ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193728.1| Oryza sativa (japonica cultivar-group), predic... 248 2e-62
2gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partia... 248 2e-62
3dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependen... 234 3e-58
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
6dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
7gb|AY109053.1| Zea mays PCO106983 mRNA sequence 135 2e-28
8emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chr... 44 0.53
9gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete se... 42 2.1
10emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chr... 42 2.1
11emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in... 42 2.1
12gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, co... 42 2.1
13gb|AC080093.6| Homo sapiens BAC clone RP11-957J11 from 7, comple... 42 2.1
14emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, c... 42 2.1
15gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome... 40 8.2
16gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete seq... 40 8.2
17emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in ... 40 8.2
18gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, comp... 40 8.2
19gb|AC134303.2| Homo sapiens chromosome 19 clone LLNLR-265H6, com... 40 8.2
20gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 8.2
21gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complet... 40 8.2
22ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carbo... 40 8.2
23gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamid... 40 8.2
24gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, comple... 40 8.2
25gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete seq... 40 8.2
26emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on ch... 40 8.2
27emb|AL096707.13|HSJ729N16 Human DNA sequence from clone RP4-729N... 40 8.2
28emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on ch... 40 8.2
29emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417 40 8.2
30emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, ... 40 8.2
31gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, com... 40 8.2
32gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, comp... 40 8.2
33dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein 40 8.2
34gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 40 8.2
35gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, comple... 40 8.2
36gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, compl... 40 8.2
37gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, com... 40 8.2
38ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoam... 40 8.2
39dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.2
40dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 8.2
41gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence 40 8.2
42emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, co... 40 8.2
43dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.2
44dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells ... 40 8.2
45gb|AC003111.1|AC003111 Human DNA from chromosome 19-specific cos... 40 8.2
46dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full... 40 8.2
47ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, ... 40 8.2
48dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.2
49gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, compl... 40 8.2
50gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete se... 40 8.2
51dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minu... 40 8.2
52emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in... 40 8.2
53emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in ... 40 8.2
54emb|CR456625.13| Zebrafish DNA sequence from clone DKEY-76G24 in... 40 8.2
55emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-8... 40 8.2
56dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.2
57gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 m... 40 8.2
58emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, comple... 40 8.2
59emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on ch... 40 8.2
60emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chro... 40 8.2
61gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, co... 40 8.2
62dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.2
63dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.2 
>ref|NM_193728.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 351 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 919 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 860

                                                                       
Query: 411 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 859 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 800

                                                                       
Query: 471 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 799 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 740

                                                                       
Query: 531 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 739 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 680

                        
Query: 591 caatctgctcttc 603
           |||||||||||||
Sbjct: 679 caatctgctcttc 667
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>gb|AF450251.1|AF450251 Oryza sativa blast-resistant mRNA, partial sequence
          Length = 613

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 351 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 369 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 310

                                                                       
Query: 411 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 309 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 250

                                                                       
Query: 471 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 249 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 190

                                                                       
Query: 531 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 189 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 130

                        
Query: 591 caatctgctcttc 603
           |||||||||||||
Sbjct: 129 caatctgctcttc 117
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>dbj|AK102473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H09, full
           insert sequence
          Length = 1257

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 351 ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
           |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 987 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 928

                                                                       
Query: 411 ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
           | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 927 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 868

                                                                       
Query: 471 gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
           |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 867 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 808

                                                                       
Query: 531 ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
            ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 807 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 748

                        
Query: 591 caatctgctcttc 603
           |||||||||||||
Sbjct: 747 caatctgctcttc 735
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>gb|AF514859.1| Oryza sativa (indica cultivar-group) ATP-dependent Clp protease
            (Pi-HIT-1) gene, complete cds
          Length = 2750

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                        
Query: 351  ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
            |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 2182 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 2123

                                                                        
Query: 411  ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
            | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 2122 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 2063

                                                                        
Query: 471  gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
            |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 2062 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 2003

                                                                        
Query: 531  ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
             ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 2002 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 1943

                  
Query: 591  caatct 596
            ||||||
Sbjct: 1942 caatct 1937
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                            
Query: 351      ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
                |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 17747747 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 17747688

                                                                            
Query: 411      ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
                | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 17747687 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 17747628

