Clone Name	rbasd19f02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1047	0.0
2	ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA	662	0.0
3	ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA	662	0.0
4	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	662	0.0
5	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	662	0.0
6	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	662	0.0
7	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	662	0.0
8	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	662	0.0
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	662	0.0
10	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	662	0.0
11	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	662	0.0
12	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	662	0.0
13	ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA	654	0.0
14	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
16	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
17	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
18	dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
19	dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D...	654	0.0
20	dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clon...	654	0.0
21	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	648	0.0
22	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	648	0.0
23	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	648	0.0
24	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	648	0.0
25	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	585	e-164
26	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	585	e-164
27	emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal...	571	e-159
28	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	561	e-156
29	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	561	e-156
30	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	539	e-150
31	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	462	e-127
32	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	462	e-127
33	emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa...	462	e-127
34	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	182	9e-43
35	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	182	9e-43
36	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	182	9e-43
37	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	182	9e-43
38	gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA inter...	182	9e-43
39	gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA i...	182	9e-43
40	gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA in...	182	9e-43
41	gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA i...	182	9e-43
42	gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA inter...	182	9e-43
43	gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA inter...	182	9e-43
44	gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA inter...	182	9e-43
45	gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA inter...	182	9e-43
46	gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA inter...	182	9e-43
47	gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial...	182	9e-43
48	gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, par...	182	9e-43
49	emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for h...	176	6e-41
50	gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer,...	176	6e-41
51	gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, p...	176	6e-41
52	gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, pa...	176	6e-41
53	gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer,...	176	6e-41
54	gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, part...	176	6e-41
55	gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, par...	176	6e-41
56	gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, parti...	176	6e-41
57	gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, par...	176	6e-41
58	gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, par...	176	6e-41
59	gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, ...	176	6e-41
60	gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, p...	176	6e-41
61	gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer,...	176	6e-41
62	gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, p...	176	6e-41
63	gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, ...	176	6e-41
64	gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, pa...	176	6e-41
65	gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, p...	176	6e-41
66	gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer,...	176	6e-41
67	gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer...	176	6e-41
68	gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic space...	176	6e-41
69	gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, parti...	176	6e-41
70	gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, ...	176	6e-41
71	gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, part...	176	6e-41
72	gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	176	6e-41
73	gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, p...	176	6e-41
74	gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, pa...	176	6e-41
75	gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer...	176	6e-41
76	gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, parti...	176	6e-41
77	gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer,...	176	6e-41
78	gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, pa...	176	6e-41
79	gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US Psb...	176	6e-41
80	dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR ...	174	2e-40
81	dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR ...	174	2e-40
82	gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, par...	168	1e-38
83	gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, par...	168	1e-38
84	gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA ...	168	1e-38
85	dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR re...	167	6e-38
86	dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SS...	167	6e-38
87	dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR re...	167	6e-38
88	dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SS...	167	6e-38
89	gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer...	167	6e-38
90	gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene,...	165	2e-37
91	gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, par...	165	2e-37
92	gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, p...	163	9e-37
93	gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, ...	163	9e-37
94	gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial...	163	9e-37
95	emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal...	161	3e-36
96	gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, pa...	161	3e-36
97	gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (ps...	161	3e-36
98	emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,...	159	1e-35
99	gb|AF527485.1| Chloroplast transformation vector pVSR326, comple...	159	1e-35
100	gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen...	159	1e-35
101	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	159	1e-35
102	gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer...	159	1e-35
103	gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, ...	159	1e-35
104	gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, ...	159	1e-35
105	dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR reg...	159	1e-35
106	dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR...	159	1e-35
107	dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR...	159	1e-35
108	dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR regio...	159	1e-35
109	dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
110	dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SS...	159	1e-35
111	dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SS...	159	1e-35
112	dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
113	dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing ...	159	1e-35
114	dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing ...	159	1e-35
115	dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing ...	159	1e-35
116	dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing ...	159	1e-35
117	dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing S...	159	1e-35
118	dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing S...	159	1e-35
119	dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
120	dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SS...	159	1e-35
121	dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR re...	159	1e-35
122	dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR ...	159	1e-35
123	dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing...	159	1e-35
124	dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SS...	159	1e-35
125	dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR ...	159	1e-35
126	dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing...	159	1e-35
127	dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR ...	159	1e-35
128	dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing...	159	1e-35
129	dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR reg...	159	1e-35
130	dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR ...	159	1e-35
131	dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR...	159	1e-35
132	dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing ...	159	1e-35
133	dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing ...	159	1e-35
134	dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR ...	159	1e-35
135	dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing ...	159	1e-35
136	dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing S...	159	1e-35
137	dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR regio...	159	1e-35
138	dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing S...	159	1e-35
139	dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
140	dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
141	dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR...	159	1e-35
142	dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SS...	159	1e-35
143	dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SS...	159	1e-35
144	dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR r...	159	1e-35
145	dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR reg...	159	1e-35
146	dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR ...	159	1e-35
147	dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR reg...	159	1e-35
148	dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SS...	159	1e-35
149	gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein ...	159	1e-35
150	dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
151	dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
152	dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
153	dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clon...	159	1e-35
154	gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein ...	159	1e-35
155	emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa...	159	1e-35
156	gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, part...	157	5e-35
157	gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, part...	157	5e-35
158	gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, part...	157	5e-35
159	gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, part...	157	5e-35
160	gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, part...	157	5e-35
161	gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, part...	157	5e-35
162	gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, p...	157	5e-35
163	gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, par...	157	5e-35
164	gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, pa...	157	5e-35
165	gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, par...	157	5e-35
166	gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, ...	157	5e-35
167	gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, par...	157	5e-35
168	gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, ...	157	5e-35
169	gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, pa...	157	5e-35
170	gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer...	145	2e-31
171	emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	141	3e-30
172	gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic space...	139	1e-29
173	gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, part...	137	5e-29
174	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	133	8e-28
175	dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SS...	133	8e-28
176	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	117	5e-23
177	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	117	5e-23
178	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	117	5e-23
179	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	117	5e-23
180	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	117	5e-23
181	gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer...	111	3e-21
182	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	109	1e-20
183	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	109	1e-20
184	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	109	1e-20
185	gb|AY582139.1| Panax ginseng chloroplast, complete genome	103	7e-19
186	gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trn...	100	1e-17
187	gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, part...	96	2e-16
188	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	94	7e-16
189	gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon...	94	7e-16
190	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
191	dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
192	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	92	3e-15
193	gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, par...	88	4e-14
194	gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA...	88	4e-14
195	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	86	2e-13
196	emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP...	86	2e-13
197	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	82	3e-12
198	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	78	4e-11
199	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
200	dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D...	78	4e-11
201	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	78	4e-11
202	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	72	2e-09
203	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	72	2e-09
204	gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite se...	68	4e-08
205	emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	68	4e-08
206	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	68	4e-08
207	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	68	4e-08
208	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	58	4e-05
209	gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
210	emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for ...	52	0.002
211	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.002
212	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	52	0.002
213	gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding prot...	52	0.002
214	emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene	52	0.002
215	gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome...	50	0.009
216	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
217	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	48	0.036
218	gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase r...	44	0.56
219	gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) ge...	44	0.56
220	gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH...	44	0.56
221	gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH ...	44	0.56
222	gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH ...	44	0.56
223	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	44	0.56
224	gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome...	44	0.56
225	gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitroge...	42	2.2
226	gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section...	42	2.2
227	gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenas...	42	2.2
228	gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenas...	42	2.2
229	gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenas...	42	2.2
230	gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenas...	42	2.2
231	gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase ...	42	2.2
232	gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase ...	42	2.2
233	gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase ...	42	2.2
234	gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase ...	42	2.2
235	gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase ...	42	2.2
236	gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase ...	42	2.2
237	gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gen...	42	2.2
238	gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH...	42	2.2
239	gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH ...	42	2.2
240	gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase ...	42	2.2
241	gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogen...	42	2.2
242	gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (...	42	2.2
243	gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (n...	42	2.2
244	gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, ...	42	2.2
245	gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW1...	42	2.2
246	ref|XM_804647.1| Trypanosoma cruzi strain CL Brener retrotranspo...	42	2.2
247	gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, co...	42	2.2
248	emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	2.2
249	emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
250	emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
251	emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
252	emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
253	emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
254	emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
255	gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein...	42	2.2
256	gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-l...	42	2.2
257	gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (...	42	2.2
258	gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (...	42	2.2
259	gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-l...	42	2.2
260	gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein ...	42	2.2
261	gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein...	42	2.2
262	gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein ...	42	2.2
263	dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitroge...	42	2.2
264	dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein ...	42	2.2
265	gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) ...	42	2.2
266	gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH...	42	2.2
267	gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) ...	42	2.2
268	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	42	2.2
269	dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for di...	42	2.2
270	gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa di...	42	2.2
271	gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa di...	42	2.2
272	gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrog...	42	2.2
273	gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone...	42	2.2
274	gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#0...	42	2.2
275	gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#0...	42	2.2
276	gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#0...	42	2.2
277	gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#0...	42	2.2
278	gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#0...	42	2.2
279	gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#0...	42	2.2
280	gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reduct...	42	2.2
281	gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 ...	42	2.2
282	gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 ...	42	2.2
283	gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 ...	42	2.2
284	gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 ...	42	2.2
285	gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 ...	42	2.2
286	emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4,...	42	2.2
287	gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase ir...	40	8.7
288	gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrog...	40	8.7
289	gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase ir...	40	8.7
290	gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase red...	40	8.7
291	gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co...	40	8.7
292	gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp...	40	8.7
293	gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogen...	40	8.7
294	gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogen...	40	8.7
295	gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitroge...	40	8.7
296	gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitroge...	40	8.7
297	gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenas...	40	8.7
298	gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenas...	40	8.7
299	gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase r...	40	8.7
300	gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a...	40	8.7
301	gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reducta...	40	8.7
302	gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reducta...	40	8.7
303	gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogena...	40	8.7
304	gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ...	40	8.7
305	gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3...	40	8.7
306	gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9...	40	8.7
307	gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8...	40	8.7
308	gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5...	40	8.7
309	gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3...	40	8.7
310	gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2...	40	8.7
311	gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW1...	40	8.7
312	gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1...	40	8.7
313	gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome...	40	8.7
314	gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosom...	40	8.7
315	emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 ...	40	8.7
316	emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chr...	40	8.7
317	emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on ch...	40	8.7
318	emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1...	40	8.7
319	emb|BX323591.13| Zebrafish DNA sequence from clone CH211-208C6 i...	40	8.7
320	gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete seq...	40	8.7
321	dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protei...	40	8.7
322	gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 din...	40	8.7
323	gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 din...	40	8.7
324	gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH...	40	8.7
325	gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH...	40	8.7
326	gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH...	40	8.7
327	gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH...	40	8.7
328	gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH...	40	8.7
329	gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH...	40	8.7
330	gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH...	40	8.7
331	gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH...	40	8.7
332	gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH)...	40	8.7
333	gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH)...	40	8.7
334	gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH)...	40	8.7
335	gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH)...	40	8.7
336	gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH)...	40	8.7
337	gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH)...	40	8.7
338	gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH)...	40	8.7
339	gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH)...	40	8.7
340	gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH)...	40	8.7
341	gb|AF369748.1|AF369748 Populus deltoides tRNA-His gene, complete...	40	8.7
342	gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrog...	40	8.7
343	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	40	8.7
344	gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein...	40	8.7
345	gb|AC079905.28| Homo sapiens 12 BAC RP11-813P10 (Roswell Park Ca...	40	8.7
346	gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clo...	40	8.7
347	gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome...	40	8.7
348	emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on ch...	40	8.7
349	gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se...	40	8.7
350	gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21...	40	8.7
351	gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' n...	40	8.7
352	gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' n...	40	8.7
353	gb|DQ006176.1| Carex cephalophora voucher Lea 1483 US PsbA (psbA...	40	8.7
354	emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chr...	40	8.7
355	gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complet...	40	8.7
356	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	40	8.7
357	gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold	40	8.7
358	emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, co...	40	8.7
359	emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chro...	40	8.7
360	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	40	8.7

