggcggcggctgcgtcgtc 347 |||||||||||||||||| |||||||| Sbjct: 46115 ccccgcgacggcggcggcggcgtcgtc 46141
>gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosome 6, complete sequence Length = 224416 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 544 gggaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||||| Sbjct: 194357 gggagggaataggaggaggaggaagag 194383
>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence Length = 200738 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 544 gggaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||||| Sbjct: 123392 gggagggaataggaggaggaggaagag 123366
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 gaggaggaagaagccggcgatggtggcggag 411 |||||||| |||||||||||||| ||||||| Sbjct: 10192911 gaggaggaggaagccggcgatggaggcggag 10192881 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cggtgcggcgcggcgtggcg 538 |||||||||||||||||||| Sbjct: 32399976 cggtgcggcgcggcgtggcg 32399995
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 gaggaggaagaagccggcgatggtggcggag 411 |||||||| |||||||||||||| ||||||| Sbjct: 65277 gaggaggaggaagccggcgatggaggcggag 65247
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 gaggaggaagaagccggcgatggtggcggag 411 |||||||| |||||||||||||| ||||||| Sbjct: 140605 gaggaggaggaagccggcgatggaggcggag 140575
>gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complete sequence Length = 193811 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 548 ggggataggaggaggaggaagag 570 ||||||||||||||||||||||| Sbjct: 142302 ggggataggaggaggaggaagag 142324
>ref|XM_482592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 220 gatggtggcggagaggaagatg 241
>ref|XM_507240.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016C11.34 mRNA Length = 2061 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 314 gatggtggcggagaggaagatg 335
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 380 ggaggaggaagaagccggcgatggtggcgg 409 |||||| ||||||| ||||||||||||||| Sbjct: 56144 ggaggaagaagaagacggcgatggtggcgg 56173
>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence Length = 252334 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 543 tgggaggggataggaggaggag 564 |||||||||||||||||||||| Sbjct: 17634 tgggaggggataggaggaggag 17613
>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence Length = 199679 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 ggaggggataggaggaggaggaagag 570 |||||||| ||||||||||||||||| Sbjct: 55785 ggaggggagaggaggaggaggaagag 55760
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgggaggggataggaggaggag 564 |||||||||||||||||||||| Sbjct: 39366 tgggaggggataggaggaggag 39387
>gb|DQ483833.1| Gymnogyps californianus clone 256F microsatellite sequence Length = 1251 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggt 575 |||||||||||||||||||||| Sbjct: 929 aggaggaggaggaagagtaggt 950
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence Length = 187246 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgggaggggataggaggaggag 564 |||||||||||||||||||||| Sbjct: 48671 tgggaggggataggaggaggag 48692
>gb|AC125321.4| Mus musculus BAC clone RP23-371B13 from chromosome 9, complete sequence Length = 196150 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 ggaggggataggaggaggaggaagag 570 |||| ||||||||||||||||||||| Sbjct: 44157 ggagtggataggaggaggaggaagag 44182
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 ggaggggataggaggaggaggaagag 570 |||| ||||||||||||||||||||| Sbjct: 1660 ggagtggataggaggaggaggaagag 1635
>emb|AL354828.12| Human DNA sequence from clone RP11-274P12 on chromosome 13 Contains a ferritin heavy polypeptide 1 (FTH1) pseudogene and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 (DDX39) (DDXL, MGC8471, MGC8203) pseudogene, complete sequence Length = 168114 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtaggttggt 579 ||||||||||||||||| |||||||| Sbjct: 69590 aggaggaggaggaagaggaggttggt 69565
>gb|AC093783.2| Homo sapiens BAC clone RP11-209D20 from 4, complete sequence Length = 121709 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 545 ggaggggataggaggaggaggaagagtagg 574 |||||||| ||||||||||||||||||||| Sbjct: 52204 ggagggga-aggaggaggaggaagagtagg 52176
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 21307956 gatggtggcggagaggaagatg 21307977 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ggaggaggaggaagagtagg 574 |||||||||||||||||||| Sbjct: 4575104 ggaggaggaggaagagtagg 4575085
