ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BSPB_POPDE (Q09117) Bark storage protein B precursor 49 1e-05
2BSPA_POPDE (Q07469) Bark storage protein A precursor 49 1e-05
3MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 45 2e-04
4MTNN_BUCBP (Q89AQ7) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 42 0.002
5MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 38 0.021
6MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 36 0.081
7MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 35 0.18
8MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 35 0.23
9MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 35 0.23
10MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methyl... 33 0.68
11DEOD_CLOTE (Q894Z3) Purine nucleoside phosphorylase deoD-type (E... 31 3.4
12MTNN_SALTY (P60217) MTA/SAH nucleosidase (EC 3.2.2.9) (P46) (5'-... 30 5.8
13MTNN_SALTI (P60216) MTA/SAH nucleosidase (EC 3.2.2.9) (P46) (5'-... 30 5.8

>BSPB_POPDE (Q09117) Bark storage protein B precursor|
          Length = 312

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = -1

Query: 624 QHAFWVPASKRYY-ALAKKLEGMELPACVNATTCLPRAPRVTRVSKGCSANVFLDNAEYR 448
           +  FW+P +K +Y A  + L+ M+L  C +   CLP  P+V   SK  +++ ++ N  Y 
Sbjct: 178 KEVFWLPITKSWYNAATEALKDMKLRKCYS-DECLPGEPKVVFGSKSSTSDFYVRNKAYG 236

Query: 447 QFLRKQFGCTPVEMESAAVALVA 379
            FL   F     +  SA+VAL +
Sbjct: 237 DFLNDNFDAKTADTTSASVALTS 259



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>BSPA_POPDE (Q07469) Bark storage protein A precursor|
          Length = 312

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = -1

Query: 624 QHAFWVPASKRYY-ALAKKLEGMELPACVNATTCLPRAPRVTRVSKGCSANVFLDNAEYR 448
           +  FW+P +K +Y A  + L+ M+L  C +   CLP  P+V   SK  +++ ++ N  Y 
Sbjct: 178 KEVFWLPITKSWYNAATEALKDMKLRKCYS-DECLPGKPKVVFGSKSSTSDFYVRNKAYG 236

Query: 447 QFLRKQFGCTPVEMESAAVALVA 379
            FL   F     +  SA+VAL +
Sbjct: 237 DFLNDNFDAKTADTASASVALTS 259



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>MTNN_TREPA (P96122) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 269

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = -1

Query: 510 RVTRVSKG--CSANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXX 337
           RV+R+ +G   S ++F+ +A+ R  + ++FG   VEME AA A VA   GVPF+ IR   
Sbjct: 158 RVSRLVEGRVASGDLFVSDAQTRARIIREFGAHGVEMEGAAFAHVASVNGVPFVIIRCIS 217

Query: 336 XXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 232
                          F   AA+ +  + L+ +  L
Sbjct: 218 DGAGAEQDVSMSYKEFSTRAARRSALLTLRVLERL 252



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>MTNN_BUCBP (Q89AQ7) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 252

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 307
           S ++F+D  E +  L+K+F     V+ME+AA+A V +   +P L I+             
Sbjct: 155 SGDIFIDTCEKKSLLKKRFPKAIAVDMEAAAIAHVCYQFNIPILIIK--SISDSSDINAA 212

Query: 306 NEASTFIDIAAKNAVQVMLKFVPLLGKSAEEM 211
           +    FI++A+KN+  V +  +  L K+ + +
Sbjct: 213 DNFKYFINLASKNSSLVTINVLQTLFKNTKNI 244



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>MTNN_HELPY (O24915) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 231

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXGN 304
           S + F+ + E ++FL  +F  + VEME A+VA V    GVP   +R              
Sbjct: 150 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR------SISDNADE 203

Query: 303 EASTFIDIAAKNAVQVMLKFV 241
           EA+   D   + + Q   KF+
Sbjct: 204 EANMSFDAFLEKSAQTSAKFL 224



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>MTNN_HELPJ (Q9ZMY2) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 230

 Score = 36.2 bits (82), Expect = 0.081
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTIR 346
           S + F+ + E ++FL  +F  + VEME A+VA V    GVP   +R
Sbjct: 149 SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLR 194



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>MTNN_HAEIN (P45113) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 229

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = -1

Query: 486 CSANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXX 310
           CS + F+++ +    ++  F   T VEME+ A+A V +   VPF+ +R            
Sbjct: 146 CSGDSFINSEDKIAQIKADFPNVTGVEMEATAIAQVCYAFNVPFVVVRAISDGGDGKASM 205