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1047 bits (528), Expect = 0.0
 Identities = 581/604 (96%)
 Strand = Plus / Plus

                                                                         
Query: 33    agatttctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaa 92
             ||||||||||||||||||||||||||||||||||||||||||||        || |||||
Sbjct: 79877 agatttctttactatatttagtacaattgttatatgacacatgcttttttttatggggaa 79936

                                                                         
Query: 93    actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 152
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79937 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 79996

                                                                         
Query: 153   tttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgc 212
             ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79997 tttagtaataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgc 80056

                                                                         
Query: 213   cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 272
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80057 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 80116

                                                                         
Query: 273   aacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaac 332
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 80117 aacagtttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaac 80176

                                                                         
Query: 333   agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 392
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80177 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 80236

                                                                         
Query: 393   tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 452
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80237 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 80296

                                                                         
Query: 453   ctttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttattt 512
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80297 ctttactagtttgaaacttgtcataaataaggttattccccgcctacctttactttattt 80356

                                                                         
Query: 513   tgaatcnnnnnnnncttcttaatctttctattcagaattcagttaacgacgagatttagt 572
             ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80357 tgaatcttttttttcttcttaatctttctattcagaattcagttaacgacgagatttagt 80416

                                                                         
Query: 573   atcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaattt 632
             ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 80417 atcctttcttgcattttcataactcgtgaaatgccgagtaggcacgaattcccccaattt 80476

                 
Query: 633   gcga 636
             ||||
Sbjct: 80477 gcga 80480



 Score =  202 bits (102), Expect = 1e-48
 Identities = 108/110 (98%)
 Strand = Plus / Minus

                                                                          
Query: 527    cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 586
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134523 cttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcat 134464

                                                                
Query: 587    tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 134463 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 134414

---

>ref|XM_481016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
           ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 749

                                                                       
Query: 64  atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
           ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689

                                                                       
Query: 124 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629

                                                                       
Query: 184 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569

                                                                       
Query: 244 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
           |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509

                                                                       
Query: 304 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
           || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449

                                                                       
Query: 364 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
           || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389

                                                                       
Query: 424 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
           || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 388 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329

                             
Query: 484 tttattccccgcctacct 501
            ||||||||||| |||||
Sbjct: 328 gttattccccgcttacct 311



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 186

---

>ref|XM_481017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
           ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 749

                                                                       
Query: 64  atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
           ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689

                                                                       
Query: 124 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629

                                                                       
Query: 184 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569

                                                                       
Query: 244 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
           |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509

                                                                       
Query: 304 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
           || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449

                                                                       
Query: 364 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
           || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389

                                                                       
Query: 424 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
           || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 388 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329

                             
Query: 484 tttattccccgcctacct 501
            ||||||||||| |||||
Sbjct: 328 gttattccccgcttacct 311



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 186

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 80109 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 80167

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 80168 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80227

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 80228 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80287

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80288 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80347

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 80348 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80407

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 80408 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80467

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 80468 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80527

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 80528 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80587

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 80588 gttattccccgcttacct 80605



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134426



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 80730

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 80109 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 80167

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 80168 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80227

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 80228 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80287

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80288 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80347

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 80348 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80407

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 80408 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80467

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 80468 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80527

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 80528 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80587

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 80588 gttattccccgcttacct 80605



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134529 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134470

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134469 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134426



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80627 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80686

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 80687 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 80730

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 80052 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 80110

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 80111 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80170

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 80171 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80230

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80231 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80290

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 80291 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80350

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 80351 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80410

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 80411 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80470

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 80471 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80530

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 80531 gttattccccgcttacct 80548



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134478 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134419

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134418 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134375



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80572 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80631

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 80632 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 80675

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 80097 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 80155

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 80156 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80215

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 80216 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80275

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80276 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80335

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 80336 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80395

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 80396 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80455

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 80456 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80515

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 80516 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80575

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 80576 gttattccccgcttacct 80593



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134503 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134444

