ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19h12 |
|---|---|
| Clone Library Name | barley_pub |
>LPP3_ARATH (Q8LFD1) Putative lipid phosphate phosphatase 3, chloroplast| precursor (EC 3.1.3.-) (AtLPP3) (Phosphatidic acid phosphatase 3) (Phosphatidate phosphohydrolase 3) Length = 364 Score = 210 bits (535), Expect = 3e-54 Identities = 93/129 (72%), Positives = 109/129 (84%) Frame = -1 Query: 692 GRQVYDQVTGGVICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHV 513 G+ +YD + G VICHG K + +G KSFPSGHTSWSF+G GFLSLYLSGKIQAFD KGHV Sbjct: 186 GKALYDSL-GDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHV 244 Query: 512 AKLCIVILPLLLASLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFFPPPYHHQGWG 333 AKLCIVILPLL A+LVGISR+D+Y HHW+DVF GGL+G ++ +CYL FFPPPYH +GWG Sbjct: 245 AKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWG 304 Query: 332 PYAYFHMLE 306 PYAYF +LE Sbjct: 305 PYAYFQVLE 313
>LPP1_ARATH (Q9ZU49) Lipid phosphate phosphatase 1 (EC 3.1.3.-) (AtLPP1)| (Phosphatidic acid phosphatase 1) (AtPAP1) (Prenyl diphosphate phosphatase) Length = 327 Score = 194 bits (493), Expect = 2e-49 Identities = 86/130 (66%), Positives = 104/130 (80%) Frame = -1 Query: 692 GRQVYDQVTGGVICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHV 513 G+++YD + GGV+CHGK + +G KSFPSGHTSWSFAG FLSLYLSGKI+AF+ +GHV Sbjct: 161 GKELYDAL-GGVVCHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNNEGHV 219 Query: 512 AKLCIVILPLLLASLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFFPPPYHHQGWG 333 AKLC+VI PLL A LVGISR+D+Y HHW+DVF G LIG +VA CY F+P PYH +GWG Sbjct: 220 AKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGTLVAAFCYRQFYPNPYHEEGWG 279 Query: 332 PYAYFHMLEE 303 PYAYF +E Sbjct: 280 PYAYFKAAQE 289
>LPP2_ARATH (Q9XI60) Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2)| (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase) Length = 290 Score = 193 bits (491), Expect = 4e-49 Identities = 86/130 (66%), Positives = 103/130 (79%) Frame = -1 Query: 692 GRQVYDQVTGGVICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHV 513 G ++ VT V+C G K + +G KSFPSGHTSWSFAG GFLSLYLSGKI+ FD++GHV Sbjct: 136 GIGIFHNVTKNVLCTGAKDVVKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDQRGHV 195 Query: 512 AKLCIVILPLLLASLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFFPPPYHHQGWG 333 AKLCIVILPLL+A+LVG+SR+D+Y HHW+DVF G +IG VA CYL FFPPPY GWG Sbjct: 196 AKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFCYLQFFPPPYDPDGWG 255 Query: 332 PYAYFHMLEE 303 P+AYF ML + Sbjct: 256 PHAYFQMLAD 265
>DPP1_YEAST (Q05521) Diacylglycerol pyrophosphate phosphatase 1 (EC 3.1.3.-)| (DGPP phosphatase) (Phosphatidate phosphatase) (EC 3.1.3.4) Length = 289 Score = 81.3 bits (199), Expect = 3e-15 Identities = 39/92 (42%), Positives = 58/92 (63%) Frame = -1 Query: 632 LTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLASLVGISR 453 L DG ++ PSGH+S SFAG G+L +L G++ + + + LPLL A+L+ +SR Sbjct: 158 LLDGFRTTPSGHSSESFAGLGYLYFWLCGQLLTESPLMPLWRKMVAFLPLLGAALIALSR 217 Query: 452 IDNYRHHWEDVFVGGLIGYIVAVLCYLHFFPP 357 +YRHH+ DV +G ++GYI+A Y FPP Sbjct: 218 TQDYRHHFVDVILGSMLGYIMAHFFYRRIFPP 249
