>ENV_HV1Z8 (P05882) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 863

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +3

Query: 336 PPLLGEPSVAVHATRCGEVEPHC----LINETCRSLTW-LDVIHSNHTI 467
           PP  G+P +  H+  CG    +C    L N T  S TW  D ++S  TI
Sbjct: 373 PPAGGDPEITTHSFNCGGEFFYCNTSRLFNSTWNSSTWNNDTLNSEGTI 421

>MURD_TROW8 (Q83HK0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 480

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 375 WHGRLRMALRAEEVHHVGTVGLCIYNV 295
           WHG   +  RA+   + GT G C+YN+
Sbjct: 209 WHGAKELYYRAKSRVYHGTTGFCVYNL 235

>HFS1_HUMAN (O75562) Protein HFSE-1|
          Length = 157

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +2

Query: 62  HNCISNAYAFQYATWIMERSFQNIDMYRE*LFTFYSFTNFESPWVSAPRVHANRACLRYF 241
           H  + N+Y +Q  +  M+       M R   F + S +   + W+++PRV +N+   R++
Sbjct: 18  HFRMVNSYDWQVVSGYMQEGSVPFHMARSIFFPYGSLSVHMALWMASPRVCSNQGSSRFY 77

>E2AK4_MOUSE (Q9QZ05) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
          Length = 1648

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 357 SVAVHATRCGEVEPHCLINETCRSLTWLDVIHSNHTIA*HAIL 485
           S+A H +  G V  H L   T + L  LD +HSN  +  H +L
Sbjct: 385 SLATHLSHSGPVPAHQLRKYTAQLLAGLDYLHSNSVV--HKVL 425

>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein)
          Length = 1649

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 357 SVAVHATRCGEVEPHCLINETCRSLTWLDVIHSNHTIA*HAIL 485
           S+A H +  G +  H L   T + L+ LD +HSN  +  H +L
Sbjct: 386 SLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNSVV--HKVL 426


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,158,868
Number of Sequences: 219361
Number of extensions: 1999143
Number of successful extensions: 5080
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5074
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)