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134443 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134400



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80615 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80674

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 80675 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 80718

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 70645 aaatcttagatggat-ctaaagattattttgatttctttactatatttagtacaattgtt 70587

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 70586 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 70527

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 70526 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 70467

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 70466 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 70407

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 70406 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 70347

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 70346 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 70287

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 70286 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 70227

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 70226 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 70167

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 70166 gttattccccgcttacct 70149



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 70125 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 70066

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 70065 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 70022



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 53236 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 53295

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 53296 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 53339

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                           
Query: 4       aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
               ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 9212532 aaatcttagatggat-ctaaagattattttgatttctttactatatttagtacaattgtt 9212590

                                                                           
Query: 64      atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
               ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 9212591 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9212650

                                                                           
Query: 124     ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
               ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9212651 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9212710

                                                                           
Query: 184     tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9212711 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9212770

                                                                           
Query: 244     gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
               |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 9212771 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9212830

                                                                           
Query: 304     tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
               || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 9212831 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9212890

                                                                           
Query: 364     actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
               || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 9212891 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9212950

                                                                           
Query: 424     cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
               || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 9212951 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9213010

                                 
Query: 484     tttattccccgcctacct 501
                ||||||||||| |||||
Sbjct: 9213011 gttattccccgcttacct 9213028



 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                           
Query: 4       aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
               ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 9189572 aaatcttagatggat-ctaaagattattttgatttctttactatatttagtacaattgtt 9189514

                                                                           
Query: 64      atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
               ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 9189513 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9189454

                                                                           
Query: 124     ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
               ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9189453 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9189394

                                                                           
Query: 184     tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9189393 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9189334

                                                                           
Query: 244     gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
               |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 9189333 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9189274

                                                                           
Query: 304     tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
               || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 9189273 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9189214

                                                                           
Query: 364     actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
               || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 9189213 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9189154

                                                                           
Query: 424     cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
               || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 9189153 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9189094

                                 
Query: 484     tttattccccgcctacct 501
                ||||||||||| |||||
Sbjct: 9189093 gttattccccgcttacct 9189076



 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                           
Query: 4       aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
               ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 9112619 aaatcttagatggat-ctaaagattattttgatttctttactatatttagtacaattgtt 9112561

                                                                           
Query: 64      atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
               ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 9112560 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9112501

                                                                           
Query: 124     ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
               ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9112500 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9112441

                                                                           
Query: 184     tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9112440 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9112381

                                                                           
Query: 244     gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
               |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 9112380 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9112321

                                                                           
Query: 304     tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
               || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 9112320 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9112261

                                                                           
Query: 364     actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
               || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 9112260 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9112201

                                                                           
Query: 424     cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
               || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 9112200 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9112141

                                 
Query: 484     tttattccccgcctacct 501
                ||||||||||| |||||
Sbjct: 9112140 gttattccccgcttacct 9112123



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23629454 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 23629513

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 23629514 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 23629557



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                           
Query: 533     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9213052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9213111

                                                           
Query: 593     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
               ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 9213112 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 9213155



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                           
Query: 533     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9189052 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9188993

                                                           
Query: 593     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
               ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 9188992 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 9188949



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                           
Query: 533     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9112099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9112040

                                                           
Query: 593     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
               ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 9112039 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 9111996



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                           
Query: 533     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9095210 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9095269

                                                           
Query: 593     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
               ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 9095270 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 9095313



 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                            
Query: 215      aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 274
                ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426

                                               
Query: 275      cagtttcctcgtagtaacgccaccgaatctc 305
                 |||||| |||||||||||||| ||||||||
Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 176      tgtcgaaatccctataatgagttgcatttg 205
                ||||||||||| |||||||||| |||||||
Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 533      aatctttctattcagaattcagtta 557
                ||||||||||||| |||||||||||
Sbjct: 21201144 aatctttctattctgaattcagtta 21201168



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 592     taactcgtaaaatgccgagtaggcacgaattct 624
               |||||||| ||||||||||| || |||||||||
Sbjct: 2074046 taactcgtgaaatgccgagttggtacgaattct 2074014

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                           
Query: 4       aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
               ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 9256962 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 9256904

                                                                           
Query: 64      atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
               ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 9256903 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 9256844

                                                                           
Query: 124     ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
               ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9256843 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 9256784

                                                                           
Query: 184     tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
               |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9256783 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 9256724

                                                                           
Query: 244     gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
               |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 9256723 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 9256664

                                                                           
Query: 304     tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
               || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 9256663 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 9256604

                                                                           
Query: 364     actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
               || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 9256603 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 9256544

                                                                           
Query: 424     cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
               || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 9256543 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 9256484

                                 
Query: 484     tttattccccgcctacct 501
                ||||||||||| |||||
Sbjct: 9256483 gttattccccgcttacct 9256466



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22318512 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 22318571

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 22318572 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 22318615



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                           
Query: 533     aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9256444 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 9256385

                                                           
Query: 593     aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
               ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 9256384 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 9256341

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 68175 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 68117

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 68116 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 68057

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 68056 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 67997

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 67996 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 67937

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 67936 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 67877

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 67876 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 67817

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 67816 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 67757

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 67756 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 67697

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 67696 gttattccccgcttacct 67679



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67657 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 67598

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 67597 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 67554

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  662 bits (334), Expect = 0.0
 Identities = 456/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 80049 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 80107

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 80108 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 80167

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 80168 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 80227

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 80228 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 80287

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 80288 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 80347

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 80348 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 80407

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 80408 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 80467

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 80468 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 80527

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 80528 gttattccccgcttacct 80545



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134471 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134412

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134411 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134368



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80568 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 80627

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 80628 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 80671

---

>ref|XM_479425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2380

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
           ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 714 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 656

                                                                       
Query: 64  atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
           ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 655 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 596

                                                                       
Query: 124 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 595 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 536

                                                                       
Query: 184 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
           |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 535 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 476

                                                                       
Query: 244 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
           |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 475 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 416

                                                                       
Query: 304 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
           || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 415 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 356

                                                                       
Query: 364 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
           || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 355 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 296

                                                                       
Query: 424 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
           || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 295 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 236

                             
Query: 484 tttattccccgcctacct 501
            ||||||||||| |||||
Sbjct: 235 gttattccccgcttacct 218



 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 197 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 138

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 137 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 94

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                            
Query: 4        aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
                ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 14453591 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 14453533

                                                                            
Query: 64       atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
                ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 14453532 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 14453473

                                                                            
Query: 124      ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 14453472 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 14453413

                                                                            
Query: 184      tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
                |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14453412 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 14453353

                                                                            
Query: 244      gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
                |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 14453352 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 14453293

                                                                            
Query: 304      tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
                || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 14453292 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 14453233

                                                                            
Query: 364      actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
                || |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 14453232 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 14453173

                                                                            
Query: 424      cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
                || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 14453172 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 14453113

                                  
Query: 484      tttattccccgcctacct 501
                 ||||||||||| |||||
Sbjct: 14453112 gttattccccgcttacct 14453095



 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                            
Query: 92       aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
                |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655

                                                                            
Query: 152      ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
                ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595

                                                                            
Query: 212      ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
                |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535

                                                                            
Query: 272      taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
                |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475

                                                                            
Query: 332      cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
                | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415

                                                                            
Query: 392      ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
                |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355

                                                                  
Query: 452      actttactagtttgaaacttgtcataaataagtttattccccgcctacct 501
                ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 11893354 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 11893305



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14453073 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14453014

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 14453013 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 14452970



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11893284 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11893225

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 11893224 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 11893181



 Score =  111 bits (56), Expect = 3e-21
 Identities = 69/72 (95%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                            
Query: 4        aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
                ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 11893799 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 11893741

                            
Query: 64       atatgacacatg 75
                ||||||||||||
Sbjct: 11893740 atatgacacatg 11893729

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                            
Query: 4        aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
                ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 27925582 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 27925640

                                                                            
Query: 64       atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
                ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 27925641 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 27925700

                                                                            
Query: 124      ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 27925701 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 27925760

                                                                            
Query: 184      tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
                |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 27925761 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 27925820

                                                                            
Query: 244      gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
                |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 27925821 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 27925880

