ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19f14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 757 bits (382), Expect = 0.0 Identities = 440/461 (95%), Gaps = 2/461 (0%) Strand = Plus / Plus Query: 14 ttagtgcaattgttntatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctc 73 ||||| |||||||| |||||||||||| || |||||||||||||||||||||| Sbjct: 79894 ttagtacaattgttatatgacacatgcttttttttatggggaaactacgtcctcgagctc 79953 Query: 74 gaggtctgaatttcttcataatagtactcctactgacttcggctttagtaatgaataaat 133 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79954 gaggtctgaatttcttcataatagtactcctactgacttcggctttagtaataaataaat 80013 Query: 134 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 193 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 80014 tcgctttgtcgaaatccctataatgagtagcatttgcggctgccgaataaaccaacttta 80073 Query: 194 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80074 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 80133 Query: 254 aacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatagggatacgtt 313 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80134 aacgccagcgaatctcgtcaagaactctttgtgctttgaaaacagacatagggatacgtt 80193 Query: 314 tttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaactttccttgcga 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80194 tttgtgctttgaaaactctctcgaacttaagtagacgatcggttggaactttccttgcga 80253 Query: 374 gtttccttancccacttttcttcttctttatcctagggatatactttactagtngtgaaa 433 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 80254 gtttccttagcccacttttcttcttctttatcctagggatatactttactagtt-tgaaa 80312 Query: 434 cttggcataaataaggnttattccccnnctacctttacttt 474 |||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 80313 cttgtcataaataagg-ttattccccgcctacctttacttt 80352
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 720 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 661 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 660 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 601 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 600 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 541 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 540 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 481 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 480 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 421 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 420 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 361 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 360 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 319
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 720 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 661 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 660 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 601 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 600 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 541 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 540 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 481 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 480 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 421 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 420 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 361 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 360 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 319
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80196 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 80255 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 80256 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 80315 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 80316 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 80375 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 80376 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 80435 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 80436 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 80495 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 80496 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 80555 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 80556 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 80597
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80196 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 80255 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 80256 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 80315 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 80316 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 80375 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 80376 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 80435 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 80436 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 80495 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 80496 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 80555 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 80556 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 80597
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80139 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 80198 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 80199 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 80258 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 80259 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 80318 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 80319 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 80378 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 80379 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 80438 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 80439 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 80498 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 80499 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 80540
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80184 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 80243 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 80244 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 80303 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 80304 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 80363 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 80364 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 80423 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 80424 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 80483 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 80484 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 80543 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 80544 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 80585
