ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 513 e-142
2dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mR... 513 e-142
3ref|NM_191042.1| Oryza sativa (japonica cultivar-group), predic... 509 e-141
4ref|XM_475461.1| Oryza sativa (japonica cultivar-group), predic... 507 e-140
5dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135
6gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence 353 5e-94
7gb|AY109645.1| Zea mays CL4356_2 mRNA sequence 351 2e-93
8gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence 204 3e-49
9gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 153 9e-34
10gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03... 153 9e-34
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
13dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
14dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
15ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ pepti... 133 9e-28
16emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome s... 133 9e-28
17gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp... 133 9e-28
18gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp... 133 9e-28
19gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subun... 133 9e-28
20emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Co... 125 2e-25
21gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete se... 125 2e-25
22dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha su... 111 3e-21
23gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence 90 1e-14
24gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map... 82 3e-12
25emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alp... 58 4e-05
26dbj|AB210519.1| Ciona intestinalis mRNA for Janus kinase, comple... 44 0.61
27gb|AC154801.2| Mus musculus BAC clone RP24-500P8 from chromosome... 44 0.61
28gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromos... 44 0.61
29gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 44 0.61
30gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
31gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete s... 42 2.4
32gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s... 42 2.4
33gb|AF055983.1| Mus musculus proteasome alpha7/C8 subunit mRNA, c... 42 2.4
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
36gb|BC091743.1| Mus musculus proteasome (prosome, macropain) subu... 42 2.4
37dbj|AK104583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
38dbj|AK101778.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
39dbj|AK060359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
40dbj|AK059980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
41gb|AF060089.1|AF060089 Mus musculus proteasome subunit C8 (Psma3... 42 2.4
42emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chr... 42 2.4
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
45emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126... 42 2.4
46gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complet... 42 2.4
47emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chro... 42 2.4
48gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, co... 40 9.5
49gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 9.5
50gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, comp... 40 9.5
51gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:1140... 40 9.5
52gb|AY619371.1| Daphnia pulicaria clone WFms0000362 microsatellit... 40 9.5
53ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA 40 9.5
54ref|XM_753392.1| Ustilago maydis 521 hypothetical protein (UM023... 40 9.5
55gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complet... 40 9.5
56gb|BC041518.1| Xenopus laevis proteasome (prosome, macropain) su... 40 9.5
57gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete... 40 9.5
58gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 40 9.5
59emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chrom... 40 9.5
60emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro... 40 9.5
61emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chr... 40 9.5
62emb|AJ719536.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.5
63gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, com... 40 9.5
64gb|AC079460.19| Homo sapiens 12 BAC RP11-297L6 (Roswell Park Can... 40 9.5
65gb|AC113429.2| Homo sapiens chromosome 5 clone RP11-775H7, compl... 40 9.5
66gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, com... 40 9.5
67gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosom... 40 9.5
68dbj|AK084370.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 9.5
69gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 9.5
70dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.5
71gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, comple... 40 9.5
72gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4 40 9.5
73gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 9.5
74emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 m... 40 9.5
75dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P... 40 9.5
76gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 9.5
77emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on ch... 40 9.5
78emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chr... 40 9.5
79gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region 40 9.5 
>dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132C12, full
            insert sequence
          Length = 1188

 Score =  513 bits (259), Expect = e-142
 Identities = 430/487 (88%)
 Strand = Plus / Minus

                                                                        
Query: 209  tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
            |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 1011 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 952

                                                                        
Query: 269  ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 328
            ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 951  ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 892

                                                                        
Query: 329  gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 388
             ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 891  attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 832

                                                                        
Query: 389  cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 448
            |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 831  cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 772

                                                                        
Query: 449  ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 508
            ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 771  ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 712

                                                                        
Query: 509  gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 568
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 711  gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacaac 652

                                                                        
Query: 569  caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 628
            ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 651  caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 592

                                                                        
Query: 629  ctaattccttcacaggcatgggttctccgtataccttctcataattggctgcttctgact 688
            | ||||| || ||||  |||||||| || || |||||||||||| |||| ||||| || |
Sbjct: 591  ccaattcttttacagaaatgggttcaccatagaccttctcataactggccgcttccgatt 532

                   
Query: 689  ttgctct 695
            |||||||
Sbjct: 531  ttgctct 525
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>dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mRNA for alpha 7
           subunit of 20S proteasome, complete cds
          Length = 1091

 Score =  513 bits (259), Expect = e-142
 Identities = 430/487 (88%)
 Strand = Plus / Minus

                                                                       
Query: 209 tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
           |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 907 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 848

                                                                       
Query: 269 ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 328
           ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 847 ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 788

                                                                       
Query: 329 gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 388
            ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 787 attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 728

                                                                       
Query: 389 cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 448
           |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 727 cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 668

                                                                       
Query: 449 ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 508
           ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 667 ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 608

                                                                       
Query: 509 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 568
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 607 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacaac 548

                                                                       
Query: 569 caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 628
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 547 caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 488