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 ggaggggataggaggaggaggaagag 570 |||||||| ||||||||||||||||| Sbjct: 64440 ggaggggagaggaggaggaggaagag 64415
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 134233 gatggtggcggagaggaagatg 134254
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 7881 gatggtggcggagaggaagatg 7902
>dbj|AK105915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H08, full insert sequence Length = 1951 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 219 gatggtggcggagaggaagatg 240
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 380 ggaggaggaagaagccggcgatggtggcgg 409 |||||| ||||||| ||||||||||||||| Sbjct: 129 ggaggaagaagaagacggcgatggtggcgg 100
>dbj|AK101476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040O12, full insert sequence Length = 2061 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 399 gatggtggcggagaggaagatg 420 |||||||||||||||||||||| Sbjct: 314 gatggtggcggagaggaagatg 335
>gb|AC005691.1|AC005691 Homo sapiens chromosome 17, clone hRPK.28_A_22, complete sequence Length = 156821 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 545 ggaggggataggaggaggaggaagagtagg 574 |||||||| ||||||| ||||||||||||| Sbjct: 98922 ggaggggagaggaggaagaggaagagtagg 98893
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 380 ggaggaggaagaagccggcgatggtggcgg 409 |||||| ||||||| ||||||||||||||| Sbjct: 81 ggaggaagaagaagacggcgatggtggcgg 52
>gb|AC153490.1| Mus musculus BAC RP23-210M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 145026 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 129758 ggataggaggaggaggaagag 129738
>ref|NM_102115.1| Arabidopsis thaliana unknown protein AT1G22680 mRNA, complete cds Length = 558 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 gagaatgggaggggataggaggaggaggaagag 570 |||||| |||||| || |||||||||||||||| Sbjct: 128 gagaataggagggaattggaggaggaggaagag 96
>gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, complete sequence Length = 174894 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 127971 aggaggaggaggaagagtagg 127951
>gb|AC129023.4| Mus musculus BAC clone RP23-430E12 from chromosome 18, complete sequence Length = 185832 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 163971 aggaggaggaggaagagtagg 163991
>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence Length = 278715 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 gcacatctctaatcaaccaag 458 ||||||||||||||||||||| Sbjct: 106577 gcacatctctaatcaaccaag 106597
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence Length = 197143 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 71367 aggaggaggaggaagagtagg 71387
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 22808 aggaggaggaggaagagtagg 22828
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence Length = 173054 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 11311 aggaggaggaggaagagtagg 11331
>gb|DQ483866.1| Gymnogyps californianus clone 32G microsatellite sequence Length = 501 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 60 aggaggaggaggaagagtagg 80
>emb|CT009544.6| Mouse DNA sequence from clone RP23-32E1 on chromosome 13, complete sequence Length = 158218 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 144192 ggataggaggaggaggaagag 144212
>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence Length = 165307 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 546 gaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||| Sbjct: 109311 gaggggaaaggaggaggaggaagag 109335
>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence Length = 235544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 22500 aggaggaggaggaagagtagg 22480
>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete sequence Length = 177675 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 546 gaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||| Sbjct: 152752 gaggggaaaggaggaggaggaagag 152728
>gb|AC131729.3| Mus musculus BAC clone RP23-125B15 from 5, complete sequence Length = 209715 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 68154 aggaggaggaggaagagtagg 68134
>gb|AC156388.6| Mus musculus 10 BAC RP24-254P7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174315 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 89826 ggataggaggaggaggaagag 89806
>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173920 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 138790 ggataggaggaggaggaagag 138770
