ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18p12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
2gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5ref|NM_194601.1| Oryza sativa (japonica cultivar-group) putative... 123 8e-25
6gb|DQ377064.1| Oryza sativa (japonica cultivar-group) U1 small n... 123 8e-25
7gb|DQ377063.1| Oryza sativa (japonica cultivar-group) U1 small n... 123 8e-25
8gb|DQ377062.1| Oryza sativa (japonica cultivar-group) U1 small n... 123 8e-25
9dbj|AK100686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 8e-25
10dbj|AK059504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 8e-25
11dbj|AK121007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 5e-23
12gb|AY627768.1| Zea mays U1 snRNP mRNA, complete cds; alternative... 90 1e-14
13gb|AY627767.1| Zea mays U1 snRNP mRNA, complete cds; alternative... 90 1e-14
14gb|AY627766.1| Zea mays U1 snRNP mRNA, complete cds; alternative... 90 1e-14
15gb|AY627765.1| Zea mays U1 snRNP gene, complete cds; alternative... 90 1e-14
16gb|AY108570.1| Zea mays PCO063456 mRNA sequence 90 1e-14
17gb|DQ019633.1| Triticum aestivum U1 snRNP-interacting 70 kDa pro... 54 6e-04
18gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete se... 46 0.15
19gb|AC159716.6| Mus musculus 6 BAC RP23-80P15 (Roswell Park Cance... 46 0.15
20dbj|AP009046.1| Hyphantria cunea nucleopolyhedrovirus genomic DN... 46 0.15
21gb|AC154859.2| Mus musculus BAC clone RP23-14B14 from chromosome... 46 0.15
22ref|XM_632633.1| Dictyostelium discoideum hypothetical protein (... 42 2.3
23ref|XM_322654.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
24ref|XM_951751.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
25gb|AC146428.3| Pan troglodytes BAC clone RP43-22M18 from 7, comp... 42 2.3
26ref|XM_385689.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 42 2.3
27ref|XM_382910.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 2.3
28gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete... 42 2.3
29gb|AF038619.2| Caenorhabditis elegans cosmid F56A11, complete se... 42 2.3
30gb|AF067607.3| Caenorhabditis elegans cosmid C18H7, complete seq... 42 2.3
31emb|AL031589.10|HS11O7 Human DNA sequence from clone RP6-11O7 on... 42 2.3
32emb|BX034813.1|CNS08Z0X Single read from an extremity of a full-... 42 2.3
33emb|BX027358.1|CNS08T9U Single read from an extremity of a full-... 42 2.3
34gb|AY282786.1| Desulfovibrio gigas ech operon, complete sequence 42 2.3
35emb|BX009328.1|CNS08FD0 Single read from an extremity of a full-... 42 2.3
36emb|BX009327.1|CNS08FCZ Single read from an extremity of a full-... 42 2.3
37emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II B... 42 2.3
38emb|CR627316.1| Homo sapiens genomic DNA; cDNA DKFZp686O11128 (f... 42 2.3
39ref|NM_067549.2| Caenorhabditis elegans F56A11.6 (F56A11.6) mRNA... 42 2.3
40ref|NM_125120.2| Arabidopsis thaliana unknown protein AT5G57370 ... 40 9.1
41ref|XM_631879.1| Dictyostelium discoideum hypothetical protein (... 40 9.1
42ref|XM_482855.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.1
43ref|XM_507589.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 9.1
44ref|XM_507265.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 9.1
45gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, comp... 40 9.1
46ref|XM_841434.1| Trypanosoma brucei TREU927 hypothetical protein... 40 9.1
47emb|X14112.1|HE1CG Human herpesvirus 1 complete genome 40 9.1
48gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosom... 40 9.1
49emb|CR698862.2|CNS0G26Y Tetraodon nigroviridis full-length cDNA 40 9.1
50ref|XM_660953.1| Cryptosporidium hominis TU502 hypothetical prot... 40 9.1
51ref|XM_503754.1| Yarrowia lipolytica CLIB122, YALI0E09889g predi... 40 9.1
52gb|AY113928.1| Arabidopsis thaliana unknown protein (At5g57370) ... 40 9.1
53gb|AF370233.1| Arabidopsis thaliana unknown protein (At5g57370) ... 40 9.1
54gb|AF486184.1| Bovine papillomavirus type 3, complete genome 40 9.1
55emb|AJ620207.1| Bovine papillomavirus type 3 complete genome 40 9.1
56dbj|AB252867.1| Human herpesvirus 1 UL34 gene for virion protein... 40 9.1
57gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.1
58gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 9.1
59ref|NM_057497.3| Drosophila melanogaster grainy head CG5058-RD, ... 40 9.1
60ref|NM_057496.3| Drosophila melanogaster grainy head CG5058-RC, ... 40 9.1
61ref|NM_057495.3| Drosophila melanogaster grainy head CG5058-RB, ... 40 9.1
62ref|NM_057494.3| Drosophila melanogaster grainy head CG5058-RA, ... 40 9.1
63gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.1
64gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 40 9.1
65gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, r... 40 9.1
66ref|XM_624370.1| PREDICTED: Apis mellifera similar to ENSANGP000... 40 9.1
67dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
68emb|BX833689.1|CNS0A0AO Arabidopsis thaliana Full-length cDNA Co... 40 9.1
69gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, comple... 40 9.1
70gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 ... 40 9.1
71gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 9.1
72gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complet... 40 9.1
73gb|AY087116.1| Arabidopsis thaliana clone 31894 mRNA, complete s... 40 9.1
74gb|AC112229.4| Homo sapiens BAC clone RP13-1039J1 from 2, comple... 40 9.1
75dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
76dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.1
77dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
78ref|XM_557151.1| Anopheles gambiae str. PEST ENSANGP00000028277 ... 40 9.1
79ref|XM_316511.2| Anopheles gambiae str. PEST ENSANGP00000013488 ... 40 9.1
80dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
81dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
82dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
83emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in ... 40 9.1
84gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 9.1
85gb|AC004328.1|AC004328 Drosophila melanogaster, chromosome 2R, r... 40 9.1
86emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 9.1
87emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chr... 40 9.1
88emb|X15657.1|DMELF1 Drosophila mRNA for DNA-binding protein Elf1... 40 9.1
89emb|AL035312.1|DMC191D12 Drosophila melanogaster cosmid clone 19... 40 9.1
90gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 40 9.1
91gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 40 9.1 
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0092N12, complete sequence
          Length = 109198