                                                                            
Query: 471      gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
                |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 17747627 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 17747568

                                                                            
Query: 531      ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
                 ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 17747567 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 17747508

                      
Query: 591      caatct 596
                ||||||
Sbjct: 17747507 caatct 17747502
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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score =  234 bits (118), Expect = 3e-58
 Identities = 214/246 (86%)
 Strand = Plus / Minus

                                                                          
Query: 351    ctccacttacgctgccattaccatttcgaatgagcttttcctctgaaggtagatttttca 410
              |||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 129282 ctccacttgcactgccattaccattttgaataagcttctcctctgaaggtagatttttca 129223

                                                                          
Query: 411    ttatttttctagttggtcctgaagcgttccacaagtaccacatacgtgattttgggggtg 470
              | ||||||||||||||||||||||| ||||| |||||||||| ||| |||||||| ||||
Sbjct: 129222 tgatttttctagttggtcctgaagcattccataagtaccacacacgcgattttggaggtg 129163

                                                                          
Query: 471    gcacagctcccgatacaggagctaccaatccaagttttccctcgtctataatgctgtcaa 530
              |||||||||| |  | |||||| ||||| ||  | || || || ||||||| ||||||||
Sbjct: 129162 gcacagctcctgccaaaggagcaaccaaccccggcttcccttcatctataacgctgtcaa 129103

                                                                          
Query: 531    ttattccataatccttggcctcccaaggactcatgaaagagtcgaacctcgtgtcctcat 590
               ||| |||||||||||||| |||||||||||||||||| |||| ||| | || |||||||
Sbjct: 129102 ctatgccataatccttggcttcccaaggactcatgaaatagtcaaactttgtatcctcat 129043

                    
Query: 591    caatct 596
              ||||||
Sbjct: 129042 caatct 129037
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>gb|AY109053.1| Zea mays PCO106983 mRNA sequence
          Length = 704

 Score =  135 bits (68), Expect = 2e-28
 Identities = 221/272 (81%)
 Strand = Plus / Plus

                                                                       
Query: 329 gcctccttcagcattccatcagctccacttacgctgccattaccatttcgaatgagcttt 388
           |||||||| ||| |||||||| ||||| || | || || ||||||||  |||| || || 
Sbjct: 176 gcctccttgagctttccatcatctccagttgcacttccgttaccattgtgaattagtttc 235

                                                                       
Query: 389 tcctctgaaggtagatttttcattatttttctagttggtcctgaagcgttccacaagtac 448
           |||||||||||||||| |||||| || || || || || || ||||| ||||||||||||
Sbjct: 236 tcctctgaaggtagatgtttcatgatcttcctggtcggccccgaagccttccacaagtac 295

                                                                       
Query: 449 cacatacgtgattttgggggtggcacagctcccgatacaggagctaccaatccaagtttt 508
           |||| ||| ||||| || || || |||| ||| |  |  ||||||||||| ||  |||| 
Sbjct: 296 cacacacgcgatttgggaggcggaacagatcctgccaagggagctaccaaccctggtttc 355

                                                                       
Query: 509 ccctcgtctataatgctgtcaattattccataatccttggcctcccaaggactcatgaaa 568
           ||||| ||||| ||  |||||| ||| |||||||||||||| ||| ||||||||||||||
Sbjct: 356 ccctcatctatgatattgtcaactatcccataatccttggcttccgaaggactcatgaaa 415

                                           
Query: 569 gagtcgaacctcgtgtcctcatcaatctgctc 600
            | || ||| ||||||| ||||||||||||||
Sbjct: 416 taatcaaacttcgtgtcttcatcaatctgctc 447
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>emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chromosome 9 Contains the
             3' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB), complete sequence
          Length = 171629

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 406   tttcattatttttctagttggt 427
             ||||||||||||||||||||||
Sbjct: 49835 tttcattatttttctagttggt 49856
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>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   gaaaaataatattacaataca 164
             |||||||||||||||||||||
Sbjct: 19341 gaaaaataatattacaataca 19321
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>emb|AL596327.5| Human DNA sequence from clone RP11-110F24 on chromosome 1, complete
             sequence
          Length = 94737