>gb|DQ132654.1| Arabidopsis thaliana clone 01544 hypothetical protein (At1g22680) mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 gagaatgggaggggataggaggaggaggaagag 570 |||||| |||||| || |||||||||||||||| Sbjct: 444 gagaataggagggaattggaggaggaggaagag 412
>gb|AC157912.4| Mus musculus chromosome 19, clone RP24-241F10, complete sequence Length = 153690 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 148960 aggaggaggaggaagagtagg 148980
>emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chromosome 1 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, complete sequence Length = 127370 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 121110 aggaggaggaggaagagtagg 121090
>gb|AC103453.7| Rattus norvegicus 13 BAC CH230-127N19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199669 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 62554 aggaggaggaggaagagtagg 62574
>gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosome 5, complete sequence Length = 204862 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 161165 aggaggaggaggaagagtagg 161185
>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24, complete sequence Length = 152545 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 139474 aggaggaggaggaagagtagg 139454
>emb|AL627444.10| Mouse DNA sequence from clone RP23-307A1 on chromosome 11 Contains the 5' end of the Gabrb2 gene for subunit beta 2 gamma-aminobutyric acid (GABA-A) receptor, complete sequence Length = 176814 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 66963 aggaggaggaggaagagtagg 66943
>emb|BX908740.5| Zebrafish DNA sequence from clone DKEY-88E10 in linkage group 1, complete sequence Length = 90443 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 85064 aggaggaggaggaagagtagg 85044
>gb|AC090163.10| Homo sapiens chromosome 11, clone RP11-706A13, complete sequence Length = 194642 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 546 gaggggataggaggaggaggaagag 570 |||||||| |||||||||||||||| Sbjct: 189592 gaggggatgggaggaggaggaagag 189616
>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a novel pseudogene, complete sequence Length = 195873 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 33526 aggaggaggaggaagagtagg 33546
>emb|AL805946.5| Mouse DNA sequence from clone RP23-127B1 on chromosome 4 Contains the 3' end of a novel gene, complete sequence Length = 133178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 13462 aggaggaggaggaagagtagg 13442
>emb|BX322537.14| Zebrafish DNA sequence from clone CH211-262H21 in linkage group 23, complete sequence Length = 26459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 10870 aggaggaggaggaagagtagg 10890
>gb|AC103854.2| Homo sapiens chromosome 11, clone RP11-104M24, complete sequence Length = 152529 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 546 gaggggataggaggaggaggaagag 570 |||||||| |||||||||||||||| Sbjct: 110921 gaggggatgggaggaggaggaagag 110945
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 114820 aggaggaggaggaagagtagg 114800
>gb|AC023590.8| Homo sapiens chromosome 8, clone RP11-655M22, complete sequence Length = 175582 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 545 ggagggga-taggaggaggaggaagagta 572 |||||||| |||||||||||||||||||| Sbjct: 24194 ggaggggagtaggaggaggaggaagagta 24222
>gb|AC159018.3| Pan troglodytes BAC clone CH251-533F3 from chromosome unknown, complete sequence Length = 179366 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 545 ggagggga-taggaggaggaggaagagta 572 |||||||| |||||||||||||||||||| Sbjct: 48997 ggaggggagtaggaggaggaggaagagta 49025
>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 126884 aggaggaggaggaagagtagg 126864
>gb|AF177767.1|AF177767 Mus musculus toll-like receptor 4 (Tlr4) gene, Tlr4A allele, complete cds Length = 91748 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 82945 aggaggaggaggaagagtagg 82925
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 aggaagaagccggcgatggtggcgg 409 ||||||||||||||| ||||||||| Sbjct: 509413 aggaagaagccggcggtggtggcgg 509437
>gb|AC155295.2| Mus musculus BAC clone RP24-329L16 from chromosome 13, complete sequence Length = 166534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 18627 ggataggaggaggaggaagag 18607
>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete sequence Length = 150383 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 31823 aggaggaggaggaagagtagg 31803
