Clone Name | rbasd18p20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CPR4_ARATH (Q9SUS9) Probable cysteine proteinase At4g11320 precu... | 30 | 1.3 | 2 | CPR3_ARATH (Q9SUT0) Probable cysteine proteinase At4g11310 precu... | 30 | 1.3 | 3 | CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-) | 29 | 2.9 | 4 | CYSEP_RICCO (O65039) Vignain precursor (EC 3.4.22.-) (Cysteine e... | 29 | 2.9 |
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>CPR4_ARATH (Q9SUS9) Probable cysteine proteinase At4g11320 precursor (EC| 3.4.22.-) Length = 371 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 Query: 204 MRRGADGPRGLCGMAMYGAYPV 139 M R PRGLCG+AM +YP+ Sbjct: 338 MARNIANPRGLCGIAMRASYPL 359
>CPR3_ARATH (Q9SUT0) Probable cysteine proteinase At4g11310 precursor (EC| 3.4.22.-) Length = 364 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 Query: 204 MRRGADGPRGLCGMAMYGAYPV 139 M R PRGLCG+AM +YP+ Sbjct: 331 MARNIANPRGLCGIAMRASYPL 352
>CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-)| Length = 360 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 204 MRRGADGPRGLCGMAMYGAYPV 139 M+RG RG CG+AM +YP+ Sbjct: 324 MQRGISDKRGKCGIAMEASYPI 345
>CYSEP_RICCO (O65039) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase)| Length = 360 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 204 MRRGADGPRGLCGMAMYGAYPV 139 M RG GLCG+AM +YP+ Sbjct: 321 MERGISDKEGLCGIAMEASYPI 342 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,220,279 Number of Sequences: 219361 Number of extensions: 611419 Number of successful extensions: 1252 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1252 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)