>LPP1_RAT (O08564) Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP-2a) (PAP2-alpha) Length = 282 Score = 69.3 bits (168), Expect = 1e-11 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 3/99 (3%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 +C G + + +GR SF SGH+S+S F++LYL ++ KG A+L +L L Sbjct: 152 VCQGNEQKVREGRLSFYSGHSSFSMYCMLFVALYLQARM-----KGDWARLLRPMLQFGL 206 Query: 476 ASL---VGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLH 369 +L VG+SR+ +Y+HHW DV +G + G +VA+L L+ Sbjct: 207 VALSIYVGLSRVSDYKHHWSDVLIGLIQGAVVAILVVLY 245
>LPP1_CAVPO (O88956) Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP-2a) (PAP2-alpha) Length = 285 Score = 65.5 bits (158), Expect = 1e-10 Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 3/95 (3%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILP--L 483 +C G + +GR SF SGH+S+S F++LYL ++ KG A+L L L Sbjct: 152 VCRGNAEKVKEGRLSFYSGHSSFSMYCMVFVALYLQARM-----KGDWARLLRPTLQFGL 206 Query: 482 LLASL-VGISRIDNYRHHWEDVFVGGLIGYIVAVL 381 + AS+ VG+SRI +Y+HHW DV G + G IVA+L Sbjct: 207 VAASIYVGLSRISDYKHHWSDVLTGLIQGAIVAIL 241
>LPP1_MOUSE (Q61469) Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP-2a) (PAP2-alpha) (Hydrogen peroxide-inducible protein 53) (Hic53) (35-kDa PAP) (mPAP) Length = 283 Score = 64.3 bits (155), Expect = 3e-10 Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 3/99 (3%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 IC G + + +GR SF SGH+S+S F++LYL ++ KG A+L +L L Sbjct: 152 ICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVALYLQARM-----KGDWARLLRPMLQFGL 206 Query: 476 ASL---VGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLH 369 + VG+SR+ +Y+HHW DV VG + G +A+L L+ Sbjct: 207 IAFSIYVGLSRVSDYKHHWSDVTVGLIQGAAMAILVALY 245
>LPP2_HUMAN (O43688) Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2c) (Phosphatidate phosphohydrolase type 2c) (PAP2c) (PAP-2c) (PAP2-gamma) (PAP2-G) Length = 288 Score = 63.9 bits (154), Expect = 4e-10 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 +C G +T+ R SF SGH+S+ FL+LY+ ++ + + + + + Sbjct: 149 VCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCW--KWARLLRPTVQFFLVAF 206 Query: 476 ASLVGISRIDNYRHHWEDVFVGGLIGYIVAVL--CYLHFF---PPPYH 348 A VG +R+ +Y+HHW DV VG L G +VA L CY+ F PP H Sbjct: 207 ALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDFFKARPPQH 254
>LPP1_HUMAN (O14494) Lipid phosphate phosphohydrolase 1 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2a) (Phosphatidate phosphohydrolase type 2a) (PAP2a) (PAP-2a) (PAP2-alpha) Length = 284 Score = 63.9 bits (154), Expect = 4e-10 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 3/95 (3%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 IC G + +GR SF SGH+S+S F++LYL ++ KG A+L L L Sbjct: 152 ICRGNAERVKEGRLSFYSGHSSFSMYCMLFVALYLQARM-----KGDWARLLRPTLQFGL 206 Query: 476 ASL---VGISRIDNYRHHWEDVFVGGLIGYIVAVL 381 ++ VG+SR+ +Y+HHW DV G + G +VA+L Sbjct: 207 VAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAIL 241
>WUN_DROME (Q9V576) Putative phosphatidate phosphatase (EC 3.1.3.4)| (Phosphatidic acid phosphatase type 2) (Protein wunen) (Germ cell guidance factor) Length = 379 Score = 62.0 bits (149), Expect = 2e-09 Identities = 31/84 (36%), Positives = 51/84 (60%) Frame = -1 Query: 632 LTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLASLVGISR 453 L + R SFPSGH+S++F +L+LYL ++ R + + + L +++A +SR Sbjct: 260 LKEMRLSFPSGHSSFTFFAMVYLALYLQARMTW--RGSKLLRHLLQFLFIMVAWYTALSR 317 Query: 452 IDNYRHHWEDVFVGGLIGYIVAVL 381 + +Y+HHW DV G LIG I A++ Sbjct: 318 VSDYKHHWSDVLAGSLIGSISALV 341
