ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 30 3.7
2KCC1_EMENI (Q00771) Calcium/calmodulin-dependent protein kinase ... 30 3.7
3KPSH1_PINFU (Q4KTY1) Serine/threonine-protein kinase H1 homolog ... 30 4.9
4OAZ_YEAST (Q02803) Ornithine decarboxylase antizyme (ODC-Az) 29 8.3
5CDPK3_PLAYO (Q7RAV5) Calcium-dependent protein kinase 3 (EC 2.7.... 29 8.3
6CDPK3_PLAF7 (Q9NJU9) Calcium-dependent protein kinase 3 (EC 2.7.... 29 8.3
7KCC1_METAN (O14408) Calcium/calmodulin-dependent protein kinase ... 29 8.3

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 428 KTKIYTIMAXTTGGELFNKI 369
           K+KIY +M    GGELFNK+
Sbjct: 82  KSKIYFVMEHVKGGELFNKV 101



to top

>KCC1_EMENI (Q00771) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)|
           (CMPK)
          Length = 414

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 434 QNKTKIYTIMAXTTGGELFNKIC 366
           ++K K Y +    TGGELF++IC
Sbjct: 87  ESKDKFYIVTQLATGGELFDRIC 109



to top

>KPSH1_PINFU (Q4KTY1) Serine/threonine-protein kinase H1 homolog (EC 2.7.11.1)|
          Length = 415

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 434 QNKTKIYTIMAXTTGGELFNKI 369
           + K K+Y +M   TGGELF++I
Sbjct: 143 ETKDKVYMVMELATGGELFDRI 164



to top

>OAZ_YEAST (Q02803) Ornithine decarboxylase antizyme (ODC-Az)|
          Length = 292

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -2

Query: 435 TKQDKNIHNHGXYHWRRIVQ*NMLSS*SFIMY---F*QS--WCK 319
           TKQ KN ++H  Y+WR+      L S  FI+Y   F Q   WCK
Sbjct: 139 TKQYKNNNSHDGYNWRK------LGSQYFILYLPLFTQELIWCK 176



to top

>CDPK3_PLAYO (Q7RAV5) Calcium-dependent protein kinase 3 (EC 2.7.11.1)|
          Length = 538

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -3

Query: 446 LTSSQNKTKIYTIMAXTTGGELFNKI 369
           L + +++ +IY IM   TGGELF+KI
Sbjct: 173 LETFEDEEQIYLIMDLCTGGELFDKI 198



to top

>CDPK3_PLAF7 (Q9NJU9) Calcium-dependent protein kinase 3 (EC 2.7.11.1) (PfCDPK3)|
          Length = 562

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 446 LTSSQNKTKIYTIMAXTTGGELFNKI 369
           L + ++  +IY +M   TGGELF+KI
Sbjct: 179 LETFEDSNQIYLVMELCTGGELFDKI 204



to top

>KCC1_METAN (O14408) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)|
          Length = 382

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 434 QNKTKIYTIMAXTTGGELFNKIC 366
           +++ K Y +    TGGELF++IC
Sbjct: 87  ESRDKFYIVTQLATGGELFDRIC 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,550,103
Number of Sequences: 219361
Number of extensions: 1420669
Number of successful extensions: 3174
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top