>GH31_ORYSA (Q8LQM5) Probable indole-3-acetic acid-amido synthetase GH3.1 (EC|
           6.3.2.-) (Auxin-responsive GH3-like protein 1) (OsGH3-1)
          Length = 610

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 23/85 (27%), Positives = 42/85 (49%)
 Frame = -3

Query: 598 KADISEQTEIGQSVHVPSICFVDLHKLKVFHTLELGKGQDITAIALNKENTNLLVSTADK 419
           +AD+     +  S  + +I F++ H  ++ H +  G+        L+ E T+ +V  A  
Sbjct: 222 RADVLRVGAVFASGFLRAIHFLEKHWARLCHDIRTGE--------LDPEITDRVVRDA-V 272

Query: 418 GLMVFTDPALSLKVVDQMLRLGWEG 344
           G ++  DPAL+  + D+  R  WEG
Sbjct: 273 GRVLRADPALADAIEDECARASWEG 297

>DPOLB_RAT (P06766) DNA polymerase beta (EC 2.7.7.7) (EC 4.2.99.-)|
          Length = 334

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 316 GFLMTE-EVRPLPSQGVASDPLPSSSKQD 399
           GF + E  +RPL   GVA +PLP  S+QD
Sbjct: 289 GFTINEYTIRPLGVTGVAGEPLPVDSEQD 317

>DPOLB_MOUSE (Q8K409) DNA polymerase beta (EC 2.7.7.7) (EC 4.2.99.-)|
          Length = 334

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 316 GFLMTE-EVRPLPSQGVASDPLPSSSKQD 399
           GF + E  +RPL   GVA +PLP  S+QD
Sbjct: 289 GFTINEYTIRPLGVTGVAGEPLPVDSEQD 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,227,775
Number of Sequences: 219361
Number of extensions: 2081404
Number of successful extensions: 5513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5511
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7819576386
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)