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 70558 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 70499 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 70498 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 70439 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 70438 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 70379 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 70378 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 70319 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 70318 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 70259 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 70258 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 70199 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 70198 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 70157
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9212619 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 9212678 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 9212679 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 9212738 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 9212739 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 9212798 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 9212799 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 9212858 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 9212859 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 9212918 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 9212919 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 9212978 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 9212979 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 9213020 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9189485 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 9189426 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 9189425 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 9189366 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 9189365 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 9189306 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 9189305 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 9189246 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 9189245 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 9189186 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 9189185 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 9189126 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 9189125 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 9189084 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9112532 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 9112473 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 9112472 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 9112413 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 9112412 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 9112353 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 9112352 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 9112293 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 9112292 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 9112233 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 9112232 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 9112173 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 9112172 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 9112131 Score = 141 bits (71), Expect = 2e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 179 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 238 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426 Query: 239 cagtttcctcgtagtaacgccaccgaatctc 269 |||||| |||||||||||||| |||||||| Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 tgtcgaaatccctataatgagttgcatttg 169 ||||||||||| |||||||||| ||||||| Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9256875 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 9256816 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 9256815 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 9256756 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 9256755 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 9256696 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 9256695 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 9256636 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 9256635 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 9256576 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 9256575 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 9256516 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 9256515 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 9256474
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 68088 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 68029 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 68028 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 67969 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 67968 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 67909 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 67908 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 67849 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 67848 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 67789 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 67788 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 67729 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 67728 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 67687
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 551 bits (278), Expect = e-154 Identities = 374/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80136 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 80195 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 80196 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 80255 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 80256 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 80315 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 80316 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 80375 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 80376 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 80435 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 80436 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 80495 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 80496 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 80537
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 627 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 568 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 567 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 508 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 507 ccgaataaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatca 448 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 447 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 388 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 387 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 328 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 327 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 268 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 267 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 226
