Clone Name | rbasd19f16 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Minus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 784 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 725 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 724 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 665 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 664 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 605 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 604 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 545 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 544 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 485 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 484 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 425 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 424 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 365 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 364 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 974 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 915 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 914 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 861
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Plus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 34289682 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 34289741 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 34289742 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 34289801 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 34289802 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 34289861 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 34289862 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 34289921 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 34289922 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 34289981 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 34289982 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 34290041 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 34290042 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 34290101 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 34290102 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 34290155 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 34289492 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 34289551 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 34289552 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 34289605 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 35129438 acgatgttggagtcggcatggtcacggagctc 35129469 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Plus Query: 662 gtacctctcttggccagcagtatcccatat 691 |||||||||||| ||||| ||||||||||| Sbjct: 2840762 gtacctctcttgtccagcggtatcccatat 2840791 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatccca 688 |||||||||||||||||||| Sbjct: 34105177 tcttggccagcagtatccca 34105158
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Plus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 34380154 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 34380213 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 34380214 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 34380273 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 34380274 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 34380333 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 34380334 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 34380393 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 34380394 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 34380453 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 34380454 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 34380513 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 34380514 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 34380573 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 34380574 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 34380627 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 34379964 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 34380023 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 34380024 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 34380077 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 35219510 acgatgttggagtcggcatggtcacggagctc 35219541 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Plus Query: 662 gtacctctcttggccagcagtatcccatat 691 |||||||||||| ||||| ||||||||||| Sbjct: 2840873 gtacctctcttgtccagcggtatcccatat 2840902 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatccca 688 |||||||||||||||||||| Sbjct: 34195649 tcttggccagcagtatccca 34195630
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Minus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 45316 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 45257 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 45256 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 45197 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 45196 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 45137 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 45136 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 45077 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 45076 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 45017 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 45016 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 44957 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 44956 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 44897 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 44896 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 44843 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 45506 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 45447 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 45446 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 45393
>dbj|AK067508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L21, full insert sequence Length = 3009 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Minus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 2767 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 2708 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 2707 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 2648 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 2647 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 2588 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 2587 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 2528 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 2527 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 2468 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 2467 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 2408 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 2407 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 2348 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 2347 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 2294 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 2957 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 2898 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 2897 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 2844
>dbj|AK061336.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B12, full insert sequence Length = 1217 Score = 480 bits (242), Expect = e-132 Identities = 416/474 (87%) Strand = Plus / Minus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||| ||||| ||| ||||||||||| | | ||||| | |||||||||||||| Sbjct: 783 cctaggaagaacagcatcctctctttgtgttaacagcagaatcagtaacattgatggtgg 724 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||||| |||||||||||||| || ||||| ||||||||||| ||||||||||| | Sbjct: 723 ttccttgagtgggaggtccactgcctgctgcctcttgggcagcaagtgccttcttgctga 664 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 |||| ||||| || || ||||||||||||||| |||||||| ||||| | |||||||| Sbjct: 663 tgatttgatgaatatctttaaggatagtctgaaatgccttctcaacattaagggcttcca 604 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | ||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||| Sbjct: 603 gagctgaggtctcgaggaatgatagaccttccttctctgctagtgcctgaccatcttcct 544 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| ||||| ||||||||||| || || || ||||| || |||||||| || || |||| Sbjct: 543 ctggaactgatctcaggtggttaaggtctgatttgttgcctaccatcataatgacaatgt 484 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| ||||| ||||| || |||||||||||||| | |||||||||||| || |||| Sbjct: 483 tggagtccgcatgatcacgaagttcacgaagccacctctggatgttttcaaacgtctgct 424 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||||||||||||||| || | |||||| ||||||||||||| ||||||||||||||||| Sbjct: 423 tctttgttatgtcatagactagaagtgcccccacagctccccggtagtaagcacttgtga 364 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtct 708 |||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 363 ttgcacggtacctctcctgcccagcagtatcccatatctgagctttgatggtct 310 Score = 81.8 bits (41), Expect = 3e-12 Identities = 97/114 (85%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 46 gtctctaccaaaaatttgcaactacacacggtatctacc----aaggataatttctttct 101 ||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 973 gtctctaccaaaattttgcaactacacatggtatctaccttaaaaggaatatttctttct 914 Query: 102 agcagtatgaactttaat-acaacctcaccagaattacaggccaaaaggagtca 154 ||| | | || | | || |||||| |||||||||||||||||||||||||||| Sbjct: 913 agcgatttaaattgtgattacaaccccaccagaattacaggccaaaaggagtca 860
>gb|BT023992.1| Zea mays clone EL01N0409D10 mRNA sequence Length = 1150 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Minus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||||||||||||| ||| |||| | || ||||| ||||| |||||||||| Sbjct: 773 cctaggaagagcagcaccctcccttcatgttggcagacgaatccgcaacgttgatggtgg 714 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||| Sbjct: 713 ttccttgacctggaggtccactgcctgctgcctcttgggctgcaagcgccttcttgctta 654 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 ||||||||||||||||||| |||| |||||||||||||||||||| || | |||||| | Sbjct: 653 tgatctgatggatgtcggagaggacggtctgaaacgccttctcgacgttaagggcttcga 594 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | || || ||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 593 gggcggatgtctcgaggaaggataggccttccttctccgctaacgcctgcccatcttcct 534 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| || |||||||||||||| || || |||||||| || |||||||| || || |||| Sbjct: 533 ctggaaccgacctcaggtggttcaggtcggacttgttgccgaccatcatgatcacaatgt 474 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| || |||||||||||||| || |||||||| | ||||||||||| || |||| Sbjct: 473 tggagtccgcgtggtcacggagctcgcggagccacctctgtatgttttcaaatgtctgct 414 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||| || |||||||| || | |||||| ||||| ||||| ||||||||||||||||||| Sbjct: 413 tcttcgtgatgtcatagactagaagtgcacccacggctcctctgtagtaagcacttgtga 354 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggt 706 ||||||||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 353 ttgcacggtacctctcttgccccgcagtatcccatatttgagctttgatggt 302
>gb|AY110333.1| Zea mays CL8515_1 mRNA sequence Length = 1118 Score = 436 bits (220), Expect = e-119 Identities = 409/472 (86%) Strand = Plus / Plus Query: 235 cctaggtagagcagcaccctttctttgtgttaccggatgaatcggcaacattgatggtgg 294 |||||| ||||||||||||| ||| |||| | || ||||| ||||| |||||||||| Sbjct: 352 cctaggaagagcagcaccctcccttcatgttggcagacgaatccgcaacgttgatggtgg 411 Query: 295 ttccttgagtcggaggtccactgccagcagcctcctgggcagcaagcgccttcttgctta 354 |||||||| ||||||||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 412 ttccttgacctggaggtccactacctgctgcctcttgggctgcaagcgccttcttgctta 471 Query: 355 tgatctgatggatgtcggaaaggatagtctgaaacgccttctcgacattcaaggcttcca 414 ||||||||||||||||||| |||| |||||||||||||||||||| || | |||||| | Sbjct: 472 tgatctgatggatgtcggagaggacggtctgaaacgccttctcgacgttaagggcttcga 531 Query: 415 gtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcct 474 | || || ||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 532 gggcggatgtctcgaggaaggataggccttccttctccgctaacgcctgcccatcttcct 591 Query: 475 ctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgt 534 |||| || |||||||||||||| || || |||||||| || |||||||| || ||||||| Sbjct: 592 ctggaaccgacctcaggtggttcaggtcggacttgttgccgaccatcatgatcacgatgt 651 Query: 535 tggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgct 594 ||||||| || |||||||||||||| || |||||||| | ||||||||||| || |||| Sbjct: 652 tggagtccgcgtggtcacggagctcgcggagccacctctgtatgttttcaaatgtctgct 711 Query: 595 tctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtga 654 |||| || |||||||| || | |||||| ||||| ||||| ||||||||||||||||||| Sbjct: 712 tcttcgtgatgtcatagactagaagtgcacccacggctcctctgtagtaagcacttgtga 771 Query: 655 ttgcacggtacctctcttggccagcagtatcccatatctgagctttaatggt 706 ||||||||||||||||||| || |||||||||||||| |||||||| ||||| Sbjct: 772 ttgcacggtacctctcttgccccgcagtatcccatatttgagctttgatggt 823