>gb|AC153870.8| Mus musculus 10 BAC RP23-473J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164663 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 555 ggaggaggaggaagagtaggttggt 579 |||||||||||||||| |||||||| Sbjct: 95137 ggaggaggaggaagaggaggttggt 95161
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete sequence Length = 84162 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 gagaatgggaggggataggaggaggaggaagag 570 |||||| |||||| || |||||||||||||||| Sbjct: 53359 gagaataggagggaattggaggaggaggaagag 53327
>gb|AE004535.1| Pseudomonas aeruginosa PAO1, section 96 of 529 of the complete genome Length = 11431 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 344 cgtcctggaacaggtccggctcggc 368 ||||||||||||||| ||||||||| Sbjct: 8280 cgtcctggaacaggttcggctcggc 8256
>emb|AL844528.13| Mouse DNA sequence from clone RP23-139H14 on chromosome 2, complete sequence Length = 132715 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 gggaggggataggaggaggaggaag 568 ||||||||| ||||||||||||||| Sbjct: 110477 gggaggggagaggaggaggaggaag 110453
>emb|BX682541.5| Mouse DNA sequence from clone RP23-349P20 on chromosome 2, complete sequence Length = 55982 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 47573 aggaggaggaggaagagtagg 47553
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 99055 aggaggaggaggaagagtagg 99035
>gb|AY924681.1| Arabidopsis thaliana hypothetical protein (At1g22680) gene, complete cds Length = 558 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 538 gagaatgggaggggataggaggaggaggaagag 570 |||||| |||||| || |||||||||||||||| Sbjct: 128 gagaataggagggaattggaggaggaggaagag 96
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 63987 aggaggaggaggaagagtagg 63967
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 19252 aggaggaggaggaagagtagg 19232
>gb|AC113008.9| Mus musculus chromosome 6, clone RP23-460E2, complete sequence Length = 229790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 227171 aggaggaggaggaagagtagg 227191
>gb|AC110258.25| Mus musculus chromosome 6, clone RP23-281L18, complete sequence Length = 169146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 47107 aggaggaggaggaagagtagg 47127
>gb|AC154215.1| Mus musculus BAC clone RP24-134E18 from 13, complete sequence Length = 171014 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 ggataggaggaggaggaagag 570 ||||||||||||||||||||| Sbjct: 8040 ggataggaggaggaggaagag 8060
>emb|CT009720.16| Mouse DNA sequence from clone RP23-21J17 on chromosome 9, complete sequence Length = 216098 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 25307 aggaggaggaggaagagtagg 25287
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 106314 aggaggaggaggaagagtagg 106294
>gb|AC133188.4| Mus musculus BAC clone RP23-330F6 from 13, complete sequence Length = 201730 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 546 gaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||| Sbjct: 30783 gaggggaaaggaggaggaggaagag 30759
>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete sequence Length = 181349 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 546 gaggggataggaggaggaggaagag 570 ||||||| ||||||||||||||||| Sbjct: 100787 gaggggaaaggaggaggaggaagag 100763
>emb|AL670292.9| Mouse DNA sequence from clone RP23-231H22 on chromosome X, complete sequence Length = 217063 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtagg 574 ||||||||||||||||||||| Sbjct: 182713 aggaggaggaggaagagtagg 182733
>dbj|AP003496.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1786D2 Length = 150409 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 545 ggagggga-taggaggaggaggaagagta 572 |||||||| |||||||||||||||||||| Sbjct: 36686 ggaggggagtaggaggaggaggaagagta 36658
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence Length = 23480 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cggcgttgaggccccggaggagga 388 ||||| |||||||||||||||||| Sbjct: 12772 cggcggtgaggccccggaggagga 12795
>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 cccatgttacaacttacaactgcc 57 ||||||| |||||||||||||||| Sbjct: 88214 cccatgtgacaacttacaactgcc 88237
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gcggtgcggcgcggcgtggcgaga 541 |||| ||||||||||||||||||| Sbjct: 132046 gcggcgcggcgcggcgtggcgaga 132069
>ref|XM_635370.1| Dictyostelium discoideum hypothetical protein (DDB0204250), partial mRNA Length = 3240 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 2847 aggaggaggaggaagagtag 2828
