Clone Name	rbasd19f23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ201158.1| Hordeum vulgare subsp. vulgare cultivar Morex phy...	807	0.0
2	gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ...	593	e-166
3	gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phy...	537	e-149
4	gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	537	e-149
5	emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytoc...	442	e-121
6	emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4)	325	1e-85
7	emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3)	317	3e-83
8	gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3)...	317	3e-83
9	emb|AJ313100.1|TAE313100 Triticum aestivum partial phya2 gene fo...	228	2e-56
10	gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome...	222	1e-54
11	gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque...	222	1e-54
12	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	222	1e-54
13	dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA...	222	1e-54
14	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	222	1e-54
15	emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome	222	1e-54
16	dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clon...	222	1e-54
17	gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, com...	157	6e-35
18	gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome...	157	6e-35
19	gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome...	157	6e-35
20	gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome...	157	6e-35
21	gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome ...	157	6e-35
22	gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome...	157	6e-35
23	gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome ...	157	6e-35
24	gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome ...	157	6e-35
25	gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome...	157	6e-35
26	gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome ...	157	6e-35
27	gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, comple...	157	6e-35
28	gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A...	157	6e-35
29	gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (P...	157	6e-35
30	gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (P...	157	6e-35
31	gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (P...	157	6e-35
32	gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (P...	157	6e-35
33	gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (P...	157	6e-35
34	gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence	157	6e-35
35	gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, ...	157	6e-35
36	gb|AY761820.1| Sorghum bicolor clone Rtx430 phytochrome A gene, ...	157	6e-35
37	gb|AY761810.1| Sorghum bicolor clone BTx623 phytochrome A gene, ...	157	6e-35
38	gb|AY761808.1| Sorghum bicolor clone 83707 phytochrome A gene, p...	157	6e-35
39	gb|AY761782.1| Sorghum bicolor clone 213900 phytochrome A gene, ...	157	6e-35
40	gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds	135	2e-28
41	gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (...	117	5e-23
42	gb|AY761819.1| Sorghum arundinaceum clone LWA88 phytochrome A ge...	103	8e-19
43	gb|AY761818.1| Sorghum x drummondii clone LWA71 phytochrome A ge...	103	8e-19
44	gb|AY761817.1| Sorghum arundinaceum clone LWA55 phytochrome A ge...	103	8e-19
45	gb|AY761816.1| Sorghum arundinaceum clone LWA42 phytochrome A ge...	103	8e-19
46	gb|AY761815.1| Sorghum arundinaceum clone LWA28 phytochrome A ge...	103	8e-19
47	gb|AY761814.1| Sorghum arundinaceum clone LWA22 phytochrome A ge...	103	8e-19
48	gb|AY761813.1| Sorghum arundinaceum clone LWA13 phytochrome A ge...	103	8e-19
49	gb|AY761812.1| Sorghum x drummondii clone LWA12b phytochrome A g...	103	8e-19
50	gb|AY761811.1| Sorghum x drummondii clone LWA12a phytochrome A g...	103	8e-19
51	gb|AY761809.1| Sorghum bicolor clone 87088 phytochrome A gene, p...	103	8e-19
52	gb|AY761807.1| Sorghum bicolor clone 77034b phytochrome A gene, ...	103	8e-19
53	gb|AY761806.1| Sorghum bicolor clone 77034a phytochrome A gene, ...	103	8e-19
54	gb|AY761805.1| Sorghum bicolor clone 55751b phytochrome A gene, ...	103	8e-19
55	gb|AY761804.1| Sorghum bicolor clone 55751a phytochrome A gene, ...	103	8e-19
56	gb|AY761803.1| Sorghum bicolor clone 51836 phytochrome A gene, p...	103	8e-19
57	gb|AY761802.1| Sorghum bicolor clone 51397b phytochrome A gene, ...	103	8e-19
58	gb|AY761801.1| Sorghum bicolor clone 51397a phytochrome A gene, ...	103	8e-19
59	gb|AY761800.1| Sorghum bicolor clone 51365b phytochrome A gene, ...	103	8e-19
60	gb|AY761799.1| Sorghum bicolor clone 51365a phytochrome A gene, ...	103	8e-19
61	gb|AY761798.1| Sorghum bicolor clone 510985 phytochrome A gene, ...	103	8e-19
62	gb|AY761797.1| Sorghum bicolor clone 510906b phytochrome A gene,...	103	8e-19
63	gb|AY761796.1| Sorghum bicolor clone 510906a phytochrome A gene,...	103	8e-19
64	gb|AY761795.1| Sorghum bicolor clone 51032 phytochrome A gene, p...	103	8e-19
65	gb|AY761794.1| Sorghum bicolor clone 50875 phytochrome A gene, p...	103	8e-19
66	gb|AY761793.1| Sorghum bicolor clone 50744 phytochrome A gene, p...	103	8e-19
67	gb|AY761792.1| Sorghum bicolor clone 287624b phytochrome A gene,...	103	8e-19
68	gb|AY761791.1| Sorghum bicolor clone 287624a phytochrome A gene,...	103	8e-19
69	gb|AY761790.1| Sorghum bicolor clone 267525 phytochrome A gene, ...	103	8e-19
70	gb|AY761789.1| Sorghum bicolor clone 267523 phytochrome A gene, ...	103	8e-19
71	gb|AY761788.1| Sorghum bicolor clone 257595 phytochrome A gene, ...	103	8e-19
72	gb|AY761787.1| Sorghum bicolor clone 221655 phytochrome A gene, ...	103	8e-19
73	gb|AY761786.1| Sorghum bicolor clone 221607b phytochrome A gene,...	103	8e-19
74	gb|AY761785.1| Sorghum bicolor clone 221607a phytochrome A gene,...	103	8e-19
75	gb|AY761784.1| Sorghum bicolor clone 221540 phytochrome A gene, ...	103	8e-19
76	gb|AY761783.1| Sorghum bicolor clone 22913 phytochrome A gene, p...	103	8e-19
77	gb|AY761781.1| Sorghum bicolor clone 152702 phytochrome A gene, ...	103	8e-19
78	gb|AY106693.1| Zea mays PCO126085 mRNA sequence	74	7e-10
79	gb|U60264.1|PAU60264 Picea abies phytochrome mRNA, complete cds	52	0.003
80	gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, c...	48	0.042
81	emb|AL391152.3|CNS06C7Y Human chromosome 14 DNA sequence BAC R-6...	46	0.17
82	ref|XM_592363.2| PREDICTED: Bos taurus similar to epidermal grow...	44	0.65
83	gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, comple...	44	0.65
84	gb|AC068863.6| Homo sapiens chromosome 2, clone CTD-2170C4, comp...	44	0.65
85	gb|AC079203.9| Homo sapiens chromosome 15, clone RP11-1084A12, c...	42	2.6
86	gb|AF314938.1|F314931S08 Homo sapiens potassium-chloride transpo...	42	2.6
87	gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosom...	42	2.6
88	gb|AF522187.1| Bacillus pumilus BpmI endonuclease-methyltransfer...	42	2.6
89	gb|AC108460.5| Homo sapiens chromosome 11, clone CTD-2302A16, co...	42	2.6
90	gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, comp...	42	2.6
91	gb|AC021822.21| Homo sapiens chromosome 15, clone RP11-122P18, c...	42	2.6
92	gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ...	42	2.6