>ref|NM_190607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 651 Score = 155 bits (78), Expect = 2e-34 Identities = 237/290 (81%) Strand = Plus / Minus Query: 408 gcttccagtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggcca 467 |||||||| || || ||||| |||||||| || ||||| ||||| | || || |||||| Sbjct: 476 gcttccagagcagacgtctcaaggaaggagagaccttctttctcagagaacgcatggcca 417 Query: 468 tcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattata 527 |||||||| |||||||| | || ||||| | |||||||||||||| |||||||| | | Sbjct: 416 tcttcctcggggactgatcgtagatggtttaagtcagacttgtttccgaccatcatgaca 357 Query: 528 acgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaa 587 || ||||||| ||| |||||||| |||||||| || |||||||| | | || || || Sbjct: 356 acaatgttggcgtctgcatggtcccggagctcccgcagccacctctgaacattgtcgaag 297 Query: 588 gtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagca 647 |||||| ||||||||||||| | || | ||||||||| || || |||||||| |||||| Sbjct: 296 gtttgcctctttgttatgtcgaatacaagaagtgctccaactgcacccctgtaataagca 237 Query: 648 cttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 || |||||||||||||| |||||||| || || || |||||||||||||| Sbjct: 236 ctcgtgattgcacggtatctctcttgacctgccgtgtcccatatctgagc 187
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 155 bits (78), Expect = 2e-34 Identities = 237/290 (81%) Strand = Plus / Plus Query: 408 gcttccagtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggcca 467 |||||||| || || ||||| |||||||| || ||||| ||||| | || || |||||| Sbjct: 36461651 gcttccagagcagacgtctcaaggaaggagagaccttctttctcagagaacgcatggcca 36461710 Query: 468 tcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattata 527 |||||||| |||||||| | || ||||| | |||||||||||||| |||||||| | | Sbjct: 36461711 tcttcctcggggactgatcgtagatggtttaagtcagacttgtttccgaccatcatgaca 36461770 Query: 528 acgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaa 587 || ||||||| ||| |||||||| |||||||| || |||||||| | | || || || Sbjct: 36461771 acaatgttggcgtctgcatggtcccggagctcccgcagccacctctgaacattgtcgaag 36461830 Query: 588 gtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagca 647 |||||| ||||||||||||| | || | ||||||||| || || |||||||| |||||| Sbjct: 36461831 gtttgcctctttgttatgtcgaatacaagaagtgctccaactgcacccctgtaataagca 36461890 Query: 648 cttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 || |||||||||||||| |||||||| || || || |||||||||||||| Sbjct: 36461891 ctcgtgattgcacggtatctctcttgacctgccgtgtcccatatctgagc 36461940 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 668 ctcttggccagcagtatccca 688 ||||||||||||||||||||| Sbjct: 21140673 ctcttggccagcagtatccca 21140693
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 155 bits (78), Expect = 2e-34 Identities = 237/290 (81%) Strand = Plus / Plus Query: 408 gcttccagtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggcca 467 |||||||| || || ||||| |||||||| || ||||| ||||| | || || |||||| Sbjct: 113490 gcttccagagcagacgtctcaaggaaggagagaccttctttctcagagaacgcatggcca 113549 Query: 468 tcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattata 527 |||||||| |||||||| | || ||||| | |||||||||||||| |||||||| | | Sbjct: 113550 tcttcctcggggactgatcgtagatggtttaagtcagacttgtttccgaccatcatgaca 113609 Query: 528 acgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaa 587 || ||||||| ||| |||||||| |||||||| || |||||||| | | || || || Sbjct: 113610 acaatgttggcgtctgcatggtcccggagctcccgcagccacctctgaacattgtcgaag 113669 Query: 588 gtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagca 647 |||||| ||||||||||||| | || | ||||||||| || || |||||||| |||||| Sbjct: 113670 gtttgcctctttgttatgtcgaatacaagaagtgctccaactgcacccctgtaataagca 113729 Query: 648 cttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 || |||||||||||||| |||||||| || || || |||||||||||||| Sbjct: 113730 ctcgtgattgcacggtatctctcttgacctgccgtgtcccatatctgagc 113779
>dbj|AK071303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087L18, full insert sequence Length = 1131 Score = 155 bits (78), Expect = 2e-34 Identities = 237/290 (81%) Strand = Plus / Minus Query: 408 gcttccagtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggcca 467 |||||||| || || ||||| |||||||| || ||||| ||||| | || || |||||| Sbjct: 658 gcttccagagcagacgtctcaaggaaggagagaccttctttctcagagaacgcatggcca 599 Query: 468 tcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcattata 527 |||||||| |||||||| | || ||||| | |||||||||||||| |||||||| | | Sbjct: 598 tcttcctcggggactgatcgtagatggtttaagtcagacttgtttccgaccatcatgaca 539 Query: 528 acgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaa 587 || ||||||| ||| |||||||| |||||||| || |||||||| | | || || || Sbjct: 538 acaatgttggcgtctgcatggtcccggagctcccgcagccacctctgaacattgtcgaag 479 Query: 588 gtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagca 647 |||||| ||||||||||||| | || | ||||||||| || || |||||||| |||||| Sbjct: 478 gtttgcctctttgttatgtcgaatacaagaagtgctccaactgcacccctgtaataagca 419 Query: 648 cttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 || |||||||||||||| |||||||| || || || |||||||||||||| Sbjct: 418 ctcgtgattgcacggtatctctcttgacctgccgtgtcccatatctgagc 369
>ref|NM_100615.1| Arabidopsis thaliana GTP binding AT1G07410 mRNA, complete cds Length = 645 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 507 ttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctcacgaagc 566 ||||||||| ||||||| ||||| |||||||| |||||||| || | |||||||| | | Sbjct: 377 ttgtttccagccatcatgataacaatgttggaatcagcatgatcccttagctcacgtaac 318 Query: 567 cacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaagtgctccc 626 || || || || ||||||||||| |||| |||||||| || || | ||| ||||| Sbjct: 317 catctcaagacattctcaaaagtttgtctcttggttatgtcgtagacaagaagagctcca 258 Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||||||||||||||||||||| || || | |||||| || ||||| ||| Sbjct: 257 acagctcctctgtagtaagcacttgtgattgctcgataacgctcttgacctgcagtgtcc 198 Query: 687 catatctgagc 697 || |||||||| Sbjct: 197 caaatctgagc 187
>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I, complete sequence Length = 104830 Score = 101 bits (51), Expect = 3e-18 Identities = 156/191 (81%) Strand = Plus / Plus Query: 507 ttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctcacgaagc 566 ||||||||| ||||||| ||||| |||||||| |||||||| || | |||||||| | | Sbjct: 67175 ttgtttccagccatcatgataacaatgttggaatcagcatgatcccttagctcacgtaac 67234 Query: 567 cacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaagtgctccc 626 || || || || ||||||||||| |||| |||||||| || || | ||| ||||| Sbjct: 67235 catctcaagacattctcaaaagtttgtctcttggttatgtcgtagacaagaagagctcca 67294 Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||||||||||||||||||||| || || | |||||| || ||||| ||| Sbjct: 67295 acagctcctctgtagtaagcacttgtgattgctcgataacgctcttgacctgcagtgtcc 67354 Query: 687 catatctgagc 697 || |||||||| Sbjct: 67355 caaatctgagc 67365
>emb|Z71276.1|MIRABX M.indica mRNA for small GTPase Length = 1109 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 606 tcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtac 665 |||||||||| ||| || || |||||||| | |||||||||||| || || ||||||||| Sbjct: 489 tcatacaccagaagggcaccaacagctccacggtagtaagcactggttatggcacggtac 430 Query: 666 ctctcttggccagcagtatcccatatctgagc 697 || |||||||||||||||||||| |||||||| Sbjct: 429 ctttcttggccagcagtatcccaaatctgagc 398
>ref|NM_100520.2| Arabidopsis thaliana ARA2; GTP binding AT1G06400 (ARA2) mRNA, complete cds Length = 937 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 301 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 242 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 241 caaatctgagcttt 228
>gb|AF332428.1| Arabidopsis thaliana putative GTP-binding protein RAB11D (At1g06400) mRNA, complete cds Length = 651 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 260 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 201 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 200 caaatctgagcttt 187
>gb|AY096439.1| Arabidopsis thaliana putative GTP-binding protein (At1g06400) mRNA, complete cds Length = 682 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 260 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 201 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 200 caaatctgagcttt 187
>gb|AY065306.1| Arabidopsis thaliana putative GTP-binding protein RAB11D (At1g06400) mRNA, complete cds Length = 957 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 305 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 246 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 245 caaatctgagcttt 232
>emb|BX815056.1|CNS0ACVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 831 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 277 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 218 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 217 caaatctgagcttt 204
>dbj|D01024.1|ATHARA2 Arabidopsis thaliana mRNA for small GTP-binding protein (ara-2), complete cds Length = 844 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 293 acagctcctctgtaataagcgcttgtgattgctcggtatctctcttgaccagcagtatcc 234 Query: 687 catatctgagcttt 700 || ||||||||||| Sbjct: 233 caaatctgagcttt 220
>emb|X98540.1|FSGTP1 F.sylvatica mRNA for GTP1 protein Length = 915 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 606 tcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtac 665 |||||||| | ||| ||||| ||||||||||| |||||||||||||| || || | ||| Sbjct: 362 tcatacactagaagagctccaacagctcccctatagtaagcacttgttatggctctgtat 303 Query: 666 ctctcttggccagcagtatcccatatctgagcttt 700 ||||| || || ||||||||||||||||||||||| Sbjct: 302 ctctcctgtcctgcagtatcccatatctgagcttt 268 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 atgttggagtcagcatggtc 550 |||||||||||||||||||| Sbjct: 431 atgttggagtcagcatggtc 412
>gb|BT017614.1| Zea mays clone EL01N0433D01.c mRNA sequence Length = 1229 Score = 83.8 bits (42), Expect = 7e-13 Identities = 132/162 (81%) Strand = Plus / Minus Query: 536 ggagtcagcatggtcacggagctcacgaagccacctattgatgttttcaaaagtttgctt 595 ||||||||||||||| ||||| |||||||||||||| | | || || || | ||| | Sbjct: 590 ggagtcagcatggtcgcggagttcacgaagccacctgtgaacattgtcgaagctctgcct 531 Query: 596 ctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgat 655 |||||| ||||| ||||| | || |||||||| ||||| | |||||| |||||||| || Sbjct: 530 ctttgtgatgtcgtacacaaggagggctcccacggctccacggtagtaggcacttgtaat 471 Query: 656 tgcacggtacctctcttggccagcagtatcccatatctgagc 697 |||||||||||| || || ||||| || ||||| |||||||| Sbjct: 470 tgcacggtacctttcctgcccagctgtgtcccagatctgagc 429
>dbj|D12545.1|PEAGTPBP06 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra6 Length = 855 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 ||||||||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 266 tagtaagcactggtgatggcacgatacctctcttgaccagcagtatcccagatctgagcc 207 Query: 699 ttaatg 704 |||||| Sbjct: 206 ttaatg 201
>dbj|D12543.1|PEAGTPBP04 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra4 Length = 864 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 638 gtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 |||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 281 gtagtaagcacttgtgattgcacgatatctttcttgtccagcagtatcccaaatctgagc 222 Query: 698 tttaa 702 |||| Sbjct: 221 cttaa 217
>ref|NM_125479.2| Arabidopsis thaliana GTP binding AT5G60860 mRNA, complete cds Length = 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| ||||| || |||||||||||||| || || || ||||||||||| Sbjct: 387 gctcctacagctcctctgtaatatgcacttgtgattgctcgatatctttcttggccagcg 328 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 327 gtatcccaaatctgagcttt 308
>emb|Z49190.1|BVRAB2 B.vulgaris mRNA for small G protein (clone 1S2) Length = 1215 Score = 79.8 bits (40), Expect = 1e-11 Identities = 187/236 (79%) Strand = Plus / Minus Query: 459 gcctggccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaacc 518 ||||| |||||||| |||| ||| | ||||| || || ||||| |||||||||||| || Sbjct: 605 gcctgtccatcttcttctgagacggctctcagatgctttagatcggacttgtttccagcc 546 Query: 519 atcattataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatg 578 ||||| || || || || || || || ||||| || || |||||||||||||| | || Sbjct: 545 atcataatgacaatattagaatctgcgtggtctcgcagttcacgaagccacctctggaca 486 Query: 579 ttttcaaaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctg 638 || ||||| ||||| |||| ||||| || || || | ||| || || ||||| || ||| Sbjct: 485 ttatcaaatgtttgtctcttagttatatcgtagacaagaagagcaccaacagcacctctg 426 Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| ||||| || || || | ||| || |||||||||||||||||||| Sbjct: 425 tagtaagcactggtgatagcccgataacgctcctgaccagcagtatcccatatctg 370