                                                                       
Query: 629 ctaattccttcacaggcatgggttctccgtataccttctcataattggctgcttctgact 688
           | ||||| || ||||  |||||||| || || |||||||||||| |||| ||||| || |
Sbjct: 487 ccaattcttttacagaaatgggttcaccatagaccttctcataactggccgcttccgatt 428

                  
Query: 689 ttgctct 695
           |||||||
Sbjct: 427 ttgctct 421
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>ref|NM_191042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  509 bits (257), Expect = e-141
 Identities = 419/473 (88%)
 Strand = Plus / Minus

                                                                       
Query: 223 gcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccagaagatcattt 282
           ||||||||||| || | ||||||||| |||||  ||||||||||||||| |||||||   
Sbjct: 743 gcatccatctcctcaagcgctgcctgagctgcaaccttggcctgctccaaaagatcagca 684

                                                                       
Query: 283 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 342
           |||||||||| |||||| || || |||||||| || | |||||||| ||||| |||||||
Sbjct: 683 ggaaccttctgatgctggcgatttgattcatcacatatccagcttaattccaactcaaaa 624

                                                                       
Query: 343 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 402
           | |||||| || |||||||| ||||  |||||||| ||||| |||||||| |||||||||
Sbjct: 623 gctttgtccttagcttcatcatgtactccataaatgatctttgcaacctccacaatgcct 564

                                                                       
Query: 403 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 462
           |||| |||||| ||||| ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 563 tcccggcaggtaagctcggaaagcttcaacttctctatttcagtttttgcagcctgtctt 504

                                                                       
Query: 463 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 522
           ||||||||||||||||||||||| ||||| |||||||  ||||| |||||||||||||||
Sbjct: 503 cctttacccagagcagcaccaaagtatttgtatgagactcctgagggttcgatcatgtag 444

                                                                       
Query: 523 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 582
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 agctgtggcccatccctatcataacctccaagaataactccacaaccaaaaggcctgagc 384

                                                                       
Query: 583 caccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattccttcaca 642
           ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| || |||
Sbjct: 383 caccagtagagtgtacaaagatgaacgtagctagccacacgatcagccaattcttttaca 324

                                                                
Query: 643 ggcatgggttctccgtataccttctcataattggctgcttctgactttgctct 695
           |  |||||||| || || |||||||||||| |||| ||||| || ||||||||
Sbjct: 323 gaaatgggttcaccatagaccttctcataactggccgcttccgattttgctct 271
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>ref|XM_475461.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  507 bits (256), Expect = e-140
 Identities = 421/476 (88%)
 Strand = Plus / Minus

                                                                       
Query: 217 tagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccagaaga 276
           ||||| || |||||||| || | ||||||||| || |||||||| ||||||||||  || 
Sbjct: 749 tagtctgcgtccatctcctcgagcgctgcctgggcggctgccttcgcctgctccacgagg 690

                                                                       
Query: 277 tcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagc 336
           || | |||||||||||||||||| || || ||||||||||| |||||||| || ||||| 
Sbjct: 689 tcgtctggaaccttctcatgctggcgctttgattcatcgcatacccagctcagctccagt 630

                                                                       
Query: 337 tcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaaca 396
           |||||   ||||||||| ||||| || || |  ||||| |||||||| ||||||||||||
Sbjct: 629 tcaaagtctttgtctttagcttcgtcatgcactccatagattatctttgcaacctcaaca 570

                                                                       
Query: 397 atgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcc 456
           |||||||| ||||| || ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 569 atgccttctctgcatgtaagctcagaaagattcagtttctctatctccgtttttgcagcc 510

                                                                       
Query: 457 tgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatc 516
           ||||||||||| ||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 509 tgtcttcctttccccagggcagcaccgaagtatttataggagagccccgaaggttcgatc 450

                                                                       
Query: 517 atgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaaaggc 576
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atgtagagttgtggcccatccctatcataacctccaagaataactccacagccaaaaggc 390

                                                                       
Query: 577 ctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattcc 636
           ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| ||||||
Sbjct: 389 ctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagccaattcc 330

                                                                   
Query: 637 ttcacaggcatgggttctccgtataccttctcataattggctgcttctgactttgc 692
           || ||||||||||||||||| || ||||| |||||| ||||||| |||||||||||
Sbjct: 329 tttacaggcatgggttctccatacaccttttcataactggctgcctctgactttgc 274
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>dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E06, full
           insert sequence
          Length = 1120

 Score =  490 bits (247), Expect = e-135
 Identities = 428/487 (87%), Gaps = 1/487 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
           |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 943 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 884

                                                                       
Query: 269 ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 328
           ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 883 ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 824

                                                                       
Query: 329 gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 388
            ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 823 attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 764

                                                                       
Query: 389 cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 448
           |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 763 cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 704

                                                                       
Query: 449 ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 508
           ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 703 ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 644

                                                                       
Query: 509 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 568
           ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 643 gttcgatcat-aagagctgtggcccatccctatcataacctccaagaataactccacaac 585

                                                                       
Query: 569 caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 628
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 584 caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 525