---

>gb|DQ201158.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A mRNA,
            partial cds
          Length = 2485

 Score =  807 bits (407), Expect = 0.0
 Identities = 449/463 (96%), Gaps = 8/463 (1%)
 Strand = Plus / Minus

                                                                        
Query: 14   tttattnnagacttcttatgacca-gtttgcccaagtacatatcacagccataaaacact 72
            ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2441 tttattcaagacttcttatgaccaagtttgcccaagtacatatcacagccataaaacact 2382

                                                                        
Query: 73   tacgacgaagcatcaaacttgaaccttacacatacatattacatagtaggacggacgaga 132
            || |||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 2381 tatgacgaagcatcaaacttgaaccttacacatacata-------gtaggacggacgaga 2329

                                                                        
Query: 133  agaacacaacaacacatcacaagtacgtaaccaaaccgtgccacacaaccttcctttacc 192
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2328 agaacacaacaacacagcacaagtacgtaaccaaaccgtgccacacaaccttcctttacc 2269

                                                                        
Query: 193  ctagactgataactgatcctacaggccaacctttgcttcttcctttctgcattcacttaa 252
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2268 ctagactgataactgatcctacaggccaacctttgcttctttctttctgcattcacttaa 2209

                                                                        
Query: 253  cactctaccacagcctgctgcaaccgcgtcgcatcttccccgcaagtcatcaccgtcgtt 312
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2208 cactctaccacagcctgctgcaaccgcgccgcatcttccccgcaagtcatcaccgtcgtt 2149

                                                                        
Query: 313  cgctcatggttctttcgaaatgaagcatctgatgaccatgtgttgcacttgcttcttcat 372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 cgctcatggttctttcgaaatgaagcatctgatgaccatgtgttgcacttgcttcttcat 2089

                                                                        
Query: 373  cactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagattgacata 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 cactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagattgacata 2029

                                                       
Query: 433  ccggcttcccttaggtgacgaacatcgccgttcatgagcctca 475
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 ccggcttcccttaggtgacgaacatcgccgttcatgagcctca 1986



 Score =  537 bits (271), Expect = e-149
 Identities = 274/275 (99%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1496 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctggagtaaagcatgc 1437

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 1377

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 1317

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 1257

                                               
Query: 710  gaaggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||||||||||||||||||||||||||||||
Sbjct: 1256 gaaggcactcagtgtacttcccgcttcggtcgaag 1222

---

>gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A
            (PhyA) gene, complete cds
          Length = 6659

 Score =  593 bits (299), Expect = e-166
 Identities = 299/299 (100%)
 Strand = Plus / Minus

                                                                        
Query: 40   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6659 ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 6600

                                                                        
Query: 100  acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6599 acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 6540

                                                                        
Query: 160  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 220  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 280  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 338
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  545 bits (275), Expect = e-152
 Identities = 275/275 (100%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 4701