>gb|BT005238.1| Arabidopsis thaliana At5g60860 mRNA, complete cds Length = 654 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| ||||| || |||||||||||||| || || || ||||||||||| Sbjct: 266 gctcctacagctcctctgtaatatgcacttgtgattgctcgatatctttcttggccagcg 207 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 206 gtatcccaaatctgagcttt 187
>dbj|AK118670.1| Arabidopsis thaliana At5g60860 mRNA for putative GTP-binding protein, complete cds, clone: RAFL19-94-D08 Length = 915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| ||||| || |||||||||||||| || || || ||||||||||| Sbjct: 387 gctcctacagctcctctgtaatatgcacttgtgattgctcgatatctttcttggccagcg 328 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 327 gtatcccaaatctgagcttt 308
>gb|L29269.1|TOBNTRAB Nicotiana tabacum SR1 Nt-rab11b mRNA, complete cds Length = 924 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 ||||| || |||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 275 acagcccctctgtagtatgcacttgtaattgcacggtacctttcttggccagcagtgtcc 216 Query: 687 catatctg 694 || ||||| Sbjct: 215 caaatctg 208
>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH138P04, complete sequence Length = 137697 Score = 79.8 bits (40), Expect = 1e-11 Identities = 169/212 (79%) Strand = Plus / Minus Query: 486 ctcaggtggttgagatcagacttgtttccaaccatcattataacgatgttggagtcagca 545 ||||||||||| ||||| || ||||||||| ||||||| || || |||||||||||||| Sbjct: 106967 ctcaggtggtttagatctgatttgtttccagccatcatgatcacaatgttggagtcagcg 106908 Query: 546 tggtcacggagctcacgaagccacctattgatgttttcaaaagtttgcttctttgttatg 605 ||||| | ||||| | | ||| || || || ||||| ||||| |||| |||||| Sbjct: 106907 tggtccctaagctcgtgcaaccatctcaggacattctcaaaggtttgtctcttggttatg 106848 Query: 606 tcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtac 665 || || || | ||| ||||| |||||||| ||||||||||| |||||||| || | ||| Sbjct: 106847 tcgtagacgagaagagctccaacagctcctctgtagtaagcgcttgtgatcgctctgtaa 106788 Query: 666 ctctcttggccagcagtatcccatatctgagc 697 | |||||| || || || |||||||||||||| Sbjct: 106787 cgctcttgtcctgctgtgtcccatatctgagc 106756
>emb|Z73953.1|LJRAB11E L.japonicus mRNA for small GTP-binding protein, RAB11E Length = 901 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | |||||||||||| || || ||||||||||| ||||| |||||||||||| Sbjct: 272 acagctccgcggtagtaagcactggtaatggcacggtacctttcttgtccagcagtatcc 213 Query: 687 catatctgagc 697 || |||||||| Sbjct: 212 caaatctgagc 202
>gb|AY105457.1| Zea mays PCO149506 mRNA sequence Length = 1074 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 417 gctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcctct 476 ||||| |||||||||||| | |||||||||||||| || || || | ||| || ||||| Sbjct: 623 gctgacgtctcgaggaagaacagcccttccttctcagccaacgctttgccttcgtcctca 564 Query: 477 gggactgacctcaggtggttgagatcagacttgtttccaaccatcattataacgatgttg 536 | || | |||| |||| | || || || ||||| || |||||||| || |||||| || Sbjct: 563 gagatagctctcaagtggatcaggtcggatttgttgcccaccatcatgatcacgatgctg 504 Query: 537 gagtcagcatggtcacggagctcacgaagccacct 571 |||||||| ||||| |||||||||||||||||||| Sbjct: 503 gagtcagcgtggtcgcggagctcacgaagccacct 469 Score = 40.1 bits (20), Expect = 9.7 Identities = 50/60 (83%) Strand = Plus / Minus Query: 638 gtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 |||||| || ||||| || ||||||||||| || || ||||| || ||||| |||||||| Sbjct: 402 gtagtaggcgcttgtaatcgcacggtacctttcctgcccagctgtgtcccagatctgagc 343
>gb|L29270.1|TOBNTRAC Nicotiana tabacum SR1 Nt-rab11d mRNA, complete cds Length = 1024 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 600 gttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgca 659 ||||||||||| ||||| | ||||| ||||||||||||||||| |||||||||| || Sbjct: 396 gttatgtcataaaccaacatagctccaacagctcccctgtagtatgcacttgtgacggct 337 Query: 660 cggtacctctcttggccagcagtatcccatatctgagctttaa 702 | || | ||||| |||||||||||||| ||||||||||||| Sbjct: 336 ctatatcgttcttgaccagcagtatcccagatctgagctttaa 294
>ref|NM_125305.2| Arabidopsis thaliana GTP binding AT5G59150 mRNA, complete cds Length = 997 Score = 75.8 bits (38), Expect = 2e-10 Identities = 182/230 (79%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 577 ccatcttcctccgcaactgatctcaagtggtttagatcagctttgttcccagccatcatg 518 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 || || |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 517 atcacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 458 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 457 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 398 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 397 gcacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 348
>ref|XM_476275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 654 Score = 75.8 bits (38), Expect = 2e-10 Identities = 158/198 (79%) Strand = Plus / Minus Query: 500 atcagacttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctc 559 ||||||||| || || |||||||| ||||| ||| | ||||| |||||||| |||||||| Sbjct: 384 atcagacttattaccgaccatcatgataacaatgctcgagtcggcatggtcgcggagctc 325 Query: 560 acgaagccacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaag 619 |||||||||||| | || || || || | ||| ||||||| ||||| || || | || Sbjct: 324 acgaagccacctgtggacattgtcgaagctctgcctctttgtgatgtcgtaaacaaggag 265 Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 || || ||||| || | |||||||||||||||||| ||||| || ||||| || || || Sbjct: 264 agccccaacagcgccacggtagtaagcacttgtgatggcacgatatctctcctgtcctgc 205 Query: 680 agtatcccatatctgagc 697 || ||||| |||||||| Sbjct: 204 tgtgtcccagatctgagc 187
>gb|BT014154.1| Lycopersicon esculentum clone 133274R, mRNA sequence Length = 967 Score = 75.8 bits (38), Expect = 2e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 597 tttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgatt 656 |||||||||||||| ||||| | ||||| ||||||||||||||||| || ||||||| Sbjct: 359 tttgttatgtcataaaccaacatagctccaacagctcccctgtagtatgcgcttgtgaca 300 Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaa 702 || | || | ||||| |||||||||||||| ||||||||||||| Sbjct: 299 gctctatatcgttcttgaccagcagtatcccagatctgagctttaa 254
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 75.8 bits (38), Expect = 2e-10 Identities = 158/198 (79%) Strand = Plus / Plus Query: 500 atcagacttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctc 559 ||||||||| || || |||||||| ||||| ||| | ||||| |||||||| |||||||| Sbjct: 68280 atcagacttattaccgaccatcatgataacaatgctcgagtcggcatggtcgcggagctc 68339 Query: 560 acgaagccacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaag 619 |||||||||||| | || || || || | ||| ||||||| ||||| || || | || Sbjct: 68340 acgaagccacctgtggacattgtcgaagctctgcctctttgtgatgtcgtaaacaaggag 68399 Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 || || ||||| || | |||||||||||||||||| ||||| || ||||| || || || Sbjct: 68400 agccccaacagcgccacggtagtaagcacttgtgatggcacgatatctctcctgtcctgc 68459 Query: 680 agtatcccatatctgagc 697 || ||||| |||||||| Sbjct: 68460 tgtgtcccagatctgagc 68477
>emb|Z29592.1|VFGNRPR3 V.faba mRNA for guanine nucleotide regulatory protein (807bp) Length = 807 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 ||||||||||| ||||| ||||| ||||||||||| || ||||||||||| |||||||| Sbjct: 299 tagtaagcactggtgatggcacgatacctctcttgacccgcagtatcccagatctgagcc 240 Query: 699 ttaatg 704 |||||| Sbjct: 239 ttaatg 234
>gb|AY040051.1| Arabidopsis thaliana putative GTP-binding protein rab11 (At5g59150) mRNA, complete cds Length = 654 Score = 75.8 bits (38), Expect = 2e-10 Identities = 182/230 (79%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 419 ccatcttcctccgcaactgatctcaagtggtttagatcagctttgttcccagccatcatg 360 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 || || |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 359 atcacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 300 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 299 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 240 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 239 gcacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 190
>gb|AF370127.1| Arabidopsis thaliana putative GTP-binding protein rab11 (At5g59150) mRNA, complete cds Length = 958 Score = 75.8 bits (38), Expect = 2e-10 Identities = 182/230 (79%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 575 ccatcttcctccgcaactgatctcaagtggtttagatcagctttgttcccagccatcatg 516 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 || || |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 515 atcacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 456 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 455 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 396 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 395 gcacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 346
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 2e-10 Identities = 158/198 (79%) Strand = Plus / Plus Query: 500 atcagacttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctc 559 ||||||||| || || |||||||| ||||| ||| | ||||| |||||||| |||||||| Sbjct: 11623845 atcagacttattaccgaccatcatgataacaatgctcgagtcggcatggtcgcggagctc 11623904 Query: 560 acgaagccacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaag 619 |||||||||||| | || || || || | ||| ||||||| ||||| || || | || Sbjct: 11623905 acgaagccacctgtggacattgtcgaagctctgcctctttgtgatgtcgtaaacaaggag 11623964 Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 || || ||||| || | |||||||||||||||||| ||||| || ||||| || || || Sbjct: 11623965 agccccaacagcgccacggtagtaagcacttgtgatggcacgatatctctcctgtcctgc 11624024 Query: 680 agtatcccatatctgagc 697 || ||||| |||||||| Sbjct: 11624025 tgtgtcccagatctgagc 11624042 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacct 667 ||||||||||||||||| ||| || ||||| ||||| ||||| ||||| Sbjct: 25425434 tgctcccacagctccccggtaataggcactagtgatagcacgatacct 25425481 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 672 tggccagcagtatcccatatctg 694 ||||||||||||||||||||||| Sbjct: 25421761 tggccagcagtatcccatatctg 25421739
>emb|BX833729.1|CNS09YYS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 75.8 bits (38), Expect = 2e-10 Identities = 182/230 (79%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | |||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 574 ccatcttcctccgcaactgttctcaagtggtttagatcagctttgttcccagccatcatg 515 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 ||||| |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 514 ataacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 455 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 454 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 395 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 394 gcacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 345
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 75.8 bits (38), Expect = 2e-10 Identities = 182/230 (79%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 17281 ccatcttcctccgcaactgatctcaagtggtttagatcagctttgttcccagccatcatg 17222 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 || || |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 17221 atcacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 17162 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 17161 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 17102 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 17101 gcacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 17052
>dbj|D13152.1|RICRGP2 Oryza sativa (japonica cultivar-group) rgp2 mRNA for GTP binding protein, complete cds Length = 823 Score = 75.8 bits (38), Expect = 2e-10 Identities = 158/198 (79%) Strand = Plus / Minus Query: 500 atcagacttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctc 559 ||||||||| || || |||||||| ||||| ||| | ||||| |||||||| |||||||| Sbjct: 448 atcagacttattaccgaccatcatgataacaatgctcgagtcggcatggtcgcggagctc 389 Query: 560 acgaagccacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaag 619 |||||||||||| | || || || || | ||| ||||||| ||||| || || | || Sbjct: 388 acgaagccacctgtggacattgtcgaagctctgcctctttgtgatgtcgtaaacaaggag 329 Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 || || ||||| || | |||||||||||||||||| ||||| || ||||| || || || Sbjct: 328 agccccaacagcgccacggtagtaagcacttgtgatggcacgatatctctcctgtcctgc 269 Query: 680 agtatcccatatctgagc 697 || ||||| |||||||| Sbjct: 268 tgtgtcccagatctgagc 251
>ref|NM_101553.2| Arabidopsis thaliana RAB11; GTP binding AT1G16920 (RAB11) mRNA, complete cds Length = 912 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcca 677 ||||| ||||| ||||| | ||| || ||||| ||||| |||||||||||||| || ||| Sbjct: 371 agtgcacccacggctccacggtaatatgcactagtgatggcacggtacctctcctgacca 312 Query: 678 gcagtatcccatatctgagctttaa 702 ||||| ||||| ||||||||||||| Sbjct: 311 gcagtgtcccaaatctgagctttaa 287
>emb|X63874.1|NPYPT3 N.plumbaginifolia mRNA Np-ypt3 Length = 1044 Score = 73.8 bits (37), Expect = 7e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||||| || |||||||| || || ||||| || || |||||||||||||||||| Sbjct: 335 acagctccccgataataagcactagtaatggcacgatatctttcttggccagcagtatcc 276 Query: 687 catatctgagctttaat 703 || |||||||||||||| Sbjct: 275 caaatctgagctttaat 259