Query: 309 GNEASTFIDIAAKNAVQVMLKFVPLL 232
             E   F+ +AAK +  ++L  +  L
Sbjct: 206 SFE--EFLPLAAKQSSALVLGMIDRL 229



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>MTNN_MYCTU (P67656) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 255

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 28/114 (24%), Positives = 49/114 (42%)
 Frame = -1

Query: 573 KLEGMELPACVNATTCLPRAPRVTRVSKGCSANVFLDNAEYRQFLRKQFGCTPVEMESAA 394
           +L+G  L     A     R PR+       + + +L     R  L  + G   VEME  A
Sbjct: 142 RLDGFTLAPLSTAAGGGGRQPRIY-YGTILTGDQYLHCERTRNRLHHELGGMAVEMEGGA 200

Query: 393 VALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 232
           VA +  +  +P+L IR              + + F+   A ++ +V+L+ +P+L
Sbjct: 201 VAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAASSARVLLRLLPVL 252



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>MTNN_MYCBO (P67657) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 255

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 28/114 (24%), Positives = 49/114 (42%)
 Frame = -1

Query: 573 KLEGMELPACVNATTCLPRAPRVTRVSKGCSANVFLDNAEYRQFLRKQFGCTPVEMESAA 394
           +L+G  L     A     R PR+       + + +L     R  L  + G   VEME  A
Sbjct: 142 RLDGFTLAPLSTAAGGGGRQPRIY-YGTILTGDQYLHCERTRNRLHHELGGMAVEMEGGA 200

Query: 393 VALVAHTQGVPFLTIRXXXXXXXXXXXXGNEASTFIDIAAKNAVQVMLKFVPLL 232
           VA +  +  +P+L IR              + + F+   A ++ +V+L+ +P+L
Sbjct: 201 VAQICASFDIPWLVIRALSDLAGADSGV--DFNRFVGEVAASSARVLLRLLPVL 252



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>MTNN_BACSU (O32028) MTA/SAH nucleosidase (EC 3.2.2.9) (5'-methylthioadenosine|
           nucleosidase) (S-adenosylhomocysteine nucleosidase)
          Length = 231

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
 Frame = -1

Query: 501 RVSKGCSA--NVFLDNAEYRQFLRKQFG-CTPVEMESAAVALVAHTQGVPFLTIRXXXXX 331
           +V+KG  A  + F+++ +  + +R +F     VEME+AAVA V H    PF+ IR     
Sbjct: 140 QVAKGTIATGDSFMNDPKRVEEVRARFSDLYAVEMEAAAVAQVCHQFKTPFVVIRALSDI 199

Query: 330 XXXXXXXGNEASTFIDIAAKNAVQVMLKFV 241
                    +   F++ AA ++ +++LK +
Sbjct: 200 AGKESHVSFD--QFLEQAAVHSTELVLKVI 227



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>DEOD_CLOTE (Q894Z3) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)|
           (PNP)
          Length = 235

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQFGCTPVEMESAAVALVAHTQGVPFLTI 349
           S+++F D+ +       ++GC  VEME+AA+  +A   GV  LT+
Sbjct: 155 SSDIFYDDDKEDWKTWAKYGCLGVEMETAALYTIAAKYGVNALTL 199



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>MTNN_SALTY (P60217) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)|
           (5'-methylthioadenosine nucleosidase)
           (S-adenosylhomocysteine nucleosidase)
          Length = 232

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 307
           S + F++ +     +R  F     VEME+ A+A V H   VPF+ +R             
Sbjct: 147 SGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLS 206

Query: 306 NEASTFIDIAAKNAVQVMLKFVPLL 232
            +   F+ +AAK +  ++   V  L
Sbjct: 207 FD--EFLAVAAKQSTLMVETLVQKL 229



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>MTNN_SALTI (P60216) MTA/SAH nucleosidase (EC 3.2.2.9) (P46)|
           (5'-methylthioadenosine nucleosidase)
           (S-adenosylhomocysteine nucleosidase)
          Length = 232

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = -1

Query: 483 SANVFLDNAEYRQFLRKQF-GCTPVEMESAAVALVAHTQGVPFLTIRXXXXXXXXXXXXG 307
           S + F++ +     +R  F     VEME+ A+A V H   VPF+ +R             
Sbjct: 147 SGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLS 206

Query: 306 NEASTFIDIAAKNAVQVMLKFVPLL 232
            +   F+ +AAK +  ++   V  L
Sbjct: 207 FD--EFLAVAAKQSTLMVETLVQKL 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,643,060
Number of Sequences: 219361
Number of extensions: 879433
Number of successful extensions: 2414
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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