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 4641

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 4581

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 4521

                                               
Query: 710  gaaggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||||||||||||||||||||||||||||||
Sbjct: 4520 gaaggcactcagtgtacttcccgcttcggtcgaag 4486



 Score =  274 bits (138), Expect = 4e-70
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                        
Query: 338  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 398  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                              
Query: 458  cgccgttcatgagcctca 475
            ||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctca 5733

---

>gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  537 bits (271), Expect = e-149
 Identities = 274/275 (99%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4760 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctggagtaaagcatgc 4701

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 4641

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 4581

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 4521

                                               
Query: 710  gaaggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||||||||||||||||||||||||||||||
Sbjct: 4520 gaaggcactcagtgtacttcccgcttcggtcgaag 4486



 Score =  509 bits (257), Expect = e-141
 Identities = 288/299 (96%), Gaps = 7/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 40   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 99
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6652 ttgcccaagtacatatcacagccataaaacacttatgacgaagcatcaaacttgaacctt 6593

                                                                        
Query: 100  acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 159
            |||||||||||       ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6592 acacatacata-------gtaggacggacgagaagaacacaacaacacagcacaagtacg 6540

                                                                        
Query: 160  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 220  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 279
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttctttctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 280  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 338
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gccgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  274 bits (138), Expect = 4e-70
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                        
Query: 338  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 398  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                              
Query: 458  cgccgttcatgagcctca 475
            ||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctca 5733

---

>gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  537 bits (271), Expect = e-149
 Identities = 274/275 (99%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4760 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctggagtaaagcatgc 4701

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 4641

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 4581

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 4521

                                               
Query: 710  gaaggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||||||||||||||||||||||||||||||
Sbjct: 4520 gaaggcactcagtgtacttcccgcttcggtcgaag 4486



 Score =  509 bits (257), Expect = e-141
 Identities = 288/299 (96%), Gaps = 7/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 40   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 99
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6652 ttgcccaagtacatatcacagccataaaacacttatgacgaagcatcaaacttgaacctt 6593

                                                                        
Query: 100  acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 159
            |||||||||||       ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6592 acacatacata-------gtaggacggacgagaagaacacaacaacacagcacaagtacg 6540

                                                                        
Query: 160  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 220  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 279
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttctttctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 280  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 338
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gccgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  274 bits (138), Expect = 4e-70
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                        
Query: 338  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 398  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                              
Query: 458  cgccgttcatgagcctca 475
            ||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctca 5733

---

>emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytochrome A, exons 1-4
          Length = 6323

 Score =  442 bits (223), Expect = e-121
 Identities = 262/275 (95%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4915 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctggagtaaagcatgc 4856

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4855 ctgagagagggttgttgattgcatgtctcatgtaggagaaagctttcagcctttttagtg 4796

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
            ||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4795 acttctgctccgaggcttgctgcacctgcagtgcttgttgcagctcatgactaggaatat 4736

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||||||||||||||| ||||||||||||||| ||||||||  ||| ||||||||||| |
Sbjct: 4735 gaataaaacagaataccccagtgatgagaccaccctcattttgccttctgttcactgaca 4676

                                               
Query: 710  gaaggcactcagtgtacttcccgcttcggtcgaag 744
            |||| ||||||||||||||||||||||||||||||
Sbjct: 4675 gaagacactcagtgtacttcccgcttcggtcgaag 4641



 Score =  176 bits (89), Expect = 7e-41
 Identities = 113/121 (93%)
 Strand = Plus / Minus

                                                                        
Query: 355  ttgcacttgcttcttcatcactgcctcattgccgttggagcacaagcaagttcggcggtg 414
            ||||||| |||||||||||| |||  ||| ||||||||||||||||||||||||||||||
Sbjct: 6000 ttgcactggcttcttcatcagtgctccatggccgttggagcacaagcaagttcggcggtg 5941

                                                                        
Query: 415  aggatgaagattgacataccggcttcccttaggtgacgaacatcgccgttcatgagcctc 474
            |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 5940 aggatgaagattgacacaccagcttcccttaggtgacgaacatcgccattcatgagcctc 5881

             
Query: 475  a 475
            |
Sbjct: 5880 a 5880

---

>emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4)
          Length = 3705

 Score =  325 bits (164), Expect = 1e-85
 Identities = 245/272 (90%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||
Sbjct: 2851 tcatctgttcttcattcaaatctgtgttcttcaatgcttttctagagtagagcattcctg 2792

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            |||| || |||||||| ||||||||||||||||||||||| ||||||||| |||| ||||
Sbjct: 2791 agagggggttgttgatcgcatgtctcatgtaggagaaagccttcagcctttttagcgacg 2732

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
             |||||||||||| ||||||||||| ||||| ||||||||||||||||||| || |||||
Sbjct: 2731 tctgctccgaggcttgctgcacctgtagtgcatgttgcagctcatgactagcaacatgaa 2672

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            ||||||||||||||||||||||||||||| |||||||| |  | |||||  |||||||||
Sbjct: 2671 taaaacagaatactccagtgatgagaccaccctcattttcttttctgtttgctgatagaa 2612