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/158 (86%), Gaps = 4/158 (2%)
 Strand = Plus / Minus

                                                                         
Query: 131   aaaacttactgcagtaatcaagcttcagtcttt-tgctcttctgctgcttggtgatactg 189
             |||||||||||||| ||||||  ||||||  || ||||| || || ||||||||||||||
Sbjct: 15486 aaaacttactgcagcaatcaaatttcagttattgtgctcatcagcagcttggtgatactg 15427

                                                                         
Query: 190   gtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggttctgtgttg---gg 246
             |||||||||||| || |||||||| || || ||||||||||||||||||||||||   ||
Sbjct: 15426 gtagtcaccttcatcatatgcctcgccctcttcagggccttcaggttctgtgttgttagg 15367

                                                   
Query: 247   ttgtgcctgatagtactcatgctcatgtctctttgagc 284
             |||   ||||||||||||||||||||||| ||||||||
Sbjct: 15366 ttgcatctgatagtactcatgctcatgtcgctttgagc 15329



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                         
Query: 550   atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
             ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 15120 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 15061

                                                                         
Query: 604   acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
             ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15060 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 15001

                   
Query: 664   tctatg 669
              |||||
Sbjct: 15000 cctatg 14995



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                         
Query: 443   tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
             ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 15221 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 15162

                               
Query: 503   tcacggtgacgatcatga 520
             ||||| || |||||||||
Sbjct: 15161 tcacgatggcgatcatga 15144
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/158 (86%), Gaps = 4/158 (2%)
 Strand = Plus / Plus

                                                                          
Query: 131    aaaacttactgcagtaatcaagcttcagtcttt-tgctcttctgctgcttggtgatactg 189
              |||||||||||||| ||||||  ||||||  || ||||| || || ||||||||||||||
Sbjct: 987068 aaaacttactgcagcaatcaaatttcagttattgtgctcatcagcagcttggtgatactg 987127