>LPP2_RAT (Q8K593) Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2c) (Phosphatidate phosphohydrolase type 2c) (PAP2c) (PAP-2c) (PAP2-gamma) (PAP2-G) Length = 276 Score = 57.4 bits (137), Expect = 4e-08 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 +C G +T+ R SF SGH+S+ FL+LY+ ++ + + + + + Sbjct: 148 VCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYVQARLCW--KWARLLRPTVQFFLVAF 205 Query: 476 ASLVGISRIDNYRHHWEDVFVGGLIGYIVAVL--CYLHFF 363 A VG +R+ + +HHW DV VG L G +VA L CY+ F Sbjct: 206 AIYVGYTRVSDNKHHWSDVLVGLLQGALVACLTVCYVSDF 245
>LPP2_MOUSE (Q9DAX2) Lipid phosphate phosphohydrolase 2 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2c) (Phosphatidate phosphohydrolase type 2c) (PAP2c) (PAP-2c) (PAP2-gamma) (PAP2-G) Length = 276 Score = 56.6 bits (135), Expect = 7e-08 Identities = 30/92 (32%), Positives = 50/92 (54%) Frame = -1 Query: 656 ICHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLL 477 +C G +T+ R SF SGH+S+ FL+LY+ ++ + + + + + Sbjct: 148 VCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYVQARLCW--KWARLLRPTVQFFLVAF 205 Query: 476 ASLVGISRIDNYRHHWEDVFVGGLIGYIVAVL 381 A VG +R+ +++HHW DV VG L G +VA L Sbjct: 206 AIYVGYTRVSDHKHHWSDVLVGLLQGALVACL 237
>LPP3_RAT (P97544) Lipid phosphate phosphohydrolase 3 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2b) (Phosphatidate phosphohydrolase type 2b) (PAP2b) (PAP-2b) (PAP2-beta) (Differentially expressed in rat intestine 42) (Dri42) Length = 312 Score = 54.7 bits (130), Expect = 3e-07 Identities = 33/97 (34%), Positives = 50/97 (51%) Frame = -1 Query: 653 CHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLA 474 C G+ + + RKSF SGH S+S +L LYL + R + + + L++A Sbjct: 182 CRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQARFTW--RGARLLRPLLQFTLLMMA 239 Query: 473 SLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFF 363 G+SR+ +Y+HH DV G G +VA C + FF Sbjct: 240 FYTGLSRVSDYKHHPSDVLAGFAQGALVA--CCIVFF 274
>LPP3_MOUSE (Q99JY8) Lipid phosphate phosphohydrolase 3 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2b) (Phosphatidate phosphohydrolase type 2b) (PAP2b) (PAP-2b) (PAP2-beta) Length = 312 Score = 54.7 bits (130), Expect = 3e-07 Identities = 33/97 (34%), Positives = 50/97 (51%) Frame = -1 Query: 653 CHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLA 474 C G+ + + RKSF SGH S+S +L LYL + R + + + L++A Sbjct: 182 CRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQARFTW--RGARLLRPLLQFTLLMMA 239 Query: 473 SLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFF 363 G+SR+ +Y+HH DV G G +VA C + FF Sbjct: 240 FYTGLSRVSDYKHHPSDVLAGFAQGALVA--CCIVFF 274
>LPP3_HUMAN (O14495) Lipid phosphate phosphohydrolase 3 (EC 3.1.3.4)| (Phosphatidic acid phosphatase 2b) (Phosphatidate phosphohydrolase type 2b) (PAP2b) (PAP-2b) (PAP2-beta) (Vascular endothelial growth factor and type I collagen-inducible protein) (VCIP) Length = 311 Score = 51.2 bits (121), Expect = 3e-06 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = -1 Query: 653 CHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLA 474 C G + + RKSF SGH S+S +L LYL + R + + + +++A Sbjct: 181 CRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTW--RGARLLRPLLQFTLIMMA 238 Query: 473 SLVGISRIDNYRHHWEDVFVGGLIGYIVAVLCYLHFF 363 G+SR+ +++HH DV G G +VA C + FF Sbjct: 239 FYTGLSRVSDHKHHPSDVLAGFAQGALVA--CCIVFF 273