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   tttttcattatttttctagtt 424
             |||||||||||||||||||||
Sbjct: 33427 tttttcattatttttctagtt 33447
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>emb|BX571721.8| Zebrafish DNA sequence from clone DKEY-250L23 in linkage group 8,
              complete sequence
          Length = 168402

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 378    gaatgagcttttcctctgaag 398
              |||||||||||||||||||||
Sbjct: 132435 gaatgagcttttcctctgaag 132415
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>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence
          Length = 174906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   tatacaggaaaaataatatta 157
             |||||||||||||||||||||
Sbjct: 81071 tatacaggaaaaataatatta 81051
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>gb|AC080093.6| Homo sapiens BAC clone RP11-957J11 from 7, complete sequence
          Length = 37522

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tagacaaaaacaagtatacac 55
             |||||||||||||||||||||
Sbjct: 23589 tagacaaaaacaagtatacac 23609
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>emb|BX005018.8| Zebrafish DNA sequence from clone DKEY-209K18, complete sequence
          Length = 183614

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 378    gaatgagcttttcctctgaag 398
              |||||||||||||||||||||
Sbjct: 111781 gaatgagcttttcctctgaag 111761
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>gb|AC167362.2| Mus musculus BAC clone RP23-74P17 from chromosome 7, complete sequence
          Length = 215537

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    aggaaaaataatattacaat 161
              ||||||||||||||||||||
Sbjct: 176658 aggaaaaataatattacaat 176639
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>gb|AF038615.1| Caenorhabditis elegans cosmid R02D3, complete sequence
          Length = 32218

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 375 ttcgaatgagcttttcctctgaag 398
           ||||| ||||||||||||||||||
Sbjct: 605 ttcgattgagcttttcctctgaag 628
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>emb|CR391993.14| Zebrafish DNA sequence from clone DKEY-3E17 in linkage group 22,
             complete sequence
          Length = 122651

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   agatcaataaatcaaccgtataca 142
             ||||||||||||||||| ||||||
Sbjct: 64421 agatcaataaatcaaccatataca 64398
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>gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, complete sequence
          Length = 209787

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   gcactgcaagatcaataaat 130
             ||||||||||||||||||||
Sbjct: 71760 gcactgcaagatcaataaat 71779
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>gb|AC134303.2| Homo sapiens chromosome 19 clone LLNLR-265H6, complete sequence
          Length = 42236

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 583   gtcctcatcaatctgctctt 602
             ||||||||||||||||||||
Sbjct: 16054 gtcctcatcaatctgctctt 16035
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>gb|BC061232.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone IMAGE:6535602), complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>gb|AC122046.2| Mus musculus BAC clone RP24-449N4 from 7, complete sequence
          Length = 150101

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   aggaaaaataatattacaat 161
             ||||||||||||||||||||
Sbjct: 70766 aggaaaaataatattacaat 70785
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>ref|XM_651128.1| Entamoeba histolytica HM-1:IMSS ubiquitin carboxyl-terminal hydrolase
            (16.t00053) partial mRNA
          Length = 5580

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  gtagatttttcattattttt 418
            ||||||||||||||||||||
Sbjct: 1354 gtagatttttcattattttt 1335
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>gb|BC013670.1| Mus musculus oxoglutarate dehydrogenase (lipoamide), mRNA (cDNA
           clone MGC:19042 IMAGE:4188988), complete cds
          Length = 4035

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 54  gtcctgaagccttccacaagtacc 31
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>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence
          Length = 136723

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gcactgcaagatcaataaat 130
             ||||||||||||||||||||
Sbjct: 53040 gcactgcaagatcaataaat 53021
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>gb|AF045646.3| Caenorhabditis elegans cosmid F56B3, complete sequence
          Length = 39874

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   agatttttcattatttttct 420
             ||||||||||||||||||||
Sbjct: 36239 agatttttcattatttttct 36258
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>emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on chromosome 1 Contains
            the 3' end of the gene for RNA processing factor 1
            (RPF1), the GNG5 gene for guanine nucleotide binding
            protein (G protein), gamma 5, the SPATA1 gene for
            spermatogenesis associated 1, the CTBS gene for
            chitobiase, di-N-acetyl- and a CpG island, complete
            sequence
          Length = 125565