                                                                          
Query: 190    gtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggttctgtgttg---gg 246
              |||||||||||| || |||||||| || || ||||||||||||||||||||||||   ||
Sbjct: 987128 gtagtcaccttcatcatatgcctcgccctcttcagggccttcaggttctgtgttgttagg 987187

                                                    
Query: 247    ttgtgcctgatagtactcatgctcatgtctctttgagc 284
              |||   ||||||||||||||||||||||| ||||||||
Sbjct: 987188 ttgcatctgatagtactcatgctcatgtcgctttgagc 987225



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Plus

                                                                          
Query: 550    atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
              ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 987434 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 987493

                                                                          
Query: 604    acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
              ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 987494 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 987553

                    
Query: 664    tctatg 669
               |||||
Sbjct: 987554 cctatg 987559



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 443    tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
              ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 987333 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 987392

                                
Query: 503    tcacggtgacgatcatga 520
              ||||| || |||||||||
Sbjct: 987393 tcacgatggcgatcatga 987410
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/158 (86%), Gaps = 4/158 (2%)
 Strand = Plus / Plus

                                                                          
Query: 131    aaaacttactgcagtaatcaagcttcagtcttt-tgctcttctgctgcttggtgatactg 189
              |||||||||||||| ||||||  ||||||  || ||||| || || ||||||||||||||
Sbjct: 987068 aaaacttactgcagcaatcaaatttcagttattgtgctcatcagcagcttggtgatactg 987127

                                                                          
Query: 190    gtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggttctgtgttg---gg 246
              |||||||||||| || |||||||| || || ||||||||||||||||||||||||   ||
Sbjct: 987128 gtagtcaccttcatcatatgcctcgccctcttcagggccttcaggttctgtgttgttagg 987187

                                                    
Query: 247    ttgtgcctgatagtactcatgctcatgtctctttgagc 284
              |||   ||||||||||||||||||||||| ||||||||
Sbjct: 987188 ttgcatctgatagtactcatgctcatgtcgctttgagc 987225



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Plus

                                                                          
Query: 550    atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
              ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 987434 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 987493

                                                                          
Query: 604    acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
              ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 987494 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 987553

                    
Query: 664    tctatg 669
               |||||
Sbjct: 987554 cctatg 987559



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 443    tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
              ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 987333 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 987392

                                
Query: 503    tcacggtgacgatcatga 520
              ||||| || |||||||||
Sbjct: 987393 tcacgatggcgatcatga 987410
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/158 (86%), Gaps = 4/158 (2%)
 Strand = Plus / Plus

                                                                          
Query: 131    aaaacttactgcagtaatcaagcttcagtcttt-tgctcttctgctgcttggtgatactg 189
              |||||||||||||| ||||||  ||||||  || ||||| || || ||||||||||||||
Sbjct: 987065 aaaacttactgcagcaatcaaatttcagttattgtgctcatcagcagcttggtgatactg 987124

                                                                          
Query: 190    gtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggttctgtgttg---gg 246
              |||||||||||| || |||||||| || || ||||||||||||||||||||||||   ||
Sbjct: 987125 gtagtcaccttcatcatatgcctcgccctcttcagggccttcaggttctgtgttgttagg 987184

                                                    
Query: 247    ttgtgcctgatagtactcatgctcatgtctctttgagc 284
              |||   ||||||||||||||||||||||| ||||||||
Sbjct: 987185 ttgcatctgatagtactcatgctcatgtcgctttgagc 987222



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Plus

                                                                          
Query: 550    atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
              ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 987431 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 987490

                                                                          
Query: 604    acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
              ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 987491 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 987550

                    
Query: 664    tctatg 669
               |||||
Sbjct: 987551 cctatg 987556



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                          
Query: 443    tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
              ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 987330 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 987389

                                
Query: 503    tcacggtgacgatcatga 520
              ||||| || |||||||||
Sbjct: 987390 tcacgatggcgatcatga 987407
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>ref|NM_194601.1| Oryza sativa (japonica cultivar-group) putative U1 small nuclear
            ribonucleoprotein (OSJNBa0092N12.2), mRNA
          Length = 1476

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 1454 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 1395

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 1394 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 1343



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 1134 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 1075

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1074 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 1015

                  
Query: 664  tctatg 669
             |||||
Sbjct: 1014 cctatg 1009



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 1235 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 1176