>gb|BT006406.1| Arabidopsis thaliana At1g16920 gene, complete cds Length = 651 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcca 677 ||||| ||||| ||||| | ||| || ||||| ||||| |||||||||||||| || ||| Sbjct: 269 agtgcacccacggctccacggtaatatgcactagtgatggcacggtacctctcctgacca 210 Query: 678 gcagtatcccatatctgagctttaa 702 ||||| ||||| ||||||||||||| Sbjct: 209 gcagtgtcccaaatctgagctttaa 185
>gb|AY086881.1| Arabidopsis thaliana clone 2904 mRNA, complete sequence Length = 895 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcca 677 ||||| ||||| ||||| | ||| || ||||| ||||| |||||||||||||| || ||| Sbjct: 372 agtgcacccacggctccacggtaatatgcactagtgatggcacggtacctctcctgacca 313 Query: 678 gcagtatcccatatctgagctttaa 702 ||||| ||||| ||||||||||||| Sbjct: 312 gcagtgtcccaaatctgagctttaa 288
>gb|L18883.1|ATHSGBP Arabidopsis thaliana small GTP-binding protein (Rab11) mRNA, complete cds Length = 854 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcca 677 ||||| ||||| ||||| | ||| || ||||| ||||| |||||||||||||| || ||| Sbjct: 323 agtgcacccacggctccacggtaatatgcactagtgatggcacggtacctctcctgacca 264 Query: 678 gcagtatcccatatctgagctttaa 702 ||||| ||||| ||||||||||||| Sbjct: 263 gcagtgtcccaaatctgagctttaa 239
>ref|NM_123942.1| Arabidopsis thaliana GTP binding AT5G45750 mRNA, complete cds Length = 1056 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| | ||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct: 468 gctccaacagctcctcggtaatacgcactagtgatggctcggtacctttcttgaccagca 409 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 408 gtatcccaaatctgagcttt 389
>gb|AY059111.1| Arabidopsis thaliana putative Rab-type small GTP-binding protein (At5g45750) mRNA, complete cds Length = 682 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| | ||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct: 266 gctccaacagctcctcggtaatacgcactagtgatggctcggtacctttcttgaccagca 207 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 206 gtatcccaaatctgagcttt 187
>gb|AF370219.1| Arabidopsis thaliana putative Rab-type small GTP-binding protein (At5g45750) mRNA, complete cds Length = 1049 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| | ||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct: 461 gctccaacagctcctcggtaatacgcactagtgatggctcggtacctttcttgaccagca 402 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 401 gtatcccaaatctgagcttt 382
>emb|BX833318.1|CNS09Z2Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 970 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| | ||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct: 440 gctccaacagctcctcggtaatacgcactagtgatggctcggtacctttcttgaccagca 381 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 380 gtatcccaaatctgagcttt 361
>gb|AY084274.1| Arabidopsis thaliana clone 102017 mRNA, complete sequence Length = 1056 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagca 680 ||||| |||||||| | ||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct: 468 gctccaacagctcctcggtaatacgcactagtgatggctcggtacctttcttgaccagca 409 Query: 681 gtatcccatatctgagcttt 700 |||||||| ||||||||||| Sbjct: 408 gtatcccaaatctgagcttt 389
>emb|Z29591.1|VFGNRPR2 V.faba mRNA for guanine nucleotide regulatory protein (744bp) Length = 744 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagcttt 700 ||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 216 taagcacttgtaattgctcggtacctttcttgaccggcagtatcccaaatctgagcttt 158
>emb|Z73957.1|LJRAB11I L.japonicus mRNA for small GTP-binding protein, RAB11I Length = 662 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| || |||||||||||||||||||||||||| || ||||| ||||| || ||| Sbjct: 107 acagctcctctatagtaagcacttgtgattgcacggtatctttcttgaccagcggtgtcc 48 Query: 687 ca 688 || Sbjct: 47 ca 46
>gb|DQ019491.1| Lilium longiflorum clone LP34 GTP-binding protein-like mRNA, partial sequence Length = 706 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| || |||||||| | |||||| ||||| |||||||| |||||||| ||||| || Sbjct: 383 aagtgcgccaacagctcctcggtagtatgcactcgtgattgctcggtacctttcttgccc 324 Query: 677 agcagtatcccatatctg 694 ||||||||||| ||||| Sbjct: 323 ggcagtatcccaaatctg 306
>emb|BX841708.1|CNS09YJT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 887 Score = 67.9 bits (34), Expect = 4e-08 Identities = 181/230 (78%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 536 ccatcttcctccgcaactgatctcaagtggtttagatcagctttgttcccagccatcatg 477 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacctattgatgttttca 584 || || |||||||| || |||||||| | || ||||| |||||||| | || ||| Sbjct: 476 atcacaatgttggaatccgcatggtctcttagttcacgtagccacctcagaacattgtca 417 Query: 585 aaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaa 644 || ||||| | || || |||||||| || | |||||| || || ||||| ||||| ||| Sbjct: 416 aaggtttgtcttttagtgatgtcatagacaagaagtgcacctaccgctcctctgtaataa 357 Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 | ||||||||| || | ||||| |||||| || ||||| ||||||||||| Sbjct: 356 gaacttgtgatagctctgtaccgctcttgacctgcagtgtcccatatctg 307
>gb|AY107805.1| Zea mays PCO073002 mRNA sequence Length = 1206 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 |||||||||||||| ||||| ||||||||||| || |||||||| ||||| || |||||| Sbjct: 401 tagtaagcacttgtaattgctcggtacctctcctgcccagcagtgtcccagatttgagct 342 Query: 699 tt 700 || Sbjct: 341 tt 340 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 531 atgttggagtcagcatggtcacggagctc 559 ||||| |||||||||||||| |||||||| Sbjct: 509 atgttcgagtcagcatggtcccggagctc 481
>gb|AY690483.1| Triticum aestivum rab GTP-binding protein mRNA, complete cds Length = 1280 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 606 tcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtac 665 |||||||| | ||| || || |||||||| ||||| || || ||||| |||||||| || Sbjct: 523 tcatacacaacaagcgcaccgacagctcctctgtaatatgcgcttgtaattgcacgatat 464 Query: 666 ctctcttggccagcagtatcccatatctg 694 |||||||||||||| |||||||| ||||| Sbjct: 463 ctctcttggccagccgtatcccagatctg 435
>emb|AJ245570.1|LES245570 Lycopersicon esculentum mRNA for Rab11 GTPase (Rab11a gene) Length = 1028 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||||| || |||||| |||| || ||||| ||||| ||||| |||||||||||| Sbjct: 291 acagctccccgataataagcaattgtaatggcacgatacctttcttgaccagcagtatcc 232 Query: 687 catatctgagctttaat 703 || || ||||||||||| Sbjct: 231 caaatttgagctttaat 215
>emb|X79278.1|MSRAB M.sativa Rab mRNA Length = 894 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 |||||||||||||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 281 tagtaagcacttgtaatggcgcgatacctttcttgaccagcagtatcccagatctgagcc 222 Query: 699 ttaat 703 ||||| Sbjct: 221 ttaat 217
>ref|NM_001004880.1| Xenopus tropicalis MGC88884 protein (MGC88884), mRNA Length = 1035 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacgg 662 |||||||| || || ||||||||||| || |||||||| |||||| |||||| || | | Sbjct: 292 atgtcataaactaacagtgctcccactgcacccctgtaataagcagatgtgatggctctg 233 Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 || |||||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 232 tatctctcttgtccagccgtgtcccagatctgagcctttatagtcttgc 184
>gb|BC075268.1| Xenopus tropicalis MGC88884 protein, mRNA (cDNA clone MGC:88884 IMAGE:6998325), complete cds Length = 1035 Score = 65.9 bits (33), Expect = 2e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacgg 662 |||||||| || || ||||||||||| || |||||||| |||||| |||||| || | | Sbjct: 292 atgtcataaactaacagtgctcccactgcacccctgtaataagcagatgtgatggctctg 233 Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 || |||||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 232 tatctctcttgtccagccgtgtcccagatctgagcctttatagtcttgc 184
>dbj|D12544.1|PEAGTPBP05 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra5 Length = 889 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagcttta 701 ||||||||||| ||||| |||||||| ||||| || || |||||||| |||||||||||| Sbjct: 332 taagcacttgtaattgctcggtacctttcttgaccggcggtatcccaaatctgagcttta 273 Query: 702 a 702 | Sbjct: 272 a 272
>dbj|AP004512.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10L16, TM0042, complete sequence Length = 85815 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 ||||||||||||| ||||||||||||||||||||||| Sbjct: 55263 acctctcttggccggcagtatcccatatctgagcttt 55227
>gb|BT012784.1| Lycopersicon esculentum clone 113774R, mRNA sequence Length = 1002 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 378 atagtctgaaacgccttctcgacattcaaggcttccagtgctgaggtctcgaggaaggat 437 ||||| ||||||||||| || ||||| || ||||||| |||||| ||||| || || || Sbjct: 633 atagtatgaaacgccttatcaacattaaaagcttccaatgctgacgtctcaagaaatgac 574 Query: 438 agcccttccttctctgctaa 457 |||||||||||||| ||||| Sbjct: 573 agcccttccttctcagctaa 554 Score = 50.1 bits (25), Expect = 0.010 Identities = 91/113 (80%) Strand = Plus / Minus Query: 582 tcaaaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtag 641 |||||||||||| |||| ||||||||||| || | || || || || ||||| | || Sbjct: 429 tcaaaagtttgcctcttagttatgtcatagacaaggagggcaccaactgctcctcgataa 370 Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 |||||||| || || || |||||||| ||||| || ||||| ||||||||||| Sbjct: 369 taagcactggtaatggctcggtacctttcttgccctgcagtgtcccatatctg 317
>emb|Z73952.1|LJRAB11D L.japonicus mRNA for small GTP-binding protein, RAB11D Length = 1319 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | |||||||||||| || || ||||||||||| || || |||||||| ||| Sbjct: 507 acagctcctcggtagtaagcactagtaatggcacggtacctttcctgaccagcagtgtcc 448 Query: 687 catatctgagctttaa 702 || |||||||| |||| Sbjct: 447 caaatctgagccttaa 432
>emb|Z73950.1|LJRAB11B L.japonicus mRNA for small GTP-binding protein, RAB11B Length = 1346 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 597 tttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgatt 656 ||||||||||||||||||| | |||||| | ||||| |||||||| |||||||| | Sbjct: 687 tttgttatgtcatacaccagcattgctcctaatgctcctctgtagtatgcacttgtcaca 628 Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagcttt 700 || | |||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 627 gccctgtacctttcttgaccagcagtgtcccagatctgggcttt 584
>ref|XM_475714.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 ||||||||||||||||| ||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct: 279 tgctcccacagctccccggtaataggcactagtgatagcacgatacctctcctggccggc 220 Query: 680 agtatcccatatctg 694 || ||||| ||||| Sbjct: 219 ggtgtcccaaatctg 205
>gb|BC062041.1| Rattus norvegicus RAB11B, member RAS oncogene family, mRNA (cDNA clone MGC:72373 IMAGE:5598168), complete cds Length = 1521 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 274 gcacggtagcgctcctggccagcagtatcccagatctgagccttgatggtcttgc 220
>gb|AF532626.1| Glycine max small GTP-binding protein mRNA, complete cds Length = 1263 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | |||||||||||| || || ||||||||||| || |||||||| || ||| Sbjct: 390 acagctcctcggtagtaagcactagtaatggcacggtacctttcctggccagcggtgtcc 331 Query: 687 catatctgagc 697 || |||||||| Sbjct: 330 caaatctgagc 320
>ref|NM_032617.2| Rattus norvegicus RAB11B, member RAS oncogene family (Rab11b), mRNA Length = 1521 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 274 gcacggtagcgctcctggccagcagtatcccagatctgagccttgatggtcttgc 220
>gb|AF286534.1|AF286534 Rattus norvegicus GTP-binding protein RAB11B (Rab11b) mRNA, complete cds Length = 1010 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 280 gcacggtagcgctcctggccagcagtatcccagatctgagccttgatggtcttgc 226
>dbj|AK061969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H05, full insert sequence Length = 968 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 ||||||||||||||||| ||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct: 331 tgctcccacagctccccggtaataggcactagtgatagcacgatacctctcctggccggc 272 Query: 680 agtatcccatatctg 694 || ||||| ||||| Sbjct: 271 ggtgtcccaaatctg 257
>dbj|AK060246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-H10, full insert sequence Length = 1344 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 ||||||||||||||||| ||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct: 322 tgctcccacagctccccggtaataggcactagtgatagcacgatacctctcctggccggc 263 Query: 680 agtatcccatatctg 694 || ||||| ||||| Sbjct: 262 ggtgtcccaaatctg 248
>gb|BC087498.1| Xenopus laevis hypothetical LOC496163, mRNA (cDNA clone MGC:99345 IMAGE:7204147), complete cds Length = 1043 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacgg 662 |||||||| || |||||||||||||| || |||||||| |||||| |||||| || | | Sbjct: 284 atgtcataaactaaaagtgctcccactgcacccctgtaataagcagatgtgatggctctg 225 Query: 663 tacctctcttggccagcagtatcccatatctgagc 697 || ||||| || ||||| || ||||| |||||||| Sbjct: 224 tatctctcctgtccagctgtgtcccagatctgagc 190