>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence Length = 249571 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 ggaggaggaagagtaggttg 577 |||||||||||||||||||| Sbjct: 124245 ggaggaggaagagtaggttg 124226
>ref|XM_474818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 cgacggcggcggctgcgtcgtcct 349 ||||||||||||| |||||||||| Sbjct: 73 cgacggcggcggcggcgtcgtcct 50
>ref|XM_467985.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 cggtgcggcgcggcgtggcg 538 |||||||||||||||||||| Sbjct: 62 cggtgcggcgcggcgtggcg 43
>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence Length = 185353 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 165629 aggaggaggaggaagagtag 165648
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 545 ggaggggataggaggaggaggaag 568 ||||||||||||| |||||||||| Sbjct: 1797406 ggaggggataggaagaggaggaag 1797429
>gb|AY017956.1| Oryza sativa microsatellite MRG0281 containing (AG)X17, genomic sequence Length = 234 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttggtgg 581 ||||||||||||| ||| |||||||||| Sbjct: 202 aggaggaggaggaggaggaggttggtgg 229
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtaggttg 577 ||||||||||||||||| |||||| Sbjct: 66858 aggaggaggaggaagaggaggttg 66835
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gcggtgcggcgcggcgtggcgaga 541 |||| ||||||||||||||||||| Sbjct: 3811 gcggcgcggcgcggcgtggcgaga 3834
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 taggaggaggaggaagagtaggtt 576 |||||||||||||| ||||||||| Sbjct: 12892 taggaggaggaggaggagtaggtt 12915
>gb|AC149683.2| Bos taurus BAC CH240-493H15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 176832 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 ggggataggaggaggaggaagagt 571 |||||||||||||| ||||||||| Sbjct: 91306 ggggataggaggagcaggaagagt 91283
>ref|XM_324156.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gaggaggaagaagccggcga 400 |||||||||||||||||||| Sbjct: 2538 gaggaggaagaagccggcga 2519
>ref|XM_955333.1| Neurospora crassa OR74A hypothetical protein (NCU04800.1) partial mRNA Length = 3285 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gaggaggaagaagccggcga 400 |||||||||||||||||||| Sbjct: 2538 gaggaggaagaagccggcga 2519
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cggcgttgaggccccggaggagga 388 ||||| |||||||||||||||||| Sbjct: 7468668 cggcggtgaggccccggaggagga 7468691 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 taggaggaggaggaagagtaggtt 576 |||||||||||||| ||||||||| Sbjct: 4829256 taggaggaggaggaggagtaggtt 4829279
>ref|XM_846295.1| PREDICTED: Canis familiaris similar to cytochrome P450, family 11, subfamily B, polypeptide 1 isoform 1 precursor (LOC609093), mRNA Length = 1689 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gaggccccggaggaggaaga 391 |||||||||||||||||||| Sbjct: 1177 gaggccccggaggaggaaga 1196
>ref|XM_845533.1| PREDICTED: Canis familiaris similar to cytochrome P450, subfamily XIB polypeptide 2 precursor (LOC608494), partial mRNA Length = 1439 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gaggccccggaggaggaaga 391 |||||||||||||||||||| Sbjct: 927 gaggccccggaggaggaaga 946
>gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosome 7, complete sequence Length = 196609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ggaggaggaggaagagtagg 574 |||||||||||||||||||| Sbjct: 108605 ggaggaggaggaagagtagg 108586
>gb|AC079306.7| Homo sapiens BAC clone CTD-2506A20 from 7, complete sequence Length = 70638 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catccccattctggcactcc 122 |||||||||||||||||||| Sbjct: 62513 catccccattctggcactcc 62532
>ref|XM_569873.1| Cryptococcus neoformans var. neoformans JEC21 rRNA primary transcript binding protein (CNC06110) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 545 ggaggggataggaggaggaggaag 568 ||||||||||||| |||||||||| Sbjct: 2236 ggaggggataggaagaggaggaag 2259
>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence Length = 224179 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 gaggggataggaggaggaggaaga 569 ||||||| |||||||||||||||| Sbjct: 213038 gaggggaaaggaggaggaggaaga 213015
>gb|AC133865.2| Homo sapiens chromosome 1 clone RP11-93N20, complete sequence Length = 78250 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 549 gggataggaggaggaggaagagta 572 ||||||||||||||||| |||||| Sbjct: 14969 gggataggaggaggagggagagta 14992
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cggcgttgaggccccggaggagga 388 ||||| |||||||||||||||||| Sbjct: 107223 cggcggtgaggccccggaggagga 107246