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 1175 tcacgatggcgatcatga 1158
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>gb|DQ377064.1| Oryza sativa (japonica cultivar-group) U1 small nuclear
            ribonucleoprotein 70K splice variant 2 mRNA, complete
            cds, alternatively spliced
          Length = 3284

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 2924 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 2865

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 2864 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 2813



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 2604 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 2545

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2544 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 2485

                  
Query: 664  tctatg 669
             |||||
Sbjct: 2484 cctatg 2479



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 2705 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 2646

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 2645 tcacgatggcgatcatga 2628
to top
>gb|DQ377063.1| Oryza sativa (japonica cultivar-group) U1 small nuclear
            ribonucleoprotein 70K splice variant 1 mRNA, complete
            cds, alternatively spliced
          Length = 3443

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 3083 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 3024

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 3023 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 2972



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 2763 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 2704

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2703 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 2644

                  
Query: 664  tctatg 669
             |||||
Sbjct: 2643 cctatg 2638



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 2864 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 2805

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 2804 tcacgatggcgatcatga 2787
to top
>gb|DQ377062.1| Oryza sativa (japonica cultivar-group) U1 small nuclear
            ribonucleoprotein 70K mRNA, complete cds, alternatively
            spliced
          Length = 1815

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 1455 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 1396

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 1395 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 1344



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 1135 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 1076

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1075 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 1016

                  
Query: 664  tctatg 669
             |||||
Sbjct: 1015 cctatg 1010



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 1236 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 1177

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 1176 tcacgatggcgatcatga 1159
to top
>dbj|AK100686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113P16, full
            insert sequence
          Length = 3436

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 3094 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 3035

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 3034 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 2983



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 2774 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 2715

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2714 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 2655

                  
Query: 664  tctatg 669
             |||||
Sbjct: 2654 cctatg 2649



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 2875 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 2816

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 2815 tcacgatggcgatcatga 2798
to top
>dbj|AK059504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A09, full
            insert sequence
          Length = 1796

 Score =  123 bits (62), Expect = 8e-25
 Identities = 100/112 (89%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||||| || |||||||| || || |||||||||||||||
Sbjct: 1454 gcttggtgatactggtagtcaccttcatcatatgcctcgccctcttcagggccttcaggt 1395

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 1394 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 1343



 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 1134 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 1075

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1074 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 1015

                  
Query: 664  tctatg 669
             |||||
Sbjct: 1014 cctatg 1009



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 1235 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 1176

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 1175 tcacgatggcgatcatga 1158
to top
>dbj|AK121007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046L24, full
            insert sequence
          Length = 1798

 Score =  117 bits (59), Expect = 5e-23
 Identities = 109/126 (86%), Gaps = 6/126 (4%)
 Strand = Plus / Minus

                                                                        
Query: 550  atccctaccacggtccctatccctatctctgtcccgacgatcacg------gtcacggtc 603
            ||||| |||||| ||||| ||||||||||| || |||||||||||      |||||||||
Sbjct: 1135 atcccgaccacgatccctgtccctatctctatcacgacgatcacgctcacggtcacggtc 1076

                                                                        
Query: 604  acgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatc 663
            ||| ||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1075 acgaccatgatctctctcccggtcccttcctcgttccctgtcccgagtcctgtcccgatc 1016

                  
Query: 664  tctatg 669
             |||||
Sbjct: 1015 cctatg 1010



 Score =  115 bits (58), Expect = 2e-22
 Identities = 99/112 (88%), Gaps = 3/112 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  gcttggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttcaggt 235
            |||||||||||||||||||||||| | || |||||||| || || |||||||||||||||
Sbjct: 1455 gcttggtgatactggtagtcacctccatcatatgcctcgccctcttcagggccttcaggt 1396

                                                                
Query: 236  tctgtgttg---ggttgtgcctgatagtactcatgctcatgtctctttgagc 284
            |||||||||   |||||   ||||||||||||||||||||||| ||||||||
Sbjct: 1395 tctgtgttgttaggttgcatctgatagtactcatgctcatgtcgctttgagc 1344



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                        
Query: 443  tgaccgcggtcacgttcgtaacttgcacgcccatcatctctctcacgatccctgcctctc 502
            ||||| ||||| ||||| | |||||||||| | | |||||||||||| ||||||||||||
Sbjct: 1236 tgaccacggtcccgttcatgacttgcacgctcgtaatctctctcacggtccctgcctctc 1177