>LPP1_YEAST (Q04396) Lipid phosphate phosphatase 1 (EC 3.1.3.-) (Phosphatidate| phosphatase) (EC 3.1.3.4) Length = 274 Score = 50.8 bits (120), Expect = 4e-06 Identities = 31/89 (34%), Positives = 49/89 (55%) Frame = -1 Query: 641 KGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLASLVG 462 K L +G KS PSGH+S+ + GF L+ + F + + CI LLA +V Sbjct: 175 KWILYEGLKSTPSGHSSFIVSTMGFTYLWQ----RVFTTRN--TRSCIWCP--LLALVVM 226 Query: 461 ISRIDNYRHHWEDVFVGGLIGYIVAVLCY 375 +SR+ ++RHHW DV G ++ ++V C+ Sbjct: 227 VSRVIDHRHHWYDVVSGAVLAFLVIYCCW 255
>YSX3_CAEEL (Q10022) Hypothetical protein T28D9.3| Length = 341 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Frame = -1 Query: 653 CHGKKGFLTDGRKSFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVI-----L 489 C G + + RKSF SGH++ S + +LY+ ++ G V IV+ L Sbjct: 179 CTGPPELVLEARKSFYSGHSAVSLYCATWSALYIQARL------GPVLNNRIVVPISQTL 232 Query: 488 PLLLASLVGISRIDNYRHHWEDVFVGGLIGYIVAV 384 ++ + SRI + +HHW DV VG IG +AV Sbjct: 233 MFMIGLGISFSRITDNKHHWSDVLVGIFIGIFLAV 267
>DOPP1_MOUSE (Q9JMF7) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Dolichyl| pyrophosphate phosphatase 1) (Protein 2-23) Length = 238 Score = 38.5 bits (88), Expect = 0.020 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Frame = -1 Query: 608 PSGHTS--WSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLAS-LVGISRIDNYR 438 PS H+ W F+ + FL LYL R + ++ L LL A+ LV SR+ Sbjct: 100 PSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLTAAFLVSYSRVYLLY 159 Query: 437 HHWEDVFVGGLIGYIVAVLCYL 372 H W VF GG+ G ++AV ++ Sbjct: 160 HTWSQVFYGGVAGSLMAVAWFI 181
>DOPP1_HUMAN (Q86YN1) Dolichyldiphosphatase 1 (EC 3.6.1.43) (Dolichyl| pyrophosphate phosphatase 1) Length = 238 Score = 35.8 bits (81), Expect = 0.13 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Frame = -1 Query: 608 PSGHTS--WSFAGFGFLSLYL----SGKIQAFDRKG-HVAKLCIVILPLLLASLVGISRI 450 PS H+ W F+ + FL LYL + + D HV L + L +A LV SR+ Sbjct: 100 PSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGL----LAVAFLVSYSRV 155 Query: 449 DNYRHHWEDVFVGGLIGYIVAVLCYL 372 H W V GG+ G ++A+ ++ Sbjct: 156 YLLYHTWSQVLYGGIAGGLMAIAWFI 181
>BCRC_BACLI (P42334) Bacitracin transport permease protein BCRC| Length = 203 Score = 32.3 bits (72), Expect = 1.4 Identities = 29/80 (36%), Positives = 40/80 (50%) Frame = -1 Query: 614 SFPSGHTSWSFAGFGFLSLYLSGKIQAFDRKGHVAKLCIVILPLLLASLVGISRIDNYRH 435 SFPS HT F+ GFL ++L K + L L+LA VGISRI + H Sbjct: 102 SFPSDHTILFFS-IGFL-IFLFHKKTGW-------------LWLVLAFAVGISRIWSGVH 146 Query: 434 HWEDVFVGGLIGYIVAVLCY 375 + DV G L+G + A+ + Sbjct: 147 YPLDVAAGALLGVLSALFVF 166
>DYH11_HUMAN (Q96DT5) Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy| chain 11) Length = 4523 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = -2 Query: 307 RSLRRPIQIMHKTNSLQVSIISD*PANTITGDQEMIWN-LELCNSPLRVAYLLQ*ACLIF 131 R LRR IQ + +T Q I+ +TI +IW+ + N+P RV LLQ C +F Sbjct: 340 RPLRRHIQCLQETEFPQTRILIAPLFHTIC----LIWSHSKFYNTPARVIVLLQEFCNLF 395 Query: 130 FNVCT 116 N T Sbjct: 396 INQAT 400 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 107,541,858 Number of Sequences: 219361 Number of extensions: 2372024 Number of successful extensions: 5938 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5923 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