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14453504 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 14453445 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 14453444 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 14453385 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 14453384 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 14453325 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 14453324 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 14453265 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||| | Sbjct: 14453264 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcag 14453205 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 14453204 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 14453145 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 14453144 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 14453103 Score = 492 bits (248), Expect = e-136 Identities = 367/404 (90%), Gaps = 5/404 (1%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||| Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| |||||||||| ||||||||| Sbjct: 11893354 actttaccagtt-tgaaacttgttataaataagg-ttattcccc 11893313
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27925669 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 27925728 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 27925729 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 27925788 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 27925789 ccgaataaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatca 27925848 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 27925849 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 27925908 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 27925909 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 27925968 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 27925969 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 27926028 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 27926029 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 27926070 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 124 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 183 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825 Query: 184 accaact 190 ||||||| Sbjct: 10159824 accaact 10159818 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 217 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 276 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750 Query: 277 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 329 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 89027 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 89086 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 89087 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 89146 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 89147 ccgaataaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatca 89206 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 89207 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 89266 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 89267 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 89326 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 89327 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 89386 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 89387 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 89428
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15003 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 15062 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 15063 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 15122 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| Sbjct: 15123 ccgaataaaccaactttaagataggataagatgctcgataaggcatgaggttcaatatca 15182 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 15183 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 15242 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 15243 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 15302 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 15303 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 15362 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 15363 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 15404
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 145307 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 145248 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 145247 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 145188 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 145187 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 145128 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 145127 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 145068 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||| | Sbjct: 145067 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcag 145008 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 145007 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 144948 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 144947 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 144906
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 53069 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 53010 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 53009 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 52950 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 52949 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 52890 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 52889 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 52830 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||| | Sbjct: 52829 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcag 52770 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 52769 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggtat 52710 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 52709 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 52668
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 543 bits (274), Expect = e-151 Identities = 373/404 (92%), Gaps = 2/404 (0%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 720 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 661 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 660 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 601 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 600 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 541 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 540 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 481 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 480 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcgg 421 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| ||||||||| ||||||||||| ||| Sbjct: 420 ttggtacttttcttgcgagtttccttagcccactcttcttcttccttatcctaggggtat 361 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 360 actttaccagtt-tgaaacttgtcataaataagg-ttattcccc 319