                                                                       
Query: 629 ctaattccttcacaggcatgggttctccgtataccttctcataattggctgcttctgact 688
           | ||||| || ||||  |||||||| || || |||||||||||| |||| ||||| || |
Sbjct: 524 ccaattcttttacagaaatgggttcaccatagaccttctcataactggccgcttccgatt 465

                  
Query: 689 ttgctct 695
           |||||||
Sbjct: 464 ttgctct 458
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>gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence
          Length = 1266

 Score =  353 bits (178), Expect = 5e-94
 Identities = 400/474 (84%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 272
           ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 939 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 880

                                                                       
Query: 273 aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 332
            || ||||||||| |||||| |||||||||||| |||||||| || | |||||| |  ||
Sbjct: 879 cagttcatttggacccttctgatgctgacggttcgattcatcacagatccagctcaactc 820

                                                                       
Query: 333 cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 392
           || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 819 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 760

                                                                       
Query: 393 aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgc 452
           |||||||||||||| |||||| ||||| ||||| ||||| || |||||||| || |||||
Sbjct: 759 aacaatgccttcccggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 700

                                                                       
Query: 453 agcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttc 512
           ||||||||| || || ||||  |||||||| || ||||| || || |  ||||| |||||
Sbjct: 699 agcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgagggttc 640

                                                                       
Query: 513 gatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaa 572
            |||||||||||||||||||||||||||||||||||||| |||||||| || || |||||
Sbjct: 639 tatcatgtagagctgtggcccatccctatcataacctcctagaataacaccgcaaccaaa 580

                                                                       
Query: 573 aggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaa 632
           |||||||||||||||||| || || || |||||||| || || || ||||||||||| ||
Sbjct: 579 aggcctgagccaccagtacagcgtgcaaagatgaacataacttgccacacgatcagccaa 520

                                                                 
Query: 633 ttccttcacaggcatgggttctccgtataccttctcataattggctgcttctga 686
           |||||||||||  ||||||||||| || ||||| |||||| |||| ||||||||
Sbjct: 519 ttccttcacagaaatgggttctccataaaccttttcataactggcagcttctga 466
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>gb|AY109645.1| Zea mays CL4356_2 mRNA sequence
          Length = 1252

 Score =  351 bits (177), Expect = 2e-93
 Identities = 402/477 (84%)
 Strand = Plus / Plus

                                                                       
Query: 213 ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 272
           ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 284 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 343

                                                                       
Query: 273 aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 332
            || |||||||||||||||| |||||| ||||| |||||||| || | |||||| |  ||
Sbjct: 344 cagttcatttggaaccttctgatgctggcggttcgattcatcacagatccagctcaactc 403

                                                                       
Query: 333 cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 392
           || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 404 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 463

                                                                       
Query: 393 aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgc 452
           |||||||||||| | |||||| ||||| ||||| ||||| || |||||||| || |||||
Sbjct: 464 aacaatgccttctcggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 523

                                                                       
Query: 453 agcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttc 512
           |||||| ||||| || ||||  |||||||| || |||||||| || |  ||||| || ||
Sbjct: 524 agcctgccttcccttccccaatgcagcaccgaagtatttataggaaactcctgagggctc 583

                                                                       
Query: 513 gatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaa 572
            |||||||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 584 tatcatgtaaagctgtggcccatccctatcataacctccaagaataacaccgcaaccaaa 643

                                                                       
Query: 573 aggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaa 632
           ||| |||||||||||||| || || || |||||||| || || ||||||||||| || ||
Sbjct: 644 aggtctgagccaccagtacagcgtgcaaagatgaacataacttgctacacgatctgccaa 703

                                                                    
Query: 633 ttccttcacaggcatgggttctccgtataccttctcataattggctgcttctgactt 689
           |||||||||||| ||||||||||| || ||||| |||||| |||| |||||||||||
Sbjct: 704 ttccttcacaggaatgggttctccatagaccttttcataactggcagcttctgactt 760
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>gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence
          Length = 1256

 Score =  204 bits (103), Expect = 3e-49
 Identities = 205/239 (85%)
 Strand = Plus / Minus

                                                                       
Query: 448 tttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaa 507
           |||||||||||||| || || ||||  |||||||| || ||||| || || |  ||||| 
Sbjct: 698 tttgcagcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgag 639

                                                                       
Query: 508 ggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacag 567
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||| || || 
Sbjct: 638 ggttctatcatgtagagctgtggcccatccctatcataacctcctagaataacaccgcaa 579

                                                                       
Query: 568 ccaaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatca 627
           ||||||||||||||||||||||| || || || |||||||| || || || |||||||||
Sbjct: 578 ccaaaaggcctgagccaccagtacagcgtgcaaagatgaacataacttgccacacgatca 519

                                                                      
Query: 628 gctaattccttcacaggcatgggttctccgtataccttctcataattggctgcttctga 686
           || |||||||||||||  ||||||||||| || ||||| |||||| |||| ||||||||
Sbjct: 518 gccaattccttcacagaaatgggttctccataaaccttttcataactggcagcttctga 460



 Score =  165 bits (83), Expect = 2e-37
 Identities = 194/231 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 272
            ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 1003 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 944