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            | |||||| ||||||| || ||||||||||||
Sbjct: 2611 gacactcaatgtactttccacttcggtcgaag 2580



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 115/136 (84%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                        
Query: 340  tctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcacaa 399
            |||||||||||| ||||||||| ||||| ||||   || |  ||||| ||||||||  ||
Sbjct: 3476 tctgatgaccatatgttgcactggcttcatcat---tgtccgattgctgttggagccgaa 3420

                                                                        
Query: 400  gcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcg 459
            |||||||| ||||||||||||||| ||||||  || ||||||||||| || |||||||| 
Sbjct: 3419 gcaagttcagcggtgaggatgaaggttgacacgccagcttcccttagatgccgaacatcc 3360

                            
Query: 460  ccgttcatgagcctca 475
            || |||||||||||||
Sbjct: 3359 ccattcatgagcctca 3344

---

>emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3)
          Length = 3696

 Score =  317 bits (160), Expect = 3e-83
 Identities = 244/272 (89%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 2851 tcatctgttcttcattcaaatctgtgttcttcaatgcttttctagagtagagcatgcctg 2792

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            ||||||| |||||||| ||||||||||||||||||||||| || |||||| |||| ||||
Sbjct: 2791 agagagggttgttgatcgcatgtctcatgtaggagaaagccttgagcctttttagcgacg 2732

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
              ||||||||||| ||||||||||| ||||| ||||||||||||||||||| || |||||
Sbjct: 2731 tttgctccgaggcttgctgcacctgtagtgcatgttgcagctcatgactagcaacatgaa 2672

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            ||||||||||||||||||||||||||||| |||||||| |  | |||||  |||||||||
Sbjct: 2671 taaaacagaatactccagtgatgagaccaccctcattttcttttctgtttgctgatagaa 2612

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            | |||||| ||||||| || |||| |||||||
Sbjct: 2611 gacactcaatgtactttccacttctgtcgaag 2580



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                        
Query: 367  cttcatcactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagatt 426
            |||||||| || | |||||| ||||||||  |||||||||| ||||||| ||||||| ||
Sbjct: 3452 cttcatcattgtcccattgctgttggagcggaagcaagttcagcggtgatgatgaaggtt 3393

                                                             
Query: 427  gacataccggcttcccttaggtgacgaacatcgccgttcatgagcctca 475
            |||| ||| ||||||||||| || |||||||| || |||||||||||||
Sbjct: 3392 gacacaccagcttcccttagatgccgaacatcaccattcatgagcctca 3344

---

>gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3), complete cds
          Length = 6746

 Score =  317 bits (160), Expect = 3e-83
 Identities = 244/272 (89%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 5354 tcatctgttcttcattcaaatctgtgttcttcaatgcttttctagagtagagcatgcctg 5295

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            ||||||| |||||||| ||||||||||||||||||||||| || |||||| |||| ||||
Sbjct: 5294 agagagggttgttgatcgcatgtctcatgtaggagaaagccttgagcctttttagcgacg 5235

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
              ||||||||||| ||||||||||| ||||| ||||||||||||||||||| || |||||
Sbjct: 5234 tttgctccgaggcttgctgcacctgtagtgcatgttgcagctcatgactagcaacatgaa 5175

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            ||||||||||||||||||||||||||||| |||||||| |  | |||||  |||||||||
Sbjct: 5174 taaaacagaatactccagtgatgagaccaccctcattttcttttctgtttgctgatagaa 5115

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            | |||||| ||||||| || |||| |||||||
Sbjct: 5114 gacactcaatgtactttccacttctgtcgaag 5083



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 94/109 (86%)
 Strand = Plus / Minus

                                                                        
Query: 367  cttcatcactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagatt 426
            |||||||| || | |||||| ||||||||  |||||||||| ||||||| ||||||| ||
Sbjct: 6434 cttcatcattgtcccattgctgttggagcggaagcaagttcagcggtgatgatgaaggtt 6375

                                                             
Query: 427  gacataccggcttcccttaggtgacgaacatcgccgttcatgagcctca 475
            |||| ||| ||||||||||| || |||||||| || |||||||||||||
Sbjct: 6374 gacacaccagcttcccttagatgccgaacatcaccattcatgagcctca 6326

---

>emb|AJ313100.1|TAE313100 Triticum aestivum partial phya2 gene for phytochrome A, exons 1-2
          Length = 2645

 Score =  228 bits (115), Expect = 2e-56
 Identities = 136/143 (95%)
 Strand = Plus / Minus

                                                                        
Query: 602  aggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacaga 661
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 aggcttgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacaga 2584

                                                                        
Query: 662  atactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggcactcag 721
            |||| ||||||||||||||| |||||||| |||| ||||||||||| |||||||| ||||
Sbjct: 2583 ataccccagtgatgagaccaccctcattttcccttctgttcactgacagaaggcaatcag 2524

                                   
Query: 722  tgtacttcccgcttcggtcgaag 744
            |||||||||||||||||||||||
Sbjct: 2523 tgtacttcccgcttcggtcgaag 2501