                                                                            
Query: 304      tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
                || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 27925881 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 27925940

                                                                            
Query: 364      actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
                || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 27925941 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 27926000

                                                                            
Query: 424      cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
                || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 27926001 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 27926060

                                  
Query: 484      tttattccccgcctacct 501
                 ||||||||||| |||||
Sbjct: 27926061 gttattccccgcttacct 27926078



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14191145 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 14191086

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 14191085 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 14191042



 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 27926099 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 27926158

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 27926159 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 27926202



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                            
Query: 160      atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 219
                ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825

                       
Query: 220      accaact 226
                |||||||
Sbjct: 10159824 accaact 10159818



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                            
Query: 253      ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 312
                ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750

                                                                      
Query: 313      actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 365
                |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 88940 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 88998

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 88999 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 89058

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 89059 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 89118

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 89119 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 89178

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 89179 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 89238

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 89239 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 89298

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 89299 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 89358

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 89359 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 89418

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 89419 gttattccccgcttacct 89436



 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 89457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 89516

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 89517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 89560

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 14916 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 14974

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 14975 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 15034

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 15035 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 15094

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 15095 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagat 15154

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 15155 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 15214

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 15215 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 15274

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 15275 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 15334

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 15335 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 15394

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 15395 gttattccccgcttacct 15412



 Score =  151 bits (76), Expect = 3e-33
 Identities = 97/104 (93%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 15433 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttacactttcat 15492

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 15493 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 15536

---

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                          
Query: 4      aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
              ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 145394 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 145336

                                                                          
Query: 64     atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
              ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 145335 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 145276

                                                                          
Query: 124    ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
              ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 145275 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 145216

                                                                          
Query: 184    tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
              |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 145215 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 145156

                                                                          
Query: 244    gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
              |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 145155 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 145096

                                                                          
Query: 304    tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
              || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 145095 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 145036

                                                                          
Query: 364    actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
              || |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 145035 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 144976

                                                                          
Query: 424    cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
              || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 144975 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 144916

                                
Query: 484    tttattccccgcctacct 501
               ||||||||||| |||||
Sbjct: 144915 gttattccccgcttacct 144898



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144876 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 144817

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 144816 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 144773

---

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 53156 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 53098

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 53097 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 53038

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 53037 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 52978

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 52977 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 52918

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 52917 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 52858

                                                                         
Query: 304   tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
             || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 52857 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 52798

                                                                         
Query: 364   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
             || |  |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 52797 acccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagccca 52738

                                                                         
Query: 424   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
             || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 52737 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 52678

                               
Query: 484   tttattccccgcctacct 501
              ||||||||||| |||||
Sbjct: 52677 gttattccccgcttacct 52660



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 52638 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 52579

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 52578 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 52535

---

>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full
           insert sequence
          Length = 2475

 Score =  654 bits (330), Expect = 0.0
 Identities = 455/498 (91%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
           ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 749

                                                                       
Query: 64  atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
           ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 748 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 689

                                                                       
Query: 124 ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 688 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 629

                                                                       
Query: 184 tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 628 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 569

                                                                       
Query: 244 gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
           |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 568 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 509

                                                                       
Query: 304 tcgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 363
           || || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 508 tcatccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 449

                                                                       
Query: 364 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 423
           || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 448 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 389

                                                                       
Query: 424 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
           || ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 388 ctcttcttcttccttatcctaggggtatactttaccagtttgaaacttgtcataaataag 329

                             
Query: 484 tttattccccgcctacct 501
            ||||||||||| |||||
Sbjct: 328 gttattccccgcttacct 311



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 289 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 230

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 229 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 186

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  648 bits (327), Expect = 0.0
 Identities = 456/499 (91%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 78290 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 78348

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 78349 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 78408

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 78409 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 78468

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 78469 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 78528

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 78529 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 78588

                                                                         
Query: 304   tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 362
             || || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||
Sbjct: 78589 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 78648

                                                                         
Query: 363   aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
             ||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 78649 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 78708

                                                                         
Query: 423   acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 482
             ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 78709 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 78768

                                
Query: 483   gtttattccccgcctacct 501
             | ||||||||||| |||||
Sbjct: 78769 ggttattccccgcttacct 78787



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 78810 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 78869

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 78870 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 78913

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  648 bits (327), Expect = 0.0
 Identities = 456/499 (91%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 12354 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 12412

                                                                         
Query: 64    atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
             ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 12413 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 12472

                                                                         
Query: 124   ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 12473 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 12532

                                                                         
Query: 184   tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 12533 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 12592

                                                                         
Query: 244   gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
             |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 12593 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 12652

                                                                         
Query: 304   tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 362
             || || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||
Sbjct: 12653 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 12712

                                                                         
Query: 363   aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
             ||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 12713 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 12772

                                                                         
Query: 423   acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 482
             ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 12773 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 12832

                                
Query: 483   gtttattccccgcctacct 501
             | ||||||||||| |||||
Sbjct: 12833 ggttattccccgcttacct 12851



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12874 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 12933

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 12934 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 12977

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  648 bits (327), Expect = 0.0
 Identities = 456/499 (91%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                            
Query: 4        aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
                ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 10371898 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 10371956

                                                                            
Query: 64       atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
                ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 10371957 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 10372016

                                                                            
Query: 124      ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 10372017 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 10372076

                                                                            
Query: 184      tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
                |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10372077 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 10372136

                                                                            
Query: 244      gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
                |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 10372137 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 10372196

                                                                            
Query: 304      tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 362
                || || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||
Sbjct: 10372197 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 10372256

                                                                            
Query: 363      aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
                ||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 10372257 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 10372316

                                                                            
Query: 423      acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 482
                ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 10372317 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 10372376

                                   
Query: 483      gtttattccccgcctacct 501
                | ||||||||||| |||||
Sbjct: 10372377 ggttattccccgcttacct 10372395



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20816614 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20816673

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 20816674 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 20816717



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10372418 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10372477

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10372478 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 10372521



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10291881 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10291822

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10291821 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 10291778

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  648 bits (327), Expect = 0.0
 Identities = 456/499 (91%), Gaps = 2/499 (0%)
 Strand = Plus / Plus

                                                                            
Query: 4        aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
                ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 10377937 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 10377995

                                                                            
Query: 64       atatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttc 123
                ||||||||||||         || ||  |||||||||||||||| |||||||||||||| 
Sbjct: 10377996 atatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaattta 10378055

                                                                            
Query: 124      ttcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaa 183
                ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 10378056 ttcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaa 10378115

                                                                            
Query: 184      tccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagat 243
                |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10378116 tccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagat 10378175

                                                                            
Query: 244      gctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatc 303
                |||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||
Sbjct: 10378176 gctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatc 10378235

                                                                            
Query: 304      tcgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaa 362
                || || ||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||
Sbjct: 10378236 tcatccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaa 10378295

                                                                            
Query: 363      aactctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
                ||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 10378296 aacccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccc 10378355

                                                                            
Query: 423      acttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataa 482
                ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 10378356 actcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataa 10378415

                                   
Query: 483      gtttattccccgcctacct 501
                | ||||||||||| |||||
Sbjct: 10378416 ggttattccccgcttacct 10378434



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20827878 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 20827937

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 20827938 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 20827981



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10378457 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10378516

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10378517 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 10378560



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10297920 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 10297861

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 10297860 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 10297817

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153

                                                                         
Query: 332   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213

                                                                         
Query: 392   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270

                                                                         
Query: 452   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 511
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82271 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82330

              
Query: 512   t 512
             |
Sbjct: 82331 t 82331



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                          
Query: 528    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140376 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140317

                                                               
Query: 588    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 140316 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 140268



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                         
Query: 528   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82361 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82420

                                                              
Query: 588   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 82421 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 82469



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 69/74 (93%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     tcgaaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaatt 60
             |||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 81824 tcgaaatcttagattgat-ctaaagattattttgatttctttactatatttagtacaatt 81882

                           
Query: 61    gttatatgacacat 74
             ||||||| ||||||
Sbjct: 81883 gttatattacacat 81896

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  585 bits (295), Expect = e-164
 Identities = 390/421 (92%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183