                                                                        
Query: 273  aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 332
             || |||||||||||||||| |||||||||||| |||||||| || | |||||| |  ||
Sbjct: 943  cagttcatttggaaccttctgatgctgacggttcgattcatcacagatccagctcaactc 884

                                                                        
Query: 333  cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 392
            || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 883  caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 824

                                                               
Query: 393  aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctc 443
            |||||||||||||| |||||| ||||| ||||| ||||| || ||||||||
Sbjct: 823  aacaatgccttcccggcaggtaagctccgaaagtttcaacttttctatctc 773
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                         
Query: 496   gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 555
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 47901 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 47960

                                      
Query: 556   ataactccacagccaaaaggcctga 580
             |||||||||||||||||||||||||
Sbjct: 47961 ataactccacagccaaaaggcctga 47985



 Score =  105 bits (53), Expect = 2e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                         
Query: 576   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
             |||||||||||||||||| ||||| | ||| || |||||||||||||||||||| |||||
Sbjct: 48058 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagccaattc 48117

                                  
Query: 636   cttcacaggcatgggttctcc 656
             ||| |||||||||||||||||
Sbjct: 48118 ctttacaggcatgggttctcc 48138



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 379   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
             ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 46785 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 46844

                   
Query: 439   atctcc 444
             ||||||
Sbjct: 46845 atctcc 46850



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 444   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
             |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 47618 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 47665



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 286   accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 345
             |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 46196 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 46255

                           
Query: 346   ttgtcttttgcttc 359
             |||||||| |||||
Sbjct: 46256 ttgtctttagcttc 46269
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>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
             region
          Length = 58956

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Minus

                                                                         
Query: 496   gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 555
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32993 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 32934

                                      
Query: 556   ataactccacagccaaaaggcctga 580
             |||||||||||||||||||||||||
Sbjct: 32933 ataactccacagccaaaaggcctga 32909



 Score =  105 bits (53), Expect = 2e-19
 Identities = 74/81 (91%)
 Strand = Plus / Minus

                                                                         
Query: 576   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
             |||||||||||||||||| ||||| | ||| || |||||||||||||||||||| |||||
Sbjct: 32836 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagccaattc 32777

                                  
Query: 636   cttcacaggcatgggttctcc 656
             ||| |||||||||||||||||
Sbjct: 32776 ctttacaggcatgggttctcc 32756



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                         
Query: 379   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
             ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 34111 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 34052

                   
Query: 439   atctcc 444
             ||||||
Sbjct: 34051 atctcc 34046



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 444   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
             |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 33278 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 33231



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 286   accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 345
             |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 34700 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 34641

                           
Query: 346   ttgtcttttgcttc 359
             |||||||| |||||
Sbjct: 34640 ttgtctttagcttc 34627
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                            
Query: 496      gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 555
                |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 23979412 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 23979471

                                         
Query: 556      ataactccacagccaaaaggcctga 580
                |||||||||||||||||||||||||
Sbjct: 23979472 ataactccacagccaaaaggcctga 23979496



 Score =  105 bits (53), Expect = 2e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                            
Query: 576      cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
                |||||||||||||||||| ||||| | ||| || |||||||||||||||||||| |||||
Sbjct: 23979569 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagccaattc 23979628

                                     
Query: 636      cttcacaggcatgggttctcc 656
                ||| |||||||||||||||||
Sbjct: 23979629 ctttacaggcatgggttctcc 23979649



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 379      atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
                ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 23978296 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 23978355

                      
Query: 439      atctcc 444
                ||||||
Sbjct: 23978356 atctcc 23978361



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 444      cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
                |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 23979129 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 23979176



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 286      accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 345
                |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 23977707 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 23977766

                              
Query: 346      ttgtcttttgcttc 359
                |||||||| |||||
Sbjct: 23977767 ttgtctttagcttc 23977780
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 9e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                            
Query: 493      tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 552
                |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34466005 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 34465946

                                            
Query: 553      agaataactccacagccaaaaggcctga 580
                |||||||||||||| |||||||||||||
Sbjct: 34465945 agaataactccacaaccaaaaggcctga 34465918



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                            
Query: 576      cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
                |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 34465813 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagccaattc 34465754

                                  
Query: 636      cttcacaggcatgggttc 653
                 || ||||  ||||||||
Sbjct: 34465753 ttttacagaaatgggttc 34465736



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                                
Query: 444      cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
                |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 34466262 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 34466215



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 379      atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
                ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 34467113 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 34467054

                  
Query: 439      at 440
                ||
Sbjct: 34467053 at 34467052



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 209      tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
                |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 34468555 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 34468496

                           
Query: 269      ccagaagatca 279
                ||| |||||||
Sbjct: 34468495 ccaaaagatca 34468485
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score =  143 bits (72), Expect = 9e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                          
Query: 493    tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 552
              |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148349 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 148290

                                          
Query: 553    agaataactccacagccaaaaggcctga 580
              |||||||||||||| |||||||||||||
Sbjct: 148289 agaataactccacaaccaaaaggcctga 148262