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 537 bits (271), Expect = e-149 Identities = 374/405 (92%), Gaps = 3/405 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 78377 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 78436 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 78437 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 78496 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 78497 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 78556 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaa 294 |||||||||| |||||||||||||| |||||||| || ||||||| ||||| |||||||| Sbjct: 78557 taacagtttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaa 78616 Query: 295 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 354 || ||||| |||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 78617 acggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcg 78676 Query: 355 gttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggata 414 ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 78677 gttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggta 78736 Query: 415 tactttactagtngtgaaacttggcataaataaggnttattcccc 459 |||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 78737 tactttaccagtt-tgaaacttgtcataaataagg-ttattcccc 78779
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 537 bits (271), Expect = e-149 Identities = 374/405 (92%), Gaps = 3/405 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12441 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 12500 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 12501 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 12560 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 12561 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 12620 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaa 294 |||||||||| |||||||||||||| |||||||| || ||||||| ||||| |||||||| Sbjct: 12621 taacagtttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaa 12680 Query: 295 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 354 || ||||| |||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 12681 acggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcg 12740 Query: 355 gttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggata 414 ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 12741 gttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggta 12800 Query: 415 tactttactagtngtgaaacttggcataaataaggnttattcccc 459 |||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 12801 tactttaccagtt-tgaaacttgtcataaataagg-ttattcccc 12843
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 537 bits (271), Expect = e-149 Identities = 374/405 (92%), Gaps = 3/405 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10371985 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 10372044 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 10372045 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 10372104 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 10372105 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 10372164 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaa 294 |||||||||| |||||||||||||| |||||||| || ||||||| ||||| |||||||| Sbjct: 10372165 taacagtttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaa 10372224 Query: 295 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 354 || ||||| |||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 10372225 acggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcg 10372284 Query: 355 gttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggata 414 ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 10372285 gttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggta 10372344 Query: 415 tactttactagtngtgaaacttggcataaataaggnttattcccc 459 |||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 10372345 tactttaccagtt-tgaaacttgtcataaataagg-ttattcccc 10372387
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 537 bits (271), Expect = e-149 Identities = 374/405 (92%), Gaps = 3/405 (0%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10378024 aactacgtcctcgagcccgaggtctgaatttattcataatagtactcctactgacttcgg 10378083 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| |||| Sbjct: 10378084 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgctg 10378143 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 10378144 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 10378203 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactc-tttgtgctttgaaa 294 |||||||||| |||||||||||||| |||||||| || ||||||| ||||| |||||||| Sbjct: 10378204 taacagtttcttcgtagtaacgccaacgaatctcatccagaactcttttgtactttgaaa 10378263 Query: 295 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 354 || ||||| |||| |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 10378264 acggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagacgatcg 10378323 Query: 355 gttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggata 414 ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 10378324 gttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcctaggggta 10378383 Query: 415 tactttactagtngtgaaacttggcataaataaggnttattcccc 459 |||||||| ||| ||||||||| ||||||||||| ||||||||| Sbjct: 10378384 tactttaccagtt-tgaaacttgtcataaataagg-ttattcccc 10378426
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 525 bits (265), Expect = e-146 Identities = 382/419 (91%), Gaps = 5/419 (1%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||||||||| ||||||||||| || | ||| ||||||||||||||||||||| ||| Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270 Query: 416 actttactagtngtgaaacttggcataaataaggnttattccccnnctacctttacttt 474 ||||||| | | ||||||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 82271 actttaccaatt-tgaaacttgtcataaataagg-ttattacccgcctacctttacttt 82327
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 525 bits (265), Expect = e-146 Identities = 382/419 (91%), Gaps = 5/419 (1%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||||||||| ||||||||||| || | ||| ||||||||||||||||||||| ||| Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300 Query: 416 actttactagtngtgaaacttggcataaataaggnttattccccnnctacctttacttt 474 ||||||| | | ||||||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 82301 actttaccaatt-tgaaacttgtcataaataagg-ttattacccgcctacctttacttt 82357
>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22 Length = 607 Score = 511 bits (258), Expect = e-142 Identities = 382/420 (90%), Gaps = 6/420 (1%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 114 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302 Query: 235 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 294 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242 Query: 295 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 354 ||||||||| | || |||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182 Query: 355 gttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggata 414 ||||||||||| ||||||||||| || | ||| ||||||||||||||||||||| || Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125 Query: 415 tactttactagtngtgaaacttggcataaataaggnttattccccnnctacctttacttt 474 |||||||| | | ||||||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 124 tactttaccaatt-tgaaacttgtcataaataagg-ttattacccgcctacctttacttt 67
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 504 bits (254), Expect = e-139 Identities = 360/394 (91%), Gaps = 4/394 (1%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||||||||| ||||||||||| || | ||| ||||||||||||||||||||| ||| Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409 Query: 416 actttactagtngtgaaacttggcataaataagg 449 ||||||| | | ||||||||| ||||||||||| Sbjct: 3410 actttaccaatt-tgaaacttgtcataaataagg 3442