                                                                         
Query: 332   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243

                                                                         
Query: 392   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300

                                                                         
Query: 452   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 511
             ||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 82301 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82360

              
Query: 512   t 512
             |
Sbjct: 82361 t 82361



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                          
Query: 528    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 140446 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 140387

                                                               
Query: 588    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 140386 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 140338



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                         
Query: 528   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 82391 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 82450

                                                              
Query: 588   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 82451 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 82499



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 69/74 (93%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     tcgaaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaatt 60
             |||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 81854 tcgaaatcttagattgat-ctaaagattattttgatttctttactatatttagtacaatt 81912

                           
Query: 61    gttatatgacacat 74
             ||||||| ||||||
Sbjct: 81913 gttatattacacat 81926

---

>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22
          Length = 607

 Score =  571 bits (288), Expect = e-159
 Identities = 390/422 (92%), Gaps = 4/422 (0%)
 Strand = Plus / Minus

                                                                       
Query: 92  aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 150
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422

                                                                       
Query: 151 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
           |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362

                                                                       
Query: 211 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302

                                                                       
Query: 271 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 330
           ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242

                                                                       
Query: 331 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 390
           ||||||||| | || |||||||||||||||||||| |  ||||| |||||||||||||||
Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182

                                                                       
Query: 391 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 450
           ||||||||||| ||||||||||| || |||||    ||||||||||||||||||||| ||
Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125

                                                                       
Query: 451 tactttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttat 510
           |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 124 tactttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttat 65

             
Query: 511 tt 512
           ||
Sbjct: 64  tt 63



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgaaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaatt 60
           |||||||||||||| ||| ||||||   |||| |||||||||||||||||||||||||||
Sbjct: 571 tcgaaatcttagattgat-ctaaagaccattttgatttctttactatatttagtacaatt 513

                         
Query: 61  gttatatgacacat 74
           ||||||| ||||||
Sbjct: 512 gttatattacacat 499



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 528 ttcttaatctttctattcagaattcagttaacg 560
           |||| ||||||||||||| ||||||| ||||||
Sbjct: 33  ttctgaatctttctattctgaattcaattaacg 1

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                        
Query: 92   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112

                                                                        
Query: 152  ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
            ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172

                                                                        
Query: 212  ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232

                                                                        
Query: 272  taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
            |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292

                                                                        
Query: 332  cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
            |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352

                                                                        
Query: 392  ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
            |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409

                                                                        
Query: 452  actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 511
            ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 3410 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 3469

             
Query: 512  t 512
            |
Sbjct: 3470 t 3470



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                         
Query: 528   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 61618 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 61559

                                                              
Query: 588   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 61558 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 61510



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                        
Query: 528  ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
            |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 3500 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 3559

                                                             
Query: 588  ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 3560 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 3608



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 69/74 (93%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcgaaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaatt 60
            ||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2963 tcgaaattttagattgat-ctaaagattatttagatttctttactatatttagtacaatt 3021

                          
Query: 61   gttatatgacacat 74
            ||||||| ||||||
Sbjct: 3022 gttatattacacat 3035

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-156
 Identities = 387/421 (91%), Gaps = 3/421 (0%)
 Strand = Plus / Plus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849

                                                                         
Query: 332   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909

                                                                         
Query: 392   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966

                                                                         
Query: 452   actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 511
             ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| ||||||
Sbjct: 82967 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 83026

              
Query: 512   t 512
             |
Sbjct: 83027 t 83027



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                          
Query: 528    ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
              |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 141174 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 141115

                                                               
Query: 588    ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 141114 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 141066



 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                         
Query: 528   ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
             |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 83057 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 83116

                                                              
Query: 588   ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 83117 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 83165



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 69/74 (93%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     tcgaaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaatt 60
             ||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 82520 tcgaaattttagattgat-ctaaagattatttagatttctttactatatttagtacaatt 82578

                           
Query: 61    gttatatgacacat 74
             ||||||| ||||||
Sbjct: 82579 gttatattacacat 82592

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  539 bits (272), Expect = e-150
 Identities = 376/410 (91%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965

                                                                         
Query: 332   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 391
             | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905

                                                                         
Query: 392   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 451
             |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845

                                                               
Query: 452   actttactagtttgaaacttgtcataaataagtttattccccgcctacct 501
             ||||||| |||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 74844 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 74795



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 74774 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 74715

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 74714 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 74671



 Score =  111 bits (56), Expect = 3e-21
 Identities = 69/72 (95%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                         
Query: 4     aaatcttagatggatnctaaaggttatttagatttctttactatatttagtacaattgtt 63
             ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 75289 aaatcttagatggat-ctaaagattatttcgatttctttactatatttagtacaattgtt 75231

                         
Query: 64    atatgacacatg 75
             ||||||||||||
Sbjct: 75230 atatgacacatg 75219

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 41       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 100
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467

                                                                            
Query: 101      ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 160
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407

                                                                            
Query: 161      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 220
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347

                                                                            
Query: 221      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 280
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287

                                                                            
Query: 281      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 340
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227

                                                                            
Query: 341      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 398
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169

                                                                            
Query: 399      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 458
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109

                                                           
Query: 459      tagtttgaaacttgtcataaataagtttattccccgcctacct 501
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18328108 cagtttgaaacttgtcataaataagattattccccgcttacct 18328066



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11412131 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11412190

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 11412191 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 11412234

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Minus

                                                                            
Query: 41       ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 100
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788

                                                                            
Query: 101      ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 160
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728

                                                                            
Query: 161      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 220
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668

                                                                            
Query: 221      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 280
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608

                                                                            
Query: 281      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 340
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548

                                                                            
Query: 341      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 398
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490

                                                                            
Query: 399      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 458
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430

                                                           
Query: 459      tagtttgaaacttgtcataaataagtttattccccgcctacct 501
                 |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 18254429 cagtttgaaacttgtcataaataagattattccccgcttacct 18254387



 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 533      aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
                ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11411802 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 11411861

                                                            
Query: 593      aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
                ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 11411862 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 11411905

---

>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 177034

 Score =  462 bits (233), Expect = e-127
 Identities = 405/463 (87%), Gaps = 4/463 (0%)
 Strand = Plus / Plus

                                                                         
Query: 41    ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 100
             ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527

                                                                         
Query: 101   ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 160
             |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587

                                                                         
Query: 161   tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 220
             |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647

                                                                         
Query: 221   ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 280
             ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707

                                                                         
Query: 281   cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 340
             | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767

                                                                         
Query: 341   ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 398
             ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825

                                                                         
Query: 399   tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 458
             ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885

                                                        
Query: 459   tagtttgaaacttgtcataaataagtttattccccgcctacct 501
              |||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 42886 cagtttgaaacttgtcataaataagattattccccgcttacct 42928

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 170    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 229
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590

                                                                          
Query: 230    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 289
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650

                      
Query: 290    aacgccac 297
              || |||||
Sbjct: 212651 aaggccac 212658

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 170    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 229
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612

                                                                          
Query: 230    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 289
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672

                      
Query: 290    aacgccac 297
              || |||||
Sbjct: 553673 aaggccac 553680

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 170    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 229
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889

                                                                          
Query: 230    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 289
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949

                      
Query: 290    aacgccac 297
              || |||||
Sbjct: 456950 aaggccac 456957

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  182 bits (92), Expect = 9e-43
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 170    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 229
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124

                                                                          
Query: 230    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 289
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184

                      
Query: 290    aacgccac 297
              || |||||
Sbjct: 230185 aaggccac 230192

---

>gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 597

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA intergenic spacer,
           complete sequence; chloroplast
          Length = 598

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 186

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 187 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 230

---

>gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 264

---

>gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  182 bits (92), Expect = 9e-43
 Identities = 101/104 (97%)
 Strand = Plus / Plus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcattttcat 220

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 221 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 264

---

>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1
          Length = 2729

 Score =  176 bits (89), Expect = 6e-41
 Identities = 108/114 (94%), Gaps = 4/114 (3%)
 Strand = Plus / Plus

                                                                        
Query: 527  cttcttaatctttctattcagaat----tcagttaacgacgagatttagtatcctttctt 582
            ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 2411 cttcttaatctttctattcagaatctgatcagttaacgacgagatttagtatcctttctt 2470