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                          
Query: 576    cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
              |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 148157 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagccaattc 148098

                                
Query: 636    cttcacaggcatgggttc 653
               || ||||  ||||||||
Sbjct: 148097 ttttacagaaatgggttc 148080



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                              
Query: 444    cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
              |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 148606 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 148559



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 379    atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
              ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 149457 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 149398

                
Query: 439    at 440
              ||
Sbjct: 149397 at 149396



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 209    tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
              |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 150899 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 150840

                         
Query: 269    ccagaagatca 279
              ||| |||||||
Sbjct: 150839 ccaaaagatca 150829
to top
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score =  143 bits (72), Expect = 9e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                         
Query: 493   tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 552
             |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41724 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 41665

                                         
Query: 553   agaataactccacagccaaaaggcctga 580
             |||||||||||||| |||||||||||||
Sbjct: 41664 agaataactccacaaccaaaaggcctga 41637



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                         
Query: 576   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
             |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 41532 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagccaattc 41473

                               
Query: 636   cttcacaggcatgggttc 653
              || ||||  ||||||||
Sbjct: 41472 ttttacagaaatgggttc 41455



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                             
Query: 444   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 491
             |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 41981 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 41934



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 379   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 438
             ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 42832 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 42773

               
Query: 439   at 440
             ||
Sbjct: 42772 at 42771



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 209   tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 268
             |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 44274 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 44215

                        
Query: 269   ccagaagatca 279
             ||| |||||||
Sbjct: 44214 ccaaaagatca 44204
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>ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ peptidase/ threonine
           endopeptidase AT2G27020 (PAG1) mRNA, complete cds
          Length = 1024

 Score =  133 bits (67), Expect = 9e-28
 Identities = 178/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 654 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 595

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 594 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 535

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 534 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 475

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 474 taacttgcaacacgctcagaaagttccttcacagg 440
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>emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome subunit prc8
          Length = 958

 Score =  133 bits (67), Expect = 9e-28
 Identities = 178/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 459 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 400

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 399 taacttgcaacacgctcagaaagttccttcacagg 365
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>gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 750

 Score =  133 bits (67), Expect = 9e-28
 Identities = 178/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 536 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 477

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 476 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 417

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 416 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 357

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 356 taacttgcaacacgctcagaaagttccttcacagg 322
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>gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 935

 Score =  133 bits (67), Expect = 9e-28
 Identities = 178/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 569 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 510

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 509 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 450

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 449 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 390

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 389 taacttgcaacacgctcagaaagttccttcacagg 355
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>gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subunit PAG1 (PAG1) mRNA,
           complete cds
          Length = 958

 Score =  133 bits (67), Expect = 9e-28
 Identities = 178/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 459 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 400

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 399 taacttgcaacacgctcagaaagttccttcacagg 365
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>emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZH07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 837

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 467 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 408

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||| | |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 407 ctatatcatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 348

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||||||| || 
Sbjct: 347 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatgtaca 288

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 287 taacttgcaacacgctcagaaagttccttcacagg 253
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>gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete sequence
          Length = 1022

 Score =  125 bits (63), Expect = 2e-25
 Identities = 177/215 (82%)
 Strand = Plus / Minus

                                                                       
Query: 430 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 489
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 657 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 598

                                                                       
Query: 490 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 549
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 597 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 538

                                                                       
Query: 550 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacg 609
           ||||||||||| |||||||||||||||||||||||||| || || ||||||| ||| || 
Sbjct: 537 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacaaatgtaca 478

                                              
Query: 610 tagctagctacacgatcagctaattccttcacagg 644
           || || || ||||| ||||  | ||||||||||||
Sbjct: 477 taacttgcaacacgctcagaaagttccttcacagg 443
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>dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha subunit, complete
           cds
          Length = 1099

 Score =  111 bits (56), Expect = 3e-21
 Identities = 164/200 (82%)
 Strand = Plus / Minus

                                                                       
Query: 442 tccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagc 501
           |||||||| ||||||||| |||| || || | |||||| ||||||||| ||||||| |  
Sbjct: 566 tccgttttagcagcctgttttccctttccaatagcagcgccaaaatatctatatgaaatt 507

                                                                       
Query: 502 cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataact 561
           || ||||| || | ||| || | |||||| ||||| |  ||||||||||||||||| |||
Sbjct: 506 ccagaaggctcaaccatatataactgtggtccatctcggtcataacctccaagaatgact 447

                                                                       
Query: 562 ccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctaca 621
           ||||| |||||||| ||||||||||| ||||| || || | ||| || || ||||| |||
Sbjct: 446 ccacatccaaaaggtctgagccaccaatagagggtgcataaatggacataactagcaaca 387

                               
Query: 622 cgatcagctaattccttcac 641
           |||||||| | |||||||||
Sbjct: 386 cgatcagcaagttccttcac 367
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>gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence
          Length = 1134

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 240/305 (78%)
 Strand = Plus / Minus