---

>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
              OSJNBa0031O09, complete sequence
          Length = 161339

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Plus

                                                                          
Query: 473    tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
              ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 141898 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 141957

                                                                          
Query: 533    agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
              ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 141958 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 142017

                                                                          
Query: 593    cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
               |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 142018 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 142077

                                                                          
Query: 653    taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
              | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 142078 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 142137

                                              
Query: 713    ggcactcagtgtacttcccgcttcggtcgaag 744
              |||||||  | ||||||||| | |||||||||
Sbjct: 142138 ggcactcgatatacttcccgttccggtcgaag 142169



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                          
Query: 390    tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
              ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 140937 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 140996

                                        
Query: 450    acgaacatcgccgttcatgagcctca 475
               || |||||||| |||||||||||||
Sbjct: 140997 tcggacatcgccattcatgagcctca 141022

---

>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Plus

                                                                         
Query: 473   tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
             ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 59881 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 59940

                                                                         
Query: 533   agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
             ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 59941 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 60000

                                                                         
Query: 593   cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
              |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 60001 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 60060

                                                                         
Query: 653   taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
             | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 60061 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 60120

                                             
Query: 713   ggcactcagtgtacttcccgcttcggtcgaag 744
             |||||||  | ||||||||| | |||||||||
Sbjct: 60121 ggcactcgatatacttcccgttccggtcgaag 60152



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                         
Query: 390   tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
             ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 58920 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 58979

                                       
Query: 450   acgaacatcgccgttcatgagcctca 475
              || |||||||| |||||||||||||
Sbjct: 58980 tcggacatcgccattcatgagcctca 59005

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Plus

                                                                            
Query: 473      tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
                ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 28876586 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 28876645

                                                                            
Query: 533      agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
                ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 28876646 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 28876705

                                                                            
Query: 593      cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
                 |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 28876706 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 28876765

                                                                            
Query: 653      taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
                | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 28876766 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 28876825

                                                
Query: 713      ggcactcagtgtacttcccgcttcggtcgaag 744
                |||||||  | ||||||||| | |||||||||
Sbjct: 28876826 ggcactcgatatacttcccgttccggtcgaag 28876857



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                            
Query: 390      tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
                ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 28875625 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 28875684

                                          
Query: 450      acgaacatcgccgttcatgagcctca 475
                 || |||||||| |||||||||||||
Sbjct: 28875685 tcggacatcgccattcatgagcctca 28875710

---

>dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA for phytochrome A,
            complete cds
          Length = 3866

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 2944 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 2885

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 2884 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 2825

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
             |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 2824 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 2765

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 2764 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 2705

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||  | ||||||||| | |||||||||
Sbjct: 2704 ggcactcgatatacttcccgttccggtcgaag 2673



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 390  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 3522 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 3463

                                      
Query: 450  acgaacatcgccgttcatgagcctca 475
             || |||||||| |||||||||||||
Sbjct: 3462 tcggacatcgccattcatgagcctca 3437

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Plus

                                                                            
Query: 473      tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
                ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 28968008 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 28968067

                                                                            
Query: 533      agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
                ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 28968068 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 28968127

                                                                            
Query: 593      cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
                 |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 28968128 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 28968187

                                                                            
Query: 653      taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
                | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 28968188 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 28968247

                                                
Query: 713      ggcactcagtgtacttcccgcttcggtcgaag 744
                |||||||  | ||||||||| | |||||||||
Sbjct: 28968248 ggcactcgatatacttcccgttccggtcgaag 28968279



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                            
Query: 390      tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
                ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 28967047 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 28967106

                                          
Query: 450      acgaacatcgccgttcatgagcctca 475
                 || |||||||| |||||||||||||
Sbjct: 28967107 tcggacatcgccattcatgagcctca 28967132

---

>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome
          Length = 9979

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 7647 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 7588

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 7587 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 7528

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
             |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 7527 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 7468

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 7467 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 7408

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||  | ||||||||| | |||||||||
Sbjct: 7407 ggcactcgatatacttcccgttccggtcgaag 7376



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 390  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 8608 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 8549

                                      
Query: 450  acgaacatcgccgttcatgagcctca 475
             || |||||||| |||||||||||||
Sbjct: 8548 tcggacatcgccattcatgagcctca 8523

---

>dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125J06, full
            insert sequence
          Length = 3903

 Score =  222 bits (112), Expect = 1e-54
 Identities = 232/272 (85%)
 Strand = Plus / Minus

                                                                        
Query: 473  tcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgcctg 532
            ||||||| |||||||||| | |||||||||| |||||||| |||||||||||||| ||||
Sbjct: 2992 tcatctgctcttcattcagacctgtgttcttcagtgctttcctagagtaaagcatacctg 2933

                                                                        
Query: 533  agagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacg 592
            ||||||| ||||||||||||||||||||||||||| ||||||||| | || ||||||   
Sbjct: 2932 agagagggttgttgattgcatgtctcatgtaggagtaagctttcaactttgttagtgcat 2873

                                                                        
Query: 593  cctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaa 652
             |||||  ||||| |||||||| || ||||| ||||||||||||||||||||||  ||||
Sbjct: 2872 tctgctgtgaggcttgctgcacatgtagtgcatgttgcagctcatgactaggaacttgaa 2813