                                                                  
Query: 583  gcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 2471 gcattttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 2524

---

>gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer, chloroplast
           sequence
          Length = 585

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 448 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 389

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 388 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 340

---

>gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 328

---

>gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 546

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 388

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 387 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 339

---

>gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 523

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 361

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 360 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 312

---

>gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 540

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 385

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 384 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 336

---

>gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 328

---

>gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 435 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 376

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 375 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 327

---

>gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 508

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 300

---

>gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 330

---

>gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 479

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 349

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 348 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 300

---

>gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, partial sequence; and
           rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, partial sequence;
           and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 299

---

>gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  176 bits (89), Expect = 6e-41
 Identities = 104/109 (95%)
 Strand = Plus / Plus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 147 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 206

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 207 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 255

---

>dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0022
          Length = 332

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12),
           strain:W0067
          Length = 332

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 63

---

>gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 542

 Score =  168 bits (85), Expect = 1e-38
 Identities = 103/109 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgggatttagtatcctttcttgcact 378

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 537

 Score =  168 bits (85), Expect = 1e-38
 Identities = 100/105 (95%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 378

                                                        
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaattt 632
           |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 377 ttcataactcgtgaaatgccgagtaggcacgaattcccccaattt 333

---

>gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA (psbA) gene,
           partial cds; psbA-trnH intergenic spacer, complete
           sequence; and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 612

 Score =  168 bits (85), Expect = 1e-38
 Identities = 103/109 (94%)
 Strand = Plus / Plus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 148 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 207

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 208 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 256

---

>dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0001
          Length = 333

 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1220
          Length = 333

 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12),
           strain:W0604
          Length = 333

 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1228
          Length = 333

 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer, partial
           sequence; and rpl19 gene, complete cds; chloroplast
          Length = 494

 Score =  167 bits (84), Expect = 6e-38
 Identities = 102/108 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 407 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 348

                                                           
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 347 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 300

---

>gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 627

 Score =  165 bits (83), Expect = 2e-37
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 174 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 233

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 234 aatgccgagtaggcacgaattcccccaatttgcga 268

---

>gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  165 bits (83), Expect = 2e-37
 Identities = 92/95 (96%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 538

 Score =  163 bits (82), Expect = 9e-37
 Identities = 104/110 (94%), Gaps = 1/110 (0%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 586
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                             
Query: 587 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  163 bits (82), Expect = 9e-37
 Identities = 104/110 (94%), Gaps = 1/110 (0%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 586
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 438 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                             
Query: 587 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 329

---

>gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 633

 Score =  163 bits (82), Expect = 9e-37
 Identities = 88/90 (97%)
 Strand = Plus / Plus

                                                                       
Query: 547 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 175 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgc 234

                                         
Query: 607 cgagtaggcacgaattctcccaatttgcga 636
           ||||||||||||||||| ||||||||||||
Sbjct: 235 cgagtaggcacgaattcccccaatttgcga 264

---

>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19
          Length = 411

 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 337 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 278

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 277 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 229



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 468 acttgtcataaataagtttattccccgcctacctttactttattt 512
           |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 411 acttgtcataaataaggttattacccgcctacctttactttattt 367

---

>gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 543

 Score =  161 bits (81), Expect = 3e-36
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 442 ttctgaatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 383

                                                       
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatt 631
           |||||||||||| ||||||||||||||||||||| | |||||||
Sbjct: 382 ttcataactcgtgaaatgccgagtaggcacgaatncccccaatt 339

---

>gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 614

 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |
Sbjct: 150 ttctgaatctttctattctgaattcaattaacgacgagatttagtatcctttcttgtact 209

                                                            
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 210 ttcataactcgtgaaatgccgagtaggcacgaattcccccaatttgcga 258

---

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 72135 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 72194

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 72195 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 72238

---

>gb|AF527485.1| Chloroplast transformation vector pVSR326, complete sequence
          Length = 9152

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                        
Query: 533  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 4176

                                                        
Query: 593  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 4177 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 4220

---

>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
             sequence
          Length = 178022

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 79013 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 79072

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 79073 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 79116

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 73206 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 73147

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 73146 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 73103

---

>gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 535

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 436 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 377

                                                           
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 376 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 329

---

>gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 533

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                           
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 331

---

>gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 535

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcatt 587
           |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttgcact 379

                                                           
Query: 588 ttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 378 ttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 331

---

>dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR region (RCt12),
           strain:SL10
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL8
          Length = 337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt12),
           strain:2001-SL3
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:105138
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:104154
          Length = 333

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W2199
          Length = 336

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:103812
          Length = 334

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:103887
          Length = 333

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:105267
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:103318
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101410
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:101397
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1635
          Length = 336

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12),
           strain:W1625
          Length = 334

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1514
          Length = 333

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1169
          Length = 334

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR region (RCt12),
           strain:W0652
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0120
          Length = 336

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1499
          Length = 337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12),
           strain:W1183
          Length = 336

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2078
          Length = 334

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1421
          Length = 337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W2099
          Length = 334

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing SSR region
           (RCt12), strain:W1650
          Length = 337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR region (RCt12)
          Length = 336

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12),
           strain:W0157
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt12),
           strain:Tog5923
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1620
          Length = 332

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12),
           strain:W1345
          Length = 332

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttcttttctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgacgagtaggcacgaattcccccaatttgcga 63

---

>dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W0048
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12),
           strain:W1639
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W1480B
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR region (RCt12),
           strain:W0018
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12),
           strain:W0613
          Length = 335

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W1564
          Length = 337

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0043
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12),
           strain:W1525
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0614
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:NIAS WBC6
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12),
           strain:W0015
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1213
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12),
           strain:W1181
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12),
           strain:W1337
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12),
           strain:W0002
          Length = 338

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                       
Query: 533 aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 166 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 107

                                                       
Query: 593 aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
           ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 106 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 63

---

>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, ribosomal protein L22 (rpL22) gene,
            5' end, transfer RNA-Ile and -His genes
          Length = 2789

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                        
Query: 533  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                        
Query: 593  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 2510



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 441  cctagggatatactttactagtttgaaacttgtcataaataagtttattccccgcctacc 500
            ||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtcataaataaggttattccccgcttacc 2730

             
Query: 501  t 501
            |
Sbjct: 2729 t 2729

---

>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0067K15
          Length = 160162

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 76026 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 75967

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 75966 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 75923

---

>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                         
Query: 533   aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15495 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 15554

                                                         
Query: 593   aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
             ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 15555 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 15598

---

>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0048G02
          Length = 155542

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 134888 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 134947

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 134948 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 134991

---

>dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F01, full
            insert sequence
          Length = 1123

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                        
Query: 533  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1117 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 1058

                                                        
Query: 593  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 1057 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 1014

---

>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, transfer RNA-Ile and -His genes and
            photosystem II (psbA) gene, 3' end
          Length = 2799

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                        
Query: 533  aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2613 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 2554

                                                        
Query: 593  aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
            ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 2553 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 2510

---

>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167806

 Score =  159 bits (80), Expect = 1e-35
 Identities = 98/104 (94%)
 Strand = Plus / Minus

                                                                          
Query: 533    aatctttctattcagaattcagttaacgacgagatttagtatcctttcttgcattttcat 592
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 124833 aatctttctattctgaattcagttaacgacgagatttagtatcctttcttgcactttcat 124774

                                                          
Query: 593    aactcgtaaaatgccgagtaggcacgaattctcccaatttgcga 636
              ||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 124773 aactcgtgaaatgccgagttggtacgaattcccccaatttgcga 124730

---

>gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacgacgagatttagtatcttttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, partial cds; and
           psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 638

 Score =  157 bits (79), Expect = 5e-35
 Identities = 91/95 (95%)
 Strand = Plus / Plus

                                                                       
Query: 542 attcagaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaa 601
           |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 175 attctgaattcagttaacggcgagatttagtatcctttcttgcattttcataactcgtga 234

                                              
Query: 602 aatgccgagtaggcacgaattctcccaatttgcga 636
           |||||||||||||||||||||| ||||||||||||
Sbjct: 235 aatgccgagtaggcacgaattcccccaatttgcga 269