                                                                       
Query: 283 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 342
           |||||||||| ||| || |||||||| ||||| || |||||||| | ||| || ||||| 
Sbjct: 787 ggaaccttctgatgttggcggttagactcatcacatacccagctcatttcaagttcaaat 728

                                                                       
Query: 343 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 402
           |  ||||||||||| ||||| ||||  || |||||||| || || ||||||| ||| |||
Sbjct: 727 gccttgtcttttgcctcatcatgtactccgtaaattatttttgctacctcaataatccct 668

                                                                       
Query: 403 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 462
           |  |  ||||| |  ||||| | ||| || ||||| || || ||||| ||||| || |||
Sbjct: 667 tgtcgacaggtcatttcagataactttaacttctcaatttctgttttagcagcttgcctt 608

                                                                       
Query: 463 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 522
           || || || | ||||||||| || ||  |||| ||||  || ||||| || | || ||| 
Sbjct: 607 ccctttccgatagcagcaccgaagtacctataggagacaccagaaggctcaaccaggtat 548

                                                                       
Query: 523 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 582
           || || || ||||| |||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 547 agttgaggtccatctctatcataccctccaagaatcaccccacatccaaaaggcctgagc 488

                
Query: 583 cacca 587
           |||||
Sbjct: 487 cacca 483
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>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
             sequence
          Length = 99345

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 502   cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataact 561
             ||||| ||||| |||||||| |  || || ||||| ||||||||||||||||||||||| 
Sbjct: 28939 cctgatggttcaatcatgtacaattgaggtccatctctatcataacctccaagaataacc 28998

                              
Query: 562   ccacagccaaaaggcct 578
             |||||||||||||||||
Sbjct: 28999 ccacagccaaaaggcct 29015



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                         
Query: 576   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagctaattc 635
             |||||||||||| || || ||||||||||| || || || || ||||| ||||  | |||
Sbjct: 29101 cctgagccaccaatacagggtacacagatgtacataacttgcaacacgctcagaaagttc 29160

                      
Query: 636   cttcacagg 644
             |||||||||
Sbjct: 29161 cttcacagg 29169
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>emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alpha7 proteasome subunit (a7
           gene)
          Length = 1047

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 263/341 (77%)
 Strand = Plus / Minus

                                                                       
Query: 283 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 342
           |||||||||| |||||| || ||||| ||||| |||||||| ||   |||||| ||||| 
Sbjct: 773 ggaaccttctgatgctgtcgattagactcatcacacacccaactcgtttccagttcaaac 714

                                                                       
Query: 343 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 402
           |  ||||| ||||| ||||| ||||  || || ||||| ||||| |||||||  |  |||
Sbjct: 713 gccttgtcctttgcctcatcatgtactccgtatattattttggctacctcaattacccct 654

                                                                       
Query: 403 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 462
           | ||  || || |  ||||| |||||||| || || || || || || ||||| ||||| 
Sbjct: 653 tgccgacacgtcatttcagagagcttcaacttttcaatttctgtcttagcagcttgtctg 594

                                                                       
Query: 463 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 522
           || || || | |||||||||||| ||  |||| ||||  || || || || | |||||| 
Sbjct: 593 cccttcccaatagcagcaccaaagtacctataggagacaccagacggctcaaccatgtat 534

                                                                       
Query: 523 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 582
           || || || ||||| |||||||| ||||| || || || ||||| || ||||||||||||
Sbjct: 533 agttgaggtccatctctatcatagcctccgaggatcaccccacatccgaaaggcctgagc 474

                                                    
Query: 583 caccagtagagtgtacacagatgaacgtagctagctacacg 623
           ||||| || ||||| || | |||||| || ||||| |||||
Sbjct: 473 caccaataaagtgtgcataaatgaacataactagcaacacg 433
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>dbj|AB210519.1| Ciona intestinalis mRNA for Janus kinase, complete cds, clone:
            cigd046k12
          Length = 4399

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 337  tcaaaagatttgtcttttgctt 358
            ||||||||||||||||||||||
Sbjct: 1565 tcaaaagatttgtcttttgctt 1544
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>gb|AC154801.2| Mus musculus BAC clone RP24-500P8 from chromosome 16, complete sequence
          Length = 157077

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 480   accaaaatatttatatgagagccctg 505
             ||||||||||| ||||||||||||||
Sbjct: 58767 accaaaatattcatatgagagccctg 58792
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>gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromosome unknown, complete
              sequence
          Length = 267345

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 188    aatgggaagcagagctcatcatctct 213
              ||||||||||||||||| ||||||||
Sbjct: 223793 aatgggaagcagagctcttcatctct 223768
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 251     ctgctgccttggcctgctccag 272
               ||||||||||||||||||||||
Sbjct: 1904782 ctgctgccttggcctgctccag 1904761
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>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0048P17, complete sequence
          Length = 149883

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   acgctgcctgtgctgctgcct 259
             |||||||||||||||||||||
Sbjct: 53850 acgctgcctgtgctgctgcct 53830
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>gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete sequence
          Length = 111889