>gb|L29268.1|TOBNTRAA Nicotiana tabacum SR1 Nt-rab11c mRNA, complete cds Length = 927 Score = 61.9 bits (31), Expect = 3e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 600 gttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgca 659 ||||||||||| ||||| | ||||| ||||| |||||||| || |||||||||| || Sbjct: 397 gttatgtcataaaccaacatagctccaacagcgcccctgtaatatgcacttgtgacagct 338 Query: 660 cggtacctctcttggccagcagtatcccatatctgagctttaa 702 | || | ||||| |||||||||||||| ||||||||||||| Sbjct: 337 ctatatcgttcttgaccagcagtatcccagatctgagctttaa 295
>dbj|D01046.1| Rattus norvegicus mRNA for GTP binding protein, complete cds Length = 719 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 260 gcacggtagcgctcctggccagcagtatcccagatctgagccttgatggtcttgc 206
>ref|NM_117996.2| Arabidopsis thaliana GTP binding AT4G18800 mRNA, complete cds Length = 1151 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 ||||||||||| |||||||| ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 460 tagtaagcactagtgattgctcggtatctttcttgaccagcagtgtcccaaatctgggct 401 Query: 699 tt 700 || Sbjct: 400 tt 399
>gb|AY632360.1| Gossypium hirsutum BAC 106I22, complete sequence Length = 135862 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacct 667 ||||||||||||||||| | ||| || |||||||| |||||||||||||| Sbjct: 4430 agtgctcccacagctcctcggtaataggcacttgttattgcacggtacct 4381 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatg 704 ||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 3133 tacctttcttgaccagcagtgtcccaaatctgagctttaatg 3092
>gb|AY632359.1| Gossypium hirsutum BAC 155C17, complete sequence Length = 103930 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 618 agtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacct 667 ||||||||||||||||| | ||| || |||||||| |||||||||||||| Sbjct: 4462 agtgctcccacagctcctcggtaataggcacttgttattgcacggtacct 4413 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatg 704 ||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 3149 tacctttcttgaccagcagtgtcccaaatctgagctttaatg 3108
>gb|BT004936.1| Arabidopsis thaliana clone U20645 putative ras-related GTP binding protein (At4g18800) mRNA, complete cds Length = 676 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 ||||||||||| |||||||| ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 248 tagtaagcactagtgattgctcggtatctttcttgaccagcagtgtcccaaatctgggct 189 Query: 699 tt 700 || Sbjct: 188 tt 187
>gb|BT003901.1| Arabidopsis thaliana clone RAFL15-17-A17 (R20645) putative ras-related GTP binding protein (At4g18800) mRNA, complete cds Length = 1167 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagct 698 ||||||||||| |||||||| ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct: 460 tagtaagcactagtgattgctcggtatctttcttgaccagcagtgtcccaaatctgggct 401 Query: 699 tt 700 || Sbjct: 400 tt 399
>gb|AY110177.1| Zea mays CL8907_1 mRNA sequence Length = 659 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 |||||||||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 556 gcacttgtgattgcacggtacctctcctggccggcggtgtcccaaatctg 605
>dbj|D12546.1|PEAGTPBP07 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra7 Length = 1067 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | |||||||||||| || || || ||||| || ||||| |||||||| ||| Sbjct: 323 acagctcctcggtagtaagcactagtaatggctcggtatctttcttgaccagcagtgtcc 264 Query: 687 catatctgagctttaatg 704 || |||||||| |||||| Sbjct: 263 caaatctgagccttaatg 246
>dbj|D12541.1|PEAGTPBP02 Pisum sativum mRNA for GTP-binding protein, partial cds, clone:pra2 Length = 707 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 663 tacctctcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 214 tacctttcttggccagcagtatcccagatctgagcttt 177
>dbj|AP004977.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT12A10, TM0160, complete sequence Length = 74313 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggta 664 |||||||| || |||||||||||||||||||||||||| Sbjct: 10464 acagctcctctatagtaagcacttgtgattgcacggta 10501
>emb|Z73951.1|LJRAB11C L.japonicus mRNA for small GTP-binding protein, RAB11C Length = 1031 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 246 cagcaccctttctttgtgttaccggatgaatcggcaacattgatggtggttccttga 302 ||||| |||||||||||||| || || | ||| ||||||||||| |||||||||||| Sbjct: 838 cagcaacctttctttgtgttcccagaagtatcagcaacattgatagtggttccttga 782 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 500 atcagacttgtttccaaccatcattataacgatgttggagtcagcatggtcacggagctc 559 |||||| || |||||| ||||||| ||||| ||||| || || |||||||| | | || Sbjct: 581 atcagatttatttccagccatcatgataactatgttagaatccgcatggtccctcaattc 522 Query: 560 acgaagccacctattgatgttttcaaaagtttgcttctttgttatgtcatacaccaaaag 619 ||| |||||||| | || || ||||| |||||| |||| ||||||||||| || | || Sbjct: 521 acgcagccacctctggacattgtcaaaggtttgcctcttagttatgtcatatacaaggag 462 Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagc 679 || || |||||||| ||||| |||||||| || || || || || | |||||| || || Sbjct: 461 agcaccaacagctcctctgtaataagcactggtaatggcgcgatatcgctcttgacctgc 402 Query: 680 agtatcccatatctg 694 |||||||| ||||| Sbjct: 401 tgtatcccagatctg 387
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence Length = 127170 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||||||||||||||| ||||||||||| Sbjct: 17198 acctttcttggccagcagtatcccagatctgagcttt 17162
>emb|BX815293.1|CNS0ACTO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1700 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||||||||| ||||||||||| Sbjct: 246 acctctcttgaccagcagtatcccaaatctgagcttt 210
>gb|AC069472.1|AC069472 Arabidopsis thaliana chromosome 3 BAC F28J15 genomic sequence, complete sequence Length = 52211 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||||||||||||||| ||||||||||| Sbjct: 4890 acctttcttggccagcagtatcccaaatctgagcttt 4926
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete sequence Length = 85657 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||||||||||||||| ||||||||||| Sbjct: 1922 acctttcttggccagcagtatcccaaatctgagcttt 1886
>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 41039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||||||||| ||||||||||| Sbjct: 30495 acctctcttgaccagcagtatcccaaatctgagcttt 30531 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggta 664 |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 29511 acagctcctctgtaataagcgcttgtgattgctcggta 29548
>dbj|AP002063.2| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T23B7 Length = 40167 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||||||||||||||| ||||||||||| Sbjct: 34047 acctttcttggccagcagtatcccaaatctgagcttt 34083
>dbj|AB007911.1| Pisum sativum gene for PRA2, complete cds Length = 3441 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||||||||||||||| ||||||||||| Sbjct: 2569 acctttcttggccagcagtatcccagatctgagcttt 2533
>gb|L29271.1|TOBNTRAD Nicotiana tabacum SR1 Nt-rab11a mRNA, complete cds Length = 1031 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 582 tcaaaagtttgcttctttgttatgtcatacaccaaaagtgctcccacagctcccctgtag 641 ||||| |||||| |||||||||||||||| | | ||||| ||||| ||||| | ||| Sbjct: 524 tcaaatgtttgcctctttgttatgtcatagaaaaggagtgcacccactgctcctcgatag 465 Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 |||||||| || || || | |||||| ||||| || ||||| ||||||||||| Sbjct: 464 taagcactggtaatggctctgtacctttcttgtcctgcagtgtcccatatctg 412
>ref|NM_112051.1| Arabidopsis thaliana GTP binding AT3G12160 mRNA, complete cds Length = 669 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 |||||||||||||||||||| ||||||||||| Sbjct: 224 tcttggccagcagtatcccaaatctgagcttt 193
>ref|XM_470373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 910 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 561 acgatgttggagtcggcatggtcacggagctc 530
>gb|BT012793.1| Lycopersicon esculentum clone 113788F, mRNA sequence Length = 1209 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagcttt 700 ||||| ||||| || || ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 410 gcactagtgatggctcgatacctttcttgaccagcagtatcccaaatctgagcttt 355
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 8199 acgatgttggagtcggcatggtcacggagctc 8230
>emb|Z73956.1|LJRAB11H L.japonicus mRNA for small GTP-binding protein, RAB11H Length = 1204 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 645 gcacttgtgattgcacggtacctctcttggccagcagtatccca 688 |||||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 458 gcacttgttattgctcggtacctttcttgaccagcagtatccca 415
>emb|AJ879563.1| Plasmodium falciparum mRNA for Rab11B protein, strain NF54 Length = 690 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 |||||||| ||||||||||||||||||||||| Sbjct: 209 tcttggccggcagtatcccatatctgagcttt 178
>gb|DQ056590.1| Arabidopsis thaliana Ras-related GTP-binding family protein (At3g12160) mRNA, complete cds Length = 669 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 |||||||||||||||||||| ||||||||||| Sbjct: 224 tcttggccagcagtatcccaaatctgagcttt 193
>dbj|AK111499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K22, full insert sequence Length = 1146 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 562 acgatgttggagtcggcatggtcacggagctc 531
>dbj|AK104527.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A01, full insert sequence Length = 1074 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 487 acgatgttggagtcggcatggtcacggagctc 456
>dbj|AK104362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C06, full insert sequence Length = 1074 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 528 acgatgttggagtcagcatggtcacggagctc 559 |||||||||||||| ||||||||||||||||| Sbjct: 487 acgatgttggagtcggcatggtcacggagctc 456
>ref|NM_112368.2| Arabidopsis thaliana GTP binding AT3G15060 mRNA, complete cds Length = 886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 ||||| || ||||||||||| ||||| ||||||||||| || || ||||| |||||||| Sbjct: 305 tagtatgcgcttgtgattgctcggtatctctcttggccggcggtgtcccaaatctgagc 247
>ref|NM_128947.1| Arabidopsis thaliana GTP binding AT2G33870 mRNA, complete cds Length = 660 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagcttt 700 ||||| || ||||| || || ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 248 taagcgctcgtgatggctcgatacctttcttggccggcagtgtcccatatctgagcttt 190
>ref|NM_102623.1| Arabidopsis thaliana GTP binding AT1G28550 mRNA, complete cds Length = 657 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | ||| ||||| || ||||| || |||||||| |||||||| || |||||| Sbjct: 260 acagctcctcggtaataagcgctcgtgatggctcggtacctttcttggccggcggtatcc 201 Query: 687 catatctgagc 697 ||||| ||||| Sbjct: 200 catatttgagc 190
>gb|BC085270.1| Mus musculus RAB11B, member RAS oncogene family, mRNA (cDNA clone MGC:103195 IMAGE:6478784), complete cds Length = 1789 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 257 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 203
>gb|BC054753.1| Mus musculus RAB11B, member RAS oncogene family, mRNA (cDNA clone MGC:65651 IMAGE:6411651), complete cds Length = 1788 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 264 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 210
>gb|AY550123.1| Saussurea medusa GTP binding-protein-like mRNA, partial sequence Length = 667 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 640 agtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 |||| |||||||| ||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 292 agtatgcacttgtaattgcacggtaccgttcctggccagcagtgtcccaaatctg 238
>ref|NM_008997.1| Mus musculus RAB11B, member RAS oncogene family (Rab11b), mRNA Length = 1763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 259 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 205
>ref|XM_978657.1| PREDICTED: Mus musculus similar to Ras-related protein Rab-11B, transcript variant 2 (LOC669667), mRNA Length = 1618 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 193 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 139
>ref|XM_978704.1| PREDICTED: Mus musculus similar to Ras-related protein Rab-11B, transcript variant 3 (LOC669667), mRNA Length = 1750 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 325 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 271
>ref|XM_979126.1| PREDICTED: Mus musculus similar to Ras-related protein Rab-11B, transcript variant 2 (LOC665419), mRNA Length = 1618 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 193 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 139
>ref|XM_979168.1| PREDICTED: Mus musculus similar to Ras-related protein Rab-11B, transcript variant 3 (LOC665419), mRNA Length = 1750 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 325 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 271
>emb|Z73946.1|LJRAB8C L.japonicus mRNA for small GTP-binding protein, RAB8C Length = 988 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 668 ctcttggccagcagtatcccatatctg 694 ||||||||||||||||||||||||||| Sbjct: 378 ctcttggccagcagtatcccatatctg 352
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 112342 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 112396