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  atttttcattatttttctag 422
            ||||||||||||||||||||
Sbjct: 6107 atttttcattatttttctag 6126
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>emb|AL096707.13|HSJ729N16 Human DNA sequence from clone RP4-729N16 on chromosome 10, complete
             sequence
          Length = 154469

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    gaagtagacaaaaacaagta 50
             ||||||||||||||||||||
Sbjct: 82478 gaagtagacaaaaacaagta 82459
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>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete
              sequence
          Length = 232408

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 426    gtcctgaagcgttccacaagtacc 449
              |||||||||| |||||||||||||
Sbjct: 104189 gtcctgaagccttccacaagtacc 104166
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>emb|AL035076.1|SPCC417 S.pombe chromosome III cosmid c417
          Length = 40383

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   acatatctcaagttgatgag 328
             ||||||||||||||||||||
Sbjct: 15747 acatatctcaagttgatgag 15728
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>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence
          Length = 211004

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aagtagacaaaaacaagtat 51
             ||||||||||||||||||||
Sbjct: 82343 aagtagacaaaaacaagtat 82362
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>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    tttcattatttttctagttg 425
              ||||||||||||||||||||
Sbjct: 178905 tttcattatttttctagttg 178924
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>gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, complete sequence
          Length = 130735

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   gaaggtagatttttcattattttt 418
             ||||||||||||| ||||||||||
Sbjct: 41590 gaaggtagattttgcattattttt 41567
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>dbj|AK220536.1| Mus musculus mRNA for mKIAA4192 protein
          Length = 4089

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 82  gtcctgaagccttccacaagtacc 59
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>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atcctaaccccatggtgatg 294
              ||||||||||||||||||||
Sbjct: 140259 atcctaaccccatggtgatg 140278
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>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 583  gtcctcatcaatctgctctt 602
            ||||||||||||||||||||
Sbjct: 1264 gtcctcatcaatctgctctt 1245
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>gb|AC104442.2| Homo sapiens chromosome 3 clone RP11-905F6, complete sequence
          Length = 219227

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  tttcctctgaaggtagattt 406
            ||||||||||||||||||||
Sbjct: 4734 tttcctctgaaggtagattt 4715
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>gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, complete sequence
          Length = 183772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   tttcattatttttctagttg 425
             ||||||||||||||||||||
Sbjct: 87166 tttcattatttttctagttg 87185
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>ref|NM_010956.2| Mus musculus oxoglutarate dehydrogenase (lipoamide) (Ogdh), mRNA
          Length = 6638

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>dbj|AK147289.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1007N08 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 6638

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 121 gtcctgaagccttccacaagtacc 98
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>dbj|AK150009.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530117I02 product:oxoglutarate
           dehydrogenase (lipoamide), full insert sequence
          Length = 4127

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 86  gtcctgaagccttccacaagtacc 63
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>gb|AC013603.17| Homo sapiens, clone RP11-10D7, complete sequence
          Length = 177839

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   ggaaaaataatattacaata 162
             ||||||||||||||||||||
Sbjct: 16833 ggaaaaataatattacaata 16852
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>emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, complete sequence
          Length = 173227

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aagtagacaaaaacaagtat 51
             ||||||||||||||||||||
Sbjct: 41709 aagtagacaaaaacaagtat 41690
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>dbj|AK169286.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:I920176A16 product:oxoglutarate dehydrogenase
           (lipoamide), full insert sequence
          Length = 4155

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 112 gtcctgaagccttccacaagtacc 89
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>dbj|AK088582.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430020N12
           product:oxoglutarate dehydrogenase (lipoamide) (EC
           1.2.4.2) E1 component (fragment) homolog [Mus musculus],
           full insert sequence
          Length = 3554

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 48  gtcctgaagccttccacaagtacc 25
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>gb|AC003111.1|AC003111 Human DNA from chromosome 19-specific cosmid R28194, genomic sequence,
             complete sequence
          Length = 40649

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    caagtatacacctagaacac 64
             ||||||||||||||||||||
Sbjct: 21033 caagtatacacctagaacac 21014
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>dbj|AK008811.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched
           library, clone:2210403E04 product:unclassifiable, full
           insert sequence
          Length = 779