>gb|AC127579.4| Mus musculus BAC clone RP23-434O19 from chromosome 14, complete sequence Length = 181361 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cacaagatgtaaccaaaaca 88 |||||||||||||||||||| Sbjct: 9865 cacaagatgtaaccaaaaca 9846
>emb|CR356243.16| Zebrafish DNA sequence from clone CH211-209O4 in linkage group 6, complete sequence Length = 216472 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gaggccccggaggaggaaga 391 |||||||||||||||||||| Sbjct: 7898 gaggccccggaggaggaaga 7879
>emb|CR677026.2|CNS0FLCU Tetraodon nigroviridis full-length cDNA Length = 1024 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ggaggaggaggaagagtagg 574 |||||||||||||||||||| Sbjct: 417 ggaggaggaggaagagtagg 398
>gb|AC100953.12| Mus musculus chromosome 5, clone RP23-73P16, complete sequence Length = 216490 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 166758 aggaggaggaggaagagtag 166739
>gb|AC115747.8| Mus musculus chromosome 10, clone RP23-8P5, complete sequence Length = 193706 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 559 gaggaggaagagtaggttggtgga 582 |||||||||||| ||||||||||| Sbjct: 102607 gaggaggaagagaaggttggtgga 102630
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 aggggataggaggaggaggaagag 570 |||||| ||||||||||||||||| Sbjct: 137552 aggggagaggaggaggaggaagag 137575
>emb|AL356971.10| Human DNA sequence from clone RP11-58A9 on chromosome 6, complete sequence Length = 116576 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gaggaggaggaagagtaggt 575 |||||||||||||||||||| Sbjct: 78447 gaggaggaggaagagtaggt 78428
>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene and a CpG island, complete sequence Length = 178403 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gataggaggaggaggaagag 570 |||||||||||||||||||| Sbjct: 57262 gataggaggaggaggaagag 57281
>ref|XM_961986.1| PREDICTED: Tribolium castaneum similar to CG9484-PA (LOC655442), mRNA Length = 8550 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gaagccggcgatggtggcgg 409 |||||||||||||||||||| Sbjct: 1778 gaagccggcgatggtggcgg 1759
>gb|BC043270.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6, mRNA (cDNA clone IMAGE:5297025), complete cds Length = 3299 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catccccattctggcactcc 122 |||||||||||||||||||| Sbjct: 542 catccccattctggcactcc 561
>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence Length = 195633 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 ataggaggaggaggaagagtaggt 575 |||||||||||| ||||||||||| Sbjct: 118152 ataggaggaggaagaagagtaggt 118175
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttg 577 ||||||||||||||||| |||||| Sbjct: 59581 aggaggaggaggaagaggaggttg 59604
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 cgacggcggcggctgcgtcgtcct 349 ||||||||||||| |||||||||| Sbjct: 167139 cgacggcggcggcggcgtcgtcct 167162
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtaggttggtgg 581 ||||||||||||| ||| |||||||||| Sbjct: 72874 aggaggaggaggaggaggaggttggtgg 72847
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 cgacggcggcggctgcgtcgtcct 349 ||||||||||||| |||||||||| Sbjct: 51681 cgacggcggcggcggcgtcgtcct 51704
>emb|AL845362.4| Zebrafish DNA sequence from clone CH211-142H2 in linkage group 2 Contains a putative novel gene, a novel gene similar to PTF1 (pancreas transcription factor 1, subunit p48), a novel gene similar to DLGAP1 (discs, large (Drosophila) homolog-associated protein 1) and two CpG islands, complete sequence Length = 161465 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 555 ggaggaggaggaagagtaggttggtgga 582 |||||||||||||||| ||| ||||||| Sbjct: 150145 ggaggaggaggaagaggagggtggtgga 150172
>gb|AC008467.7| Homo sapiens chromosome 5 clone CTC-364D2, complete sequence Length = 106729 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 98 caaatcatccccattctggcactccagt 125 |||| ||||||||| ||||||||||||| Sbjct: 75266 caaaccatccccatcctggcactccagt 75239
>dbj|AK091294.1| Homo sapiens cDNA FLJ33975 fis, clone DFNES2002817, moderately similar to Mouse mRNA for RNA polymerase I associated factor (PAF53) Length = 2229 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catccccattctggcactcc 122 |||||||||||||||||||| Sbjct: 441 catccccattctggcactcc 460
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 taggaggaggaggaagagtaggtt 576 |||||||||||||| ||||||||| Sbjct: 6199 taggaggaggaggaggagtaggtt 6176