                                                                        
Query: 653  taaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaa 712
            | ||||| |||||||||||||||| ||||||  ||||| |  | ||||| || || ||||
Sbjct: 2812 tgaaacaaaatactccagtgatgacaccatctgcatttacttttctgttaacagaaagaa 2753

                                            
Query: 713  ggcactcagtgtacttcccgcttcggtcgaag 744
            |||||||  | ||||||||| | |||||||||
Sbjct: 2752 ggcactcgatatacttcccgttccggtcgaag 2721



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 390  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 449
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 3570 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 3511

                                      
Query: 450  acgaacatcgccgttcatgagcctca 475
             || |||||||| |||||||||||||
Sbjct: 3510 tcggacatcgccattcatgagcctca 3485

---

>gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtc 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 3747 accattcatgagcctca 3731

---

>gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttccct 443
            ||||||||| || |||||||||||| ||||||| || ||||||||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccct 3763

---

>gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 2948 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2889

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2888 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2829

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2828 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2769

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2768 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2709

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2708 gaaggca 2702



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttccct 443
            ||||||||| || |||||||||||| ||||||| || ||||||||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccct 3763

---

>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence
          Length = 152439

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Plus

                                                                          
Query: 470    gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
              |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 134963 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 135022

                                                                          
Query: 530    ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
              |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 135023 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 135082

                                                                          
Query: 590    acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
                | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 135083 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 135142

                                                                          
Query: 650    gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
              |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 135143 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 135202

                     
Query: 710    gaaggca 716
              |||||||
Sbjct: 135203 gaaggca 135209



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                          
Query: 399    agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
              ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 134104 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 134163

                               
Query: 459    gccgttcatgagcctca 475
               || |||||||||||||
Sbjct: 134164 accattcatgagcctca 134180

---

>gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, complete cds
          Length = 3805

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 3040 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 2981

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 2980 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 2921

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 2920 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 2861

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 2860 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 2801

                   
Query: 710  gaaggca 716
            |||||||
Sbjct: 2800 gaaggca 2794



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttccct 443
            ||||||||| || |||||||||||| ||||||| || ||||||||
Sbjct: 3606 agcaagttcagcagtgaggatgaaggttgacatgccagcttccct 3562

---

>gb|AY761820.1| Sorghum bicolor clone Rtx430 phytochrome A gene, partial sequence
          Length = 1442

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                       
Query: 470 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
           |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 640 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 581

                                                                       
Query: 530 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
           |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 580 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 521

                                                                       
Query: 590 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
             | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 520 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 461

                                                                       
Query: 650 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
           |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 460 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 401

                  
Query: 710 gaaggca 716
           |||||||
Sbjct: 400 gaaggca 394

---

>gb|AY761810.1| Sorghum bicolor clone BTx623 phytochrome A gene, partial sequence
          Length = 1442

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                       
Query: 470 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
           |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 640 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 581

                                                                       
Query: 530 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
           |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 580 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 521

                                                                       
Query: 590 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
             | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 520 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 461

                                                                       
Query: 650 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
           |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 460 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 401

                  
Query: 710 gaaggca 716
           |||||||
Sbjct: 400 gaaggca 394

---

>gb|AY761808.1| Sorghum bicolor clone 83707 phytochrome A gene, partial sequence
          Length = 1442

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                       
Query: 470 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
           |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 640 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 581

                                                                       
Query: 530 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
           |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 580 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 521

                                                                       
Query: 590 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
             | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 520 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 461

                                                                       
Query: 650 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
           |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 460 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 401

                  
Query: 710 gaaggca 716
           |||||||
Sbjct: 400 gaaggca 394

---

>gb|AY761782.1| Sorghum bicolor clone 213900 phytochrome A gene, partial sequence
          Length = 1442

 Score =  157 bits (79), Expect = 6e-35
 Identities = 205/247 (82%)
 Strand = Plus / Minus

                                                                       
Query: 470 gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
           |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 640 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 581

                                                                       
Query: 530 ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
           |||||||||| |||||||| ||||||| |||||| |||||||| |||| ||||||| |||
Sbjct: 580 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtg 521

                                                                       
Query: 590 acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
             | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 520 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 461

                                                                       
Query: 650 gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
           |||| |||||||| ||||||||||  | ||||||  ||||| |  | ||||||||||| |
Sbjct: 460 gaatgaaacagaacactccagtgacaacaccatctgcatttacttttctgttcactgaca 401

                  
Query: 710 gaaggca 716
           |||||||
Sbjct: 400 gaaggca 394

---

>gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds
          Length = 6700

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| |||||||||| | ||||| |||| |||| ||  ||||| |||||||| |
Sbjct: 4913 gcctcatctgctcttcattcagacctgtgctcttgagtgtttccctagaataaagcatac 4854

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||||||| ||||||| |||||| |||||||| |||| | ||||| |||
Sbjct: 4853 ctgagagaggtttgttgatggcatgtcgcatgtacgagaaagccttcaactttctttgtg 4794