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 504 bits (254), Expect = e-139 Identities = 360/394 (91%), Gaps = 4/394 (1%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||||||||| ||||||||||| || | ||| ||||||||||||||||||||| ||| Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966 Query: 416 actttactagtngtgaaacttggcataaataagg 449 ||||||| | | ||||||||| ||||||||||| Sbjct: 82967 actttaccaatt-tgaaacttgtcataaataagg 82999
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 492 bits (248), Expect = e-136 Identities = 367/404 (90%), Gaps = 5/404 (1%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905 Query: 356 ttggaactttccttgcgagtttccttancccacttttcttcttctttatcctagggatat 415 |||| ||||| |||||||||||||||| |||||| |||||||||||||||| |||| ||| Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845 Query: 416 actttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| ||| ||||||||| |||||||||| ||||||||| Sbjct: 74844 actttaccagtt-tgaaacttgttataaataagg-ttattcccc 74803
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 394 bits (199), Expect = e-106 Identities = 348/395 (88%), Gaps = 5/395 (1%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 18328475 aactacgtcctcgagcctgaggtctgaatttattcataatagtactcctattgacttcgg 18328416 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||| |||| Sbjct: 18328415 ctttagtgatgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctg 18328356 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 18328355 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggtttaatatca 18328296 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||| ||| | |||||| || | |||||||||| ||||||||| Sbjct: 18328295 taacagtttcttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaa 18328236 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| ||||| |||||||||||| | |||| |||||||||||||||||| Sbjct: 18328235 cggacatgtggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcgg 18328178 Query: 356 ttgg--aactttccttgcgagtttccttancccacttttcttcttctttatcctagggat 413 |||| ||||| ||| ||||||| || |||||| ||||||||||||||||||||| | Sbjct: 18328177 ttggtatacttttcttctgagtttctttggcccactcttcttcttctttatcctaggggt 18328118 Query: 414 atactttactagtngtgaaacttggcataaataag 448 |||||||| ||| ||||||||| |||||||||| Sbjct: 18328117 atactttaacagtt-tgaaacttgtcataaataag 18328084
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 394 bits (199), Expect = e-106 Identities = 348/395 (88%), Gaps = 5/395 (1%) Strand = Plus / Minus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 18254796 aactacgtcctcgagcctgaggtctgaatttattcataatagtactcctattgacttcgg 18254737 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||| |||| Sbjct: 18254736 ctttagtgatgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctg 18254677 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 18254676 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggtttaatatca 18254617 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||| ||| | |||||| || | |||||||||| ||||||||| Sbjct: 18254616 taacagtttcttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaa 18254557 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| ||||| |||||||||||| | |||| |||||||||||||||||| Sbjct: 18254556 cggacatgtggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcgg 18254499 Query: 356 ttgg--aactttccttgcgagtttccttancccacttttcttcttctttatcctagggat 413 |||| ||||| ||| ||||||| || |||||| ||||||||||||||||||||| | Sbjct: 18254498 ttggtatacttttcttctgagtttctttggcccactcttcttcttctttatcctaggggt 18254439 Query: 414 atactttactagtngtgaaacttggcataaataag 448 |||||||| ||| ||||||||| |||||||||| Sbjct: 18254438 atactttaacagtt-tgaaacttgtcataaataag 18254405
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 394 bits (199), Expect = e-106 Identities = 348/395 (88%), Gaps = 5/395 (1%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 42519 aactacgtcctcgagcctgaggtctgaatttattcataatagtactcctattgacttcgg 42578 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||| |||| Sbjct: 42579 ctttagtgatgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctg 42638 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 |||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| Sbjct: 42639 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggtttaatatca 42698 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 |||||||||| |||||||||| ||| | |||||| || | |||||||||| ||||||||| Sbjct: 42699 taacagtttcttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaa 42758 Query: 296 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 355 | ||||| |||| ||||| |||||||||||| | |||| |||||||||||||||||| Sbjct: 42759 cggacatgtggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcgg 42816 Query: 356 ttgg--aactttccttgcgagtttccttancccacttttcttcttctttatcctagggat 413 |||| ||||| ||| ||||||| || |||||| ||||||||||||||||||||| | Sbjct: 42817 ttggtatacttttcttctgagtttctttggcccactcttcttcttctttatcctaggggt 42876 Query: 414 atactttactagtngtgaaacttggcataaataag 448 |||||||| ||| ||||||||| |||||||||| Sbjct: 42877 atactttaacagtt-tgaaacttgtcataaataag 42910
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 134 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 193 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590 Query: 194 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 253 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650 Query: 254 aacgccac 261 || ||||| Sbjct: 212651 aaggccac 212658
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 134 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 193 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612 Query: 194 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 253 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672 Query: 254 aacgccac 261 || ||||| Sbjct: 553673 aaggccac 553680
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 134 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 193 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889 Query: 194 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 253 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949 Query: 254 aacgccac 261 || ||||| Sbjct: 456950 aaggccac 456957
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 134 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 193 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124 Query: 194 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 253 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184 Query: 254 aacgccac 261 || ||||| Sbjct: 230185 aaggccac 230192
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 141 bits (71), Expect = 2e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 179 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 238 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213 Query: 239 cagtttcctcgtagtaacgccaccgaatctc 269 |||||| |||||||||||||| |||||||| Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 133 bits (67), Expect = 6e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | | |||| || | |||||||| Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| |||| | | || || ||| || | | |||||||| ||| Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 86479 ataagcgtttcctcataggaacg 86501