>gb|AC007306.15| Mus musculus strain RIII Fibroblast cell line C127 chromosome 6 clone mgsriii-p1_2, complete sequence Length = 78783 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttg 577 ||||||||||||||||| |||||| Sbjct: 77550 aggaggaggaggaagaggaggttg 77573
>gb|S80867.1| Ovis aries smooth muscle myosin light chain kinase mRNA, partial cds Length = 1317 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 ggggataggaggaggaggaagagt 571 ||||| |||||||||||||||||| Sbjct: 1292 ggggagaggaggaggaggaagagt 1315
>gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome 14, complete sequence Length = 215658 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aggggataggaggaggagga 566 |||||||||||||||||||| Sbjct: 128434 aggggataggaggaggagga 128415
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgttacaacttacaactgc 56 |||||||||||||||||||| Sbjct: 16242369 atgttacaacttacaactgc 16242350
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 518 gcggtgcggcgcggcgtggcgaga 541 |||| ||||||||||||||||||| Sbjct: 25269205 gcggcgcggcgcggcgtggcgaga 25269228
>gb|AC140132.3| Homo sapiens chromosome 5 clone RP11-1308L4, complete sequence Length = 185162 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 aggggataggaggaggaggaagag 570 ||||||||||||||||||| |||| Sbjct: 80480 aggggataggaggaggagggagag 80503
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cggcgttgaggccccggaggagga 388 ||||| |||||||||||||||||| Sbjct: 7466503 cggcggtgaggccccggaggagga 7466526 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 taggaggaggaggaagagtaggtt 576 |||||||||||||| ||||||||| Sbjct: 4829371 taggaggaggaggaggagtaggtt 4829394
>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone BACR09F18, complete sequence Length = 182525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cccggaggaggaagaagccggcga 400 |||||||||||||||||| ||||| Sbjct: 41873 cccggaggaggaagaagcaggcga 41850
>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone BACR14L13, complete sequence Length = 197348 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cccggaggaggaagaagccggcga 400 |||||||||||||||||| ||||| Sbjct: 196573 cccggaggaggaagaagcaggcga 196550
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence Length = 159741 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 gaggggataggaggaggaggaaga 569 ||||||| |||||||||||||||| Sbjct: 46806 gaggggaaaggaggaggaggaaga 46783
>gb|AC069213.22| Homo sapiens 3 BAC RP11-338O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171460 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 gaatgggaggggataggaggagga 563 ||||||||||| |||||||||||| Sbjct: 154746 gaatgggagggaataggaggagga 154723
>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192749 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 62318 aggaggaggaggaagagtag 62299
>gb|AC091946.5| Homo sapiens chromosome 5 clone RP11-360I2, complete sequence Length = 199128 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 aggggataggaggaggaggaagag 570 ||||||||||||||||||| |||| Sbjct: 152453 aggggataggaggaggagggagag 152476
>gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 73625 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 544 gggaggggataggaggaggaggaagagtaggt 575 ||||||||| ||||||||||||| ||| |||| Sbjct: 25018 gggaggggagaggaggaggaggaggaggaggt 25049
>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds Length = 80367 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 58295 aggaggaggaggaagagtag 58276
>gb|AC107885.5| Homo sapiens chromosome 8, clone CTD-2552G2, complete sequence Length = 163298 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gataggaggaggaggaagag 570 |||||||||||||||||||| Sbjct: 147212 gataggaggaggaggaagag 147231
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ggaggaggaggaagagtagg 574 |||||||||||||||||||| Sbjct: 98952 ggaggaggaggaagagtagg 98933
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gaagccggcgatggtggcgg 409 |||||||||||||||||||| Sbjct: 818491 gaagccggcgatggtggcgg 818472
>gb|AC008967.3|AC008967 Homo sapiens chromosome 5 clone CTD-2367A17, complete sequence Length = 88958 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 agatgtaaccaaaacagatacaat 96 |||||||| ||||||||||||||| Sbjct: 39750 agatgtaatcaaaacagatacaat 39727
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgttacaacttacaactgc 56 |||||||||||||||||||| Sbjct: 58885 atgttacaacttacaactgc 58866
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgttacaacttacaactgc 56 |||||||||||||||||||| Sbjct: 146970 atgttacaacttacaactgc 146951