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || ||||| |||| |||||||| ||
Sbjct: 4793 ctgtctgctcagaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacat 4734

                                    
Query: 650  gaataaaacagaatactccagtga 673
            | || |||||||| ||||||||||
Sbjct: 4733 ggatgaaacagaacactccagtga 4710



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 399  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 458
            ||||||||| || ||||| |||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 5774 agcaagttcagcagtgagaatgaaggttgacatgccagcttccctgaggtgacgaatgtc 5715

                             
Query: 459  gccgttcatgagcctca 475
             || |||||||||||||
Sbjct: 5714 accattcatgagcctca 5698

---

>gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (phyA1) gene,
            complete cds
          Length = 8510

 Score =  117 bits (59), Expect = 5e-23
 Identities = 203/251 (80%)
 Strand = Plus / Minus

                                                                        
Query: 470  gcctcatctgttcttcattcaaatctgtgttctttagtgcttttctagagtaaagcatgc 529
            |||||||||| ||||||| ||  ||||||  ||| |||| ||  ||||| || ||||| |
Sbjct: 6237 gcctcatctgctcttcatccaggtctgtgcccttgagtgtttccctagaatagagcatac 6178

                                                                        
Query: 530  ctgagagaggattgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtg 589
            |||||||||| |||| ||| ||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 6177 ctgagagaggtttgtcgatggcatgtcgcatgtacgagaaagccttcagccttctcagtg 6118

                                                                        
Query: 590  acgcctgctccgaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatat 649
              | |||||| ||||| |||||||| || || || || || || |||| |||||||| ||
Sbjct: 6117 ctgtctgctcagaggcttgctgcacatgtagcgcatgctggaggtcatcactaggaacat 6058

                                                                        
Query: 650  gaataaaacagaatactccagtgatgagaccatcctcatttgccctgctgttcactgata 709
            |||| |||||||| ||||| |||| ||  |||||  ||||  |  | ||||||||||| |
Sbjct: 6057 gaatgaaacagaacactccggtgacgacgccatctgcattcacttttctgttcactgaca 5998

                       
Query: 710  gaaggcactca 720
            |||||||||||
Sbjct: 5997 gaaggcactca 5987



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 403  agttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcgccg 462
            ||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||||| 
Sbjct: 7028 agttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtcgcca 6969

                         
Query: 463  ttcatgagcctca 475
            |||||||||||||
Sbjct: 6968 ttcatgagcctca 6956

---

>gb|AY761819.1| Sorghum arundinaceum clone LWA88 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761818.1| Sorghum x drummondii clone LWA71 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761817.1| Sorghum arundinaceum clone LWA55 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761816.1| Sorghum arundinaceum clone LWA42 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761815.1| Sorghum arundinaceum clone LWA28 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761814.1| Sorghum arundinaceum clone LWA22 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761813.1| Sorghum arundinaceum clone LWA13 phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761812.1| Sorghum x drummondii clone LWA12b phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761811.1| Sorghum x drummondii clone LWA12a phytochrome A gene, partial
           sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761809.1| Sorghum bicolor clone 87088 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761807.1| Sorghum bicolor clone 77034b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761806.1| Sorghum bicolor clone 77034a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761805.1| Sorghum bicolor clone 55751b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761804.1| Sorghum bicolor clone 55751a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761803.1| Sorghum bicolor clone 51836 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761802.1| Sorghum bicolor clone 51397b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761801.1| Sorghum bicolor clone 51397a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761800.1| Sorghum bicolor clone 51365b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761799.1| Sorghum bicolor clone 51365a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761798.1| Sorghum bicolor clone 510985 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761797.1| Sorghum bicolor clone 510906b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761796.1| Sorghum bicolor clone 510906a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761795.1| Sorghum bicolor clone 51032 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761794.1| Sorghum bicolor clone 50875 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761793.1| Sorghum bicolor clone 50744 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761792.1| Sorghum bicolor clone 287624b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761791.1| Sorghum bicolor clone 287624a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761790.1| Sorghum bicolor clone 267525 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761789.1| Sorghum bicolor clone 267523 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761788.1| Sorghum bicolor clone 257595 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761787.1| Sorghum bicolor clone 221655 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761786.1| Sorghum bicolor clone 221607b phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761785.1| Sorghum bicolor clone 221607a phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761784.1| Sorghum bicolor clone 221540 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761783.1| Sorghum bicolor clone 22913 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY761781.1| Sorghum bicolor clone 152702 phytochrome A gene, partial sequence
          Length = 1442

 Score =  103 bits (52), Expect = 8e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 541 ttgttgattgcatgtctcatgtaggagaaagctttcagccttcttagtgacgcctgctcc 600
           |||||||| ||||||| |||||| |||||||| |||| ||||||| |||  | |||||| 
Sbjct: 569 ttgttgatggcatgtcgcatgtacgagaaagccttcaaccttctttgtgctgtctgctca 510

                                                                       
Query: 601 gaggcctgctgcacctgcagtgcttgttgcagctcatgactaggaatatgaataaaacag 660
           ||||| |||||||| || || || || ||||| |||| |||||||| |||||| ||||||
Sbjct: 509 gaggcttgctgcacatgtagcgcatgctgcaggtcatcactaggaacatgaatgaaacag 450