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 143695 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 143641
>gb|DQ446594.1| Arabidopsis thaliana clone pENTR221-At2g33870 Ras-like GTP-binding protein (At2g33870) mRNA, complete cds Length = 657 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 642 taagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagcttt 700 ||||| || ||||| || || ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 245 taagcgctcgtgatggctcgatacctttcttggccggcagtgtcccatatctgagcttt 187
>emb|Z29593.1|VFGNRPR4 V.faba mRNA for guanine nucleotide regulatory protein (1226bp) Length = 1226 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagctttaa 702 |||||||||| |||||||| ||||||||||| ||||||| Sbjct: 577 acctctcttgcccagcagtgtcccatatctgcgctttaa 539
>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22 Length = 198131 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 141531 ccatcttcctcagctactgatctcaagtggtttagatcagctttgttcccagccatcatg 141590 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacct 571 || || |||||||| || |||||||| | || ||||| |||||||| Sbjct: 141591 atcacaatgttggaatctgcatggtctcttagttcacgtagccacct 141637
>emb|AL080252.2|ATT12G13 Arabidopsis thaliana DNA chromosome 4, BAC clone T12G13, partial sequence (ESSA project) Length = 91226 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 12628 ccatcttcctcagctactgatctcaagtggtttagatcagctttgttcccagccatcatg 12687 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacct 571 || || |||||||| || |||||||| | || ||||| |||||||| Sbjct: 12688 atcacaatgttggaatctgcatggtctcttagttcacgtagccacct 12734
>gb|DQ056467.1| Arabidopsis thaliana putative Ras-related GTP-binding protein (At1g28550) mRNA, complete cds Length = 657 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcc 686 |||||||| | ||| ||||| || ||||| || |||||||| |||||||| || |||||| Sbjct: 260 acagctcctcggtaataagcgctcgtgatggctcggtacctttcttggccggcggtatcc 201 Query: 687 catatctgagc 697 ||||| ||||| Sbjct: 200 catatttgagc 190
>gb|AC007178.6| Arabidopsis thaliana chromosome 2 clone F3L12 map mi320, complete sequence Length = 116149 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 15575 ccatcttcctcagctactgatctcaagtggtttagatcagctttgttcccagccatcatg 15634 Query: 525 ataacgatgttggagtcagcatggtcacggagctcacgaagccacct 571 || || |||||||| || |||||||| | || ||||| |||||||| Sbjct: 15635 atcacaatgttggaatccgcatggtctcttagttcacgtagccacct 15681
>dbj|AK134125.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830445A06 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1545 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 193 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 139
>dbj|AK148106.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370018B13 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1650 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 247 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 193
>dbj|AK147077.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920098B22 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1782 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 279 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 225
>dbj|AK146978.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920080M19 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1653 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 240 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 186
>dbj|AK148022.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270142I04 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1815 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 321 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 267
>dbj|AK146623.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920035M11 product:RAB11B, member RAS oncogene family, full insert sequence Length = 2411 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 260 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 206
>dbj|AK146460.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920006I23 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 260 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 206
>dbj|AK146452.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920003N23 product:RAB11B, member RAS oncogene family, full insert sequence Length = 1812 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 309 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 255
>ref|NG_001431.1| Mus musculus RAB11b, member RAS oncogene family, pseudogene 1 (Rab11b-ps1) on chromosome 1 Length = 655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 224 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 170
>gb|BT005565.1| Arabidopsis thaliana clone U51331 putative Ras family GTP-binding protein (At3g15060) mRNA, complete cds Length = 685 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 ||||| || ||||||||||| ||||| ||||||||||| || || ||||| |||||||| Sbjct: 248 tagtatgcgcttgtgattgctcggtatctctcttggccggcggtgtcccaaatctgagc 190
>dbj|AK195913.1| Mus musculus cDNA, clone:Y1G0120B01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066020, based on BLAT search Length = 184 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 104 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 50
>dbj|AK189626.1| Mus musculus cDNA, clone:Y0G0149M24, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066020, based on BLAT search Length = 296 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 215 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 161
>dbj|AK186595.1| Mus musculus cDNA, clone:Y0G0137P06, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066020, based on BLAT search Length = 295 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 215 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 161
>dbj|AK177220.1| Mus musculus cDNA, clone:Y0G0102A22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066020, based on BLAT search Length = 245 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 165 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 111
>dbj|AK118727.1| Arabidopsis thaliana At3g15060 mRNA for putative ras-related GTP-binding protein, complete cds, clone: RAFL21-06-O17 Length = 867 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 639 tagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 ||||| || ||||||||||| ||||| ||||||||||| || || ||||| |||||||| Sbjct: 305 tagtatgcgcttgtgattgctcggtatctctcttggccggcggtgtcccaaatctgagc 247
>gb|AF127663.1|AF127663 Mus musculus Rab11b pseudogene, partial sequence Length = 655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 224 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 170
>emb|CT030732.13| Mouse DNA sequence from clone RP23-27D5 on chromosome 17, complete sequence Length = 220163 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 61129 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 61183
>dbj|D12542.1|PEAGTPBP03 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra3 Length = 765 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 596 ctttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgat 655 |||||| ||||| || ||||| | |||||| ||||| ||||||||||| |||||||| | Sbjct: 305 ctttgtgatgtcgtaaaccaacattgctcctacagcacccctgtagtatgcacttgtaac 246 Query: 656 tgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttg 710 ||| | || | ||||| ||||| |||||||| |||||||| || | ||||||| Sbjct: 245 tgctctatatcgttcttgaccagcggtatcccagatctgagccttgacggtcttg 191
>gb|L26528.1|MUSRAB11B Mus musculus Rab11b mRNA, complete cds Length = 1763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 259 gcacggtagcgctcctggccagcagtgtcccagatctgagccttgatggtcttgc 205
>ref|NM_116888.1| Arabidopsis thaliana GTP binding AT4G08190 mRNA, complete cds Length = 384 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | ||||| |||| |||||| ||||||| ||||| ||| ||||||| Sbjct: 311 ccatcttcctcagctactgatctcaagtggtttagatcagctttgttcccagccatcatg 252 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 251 atcacaatgttggaatctgcatggtc 226
>ref|NM_128725.2| Arabidopsis thaliana GTP binding AT2G31680 mRNA, complete cds Length = 942 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagctttaa 702 ||||| |||||||||||||| ||||||||||||| Sbjct: 310 tcttgaccagcagtatcccaaatctgagctttaa 277
>ref|XM_413757.1| PREDICTED: Gallus gallus similar to GTPase Rab8b (LOC415371), mRNA Length = 856 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Minus Query: 597 tttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgatt 656 ||||||||||||||||||| | ||||| ||||| | ||||||||| |||||||| Sbjct: 344 tttgttatgtcatacaccagcataattcccatggctcctcggtagtaagctgttgtgatt 285 Query: 657 gcacggtacctctcttggccagcagtatcccatatctg 694 | ||| ||||||| ||||| || |||||||||||||| Sbjct: 284 gtgcggaacctctcctggcctgctgtatcccatatctg 247
>gb|BT009720.1| Arabidopsis thaliana At2g31680 gene, complete cds Length = 660 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagctttaa 702 ||||| |||||||||||||| ||||||||||||| Sbjct: 215 tcttgaccagcagtatcccaaatctgagctttaa 182
>gb|U78721.3| Arabidopsis thaliana chromosome 2 clone T1B8 map TEn5, complete sequence Length = 114144 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 663 tacctctcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 91080 tacctttcttggccggcagtgtcccatatctgagcttt 91117
>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete sequence Length = 79734 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 669 tcttggccagcagtatcccatatctgagctttaa 702 ||||| |||||||||||||| ||||||||||||| Sbjct: 63487 tcttgaccagcagtatcccaaatctgagctttaa 63520
>emb|BX950805.1| Gallus gallus finished cDNA, clone ChEST779e6 Length = 844 Score = 52.0 bits (26), Expect = 0.003 Identities = 80/98 (81%) Strand = Plus / Minus Query: 597 tttgttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgatt 656 ||||||||||||||||||| | ||||| ||||| | ||||||||| |||||||| Sbjct: 420 tttgttatgtcatacaccagcataattcccatggctcctcggtagtaagctgttgtgatt 361 Query: 657 gcacggtacctctcttggccagcagtatcccatatctg 694 | ||| ||||||| ||||| || |||||||||||||| Sbjct: 360 gtgcggaacctctcctggcctgctgtatcccatatctg 323
>dbj|AB015472.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAE1 Length = 54632 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 663 tacctctcttggccagcagtatcccatatctgagcttt 700 ||||| ||||||||||| |||||||| ||||||||||| Sbjct: 50176 tacctttcttggccagcggtatcccaaatctgagcttt 50139 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 621 gctcccacagctcccctgtagtaagcacttgtgattgc 658 ||||| |||||||| ||||| || |||||||||||||| Sbjct: 50380 gctcctacagctcctctgtaatatgcacttgtgattgc 50343
>ref|NM_111620.3| Arabidopsis thaliana GTP binding AT3G07410 mRNA, complete cds Length = 896 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 294 acctctcttgaccagcagtgtcccagatctgagcttt 258
>ref|NM_114550.2| Arabidopsis thaliana GTP binding AT3G46830 mRNA, complete cds Length = 1222 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 480 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 421 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 420 tgcagtgtcccagatctgggccttaatggtctt 388 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 632 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 573 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 572 atcacaatgttggaatctgcatggtc 547
>ref|NM_193120.1| Oryza sativa (japonica cultivar-group), mRNA Length = 663 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 668 ctcttggccagcagtatcccatatctgagcttt 700 |||||| |||||||| ||||||||||||||||| Sbjct: 222 ctcttgtccagcagtgtcccatatctgagcttt 190
>ref|NM_001016481.2| Xenopus tropicalis hypothetical protein LOC549235 (LOC549235), mRNA Length = 1115 Score = 50.1 bits (25), Expect = 0.010 Identities = 88/109 (80%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacgg 662 ||||||||||||| ||||| ||||||||||| | ||| || || ||||| || ||| Sbjct: 328 atgtcatacaccagcagtgcccccacagctcctcggtaatacgctgaagtgatggcccgg 269 Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 || | ||| || ||||| || ||||| ||||||||||||||||| |||| Sbjct: 268 tatcgctcctgtccagctgtgtcccagatctgagctttaatggttttgc 220
>gb|BC081187.1| Xenopus laevis MGC84419 protein, mRNA (cDNA clone MGC:84419 IMAGE:7019309), complete cds Length = 1109 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 651 gtgattgcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttg 710 ||||| || ||||| ||||| || || || || ||||| ||||||||||||||||||||| Sbjct: 248 gtgatggctcggtatctctcctgtccggccgtgtcccagatctgagctttaatggtcttg 189 Query: 711 c 711 | Sbjct: 188 c 188
>gb|BT013145.1| Lycopersicon esculentum clone 134140R, mRNA sequence Length = 1221 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 661 ggtacctctcttggccagcagtatcccatatct 693 |||||||||| || ||||||||||||||||||| Sbjct: 284 ggtacctctcctgcccagcagtatcccatatct 252