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 417    ctcagaaagcttcaatttctc 437
              |||||||||||||||||||||
Sbjct: 108662 ctcagaaagcttcaatttctc 108642
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>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 417    ctcagaaagcttcaatttctc 437
              |||||||||||||||||||||
Sbjct: 102100 ctcagaaagcttcaatttctc 102120
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>gb|AF055983.1| Mus musculus proteasome alpha7/C8 subunit mRNA, complete cds
          Length = 938

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 319 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 367
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 692 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 644
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    acgctgcctgtgctgctgcct 259
              |||||||||||||||||||||
Sbjct: 944343 acgctgcctgtgctgctgcct 944323
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    acgctgcctgtgctgctgcct 259
              |||||||||||||||||||||
Sbjct: 886974 acgctgcctgtgctgctgcct 886954
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>gb|BC091743.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 3,
           mRNA (cDNA clone MGC:103159 IMAGE:5030475), complete cds
          Length = 909

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 319 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 367
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 664 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 616
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>dbj|AK104583.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F04, full
           insert sequence
          Length = 1091

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 acgctgcctgtgctgctgcct 259
           |||||||||||||||||||||
Sbjct: 201 acgctgcctgtgctgctgcct 221
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>dbj|AK101778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064O15, full
           insert sequence
          Length = 1201

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 acgctgcctgtgctgctgcct 259
           |||||||||||||||||||||
Sbjct: 301 acgctgcctgtgctgctgcct 321
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>dbj|AK060359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H05, full
           insert sequence
          Length = 1334

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 acgctgcctgtgctgctgcct 259
           |||||||||||||||||||||
Sbjct: 298 acgctgcctgtgctgctgcct 318
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>dbj|AK059980.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E05, full
           insert sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 acgctgcctgtgctgctgcct 259
           |||||||||||||||||||||
Sbjct: 204 acgctgcctgtgctgctgcct 224
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>gb|AF060089.1|AF060089 Mus musculus proteasome subunit C8 (Psma3) mRNA, complete cds
          Length = 860

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 319 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 367
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 660 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 612
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>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete
             sequence
          Length = 192196

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   ttttttgcactgaaaacgaac 148
             |||||||||||||||||||||
Sbjct: 49587 ttttttgcactgaaaacgaac 49567
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    acgctgcctgtgctgctgcct 259
              |||||||||||||||||||||
Sbjct: 886280 acgctgcctgtgctgctgcct 886260
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    acgctgcctgtgctgctgcct 259
              |||||||||||||||||||||
Sbjct: 944343 acgctgcctgtgctgctgcct 944323
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>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134217

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   acgctgcctgtgctgctgcct 259
             |||||||||||||||||||||
Sbjct: 81928 acgctgcctgtgctgctgcct 81908
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>gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complete sequence
          Length = 169272

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 256   gccttggcctgctccagaagatcat 280
             ||||||||||| |||||||||||||
Sbjct: 71028 gccttggcctgatccagaagatcat 71004
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>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete
              sequence
          Length = 232188

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      aagtttcagtttgtgaccaac 25
              |||||||||||||||||||||
Sbjct: 212579 aagtttcagtttgtgaccaac 212599
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>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence
          Length = 162813

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   acatggaagtaaatgggaag 196
             ||||||||||||||||||||
Sbjct: 21522 acatggaagtaaatgggaag 21541
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    aaagcttcaatttctctatc 441
              ||||||||||||||||||||
Sbjct: 517768 aaagcttcaatttctctatc 517787
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>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    gtatctgttacgccacacat 180
              ||||||||||||||||||||
Sbjct: 106298 gtatctgttacgccacacat 106279
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>gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:114044 IMAGE:7416126),
           complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 505 gaaggttcgatcatgtagagctgtggcccatc 536
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531
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>gb|AY619371.1| Daphnia pulicaria clone WFms0000362 microsatellite marker Dp349
           sequence
          Length = 226

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 aacgctgcctgtgctgctgc 257
           ||||||||||||||||||||
Sbjct: 163 aacgctgcctgtgctgctgc 182
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>ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 505 gaaggttcgatcatgtagagctgtggcccatc 536
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531
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>ref|XM_753392.1| Ustilago maydis 521 hypothetical protein (UM02338.1) partial mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 cctgtgctgctgccttggcc 264
           ||||||||||||||||||||
Sbjct: 250 cctgtgctgctgccttggcc 231
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>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence
          Length = 186160

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   tggcaacctcaacaatgcct 402
             ||||||||||||||||||||
Sbjct: 74826 tggcaacctcaacaatgcct 74807
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>gb|BC041518.1| Xenopus laevis proteasome (prosome, macropain) subunit, alpha type,
           3, mRNA (cDNA clone MGC:53724 IMAGE:4930219), complete
           cds
          Length = 974

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 319 acccagcttagttccagctcaaaagatttgtcttttgcttcatc 362
           ||||||||||||||||| ||||| || || |||||  |||||||
Sbjct: 714 acccagcttagttccagttcaaatgacttatctttcacttcatc 671
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>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence
          Length = 231302

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   atgggaagcagagctcatcatctc 212
             |||||||||||| |||||||||||
Sbjct: 66891 atgggaagcagacctcatcatctc 66868
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>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
              Sequence, complete sequence
          Length = 195048