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 86232 ataagcgtttcctcataggaacg 86254
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 85357 ataagcgtttcctcataggaacg 85379
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 86230 ataagcgtttcctcataggaacg 86252
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| |||| |||||||||||||| | |||||| Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 86001 ataagcgtttcctcataggaacg 86023
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 85369 ataagcgtttcctcataggaacg 85391
>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1015 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||| |||| ||||||||| ||| | || || | |||||| ||||||| |||| Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441 Query: 296 cagacata 303 |||||||| Sbjct: 442 cagacata 449
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 85521 ataagcgtttcctcataggaacg 85543
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 85518 ataagcgtttcctcataggaacg 85540
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403 Query: 235 ataacagtttcctcgtagtaacg 257 |||| |||||||| ||| |||| Sbjct: 85404 ataagcgtttcctcataggaacg 85426
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 103 bits (52), Expect = 5e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||||||||||||||||||| | |||||||||| ||||||| | |||||||| Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566 Query: 115 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 174 |||||| |||| | |||||| | || || | ||||| ||| | | | |||||||| ||| Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626 Query: 175 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 234 || ||||||||||| || || ||||||||| |||||||||| |||||||| | |||||| Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686 Query: 235 ataa 238 |||| Sbjct: 85687 ataa 85690
>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic spacer and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 770 Score = 99.6 bits (50), Expect = 8e-18 Identities = 118/141 (83%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| Sbjct: 57 gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116 Query: 223 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 282 || | ||||||||||| |||||||| || |||| | ||||| | |||| |||||| Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176 Query: 283 tgtgctttgaaaacagacata 303 ||||||||||||||||||||| Sbjct: 177 tgtgctttgaaaacagacata 197
>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1029 Score = 95.6 bits (48), Expect = 1e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458 Query: 296 cagacata 303 |||||||| Sbjct: 459 cagacata 466
>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22 Length = 127365 Score = 93.7 bits (47), Expect = 5e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 124 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 183 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562 Query: 184 accaact 190 ||||||| Sbjct: 18561 accaact 18555 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 217 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 276 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487 Query: 277 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 329 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 64 cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 123 ||||||||||||||| | ||||| |||||| |||||| | ||||||| |||||| || Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423 Query: 124 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 183 || | |||| | |||| | |||| || ||| |||| | |||||||| ||||| |||||| Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483 Query: 184 accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 243 |||||||| || ||||||||| | |||||||| ||||| || | |||||||||| ||| Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543 Query: 244 tcctcgtagtaacg 257 ||||||||| |||| Sbjct: 88544 tcctcgtaggaacg 88557
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 94/111 (84%) Strand = Plus / Minus Query: 276 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 335 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351 Query: 336 gaacttaagtagacgatcggttggaactttccttgcgagtttccttanccc 386 |||||||| |||| |||||||||| ||| | ||||| |||||||||| ||| Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 87.7 bits (44), Expect = 3e-14 Identities = 94/111 (84%) Strand = Plus / Plus Query: 276 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 335 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146 Query: 336 gaacttaagtagacgatcggttggaactttccttgcgagtttccttanccc 386 |||||||| |||| |||||||||| ||| | ||||| |||||||||| ||| Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 94/111 (84%) Strand = Plus / Minus Query: 276 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 335 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466 Query: 336 gaacttaagtagacgatcggttggaactttccttgcgagtttccttanccc 386 |||||||| |||| |||||||||| ||| | ||||| |||||||||| ||| Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415
>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1060 Score = 87.7 bits (44), Expect = 3e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | ||||||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467 Query: 296 cagacata 303 |||||||| Sbjct: 468 cagacata 475
>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1172 Score = 87.7 bits (44), Expect = 3e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||| | |||| ||||||||| |||| | || || | |||||| || |||| |||| Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | ||| ||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522 Query: 296 cagacata 303 |||||||| Sbjct: 523 cagacata 530
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| |||||| Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296 Query: 223 aggttcagtatcataacagtttcctcgtagtaacg 257 || | |||||||||| ||||| |||||| |||| Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 81.8 bits (41), Expect = 2e-12 Identities = 197/249 (79%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 ||||||||||| ||| |||||| | || || |||| ||||||| || | ||||||||| Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||| |||||||| ||| |||| || ||| | ||| ||| | |||||||| |||| Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | |||||||||| || || |||||||||||||||||||| |||||||| | ||||| || Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 ||| |||||| | ||| |||| | ||||||| |||| |||||| |||||||| | Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983 Query: 296 cagacatag 304 ||||||||| Sbjct: 84984 cagacatag 84992
>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein Length = 5896 Score = 79.8 bits (40), Expect = 8e-12 Identities = 93/111 (83%) Strand = Plus / Plus Query: 276 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 335 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469 Query: 336 gaacttaagtagacgatcggttggaactttccttgcgagtttccttanccc 386 |||||||| |||| |||||| ||| ||| | ||||| |||||||||| ||| Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142 Query: 223 aggttcagtatcataacagtttcctcgtagtaacg 257 || | |||||||| | ||||| |||||| |||| Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371 Query: 223 aggttcagtatcataacagtttcctcgtagtaacg 257 || | |||||||| | ||||| |||||| |||| Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 107 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 166 |||||||||||||| |||| ||||||| |||| | ||| |||||| ||| | |||| Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369 Query: 167 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 226 |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| | Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429 Query: 227 tcagtatcataa 238 ||||||||||| Sbjct: 89430 ccagtatcataa 89441