>emb|Z73954.1|LJRAB11F L.japonicus mRNA for small GTP-binding protein, RAB11F Length = 1123 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| |||||||| ||||| ||||||||||||||||| Sbjct: 332 acctttcttggccggcagtgtcccatatctgagcttt 296
>emb|Z73939.1|LJRAB5B L.japonicus mRNA for small GTP-binding protein, RAB5B Length = 1210 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 663 tacctctcttggccagcagtatcccatat 691 ||||||||||| ||||||||||||||||| Sbjct: 480 tacctctcttgaccagcagtatcccatat 452
>gb|AC009853.4|ATAC009853 Arabidopsis thaliana chromosome III BAC F21O3 genomic sequence, complete sequence Length = 90112 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 48013 acctctcttgaccagcagtgtcccagatctgagcttt 48049
>gb|DQ019037.1| Trichomonas vaginalis strain G3 small Rab GTPase Rab11b gene, complete cds Length = 636 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 675 ccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||||||||| ||||| |||||||| ||||||| Sbjct: 200 ccagcagtatcccaaatctgggctttaattgtcttgc 164
>gb|DQ141612.1| Trichomonas vaginalis isolate LX006 small Rab GTPase Rab11 (Rab11) mRNA, complete cds Length = 713 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 675 ccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||||||||| ||||| |||||||| ||||||| Sbjct: 215 ccagcagtatcccaaatctgggctttaattgtcttgc 179
>gb|AC138015.24| Medicago truncatula clone mth2-34m6, complete sequence Length = 126845 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagctttaatg 704 |||| ||||| |||||||||||||| |||||||| |||||| Sbjct: 73114 acctttcttgaccagcagtatcccaaatctgagccttaatg 73154 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacct 667 |||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 68317 acagctcctcggtagtaagcactagtgatggcacggtacct 68357
>gb|AY297922.1| Toxoplasma gondii Rab11 (rab11) mRNA, complete cds Length = 960 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagta 643 ||||| ||||| | ||||||||| ||||||||||||||||| Sbjct: 312 atgtcgtacacaagaagtgctccaacagctcccctgtagta 272
>emb|Y08904.1|ATRAB11 A.thaliana mRNA for Rab11 protein Length = 1200 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 437 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 378 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 377 tgcagtgtcccagatctgggccttaatggtctt 345 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 589 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 530 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 529 atcacaatgttggaatctgcatggtc 504
>gb|AY096545.1| Arabidopsis thaliana putative GTP-binding protein Rab11 (At3g46830) mRNA, complete cds Length = 685 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 267 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 208 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 207 tgcagtgtcccagatctgggccttaatggtctt 175
>gb|AY065380.1| Arabidopsis thaliana putative GTP-binding protein Rab11 (At3g46830) mRNA, complete cds Length = 1177 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 457 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 398 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 397 tgcagtgtcccagatctgggccttaatggtctt 365 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 609 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 550 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 549 atcacaatgttggaatctgcatggtc 524
>emb|X64941.1|NPGTPBPM N.plumbaginifolia mRNA for small GTP binding protein Length = 870 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 661 ggtacctctcttggccagcagtatcccatatct 693 |||||||||| || ||||||||||||||||||| Sbjct: 217 ggtacctctcctgtccagcagtatcccatatct 185
>emb|AL096859.2|ATT6H20 Arabidopsis thaliana DNA chromosome 3, BAC clone T6H20 Length = 98461 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 47228 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 47169 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 47168 tgcagtgtcccagatctgggccttaatggtctt 47136 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 47380 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 47321 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 47320 atcacaatgttggaatctgcatggtc 47295
>ref|NM_214770.1| Danio rerio zgc:55760 (zgc:55760), mRNA Length = 1814 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gtatcccatatctgagctttaatggtctt 709 |||||||| |||||||||||||||||||| Sbjct: 228 gtatcccagatctgagctttaatggtctt 200
>gb|AC143337.27| Medicago truncatula clone mth2-35d19, complete sequence Length = 118139 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 627 acagctcccctgtagtaagcacttgtgattgcacggtacct 667 |||||||| | |||||||||||| ||||| ||||||||||| Sbjct: 66604 acagctcctcggtagtaagcactagtgatggcacggtacct 66564 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagctttaatg 704 |||| ||||| |||||||||||||| |||||||| |||||| Sbjct: 61807 acctttcttgaccagcagtatcccaaatctgagccttaatg 61767
>gb|AY072444.1| Arabidopsis thaliana putative GTP-binding protein (At3g07410) mRNA, complete cds Length = 895 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 294 acctctcttgaccagcagtgtcccagatctgagcttt 258
>gb|BC048889.1| Danio rerio zgc:55760, mRNA (cDNA clone MGC:55760 IMAGE:3816634), complete cds Length = 1814 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gtatcccatatctgagctttaatggtctt 709 |||||||| |||||||||||||||||||| Sbjct: 228 gtatcccagatctgagctttaatggtctt 200
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 668 ctcttggccagcagtatcccatatctgagcttt 700 |||||| |||||||| ||||||||||||||||| Sbjct: 26269407 ctcttgtccagcagtgtcccatatctgagcttt 26269375
>emb|BX822900.1|CNS0A74N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1091 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 389 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 330 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 329 tgcagtgtcccagatctgggccttaatggtctt 297 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 541 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 482 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 481 atcacaatgttggaatctgcatggtc 456
>emb|BX823307.1|CNS0A6J6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 796 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 284 acctctcttgaccagcagtgtcccagatctgagcttt 248
>emb|BX825812.1|CNS0A6BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 714 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 203 acctctcttgaccagcagtgtcccagatctgagcttt 167
>gb|AY087450.1| Arabidopsis thaliana clone 35596 mRNA, complete sequence Length = 1200 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 617 aagtgctcccacagctcccctgtagtaagcacttgtgattgcacggtacctctcttggcc 676 |||||| ||||| || || ||||| || || |||||||| || | ||||||||| || || Sbjct: 481 aagtgcacccactgcgcctctgtaatacgcgcttgtgatcgccctgtacctctcctgacc 422 Query: 677 agcagtatcccatatctgagctttaatggtctt 709 ||||| ||||| ||||| || ||||||||||| Sbjct: 421 tgcagtgtcccagatctgggccttaatggtctt 389 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 465 ccatcttcctctgggactgacctcaggtggttgagatcagacttgtttccaaccatcatt 524 ||||||||||| | || || |||| |||||| ||||| || ||||| ||| ||||||| Sbjct: 633 ccatcttcctcagcaacggatctcaagtggttcagatcggatttgttcccagccatcatg 574 Query: 525 ataacgatgttggagtcagcatggtc 550 || || |||||||| || |||||||| Sbjct: 573 atcacaatgttggaatctgcatggtc 548
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 668 ctcttggccagcagtatcccatatctgagcttt 700 |||||| |||||||| ||||||||||||||||| Sbjct: 44035 ctcttgtccagcagtgtcccatatctgagcttt 44003
>dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19 Length = 86722 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||| ||||| |||||||||||||| ||||||||||| Sbjct: 63586 acctttcttgaccagcagtatcccaaatctgagcttt 63550
>dbj|AK102491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094O19, full insert sequence Length = 1310 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 668 ctcttggccagcagtatcccatatctgagcttt 700 |||||| |||||||| ||||||||||||||||| Sbjct: 535 ctcttgtccagcagtgtcccatatctgagcttt 503
>gb|BT002173.1| Arabidopsis thaliana putative GTP-binding protein (At3g07410) mRNA, complete cds Length = 777 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagcttt 700 |||||||||| |||||||| ||||| ||||||||||| Sbjct: 220 acctctcttgaccagcagtgtcccagatctgagcttt 184
>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22, complete sequence Length = 206348 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 681 gtatcccatatctgagctttaatggtctt 709 |||||||| |||||||||||||||||||| Sbjct: 59946 gtatcccagatctgagctttaatggtctt 59974
>emb|CR760887.2| Xenopus tropicalis finished cDNA, clone TTpA022f13 Length = 1115 Score = 50.1 bits (25), Expect = 0.010 Identities = 88/109 (80%) Strand = Plus / Minus Query: 603 atgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgcacgg 662 ||||||||||||| ||||| ||||||||||| | ||| || || ||||| || ||| Sbjct: 328 atgtcatacaccagcagtgcccccacagctcctcggtaatacgctgaagtgatggcccgg 269 Query: 663 tacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 || | ||| || ||||| || ||||| ||||||||||||||||| |||| Sbjct: 268 tatcgctcctgtccagctgtgtcccagatctgagctttaatggttttgc 220
>gb|M38392.1|DYGORA3 Discopyge ommata GTP-binding protein (ora3) mRNA, complete cds Length = 900 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 681 gtatcccatatctgagctttaatggtctt 709 |||||||| |||||||||||||||||||| Sbjct: 272 gtatcccagatctgagctttaatggtctt 244
>ref|NM_124170.2| Arabidopsis thaliana SMG1 (SMALL MOLECULAR WEIGHT G-PROTEIN 1); GTP binding AT5G47960 (SMG1) mRNA, complete cds Length = 881 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 284 tcttgaccagcagtgtcccatatctgagcttt 253
>ref|NM_124171.3| Arabidopsis thaliana FAD binding / oxidoreductase AT5G47970 mRNA, complete cds Length = 2064 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 48 tcttgaccagcagtgtcccatatctgagcttt 79
>ref|NM_196819.1| Oryza sativa (japonica cultivar-group) putative GTP-binding protein (OSJNBa0018F16.14), mRNA Length = 669 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 ||||||| |||||||||||||||||||| Sbjct: 253 acctctcctggccagcagtatcccatat 226
>gb|BC074589.1| Xenopus tropicalis RAB3A, member RAS oncogene family, mRNA (cDNA clone MGC:69316 IMAGE:5308773), complete cds Length = 1602 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 649 ttgtgattgcacggtacctctcttggccagcagtatccca 688 ||||||||| |||||||||||||||||||| || ||||| Sbjct: 384 ttgtgattgtgcggtacctctcttggccagctgtgtccca 345
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 620 tgctcccacagctcccctgtagtaagcacttgtgattgcacggtacct 667 ||||||||||||||||| ||| || ||||| ||||| ||||| ||||| Sbjct: 65795 tgctcccacagctccccggtaataggcactagtgatagcacgatacct 65842 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 672 tggccagcagtatcccatatctg 694 ||||||||||||||||||||||| Sbjct: 62122 tggccagcagtatcccatatctg 62100
>emb|CT030489.1| Xenopus tropicalis finished cDNA, clone TGas034k08 Length = 1187 Score = 48.1 bits (24), Expect = 0.040 Identities = 37/40 (92%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 666 ctctcttggccagcagtatcccatatct-gagctttaatg 704 ||||||||||||||||| ||||| |||| ||||||||||| Sbjct: 472 ctctcttggccagcagtgtcccagatctggagctttaatg 433
>emb|CT025365.2| Xenopus tropicalis finished cDNA, clone TNeu138i16 Length = 1562 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 649 ttgtgattgcacggtacctctcttggccagcagtatccca 688 ||||||||| |||||||||||||||||||| || ||||| Sbjct: 340 ttgtgattgtgcggtacctctcttggccagctgtgtccca 301
>emb|CR933469.1| Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 663 tacctctcttggccagcagtatcccata 690 |||||||||| ||||||||||||||||| Sbjct: 1315 tacctctcttagccagcagtatcccata 1342
>emb|Z73958.1|LJRAB11J L.japonicus mRNA for small GTP-binding protein, RAB11J Length = 1036 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagctttaat 703 |||||||||| ||||| || ||||||||||| |||||||| Sbjct: 485 acctctcttgcccagctgtgtcccatatctgcgctttaat 446
>ref|NM_021252.3| Homo sapiens RAB18, member RAS oncogene family (RAB18), mRNA Length = 2809 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 258 acctctcttgaccagcagtatcccatat 231
>gb|BT009840.1| Homo sapiens RAB18, member RAS oncogene family mRNA, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AF087860.1| Homo sapiens rab18 mRNA, complete cds Length = 963 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 262 acctctcttgaccagcagtatcccatat 235
>gb|AY072094.1| Arabidopsis thaliana unknown protein (At5g47970) mRNA, complete cds Length = 2080 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 49 tcttgaccagcagtgtcccatatctgagcttt 80
>ref|NM_001005621.1| Xenopus tropicalis RAB3A, member RAS oncogene family (rab3a), mRNA Length = 1602 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 649 ttgtgattgcacggtacctctcttggccagcagtatccca 688 ||||||||| |||||||||||||||||||| || ||||| Sbjct: 384 ttgtgattgtgcggtacctctcttggccagctgtgtccca 345