---

>gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 537

 Score =  145 bits (73), Expect = 2e-31
 Identities = 101/109 (92%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 586
           |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 441 ttctgaatgtttctattctgaattcagttaacgacgagatttagtatcctttcttggcac 382

                                                            
Query: 587 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           ||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 381 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 333

---

>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                         
Query: 215   aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 274
             ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213

                                            
Query: 275   cagtttcctcgtagtaacgccaccgaatctc 305
              |||||| |||||||||||||| ||||||||
Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182

---

>gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 538

 Score =  139 bits (70), Expect = 1e-29
 Identities = 86/90 (95%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 547 gaattcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgc 606
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 414 gaattcagt-aacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgc 356

                                         
Query: 607 cgagtaggcacgaattctcccaatttgcga 636
           ||||||||||||||||| ||||||||||||
Sbjct: 355 cgagtaggcacgaattcccccaatttgcga 326

---

>gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 536

 Score =  137 bits (69), Expect = 5e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                       
Query: 528 ttcttaatctttctattcagaattcagttaacgacgagatttagtatcctttctt-gcat 586
           |||| ||| ||||||||  |||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 438 ttctgaatgtttctattttgaattcagttaacgacgagatttagtatcctttcttggcac 379

                                                            
Query: 587 tttcataactcgtaaaatgccgagtaggcacgaattctcccaatttgcg 635
           ||||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 378 tttcataactcgtgaaatgccgagtaggcacgaattcccctaatttgcg 330

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  133 bits (67), Expect = 8e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | | |||| || | ||||||||
Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| |||| |  | || || ||| || | | |||||||| |||
Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 86479 ataagcgtttcctcataggaacg 86501

---

>dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt12),
           strain:101232
          Length = 338

 Score =  133 bits (67), Expect = 8e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                       
Query: 550 ttcagttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccga 609
           |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 149 ttcagttaacgacgagatttagtatcttttcttgcactttcataactcgtgaaatgccga 90

                                      
Query: 610 gtaggcacgaattctcccaatttgcga 636
           |||||||| ||||| ||||||||||||
Sbjct: 89  gtaggcacaaattcccccaatttgcga 63

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 86232 ataagcgtttcctcataggaacg 86254

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 85357 ataagcgtttcctcataggaacg 85379

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 86230 ataagcgtttcctcataggaacg 86252

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| |||| |||||||||||||| |  ||||||
Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 86001 ataagcgtttcctcataggaacg 86023

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 85369 ataagcgtttcctcataggaacg 85391

---

>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 1015

 Score =  111 bits (56), Expect = 3e-21
 Identities = 200/248 (80%)
 Strand = Plus / Plus

                                                                       
Query: 92  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261

                                                                       
Query: 152 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
           ||||| |||| ||||||||| |||  |  ||  ||   | |||||| |||||||  ||||
Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321

                                                                       
Query: 212 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381

                                                                       
Query: 272 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441

                   
Query: 332 cagacata 339
           ||||||||
Sbjct: 442 cagacata 449



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 548 aattcagttaacgacgagatttagtatcctttcttgcat 586
           |||||| |||||||||||||||| |||| || |||||||
Sbjct: 589 aattcaattaacgacgagatttattatcgttccttgcat 627



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 608 gagtaggcacgaattctcccaattt 632
           |||||||| ||||||||||||||||
Sbjct: 643 gagtaggcgcgaattctcccaattt 667

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 85521 ataagcgtttcctcataggaacg 85543

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 85518 ataagcgtttcctcataggaacg 85540

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403

                                    
Query: 271   ataacagtttcctcgtagtaacg 293
             ||||  |||||||| ||| ||||
Sbjct: 85404 ataagcgtttcctcataggaacg 85426

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  103 bits (52), Expect = 7e-19
 Identities = 151/184 (82%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||||||||||||||||||| | ||||||||||  ||||||| |   |||||||| 
Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566

                                                                         
Query: 151   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 210
             |||||| |||| | |||||| | || || | ||||| |||  | | | |||||||| |||
Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626

                                                                         
Query: 211   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 270
             || ||||||||||| || || ||||||||| |||||||||| |||||||| |  ||||||
Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686

                 
Query: 271   ataa 274
             ||||
Sbjct: 85687 ataa 85690

---

>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic
           spacer and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 770

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 199 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
           |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| 
Sbjct: 57  gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116

                                                                       
Query: 259 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 318
           || | |||||||||||  |||||||| ||  |||| |  ||||| |  ||||  ||||||
Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176

                                
Query: 319 tgtgctttgaaaacagacata 339
           |||||||||||||||||||||
Sbjct: 177 tgtgctttgaaaacagacata 197



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 559 cgacgagatttagtatcctttcttgcat 586
           |||||||||||| |||| ||||||||||
Sbjct: 343 cgacgagatttattatcgtttcttgcat 370

---

>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1029

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 92  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278

                                                                       
Query: 152 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338

                                                                       
Query: 212 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398

                                                                       
Query: 272 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458

                   
Query: 332 cagacata 339
           ||||||||
Sbjct: 459 cagacata 466



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 607 cgagtaggcacgaattctcccaattt 632
           ||||||||| ||||||||||||||||
Sbjct: 664 cgagtaggcgcgaattctcccaattt 689

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 312     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 371
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351

                                                                  
Query: 372     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300

---

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                         
Query: 312   aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 371
             |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146

                                                                
Query: 372   gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
             |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 312     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 371
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466

                                                                  
Query: 372     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415

---

>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0032G22
          Length = 127365

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 160   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 219
             ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562

                    
Query: 220   accaact 226
             |||||||
Sbjct: 18561 accaact 18555



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                         
Query: 253   ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 312
             ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487

                                                                   
Query: 313   actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 365
             |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 157/194 (80%)
 Strand = Plus / Plus

                                                                         
Query: 100   cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 159
             ||||||||||||||| | ||||| |||||| |||||| |    ||||||| |||||| ||
Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423

                                                                         
Query: 160   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 219
             || | |||| | ||||  | |||| || ||| |||| | |||||||| ||||| ||||||
Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483

                                                                         
Query: 220   accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 279
             |||||||| || ||||||||| | |||||||| ||||| || |  ||||||||||  |||
Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543

                           
Query: 280   tcctcgtagtaacg 293
             ||||||||| ||||
Sbjct: 88544 tcctcgtaggaacg 88557

---

>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1060

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 92  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287

                                                                       
Query: 152 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347

                                                                       
Query: 212 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
           | ||||||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407

                                                                       
Query: 272 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467

                   
Query: 332 cagacata 339
           ||||||||
Sbjct: 468 cagacata 475



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 607 cgagtaggcacgaattctcccaattt 632
           ||||||||| ||||||||||||||||
Sbjct: 673 cgagtaggcgcgaattctcccaattt 698

---

>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 1172

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 92  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342

                                                                       
Query: 152 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
           ||| | |||| ||||||||| |||| |  ||  ||   | |||||| || ||||  ||||
Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402

                                                                       
Query: 212 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
           | ||| ||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462

                                                                       
Query: 272 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522

                   
Query: 332 cagacata 339
           ||||||||
Sbjct: 523 cagacata 530



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 608 gagtaggcacgaattctcccaattt 632
           |||||||| ||||||||||||||||
Sbjct: 771 gagtaggcgcgaattctcccaattt 795

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                         
Query: 199   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
             |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||||
Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296

                                                
Query: 259   aggttcagtatcataacagtttcctcgtagtaacg 293
             || |  ||||||||||  ||||| |||||| ||||
Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331

---

>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein
          Length = 5896

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                        
Query: 312  aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 371
            |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469

                                                               
Query: 372  gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 422
            |||||||| |||| |||||| ||| ||| | ||||| ||||||||||||||
Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 197/249 (79%)
 Strand = Plus / Plus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             |||||||||||  ||| |||||| | || || ||||  ||||||| || | |||||||||
Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||| |||||||| |||  |||| ||  |||  | |||  ||| | |||||||| ||||
Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             | ||||||||||  || || |||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             |||  |||||| | ||| |||| |  |||||||  ||||  |||||| ||||||||  | 
Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983