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 115 |||||||||||||||| || ||| | || || ||||||||||| | ||| ||||||| | Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750 Query: 116 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 175 ||||| |||| ||||| | ||| | ||| || ||| |||| | |||||||| |||| Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810 Query: 176 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 235 | |||||||| || |||||||| ||||||||||| | ||| ||||| || | ||||||| Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870 Query: 236 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 295 | | | |||||| || |||| | ||||||| |||| |||||| |||||||||||| Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930 Query: 296 cagacata 303 |||||||| Sbjct: 85931 cagacata 85938
>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence Length = 813 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 107 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 166 |||||||||||||| |||||| |||||| ||| || |||| || ||| ||| | |||| Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65 Query: 167 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 224 |||| ||||| ||||||| ||| || || | ||||||| |||||||||| |||||||| Sbjct: 64 ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||| ||||||| ||| || || ||||||||| ||||||||||||||||| Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631 Query: 223 ag 224 || Sbjct: 630 ag 629
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||| ||||||| ||| || || ||||||||| ||||||||||||||||| Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311 Query: 223 ag 224 || Sbjct: 82312 ag 82313
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 163 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 222 |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437 Query: 223 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 268 || | |||||||||| |||||||| ||| |||||| ||||||| Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 55 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 114 |||||||| ||||||||||||||| | ||| ||||||| ||||||| || | |||||| Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041 Query: 115 gctttagtaatgaataaattcgctt 139 |||||| |||| | |||||| |||| Sbjct: 83042 gctttactaatcactaaatttgctt 83066
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 137 ctttgtcgaaatccctataatgagttgcatttg 169 |||||| |||||||||||||||||| ||||||| Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 137 ctttgtcgaaatccctataatgagttgcatttg 169 |||||| |||||||||||||||||| ||||||| Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 56 aactacgtcctcgagctcgaggtctgaatttcttca 91 ||||||||||||||||||||||| | ||||| |||| Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541
>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtct 80 |||||||||||||||||||||| Sbjct: 192 tacgtcctcgagctcgaggtct 171
>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene, partial cds Length = 221 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtct 80 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene, partial cds Length = 231 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtct 80 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene, partial cds Length = 216 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtct 80 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 140 tgtcgaaatccctataatgagttgcatttg 169 ||||||||||| |||||||||| ||||||| Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433
>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein (nifH) gene, partial cds Length = 356 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 198 tacgtcctcgagctcgaggtc 178
>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the complete plasmid sequence Length = 10370 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 8029 acgtcctcgagctcgaggtct 8009
>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene, partial cds Length = 234 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 93 acgtcctcgagctcgaggtct 73
>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene, partial cds Length = 249 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtc 74
>gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogenase reductase (nifH) mRNA, partial cds Length = 324 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, partial cds Length = 317 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 90 acgtcctcgagctcgaggtct 70
>gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW13 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, complete sequence Length = 205915 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 agggatacgtttttgtgctttgaaa 327 |||||||||||||||||| |||||| Sbjct: 176607 agggatacgtttttgtgccttgaaa 176583
>emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-54B Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-44A Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-41B Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERE-22A Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone GYMC-29B Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 114 tacgtcctcgagctcgaggtc 94
>emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone GYMC-22B Length = 357 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 114 tacgtcctcgagctcgaggtc 94
>gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein-like protein (nifH) gene, partial sequence Length = 447 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 85 acgtcctcgagctcgaggtct 65
>gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-like protein (nifH) gene, partial sequence Length = 447 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-like protien (nifH) gene, partial sequence Length = 450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein (nifH) gene, partial cds Length = 445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein (nifH) gene, partial cds Length = 445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tacgtcctcgagctcgaggtc 79 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitrogenase reductase subunit, partial cds Length = 726 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 192 acgtcctcgagctcgaggtct 172
>dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein of nitrogenase-nifH, partial cds, strain:F-4 Length = 418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 203 acgtcctcgagctcgaggtct 183
>gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) gene, partial cds Length = 715 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 165 acgtcctcgagctcgaggtct 145
>gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH) gene, partial sequence Length = 331 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) gene, partial sequence Length = 239 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 98 acgtcctcgagctcgaggtct 78
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 1704617 acgtcctcgagctcgaggtct 1704637
>dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR32 Length = 390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 203 acgtcctcgagctcgaggtct 183
>gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa dinitrogenase reductase (nifH) gene, partial cds Length = 403 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 177 acgtcctcgagctcgaggtct 157
>gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa dinitrogenase reductase (nifH) gene, partial cds Length = 403 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 177 acgtcctcgagctcgaggtct 157
>gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrogenase reductase (nifH) gene, partial cds Length = 355 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone rp23-199g2, complete sequence Length = 214798 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 agggatacgtttttgtgctttgaaa 327 |||||||||||||||||| |||||| Sbjct: 27852 agggatacgtttttgtgccttgaaa 27828
>gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reductase (nifH) gene, partial cds Length = 755 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 174 acgtcctcgagctcgaggtct 154
>gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 dinitrogenase reductase (nifH) gene, partial cds Length = 353 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 172 acgtcctcgagctcgaggtct 152
>gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtct 80 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase iron protein (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase iron protein (nifH) gene, partial cds Length = 359 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtc 94
>gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase reductase (nifH) gene, partial cds Length = 383 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 209 acgtcctcgagctcgaggtc 190
>gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtc 172
>gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a dinitrogenase reductase (nifH) gene, partial cds Length = 397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtc 152
>gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cgtcctcgagctcgaggtct 80 |||||||||||||||||||| Sbjct: 94 cgtcctcgagctcgaggtct 75
>gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW10 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence Length = 162162 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 cccacttttcttcttctttatcct 407 ||||||||||||||||||| |||| Sbjct: 128312 cccacttttcttcttctttttcct 128335
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ccacttttcttcttctttat 404 |||||||||||||||||||| Sbjct: 101412 ccacttttcttcttctttat 101431
>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 aactctttgtgctttgaaaa 295 |||||||||||||||||||| Sbjct: 86786 aactctttgtgctttgaaaa 86767
>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19 Length = 411 Score = 40.1 bits (20), Expect = 6.6 Identities = 37/42 (88%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 433 acttggcataaataaggnttattccccnnctacctttacttt 474 ||||| ||||||||||| ||||| ||| ||||||||||||| Sbjct: 411 acttgtcataaataagg-ttattacccgcctacctttacttt 371
>dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protein of nitrogenase, partial cds, strain:IAM 14808 Length = 416 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 182 acgtcctcgagctcgaggtc 163
>gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 dinitrogen reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH) gene, partial sequence Length = 339 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH) gene, partial sequence Length = 336 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtc 94
>gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH) gene, partial sequence Length = 330 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 107 acgtcctcgagctcgaggtc 88
>gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH) gene, partial sequence Length = 333 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 110 acgtcctcgagctcgaggtc 91
>gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH) gene, partial sequence Length = 288 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 65 acgtcctcgagctcgaggtc 46
>gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH) gene, partial sequence Length = 333 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 110 acgtcctcgagctcgaggtc 91
>gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH) gene, partial sequence Length = 338 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 114 acgtcctcgagctcgaggtc 95
>gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH) gene, partial sequence Length = 318 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH) gene, partial sequence Length = 312 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein (nifH) gene, partial cds Length = 336 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 179 acgtcctcgagctcgaggtc 160
>gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clone F2 dinitrogenase reductase (nifH) gene, partial cds Length = 417 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtc 172
>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, ribosomal protein L22 (rpL22) gene, 5' end, transfer RNA-Ile and -His genes Length = 2789 Score = 40.1 bits (20), Expect = 6.6 Identities = 48/55 (87%), Gaps = 2/55 (3%) Strand = Plus / Minus Query: 405 cctagggatatactttactagtngtgaaacttggcataaataaggnttattcccc 459 ||||||| |||||||||| | | ||||||||| ||||||||||| ||||||||| Sbjct: 2789 cctaggggtatactttaccaatt-tgaaacttgtcataaataagg-ttattcccc 2737
>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete sequence Length = 202551 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 gtgctttgaaaacagacataggga 307 |||||||||||||| ||||||||| Sbjct: 115047 gtgctttgaaaacaaacataggga 115024
>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence Length = 140935 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cttttcttcttctttatcct 407 |||||||||||||||||||| Sbjct: 3454 cttttcttcttctttatcct 3473
>gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 acgtcctcgagctcgaggtc 79 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 178 gaataaaccaactttaagatgggataagatgctcgatagggcat 221 ||||||||||| || || ||||||||| || ||||||| ||||| Sbjct: 83762 gaataaaccaatttaaaaatgggataacatcctcgataaggcat 83805
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cttttcttcttctttatcct 407 |||||||||||||||||||| Sbjct: 3454 cttttcttcttctttatcct 3473
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 ctttacttttattttggaat 485 |||||||||||||||||||| Sbjct: 192897 ctttacttttattttggaat 192916 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,861,095 Number of Sequences: 3902068 Number of extensions: 4861095 Number of successful extensions: 109066 Number of sequences better than 10.0: 195 Number of HSP's better than 10.0 without gapping: 196 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 108091 Number of HSP's gapped (non-prelim): 875 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