                              
Query: 503  tcacggtgacgatcatga 520
            ||||| || |||||||||
Sbjct: 1176 tcacgatggcgatcatga 1159
to top
>gb|AY627768.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced
          Length = 3299

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 149/184 (80%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 486  cacgatccctgcctctctcacggtgacgatcatgagagagaccacgatccttctccctat 545
            |||| ||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 2800 cacggtccctgcctctctcacgatggcgatcatgagagcgaccacggtccctttctctat 2741

                                                                        
Query: 546  cgtgatccctaccacggtccctatccctatctctgtcccgacgatcacggtcacggtcac 605
            | |  |||| |||||| ||| | |||||      ||| ||||||||||| || |||||||
Sbjct: 2740 catagtcccgaccacgatccttgtccct------gtcacgacgatcacgctcccggtcac 2687

                                                                        
Query: 606  gcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatctc 665
            | || |||||| |||| |||||| ||||||  ||||| ||||||||||| || || ||||
Sbjct: 2686 ggccgtggtctctttcacggtcctttcctctctccctatcccgagtcctctcacggtctc 2627

                
Query: 666  tatg 669
            ||||
Sbjct: 2626 tatg 2623



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 180  ggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttc 231
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 3148 ggtgatactggtagtcgccttcctcatatgcctcaccttcctcagggccttc 3097
to top
>gb|AY627767.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced
          Length = 3463

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 149/184 (80%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 486  cacgatccctgcctctctcacggtgacgatcatgagagagaccacgatccttctccctat 545
            |||| ||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 2964 cacggtccctgcctctctcacgatggcgatcatgagagcgaccacggtccctttctctat 2905

                                                                        
Query: 546  cgtgatccctaccacggtccctatccctatctctgtcccgacgatcacggtcacggtcac 605
            | |  |||| |||||| ||| | |||||      ||| ||||||||||| || |||||||
Sbjct: 2904 catagtcccgaccacgatccttgtccct------gtcacgacgatcacgctcccggtcac 2851

                                                                        
Query: 606  gcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatctc 665
            | || |||||| |||| |||||| ||||||  ||||| ||||||||||| || || ||||
Sbjct: 2850 ggccgtggtctctttcacggtcctttcctctctccctatcccgagtcctctcacggtctc 2791

                
Query: 666  tatg 669
            ||||
Sbjct: 2790 tatg 2787



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 180  ggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttc 231
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 3312 ggtgatactggtagtcgccttcctcatatgcctcaccttcctcagggccttc 3261
to top
>gb|AY627766.1| Zea mays U1 snRNP mRNA, complete cds; alternatively spliced
          Length = 1647

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 149/184 (80%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 486  cacgatccctgcctctctcacggtgacgatcatgagagagaccacgatccttctccctat 545
            |||| ||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 1148 cacggtccctgcctctctcacgatggcgatcatgagagcgaccacggtccctttctctat 1089

                                                                        
Query: 546  cgtgatccctaccacggtccctatccctatctctgtcccgacgatcacggtcacggtcac 605
            | |  |||| |||||| ||| | |||||      ||| ||||||||||| || |||||||
Sbjct: 1088 catagtcccgaccacgatccttgtccct------gtcacgacgatcacgctcccggtcac 1035

                                                                        
Query: 606  gcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatctc 665
            | || |||||| |||| |||||| ||||||  ||||| ||||||||||| || || ||||
Sbjct: 1034 ggccgtggtctctttcacggtcctttcctctctccctatcccgagtcctctcacggtctc 975

                
Query: 666  tatg 669
            ||||
Sbjct: 974  tatg 971



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 180  ggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttc 231
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1496 ggtgatactggtagtcgccttcctcatatgcctcaccttcctcagggccttc 1445
to top
>gb|AY627765.1| Zea mays U1 snRNP gene, complete cds; alternatively spliced
          Length = 5550

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 149/184 (80%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                        
Query: 486  cacgatccctgcctctctcacggtgacgatcatgagagagaccacgatccttctccctat 545
            |||| ||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 4403 cacggtccctgcctctctcacgatggcgatcatgagagcgaccacggtccctttctctat 4344