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      ctaagtttcagtttgtgaccaaca 26
              |||| |||||||||||||||||||
Sbjct: 123871 ctaaatttcagtttgtgaccaaca 123848
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>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete
             sequence
          Length = 170807

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   gtttttgcagcctgtcttcc 464
             ||||||||||||||||||||
Sbjct: 50234 gtttttgcagcctgtcttcc 50253
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>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
              Rabep1 gene for rabaptin, RAB GTPase binding effector
              protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
              ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
              for nucleoporin 88, four novel genes, the C1qbp gene for
              complement component 1 q subcomponent binding protein, the
              Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a
               novel pseudogene, a CARD domain pseudogene and six CpG
              islands, complete sequence
          Length = 254116

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    gtttttgcagcctgtcttcc 464
              ||||||||||||||||||||
Sbjct: 162324 gtttttgcagcctgtcttcc 162343
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>emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chromosome 11, complete
              sequence
          Length = 238478

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    ctgtcttcctttacccagag 475
              ||||||||||||||||||||
Sbjct: 231576 ctgtcttcctttacccagag 231595
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>emb|AJ719536.1| Gallus gallus mRNA for hypothetical protein, clone 3c18
          Length = 1688

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 248  gtgctgctgccttggcctgctcca 271
            ||||||||||||||||| ||||||
Sbjct: 1075 gtgctgctgccttggccagctcca 1098
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>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    gcctgtcttcctttacccagagca 477
              ||||||||||||| ||||||||||
Sbjct: 136352 gcctgtcttccttcacccagagca 136375
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>gb|AC079460.19| Homo sapiens 12 BAC RP11-297L6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175994

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    caacaatgccttccctgcag 411
              ||||||||||||||||||||
Sbjct: 147594 caacaatgccttccctgcag 147613
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>gb|AC113429.2| Homo sapiens chromosome 5 clone RP11-775H7, complete sequence
          Length = 10528

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  aagtaaatgggaagcagagc 202
            ||||||||||||||||||||
Sbjct: 3908 aagtaaatgggaagcagagc 3927
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>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence
          Length = 205264

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    acatggaagtaaatgggaag 196
              ||||||||||||||||||||
Sbjct: 101589 acatggaagtaaatgggaag 101570
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>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete
           sequence
          Length = 229443

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 551 caagaataactccacagcca 570
           ||||||||||||||||||||
Sbjct: 872 caagaataactccacagcca 891
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>dbj|AK084370.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230033F14 product:unclassifiable, full
            insert sequence
          Length = 3251

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 383  tggcaacctcaacaatgcct 402
            ||||||||||||||||||||
Sbjct: 2798 tggcaacctcaacaatgcct 2779
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 568     ccaaaaggcctgagccacca 587
               ||||||||||||||||||||
Sbjct: 1965037 ccaaaaggcctgagccacca 1965056
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>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     cagtttgtgaccaacagcaa 30
              ||||||||||||||||||||
Sbjct: 239909 cagtttgtgaccaacagcaa 239928
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>gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, complete sequence
          Length = 201535

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    cacatggaagtaaatgggaa 195
              ||||||||||||||||||||
Sbjct: 189740 cacatggaagtaaatgggaa 189759
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>gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4
          Length = 145744

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   atccctatcataacctccaa 553
             ||||||||||||||||||||
Sbjct: 43074 atccctatcataacctccaa 43055
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     tgctgctgccttggcctgct 268
               ||||||||||||||||||||
Sbjct: 1594436 tgctgctgccttggcctgct 1594455
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>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete
              sequence
          Length = 241304

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     cagtttgtgaccaacagcaa 30
              ||||||||||||||||||||
Sbjct: 182678 cagtttgtgaccaacagcaa 182697
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>dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P178O22, ERG-ETS2 region,
              complete sequence
          Length = 141885

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     cagtttgtgaccaacagcaa 30
              ||||||||||||||||||||
Sbjct: 114323 cagtttgtgaccaacagcaa 114342
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      tttgtgaccaacagcaagca 33
               ||||||||||||||||||||
Sbjct: 1060563 tttgtgaccaacagcaagca 1060582
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>emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on chromosome 4 Contains part
              of the Astn2 gene for astrotactin 2 and a CpG island,
              complete sequence
          Length = 174567

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    atgggaagcagagctcatcatctc 212
              |||||||||||| |||||||||||
Sbjct: 105513 atgggaagcagacctcatcatctc 105490
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>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete
              sequence
          Length = 234878

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 551    caagaataactccacagcca 570
              ||||||||||||||||||||
Sbjct: 190668 caagaataactccacagcca 190687
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>gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region
          Length = 1925

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 ttccctgcaggttagctcag 421
           ||||||||||||||||||||
Sbjct: 268 ttccctgcaggttagctcag 249


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,824,877
Number of Sequences: 3902068
Number of extensions: 6824877
Number of successful extensions: 129208
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128672
Number of HSP's gapped (non-prelim): 528
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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