                      
Query: 332   cagacatag 340
             |||||||||
Sbjct: 84984 cagacatag 84992

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 199   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142

                                                
Query: 259   aggttcagtatcataacagtttcctcgtagtaacg 293
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 574      tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 633
                |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 34364792 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 34364851

                   
Query: 634      cga 636
                |||
Sbjct: 34364852 cga 34364854

---

>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 574   tcctttcttgcattttcataactcgtaaaatgccgagtaggcacgaattctcccaatttg 633
             |||||||||||| ||||||||||||| ||||||||||| || | |||||| |||||||||
Sbjct: 47136 tcctttcttgcactttcataactcgtgaaatgccgagttggtatgaattcccccaatttg 47195

                
Query: 634   cga 636
             |||
Sbjct: 47196 cga 47198

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 199   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371

                                                
Query: 259   aggttcagtatcataacagtttcctcgtagtaacg 293
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                         
Query: 143   tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 202
             |||||||||||||| |||| |||||||  ||||  |  ||| ||||||  ||| | ||||
Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369

                                                                         
Query: 203   ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 262
             |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| |
Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429

                         
Query: 263   tcagtatcataa 274
              |||||||||||
Sbjct: 89430 ccagtatcataa 89441



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 608   gagtaggcacgaattctcccaatttg 633
             |||||||| |||||||||||||||||
Sbjct: 89702 gagtaggcgcgaattctcccaatttg 89727

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 195/248 (78%)
 Strand = Plus / Plus

                                                                         
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 151
             |||||||||||||||| || ||| | || || ||||||||||| |  ||| ||||||| |
Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750

                                                                         
Query: 152   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 211
             ||||| |||| ||||| |   |||  |  ||| || ||| |||| | |||||||| ||||
Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810

                                                                         
Query: 212   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 271
             | |||||||| || |||||||| ||||||||||| | ||| ||||| || |  |||||||
Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870

                                                                         
Query: 272   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 331
             | |  | |||||| ||  |||| |  |||||||  ||||  |||||| ||||||||||||
Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930

                     
Query: 332   cagacata 339
             ||||||||
Sbjct: 85931 cagacata 85938

---

>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence
          Length = 813

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                       
Query: 143 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 202
           |||||||||||||| |||||| ||||||  ||| || |||| || |||  ||| | ||||
Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65

                                                                     
Query: 203 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 260
           |||| ||||| ||||||| ||| || || | ||||||| |||||||||| ||||||||
Sbjct: 64  ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7

---

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
           for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 199 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
           |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631

             
Query: 259 ag 260
           ||
Sbjct: 630 ag 629

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 199   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
             |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311

               
Query: 259   ag 260
             ||
Sbjct: 82312 ag 82313

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 199   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 258
             |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| 
Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437

                                                           
Query: 259   aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 304
             || |  ||||||||||  |||||||| ||| ||||||  |||||||
Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 91    aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 150
             |||||||| ||||||||||||||| | ||| ||||||| |||||||   || | ||||||
Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041

                                      
Query: 151   gctttagtaatgaataaattcgctt 175
             |||||| |||| | |||||| ||||
Sbjct: 83042 gctttactaatcactaaatttgctt 83066

---

>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0017D19, complete sequence
          Length = 142015

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 582   tgcattttcataactcgtaaaatgccgagt 611
             |||| |||||||||||||||||||||||||
Sbjct: 58206 tgcactttcataactcgtaaaatgccgagt 58177

---

>emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for D1 protein of photosystem
            II
          Length = 1428

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 527  cttcttaatctttctattcagaattc 552
            ||||||||||||||||||||||||||
Sbjct: 1403 cttcttaatctttctattcagaattc 1428

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 582      tgcattttcataactcgtaaaatgccgagt 611
                |||| |||||||||||||||||||||||||
Sbjct: 22627420 tgcactttcataactcgtaaaatgccgagt 22627391

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 582      tgcattttcataactcgtaaaatgccgagt 611
                |||| |||||||||||||||||||||||||
Sbjct: 22937331 tgcactttcataactcgtaaaatgccgagt 22937302

---

>gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding protein (psbA) gene, complete
            cds
          Length = 1430

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 527  cttcttaatctttctattcagaattc 552
            ||||||||||||||||||||||||||
Sbjct: 1405 cttcttaatctttctattcagaattc 1430

---

>emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene
          Length = 2190

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 527  cttcttaatctttctattcagaattc 552
            ||||||||||||||||||||||||||
Sbjct: 2165 cttcttaatctttctattcagaattc 2190

---

>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
             complete sequence
          Length = 155106

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 173   ctttgtcgaaatccctataatgagttgcatttg 205
             |||||| |||||||||||||||||| |||||||
Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 173     ctttgtcgaaatccctataatgagttgcatttg 205
               |||||| |||||||||||||||||| |||||||
Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                     
Query: 430     ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
               ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 4877979 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 4877926

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 92    aactacgtcctcgagctcgaggtctgaatttcttca 127
             ||||||||||||||||||||||| | ||||| ||||
Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541

---

>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 95  tacgtcctcgagctcgaggtct 116
           ||||||||||||||||||||||
Sbjct: 192 tacgtcctcgagctcgaggtct 171

---

>gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 608 gagtaggcacgaattctcccaatttg 633
           |||||||| |||||||||||||||||
Sbjct: 232 gagtaggcgcgaattctcccaatttg 207

---

>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene,
           partial cds
          Length = 221

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 95  tacgtcctcgagctcgaggtct 116
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene,
           partial cds
          Length = 231

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 95  tacgtcctcgagctcgaggtct 116
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene,
           partial cds
          Length = 216

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 95  tacgtcctcgagctcgaggtct 116
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 176   tgtcgaaatccctataatgagttgcatttg 205
             ||||||||||| |||||||||| |||||||
Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433

---

>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 430    ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 483
              ||||| ||||||| |||| | |||  |||| ||||||||||||||| |||||||
Sbjct: 150387 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 150334

---

>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein
           (nifH) gene, partial cds
          Length = 356

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  tacgtcctcgagctcgaggtc 115
           |||||||||||||||||||||
Sbjct: 198 tacgtcctcgagctcgaggtc 178

---

>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the
            complete plasmid sequence
          Length = 10370

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   acgtcctcgagctcgaggtct 116
            |||||||||||||||||||||
Sbjct: 8029 acgtcctcgagctcgaggtct 8009

---

>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gene, partial cds;
           chloroplast
          Length = 276

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 558 acgacgagatttagtatcctttcttgcat 586
           ||||||||||||| |||| ||||||||||
Sbjct: 276 acgacgagatttattatcgtttcttgcat 248

---

>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene,
           partial cds
          Length = 234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 93  acgtcctcgagctcgaggtct 73

---

>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene,
           partial cds
          Length = 249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  tacgtcctcgagctcgaggtc 115
           |||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtc 74

---

>gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogenase reductase
           (nifH) mRNA, partial cds
          Length = 324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (nifH) gene,
           partial cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (nifH) gene, partial
           cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, partial cds
          Length = 317

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 90  acgtcctcgagctcgaggtct 70

---

>gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW13 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>ref|XM_804647.1| Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS)
            protein (Tc00.1047053507555.80) partial mRNA
          Length = 2757

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 472  gtcataaataagtttattccccgcc 496
            ||||| |||||||||||||||||||
Sbjct: 1221 gtcatgaataagtttattccccgcc 1197

---

>gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, complete sequence
          Length = 205915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 339    agggatacgtttttgtgctttgaaa 363
              |||||||||||||||||| ||||||
Sbjct: 176607 agggatacgtttttgtgccttgaaa 176583

---

>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 533   aatctttctattcagaattcagtta 557
             ||||||||||||| |||||||||||
Sbjct: 14618 aatctttctattctgaattcagtta 14642

---

>emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERF-54B
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERF-44A
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 96  acgtcctcgagctcgaggtct 116
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,449,407
Number of Sequences: 3902068
Number of extensions: 6449407
Number of successful extensions: 136553
Number of sequences better than 10.0: 360
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134686
Number of HSP's gapped (non-prelim): 1761
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---