                                                                        
Query: 546  cgtgatccctaccacggtccctatccctatctctgtcccgacgatcacggtcacggtcac 605
            | |  |||| |||||| ||| | |||||      ||| ||||||||||| || |||||||
Sbjct: 4343 catagtcccgaccacgatccttgtccct------gtcacgacgatcacgctcccggtcac 4290

                                                                        
Query: 606  gcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatctc 665
            | || |||||| |||| |||||| ||||||  ||||| ||||||||||| || || ||||
Sbjct: 4289 ggccgtggtctctttcacggtcctttcctctctccctatcccgagtcctctcacggtctc 4230

                
Query: 666  tatg 669
            ||||
Sbjct: 4229 tatg 4226



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 180  ggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttc 231
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 4751 ggtgatactggtagtcgccttcctcatatgcctcaccttcctcagggccttc 4700
to top
>gb|AY108570.1| Zea mays PCO063456 mRNA sequence
          Length = 1603

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 149/184 (80%), Gaps = 6/184 (3%)
 Strand = Plus / Minus

                                                                       
Query: 486 cacgatccctgcctctctcacggtgacgatcatgagagagaccacgatccttctccctat 545
           |||| ||||||||||||||||| || |||||||||||| ||||||| ||| | || ||||
Sbjct: 866 cacggtccctgcctctctcacgatggcgatcatgagagcgaccacggtccctttctctat 807

                                                                       
Query: 546 cgtgatccctaccacggtccctatccctatctctgtcccgacgatcacggtcacggtcac 605
           | |  |||| |||||| ||| | |||||      ||| ||||||||||| || |||||||
Sbjct: 806 catagtcccgaccacgatccttgtccct------gtcacgacgatcacgctcccggtcac 753

                                                                       
Query: 606 gcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcccgatctc 665
           | || |||||| |||| |||||| ||||||  ||||| ||||||||||| || || ||||
Sbjct: 752 ggccgtggtctctttcacggtcctttcctctctccctatcccgagtcctctcacggtctc 693

               
Query: 666 tatg 669
           ||||
Sbjct: 692 tatg 689



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                
Query: 180  ggtgatactggtagtcaccttcctcgtatgcctcaccttcctcagggccttc 231
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1214 ggtgatactggtagtcgccttcctcatatgcctcaccttcctcagggccttc 1163
to top
>gb|DQ019633.1| Triticum aestivum U1 snRNP-interacting 70 kDa protein (U1-70K) mRNA,
            complete cds
          Length = 1729

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 599  cggtcacgcccatggtctttttcccggtcccttcctcggtccctgtcccgagtcctgtcc 658
            |||||||||||| ||||| | ||| |||||||| |||| ||||| || ||||| || || 
Sbjct: 1024 cggtcacgcccacggtctctctcctggtccctttctcgatccctatcacgagttctctca 965

                       
Query: 659  cgatctctatg 669
            |||||||||||
Sbjct: 964  cgatctctatg 954



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 456  gttcgtaacttgcacgcccatcatctctctcacgatccctgcctct 501
            |||||| |||||||||| | | |||||| ||||| |||||||||||
Sbjct: 1149 gttcgtgacttgcacgctcgtaatctctgtcacggtccctgcctct 1104
to top
>gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete sequence
          Length = 102226

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 472   cccatcatctctctcacgatccc 494
             |||||||||||||||||||||||
Sbjct: 47648 cccatcatctctctcacgatccc 47626
to top
>gb|AC159716.6| Mus musculus 6 BAC RP23-80P15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 239739

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 562   gtccctatccctatctctgtccc 584
             |||||||||||||||||||||||
Sbjct: 49664 gtccctatccctatctctgtccc 49642
to top
>dbj|AP009046.1| Hyphantria cunea nucleopolyhedrovirus genomic DNA, complete genome
          Length = 132959

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 447    cgcggtcacgttcgtaacttgca 469
              |||||||||||||||||||||||
Sbjct: 116549 cgcggtcacgttcgtaacttgca 116571
to top
>gb|AC154859.2| Mus musculus BAC clone RP23-14B14 from chromosome 16, complete sequence
          Length = 200016

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 562    gtccctatccctatctctgtccc 584
              |||||||||||||||||||||||
Sbjct: 103842 gtccctatccctatctctgtccc 103864