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cggtgcggcgcggcgtggcg 538 |||||||||||||||||||| Sbjct: 61489 cggtgcggcgcggcgtggcg 61508
>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1079_F11 Length = 122402 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cggtgcggcgcggcgtggcg 538 |||||||||||||||||||| Sbjct: 3369 cggtgcggcgcggcgtggcg 3388
>dbj|AK103261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124D08, full insert sequence Length = 2161 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttggtgg 581 ||||||||||||| ||| |||||||||| Sbjct: 862 aggaggaggaggaggaggaggttggtgg 889
>dbj|AK100577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H18, full insert sequence Length = 2420 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 atgttacaacttacaactgc 56 |||||||||||||||||||| Sbjct: 2380 atgttacaacttacaactgc 2361
>dbj|AK069457.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019M11, full insert sequence Length = 1508 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtaggttggtgg 581 ||||||||||||| ||| |||||||||| Sbjct: 867 aggaggaggaggaggaggaggttggtgg 894
>gb|AC154858.2| Mus musculus BAC clone RP23-12P20 from 14, complete sequence Length = 180592 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cacaagatgtaaccaaaaca 88 |||||||||||||||||||| Sbjct: 73578 cacaagatgtaaccaaaaca 73597
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 547 aggggataggaggaggaggaagagtagg 574 ||||| ||||||||||||| |||||||| Sbjct: 41684 aggggctaggaggaggagggagagtagg 41657
>emb|AL645755.20| Zebrafish DNA sequence from clone RP71-1N18 in linkage group 22, complete sequence Length = 141779 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 ataggaggaggaggaagagtaggt 575 ||||||||||||||||||| |||| Sbjct: 76609 ataggaggaggaggaagaggaggt 76632
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 cgacggcggcggctgcgtcgtcct 349 ||||||||||||| |||||||||| Sbjct: 80468 cgacggcggcggcggcgtcgtcct 80491
>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete sequence Length = 239049 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cccggaggaggaagaagccggcga 400 |||||||||||||||||| ||||| Sbjct: 172252 cccggaggaggaagaagcaggcga 172229
>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete sequence Length = 197360 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 gggaggggataggaggaggaggaa 567 |||||||||||| ||||||||||| Sbjct: 33936 gggaggggatagaaggaggaggaa 33913
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 554 aggaggaggaggaagagtaggttg 577 ||||||||||||||||| |||||| Sbjct: 177568 aggaggaggaggaagaggaggttg 177545
>emb|AL832124.1|HSM803431 Homo sapiens mRNA; cDNA DKFZp686C0910 (from clone DKFZp686C0910) Length = 5249 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 catccccattctggcactcc 122 |||||||||||||||||||| Sbjct: 2431 catccccattctggcactcc 2450
>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence Length = 232607 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ggaggaggaagagtaggttg 577 |||||||||||||||||||| Sbjct: 213420 ggaggaggaagagtaggttg 213439
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 aggggataggaggaggagga 566 |||||||||||||||||||| Sbjct: 104926 aggggataggaggaggagga 104945
>gb|AC172194.1| Mus musculus BAC clone CH36-165I3 from chromosome 9, complete sequence Length = 197712 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ggaggaggaggaagagtagg 574 |||||||||||||||||||| Sbjct: 168428 ggaggaggaggaagagtagg 168409
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 aggggataggaggaggaggaagagtagg 574 ||||| ||||||||||||| |||||||| Sbjct: 20009 aggggctaggaggaggagggagagtagg 20036
>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence Length = 188464 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 aggaggaggaggaagagtag 573 |||||||||||||||||||| Sbjct: 98957 aggaggaggaggaagagtag 98976
>emb|AL627345.11| Mouse DNA sequence from clone RP23-169E7 on chromosome 4, complete sequence Length = 73565 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 gagaatgggaggggataggaggag 561 ||||||||||||||| |||||||| Sbjct: 16813 gagaatgggaggggacaggaggag 16836 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,406,166 Number of Sequences: 3902068 Number of extensions: 5406166 Number of successful extensions: 214679 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 210991 Number of HSP's gapped (non-prelim): 3687 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