>gb|BC029350.1| Homo sapiens RAB18, member RAS oncogene family, mRNA (cDNA clone MGC:26838 IMAGE:4819866), complete cds Length = 2833 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 274 acctctcttgaccagcagtatcccatat 247
>emb|AL136734.1|HSM801702 Homo sapiens mRNA; cDNA DKFZp434N0410 (from clone DKFZp434N0410) Length = 2466 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 257 acctctcttgaccagcagtatcccatat 230
>gb|BC015014.2| Homo sapiens RAB18, member RAS oncogene family, mRNA (cDNA clone MGC:8766 IMAGE:3922029), complete cds Length = 2809 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 258 acctctcttgaccagcagtatcccatat 231
>emb|CR860884.1| Pongo pygmaeus mRNA; cDNA DKFZp469D2320 (from clone DKFZp469D2320) Length = 2821 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 281 acctctcttgaccagcagtatcccatat 254
>emb|CR599854.1| full-length cDNA clone CS0DK009YI07 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1745 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 251 acctctcttgaccagcagtatcccatat 224
>emb|CR590751.1| full-length cDNA clone CS0DN005YM15 of Adult brain of Homo sapiens (human) Length = 1117 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 246 acctctcttgaccagcagtatcccatat 219
>dbj|AK001555.1| Homo sapiens cDNA FLJ10693 fis, clone NT2RP3000366, highly similar to RAS-RELATED PROTEIN RAB-18 Length = 2728 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AF498950.1| Homo sapiens small GTP binding protein RAB18 (RAB18) mRNA, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete sequence Length = 106949 Score = 48.1 bits (24), Expect = 0.040 Identities = 51/60 (85%) Strand = Plus / Plus Query: 414 agtgctgaggtctcgaggaaggatagcccttccttctctgctaatgcctggccatcttcc 473 |||||||| ||||| ||||| | ||||||||||||||||| ||| ||| | |||||||| Sbjct: 89874 agtgctgaagtctcaaggaaaaaaagcccttccttctctgcaaattccttggcatcttcc 89933
>gb|BT024842.1| Arabidopsis thaliana At5g47960 gene, complete cds Length = 672 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 224 tcttgaccagcagtgtcccatatctgagcttt 193
>emb|CR533455.1| Homo sapiens full open reading frame cDNA clone RZPDo834E1016D for gene RAB18, RAB18, member RAS oncogene family; complete cds, incl. stopcodon Length = 783 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AY007366.1| Lycopersicon esculentum tospovirus resistance protein A (Sw5-a) and tospovirus resistance protein B (Sw5-b) genes, complete cds Length = 35250 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 675 ccagcagtatcccatatctgagctttaa 702 |||||||||||||| ||||||||||||| Sbjct: 8511 ccagcagtatcccaaatctgagctttaa 8538
>gb|AF136974.1|AF136974 Homo sapiens ras-related protein 18 mRNA, complete cds Length = 1196 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 318 acctctcttgaccagcagtatcccatat 291
>gb|AF218121.1|AF218121 Arabidopsis thaliana small molecular weight g-protein (smg1) mRNA, complete cds Length = 817 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 284 tcttgaccagcagtgtcccatatctgagcttt 253
>dbj|AK188436.1| Mus musculus cDNA, clone:Y0G0145D08, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066020, based on BLAT search Length = 295 Score = 48.1 bits (24), Expect = 0.040 Identities = 47/55 (85%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||| | ||||| |||||||| || |||||||||| Sbjct: 215 gcacggtagcgctcctggccagcantgtcccagatctgagccttgatggtcttgc 161
>gb|AY974574.1| Mus musculus RAB11B member RAS oncogene family-like (Rab11b) mRNA, partial sequence Length = 532 Score = 48.1 bits (24), Expect = 0.040 Identities = 47/55 (85%) Strand = Plus / Minus Query: 657 gcacggtacctctcttggccagcagtatcccatatctgagctttaatggtcttgc 711 |||||||| | ||| ||||||||||| ||||| |||||||| | |||||||||| Sbjct: 224 gcacggtagcgctcctggccagcagtgtcccagatctgagcctngatggtcttgc 170
>gb|AF137372.1|AF137372 Homo sapiens ras-related protein RAB18 mRNA, complete cds Length = 1104 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AY889008.1| Synthetic construct Homo sapiens clone FLH109947.01X RAB18 member RAS oncogene family (RAB18) mRNA, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>gb|AY889007.1| Synthetic construct Homo sapiens clone FLH109946.01X RAB18 member RAS oncogene family (RAB18) mRNA, complete cds Length = 621 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 |||||||||| ||||||||||||||||| Sbjct: 208 acctctcttgaccagcagtatcccatat 181
>dbj|AB024025.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16F13 Length = 19742 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||| ||||||||||||||||| Sbjct: 16980 tcttgaccagcagtgtcccatatctgagcttt 17011
>dbj|AK120316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055N09, full insert sequence Length = 673 Score = 48.1 bits (24), Expect = 0.040 Identities = 51/60 (85%) Strand = Plus / Minus Query: 638 gtagtaagcacttgtgattgcacggtacctctcttggccagcagtatcccatatctgagc 697 |||||||||||||||||| ||||| || ||||| || || || || ||||| |||||||| Sbjct: 339 gtagtaagcacttgtgatggcacgatatctctcctgtcctgctgtgtcccagatctgagc 280
>dbj|AK102843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109P10, full insert sequence Length = 1101 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatat 691 ||||||| |||||||||||||||||||| Sbjct: 435 acctctcctggccagcagtatcccatat 408
>gb|U40219.1|PCU40219 Pennisetum ciliare possible apospory-associated protein mRNA, complete cds Length = 941 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctga 695 ||||||| || ||||||||||||||||||||| Sbjct: 301 acctctcctgtccagcagtatcccatatctga 270
>gb|L29272.1|TOBNTRAE Nicotiana tabacum SR1 Nt-rab11e mRNA, 3' end Length = 843 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctgagcttt 700 ||||| |||||||||||||| ||||||||||| Sbjct: 191 tcttgaccagcagtatcccaaatctgagcttt 160
>gb|AC152109.1| Pichia stipitis clone JGIAHYZ-13H12, complete sequence Length = 40187 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 668 ctcttggccagcagtatcccatatctg 694 ||||||||||||||||||||| ||||| Sbjct: 34668 ctcttggccagcagtatcccagatctg 34694
>gb|BC074481.1| Xenopus laevis MGC84786 protein, mRNA (cDNA clone MGC:84786 IMAGE:6951907), complete cds Length = 3722 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 630 gctcccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatccca 688 ||||| ||||| |||||| ||||||| | ||||||||||| || ||||| |||||||| Sbjct: 344 gctcctctgtaataagcagttgtgatggtccggtacctctcctgtccagctgtatccca 286
>ref|XM_589241.2| PREDICTED: Bos taurus similar to Ras-related protein Rab-5A, transcript variant 1 (LOC539764), mRNA Length = 2076 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 661 ggtacctctcttggccagcagtatcccatat 691 |||||| |||||||||||| ||||||||||| Sbjct: 421 ggtaccgctcttggccagccgtatcccatat 391
>ref|XM_864602.1| PREDICTED: Bos taurus similar to Ras-related protein Rab-5A, transcript variant 2 (LOC539764), mRNA Length = 2097 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 661 ggtacctctcttggccagcagtatcccatat 691 |||||| |||||||||||| ||||||||||| Sbjct: 442 ggtaccgctcttggccagccgtatcccatat 412
>gb|DQ443175.1| Bombyx mori Rab7 mRNA, complete cds Length = 1910 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatat 691 ||||||||||||||||||||||| Sbjct: 285 tcttggccagcagtatcccatat 263
>gb|DQ443136.1| Bombyx mori small GTP binding protein RAB8 mRNA, complete cds Length = 1198 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 649 ttgtgattgcacggtacctctcttggccagcagtatcccatat 691 |||| |||| |||| | |||||||| ||||||||||||||||| Sbjct: 317 ttgttattgtacggaatctctcttgaccagcagtatcccatat 275
>ref|XM_799769.1| Trypanosoma cruzi strain CL Brener ras-related protein Rab21 (Tc00.1047053511191.19) partial mRNA Length = 699 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatat 691 ||||||||||||||||||||||| Sbjct: 206 tcttggccagcagtatcccatat 184
>emb|Z73936.1|LJRAB1Y L.japonicus mRNA for small GTP-binding protein, RAB1Y Length = 924 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 666 ctctcttggccagcagtatccca 688 ||||||||||||||||||||||| Sbjct: 214 ctctcttggccagcagtatccca 192
>ref|XM_807535.1| Trypanosoma cruzi strain CL Brener ras-related protein Rab21 (Tc00.1047053506619.49) partial mRNA Length = 699 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatat 691 ||||||||||||||||||||||| Sbjct: 206 tcttggccagcagtatcccatat 184
>gb|AY896258.1| Trichomonas vaginalis strain G3 small Rab GTPase RabB2 gene, complete cds Length = 600 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctga 695 |||||||| |||||||||||||||||| Sbjct: 215 tcttggcctgcagtatcccatatctga 189
>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence Length = 129414 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 664 acctctcttggccagcagtatcccatatctgagctttaa 702 |||| ||||| |||||||||||||| |||||||| |||| Sbjct: 72979 acctttcttgaccagcagtatcccaaatctgagccttaa 73017 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 627 acagctcccctgtagtaagcacttgtgattgcacg 661 |||||||| | |||||| ||||||||||||||||| Sbjct: 71725 acagctccacggtagtatgcacttgtgattgcacg 71759
>ref|XM_791270.1| PREDICTED: Strongylocentrotus purpuratus rab7 GTPase homolog SUrab7 (rab7), mRNA Length = 835 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctg 694 |||||||||| ||||| |||||||||||||| Sbjct: 349 acctctcttgaccagcggtatcccatatctg 319
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 634 ccctgtagtaagcacttgtgattgcacggtacctctcttggccagcagtatccca 688 |||||||||| || | |||||||| ||||| | |||||||||||||||||||| Sbjct: 50800 ccctgtagtatgctgtggtgattgcgcggtaacgttcttggccagcagtatccca 50854 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 669 tcttggccagcagtatccca 688 |||||||||||||||||||| Sbjct: 936708 tcttggccagcagtatccca 936689
>emb|AJ437656.1|SCH437656 Simmondsia chinensis mRNA for Rab-related small GTP-binding protein (rab gene) Length = 837 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 661 ggtacctctcttggccagcagtatcccatat 691 ||||||||||||| ||||| ||||||||||| Sbjct: 247 ggtacctctcttgaccagccgtatcccatat 217
>dbj|AK223153.1| Homo sapiens mRNA for RAB18, member RAS oncogene family variant, clone: LNG03005 Length = 1769 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccata 690 |||||||||| |||||||||||||||| Sbjct: 231 acctctcttgaccagcagtatcccata 205
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagctttaa 702 ||||||| || |||||||| ||||| ||||||||||||| Sbjct: 12011 acctctcctgaccagcagtgtcccaaatctgagctttaa 11973
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctgagctttaa 702 ||||||| || |||||||| ||||| ||||||||||||| Sbjct: 58708 acctctcctgaccagcagtgtcccaaatctgagctttaa 58670
>gb|AY107436.1| Zea mays PCO103364 mRNA sequence Length = 1034 Score = 46.1 bits (23), Expect = 0.16 Identities = 77/95 (81%) Strand = Plus / Minus Query: 600 gttatgtcatacaccaaaagtgctcccacagctcccctgtagtaagcacttgtgattgca 659 ||||||||||| || || | ||||| || || ||||||||||| |||||||| | ||| Sbjct: 458 gttatgtcatatactaacatagctccaactgcacccctgtagtaggcacttgttactgct 399 Query: 660 cggtacctctcttggccagcagtatcccatatctg 694 |||||||| || ||||| || || ||||| ||||| Sbjct: 398 cggtacctttcctggcctgcggtgtcccagatctg 364
>gb|U82219.1|PAU82219 Prunus armeniaca Rab7 GTP binding protein mRNA, complete cds Length = 987 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 664 acctctcttggccagcagtatcccatatctg 694 |||||||||| |||||||||||||| ||||| Sbjct: 302 acctctcttgcccagcagtatcccaaatctg 272
>ref|NM_124901.3| Arabidopsis thaliana RAN3; GTP binding AT5G55190 (RAN3) mRNA, complete cds Length = 984 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 667 tctcttggccagcagtatccca 688 |||||||||||||||||||||| Sbjct: 329 tctcttggccagcagtatccca 308
>gb|BC106308.1| Xenopus laevis similar to RAB3D, member RAS oncogene family, mRNA (cDNA clone MGC:130815 IMAGE:7983660), complete cds Length = 1582 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 649 ttgtgattgcacggtacctctcttggccagcagtatcccatatctg 694 ||||||||| |||||||||||||| ||||| || ||||| ||||| Sbjct: 357 ttgtgattgtgcggtacctctcttgaccagctgtgtcccagatctg 312
>ref|XM_956806.1| Neurospora crassa OR74A hypothetical protein (NCU08271.1) partial mRNA Length = 1437 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctg 694 |||||||||||||||||||| ||||| Sbjct: 206 tcttggccagcagtatcccaaatctg 181
>ref|XM_328976.1| Neurospora crassa OR74A hypothetical protein (NCU08271.1) partial mRNA Length = 1437 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 669 tcttggccagcagtatcccatatctg 694 |||||||||||||||||||| ||||| Sbjct: 206 tcttggccagcagtatcccaaatctg 181 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,841,819 Number of Sequences: 3902068 Number of extensions: 6841819 Number of successful extensions: 157806 Number of sequences better than 10.0: 479 Number of HSP's better than 10.0 without gapping: 479 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 156623 Number of HSP's gapped (non-prelim): 1181 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)