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 562    gtccctatccctatctctgtccc 584
              |||||||||||||||||||||||
Sbjct: 103824 gtccctatccctatctctgtccc 103846



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 562    gtccctatccctatctctgtccc 584
              |||||||||||||||||||||||
Sbjct: 103806 gtccctatccctatctctgtccc 103828



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 562    gtccctatccctatctctgtccc 584
              |||||||||||||||||||||||
Sbjct: 103788 gtccctatccctatctctgtccc 103810



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 562    gtccctatccctatctctgtccc 584
              |||||||||||||||||||||||
Sbjct: 103770 gtccctatccctatctctgtccc 103792
to top
>ref|XM_632633.1| Dictyostelium discoideum hypothetical protein (DDB0186947), partial
           mRNA
          Length = 2016

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 556 accacggtccctatccctatctctgtccc 584
           |||||| ||||||||||||||||| ||||
Sbjct: 189 accacgatccctatccctatctctatccc 161
to top
>ref|XM_322654.1| Neurospora crassa OR74A hypothetical protein (NCU03397.1) partial
           mRNA
          Length = 786

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 402 acgatcacggtcacggtcacg 382
to top
>ref|XM_951751.1| Neurospora crassa OR74A hypothetical protein (NCU03397.1) partial
           mRNA
          Length = 786

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 402 acgatcacggtcacggtcacg 382
to top
>gb|AC146428.3| Pan troglodytes BAC clone RP43-22M18 from 7, complete sequence
          Length = 194995

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   attgtattcagcatccctatc 435
             |||||||||||||||||||||
Sbjct: 23819 attgtattcagcatccctatc 23839
to top
>ref|XM_385689.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05513.1)
           partial mRNA
          Length = 1071

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 996 acgatcacggtcacggtcacg 976
to top
>ref|XM_382910.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02734.1)
            partial mRNA
          Length = 2118

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 586  acgatcacggtcacggtcacg 606
            |||||||||||||||||||||
Sbjct: 1929 acgatcacggtcacggtcacg 1909
to top
>gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete sequence
          Length = 70416

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   attgtattcagcatccctatc 435
             |||||||||||||||||||||
Sbjct: 60774 attgtattcagcatccctatc 60754
to top
>gb|AF038619.2| Caenorhabditis elegans cosmid F56A11, complete sequence
          Length = 35376

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 586   acgatcacggtcacggtcacg 606
             |||||||||||||||||||||
Sbjct: 32462 acgatcacggtcacggtcacg 32482
to top
>gb|AF067607.3| Caenorhabditis elegans cosmid C18H7, complete sequence
          Length = 40504

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 80  acgatcacggtcacggtcacg 100
to top
>emb|AL031589.10|HS11O7 Human DNA sequence from clone RP6-11O7 on chromosome 22q13.1-13.2,
             complete sequence
          Length = 115932

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 361   agagccataatgcttcccata 381
             |||||||||||||||||||||
Sbjct: 81761 agagccataatgcttcccata 81741
to top
>emb|BX034813.1|CNS08Z0X Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA50DF02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 318

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 139 acgatcacggtcacggtcacg 119
to top
>emb|BX027358.1|CNS08T9U Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA40DH10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 274

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 256 acgatcacggtcacggtcacg 236
to top
>gb|AY282786.1| Desulfovibrio gigas ech operon, complete sequence
          Length = 5454

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 463  acttgcacgcccatcatctct 483
            |||||||||||||||||||||
Sbjct: 4065 acttgcacgcccatcatctct 4045
to top
>emb|BX009328.1|CNS08FD0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA15AF06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 887

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 791 acgatcacggtcacggtcacg 811
to top
>emb|BX009327.1|CNS08FCZ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA15AF06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 464

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 586 acgatcacggtcacggtcacg 606
           |||||||||||||||||||||
Sbjct: 374 acgatcacggtcacggtcacg 354
to top
>emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II BAC clone B19C19
          Length = 61082

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 586   acgatcacggtcacggtcacg 606
             |||||||||||||||||||||
Sbjct: 16323 acgatcacggtcacggtcacg 16303
to top
>emb|CR627316.1| Homo sapiens genomic DNA; cDNA DKFZp686O11128 (from clone
            DKFZp686O11128)
          Length = 4350