                                                                   
Query: 661 aatactccagtgatgagaccatcctcatttgccctgctgttcactgatagaaggca 716
           || ||||||||||  | ||||||  ||||| |  | ||||||||||| ||||||||
Sbjct: 449 aacactccagtgacaacaccatctgcatttacttttctgttcactgacagaaggca 394

---

>gb|AY106693.1| Zea mays PCO126085 mRNA sequence
          Length = 907

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                       
Query: 403 agttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcgccg 462
           ||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||||| 
Sbjct: 353 agttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtcgcca 294

                        
Query: 463 ttcatgagcctca 475
           |||||||||||||
Sbjct: 293 ttcatgagcctca 281

---

>gb|U60264.1|PAU60264 Picea abies phytochrome mRNA, complete cds
          Length = 3989

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 613  acctgcagtgcttgttgcagctcatgactaggaatatgaataaaacagaatactccagtg 672
            ||||||| ||||||||| |||||   ||||| || ||| | |||||||||||||||||||
Sbjct: 3030 acctgcaatgcttgttgaagctctgtactagtaacatgcaaaaaacagaatactccagtg 2971

              
Query: 673  at 674
            ||
Sbjct: 2970 at 2969

---

>gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, complete cds
          Length = 3574

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 619  agtgcttgttgcagctcatgactaggaa 646
            ||||||||||||| ||||||||||||||
Sbjct: 2785 agtgcttgttgcaactcatgactaggaa 2758

---

>emb|AL391152.3|CNS06C7Y Human chromosome 14 DNA sequence BAC R-613G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189385

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 471   cctcatctgttcttcattcaaatctgt 497
             |||||||||||||||| ||||||||||
Sbjct: 45825 cctcatctgttcttcactcaaatctgt 45851

---

>ref|XM_592363.2| PREDICTED: Bos taurus similar to epidermal growth factor receptor
            pathway substrate 8-like protein 1 isoform a (LOC514504),
            mRNA
          Length = 2549

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 361  ttgcttcttcatcactgcctca 382
            ||||||||||||||||||||||
Sbjct: 2214 ttgcttcttcatcactgcctca 2193

---

>gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, complete sequence
          Length = 201146

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 237    ttctgcattcacttaacactct 258
              ||||||||||||||||||||||
Sbjct: 138696 ttctgcattcacttaacactct 138717

---

>gb|AC068863.6| Homo sapiens chromosome 2, clone CTD-2170C4, complete sequence
          Length = 101618

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 237   ttctgcattcacttaacactct 258
             ||||||||||||||||||||||
Sbjct: 83287 ttctgcattcacttaacactct 83266

---

>gb|AC079203.9| Homo sapiens chromosome 15, clone RP11-1084A12, complete sequence
          Length = 197568

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 642    aggaatatgaataaaacagaa 662
              |||||||||||||||||||||
Sbjct: 191721 aggaatatgaataaaacagaa 191741

---

>gb|AF314938.1|F314931S08 Homo sapiens potassium-chloride transporter 3 (SLC12A6) gene, exon
           7
          Length = 359

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 642 aggaatatgaataaaacagaa 662
           |||||||||||||||||||||
Sbjct: 53  aggaatatgaataaaacagaa 33

---

>gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosome 5, complete sequence
          Length = 162871

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    cttacacatacatattacata 117
             |||||||||||||||||||||
Sbjct: 88024 cttacacatacatattacata 88044

---

>gb|AF522187.1| Bacillus pumilus BpmI endonuclease-methyltransferase fusion protein
           type IIG (bpmIR) and BpmI methyltransferase (bpmIM)
           genes, complete cds
          Length = 5800

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 641 taggaatatgaataaaacaga 661
           |||||||||||||||||||||
Sbjct: 590 taggaatatgaataaaacaga 610

---

>gb|AC108460.5| Homo sapiens chromosome 11, clone CTD-2302A16, complete sequence
          Length = 149148

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 649   tgaataaaacagaatactcca 669
             |||||||||||||||||||||
Sbjct: 50206 tgaataaaacagaatactcca 50186

---

>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence
          Length = 180765

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 649    tgaataaaacagaatactcca 669
              |||||||||||||||||||||
Sbjct: 110588 tgaataaaacagaatactcca 110568

---

>gb|AC021822.21| Homo sapiens chromosome 15, clone RP11-122P18, complete sequence
          Length = 95800

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 642  aggaatatgaataaaacagaa 662
            |||||||||||||||||||||
Sbjct: 4619 aggaatatgaataaaacagaa 4639

---

>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 604    gcctgctgcacctgcagtgct 624
              |||||||||||||||||||||
Sbjct: 118665 gcctgctgcacctgcagtgct 118645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,620,155
Number of Sequences: 3902068
Number of extensions: 6620155
Number of successful extensions: 126613
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 126410
Number of HSP's gapped (non-prelim): 207
length of query: 744
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 721
effective length of database: 17,143,297,704
effective search space: 12360317644584
effective search space used: 12360317644584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)

---