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 76  gtcctgaagccttccacaagtacc 53
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>ref|NM_067479.3| Caenorhabditis elegans R02D3.3 (R02D3.3) mRNA, complete cds
          Length = 1628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  ttcgaatgagcttttcctctgaag 398
            ||||| ||||||||||||||||||
Sbjct: 1463 ttcgattgagcttttcctctgaag 1440
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>dbj|AP000030.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 1/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   atcctaaccccatggtgatg 294
             ||||||||||||||||||||
Sbjct: 84357 atcctaaccccatggtgatg 84376
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>gb|AC138058.2| Homo sapiens chromosome 3 clone RP11-298C2, complete sequence
          Length = 154123

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tttcctctgaaggtagattt 406
             ||||||||||||||||||||
Sbjct: 79348 tttcctctgaaggtagattt 79329
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>gb|AC155998.2| Xenopus tropicalis clone ISB1-313L20, complete sequence
          Length = 86223

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tttttcattatttttctagt 423
             ||||||||||||||||||||
Sbjct: 79753 tttttcattatttttctagt 79734
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>dbj|AK201619.1| Mus musculus cDNA, clone:Y1G0138N03, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000064907, based on BLAT search
          Length = 172

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 426 gtcctgaagcgttccacaagtacc 449
           |||||||||| |||||||||||||
Sbjct: 70  gtcctgaagccttccacaagtacc 47
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>emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in linkage group 22,
             complete sequence
          Length = 106459

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aagtagacaaaaacaagtat 51
             ||||||||||||||||||||
Sbjct: 65748 aagtagacaaaaacaagtat 65767
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>emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in linkage group 22,
             complete sequence
          Length = 234949

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   agatcaataaatcaaccgtataca 142
             ||||||||||||||||| ||||||
Sbjct: 65712 agatcaataaatcaaccatataca 65735
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>emb|CR456625.13| Zebrafish DNA sequence from clone DKEY-76G24 in linkage group 12,
              complete sequence
          Length = 228447

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    tataatgctgtcaattattc 536
              ||||||||||||||||||||
Sbjct: 121266 tataatgctgtcaattattc 121285
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>emb|AL163051.5|CNS01RIA Human chromosome 14 DNA sequence BAC R-872J21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188020

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   agatttttcattatttttctagtt 424
             ||||||| ||||||||||||||||
Sbjct: 96509 agattttacattatttttctagtt 96532
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    atcctaaccccatggtgatg 294
              ||||||||||||||||||||
Sbjct: 231363 atcctaaccccatggtgatg 231382
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>gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 map 4q25, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 138    atacaggaaaaataatattacaat 161
              |||||| |||||||||||||||||
Sbjct: 135824 atacagtaaaaataatattacaat 135847
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>emb|Z11126.1|CEZK643 Caenorhabditis elegans Cosmid ZK643, complete sequence
          Length = 39534

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   tttttcattatttttctagt 423
             ||||||||||||||||||||
Sbjct: 15270 tttttcattatttttctagt 15289
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>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
              sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 406    tttcattatttttctagttg 425
              ||||||||||||||||||||
Sbjct: 127922 tttcattatttttctagttg 127903
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>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete
             sequence
          Length = 230614

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   atacaggaaaaataatatta 157
             ||||||||||||||||||||
Sbjct: 77737 atacaggaaaaataatatta 77718
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>gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, complete sequence
          Length = 185872

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  ggaaaaataatattacaata 162
            ||||||||||||||||||||
Sbjct: 6533 ggaaaaataatattacaata 6514
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>dbj|AP000252.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:T650, complete sequence
          Length = 67008

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  atcctaaccccatggtgatg 294
            ||||||||||||||||||||
Sbjct: 7200 atcctaaccccatggtgatg 7219
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>dbj|AP000212.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 10/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   atcctaaccccatggtgatg 294
             ||||||||||||||||||||
Sbjct: 44351 atcctaaccccatggtgatg 44370


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,912,669
Number of Sequences: 3902068
Number of extensions: 5912669
Number of successful extensions: 347544
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 347171
Number of HSP's gapped (non-prelim): 366
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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