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 361  agagccataatgcttcccata 381
            |||||||||||||||||||||
Sbjct: 2627 agagccataatgcttcccata 2607
to top
>ref|NM_067549.2| Caenorhabditis elegans F56A11.6 (F56A11.6) mRNA, complete cds
          Length = 1421

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 586  acgatcacggtcacggtcacg 606
            |||||||||||||||||||||
Sbjct: 1218 acgatcacggtcacggtcacg 1198
to top
>ref|NM_125120.2| Arabidopsis thaliana unknown protein AT5G57370 mRNA, complete cds
          Length = 1009

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 178 cgatcacggtcacggtcacg 159
to top
>ref|XM_631879.1| Dictyostelium discoideum hypothetical protein (DDB0187704), partial
           mRNA
          Length = 4344

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 549 gatccctaccacggtccctatccctatc 576
           |||||||| |||| ||||||||||||||
Sbjct: 979 gatccctatcacgatccctatccctatc 952
to top
>ref|XM_482855.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1787

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 341 tcatggccatgcccatgccc 322
to top
>ref|XM_507589.1| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.41 mRNA
          Length = 1972

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 344 tcatggccatgcccatgccc 325
to top
>ref|XM_507265.2| PREDICTED Oryza sativa (japonica cultivar-group), P0104B02.41 mRNA
          Length = 2555

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 345 tcatggccatgcccatgccc 326
to top
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence
          Length = 289751

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  agcttcagtcttttgctcttctgc 174
            |||| |||||||||||||||||||
Sbjct: 5837 agctccagtcttttgctcttctgc 5860
to top
>ref|XM_841434.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4950)
           partial mRNA
          Length = 252

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 532 atccttctccctatcgtgat 551
           ||||||||||||||||||||
Sbjct: 53  atccttctccctatcgtgat 72
to top
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome
          Length = 152261

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ctttcagtttcatggccatg 303
             ||||||||||||||||||||
Sbjct: 69785 ctttcagtttcatggccatg 69804
to top
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete
             sequence
          Length = 165103

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   tcctgtcatgctttggctca 412
             ||||||||||||||||||||
Sbjct: 41674 tcctgtcatgctttggctca 41655
to top
>emb|CR698862.2|CNS0G26Y Tetraodon nigroviridis full-length cDNA
          Length = 1982

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 586 acgatcacggtcacggtcac 605
           ||||||||||||||||||||
Sbjct: 786 acgatcacggtcacggtcac 805
to top
>ref|XM_660953.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80519)
           partial mRNA
          Length = 3219

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 589 atcacggtcacggtcacgcccatg 612
           |||||||||||||||||| |||||
Sbjct: 614 atcacggtcacggtcacggccatg 637
to top
>ref|XM_503754.1| Yarrowia lipolytica CLIB122, YALI0E09889g predicted mRNA
          Length = 1806

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 563 tccctatccctatctctgtc 582
           ||||||||||||||||||||
Sbjct: 428 tccctatccctatctctgtc 409
to top
>gb|AY113928.1| Arabidopsis thaliana unknown protein (At5g57370) mRNA, complete cds
          Length = 691

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 101 cgatcacggtcacggtcacg 82
to top
>gb|AF370233.1| Arabidopsis thaliana unknown protein (At5g57370) mRNA, complete cds
          Length = 1020

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 175 cgatcacggtcacggtcacg 156
to top
>gb|AF486184.1| Bovine papillomavirus type 3, complete genome
          Length = 7276

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 587  cgatcacggtcacggtcacg 606
            ||||||||||||||||||||
Sbjct: 3273 cgatcacggtcacggtcacg 3292
to top
>emb|AJ620207.1| Bovine papillomavirus type 3 complete genome
          Length = 7275

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 587  cgatcacggtcacggtcacg 606
            ||||||||||||||||||||
Sbjct: 3564 cgatcacggtcacggtcacg 3583
to top
>dbj|AB252867.1| Human herpesvirus 1 UL34 gene for virion protein, complete cds
          Length = 828

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 ctttcagtttcatggccatg 303
           ||||||||||||||||||||
Sbjct: 153 ctttcagtttcatggccatg 172
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 501     tctcacggtgacgatcatga 520
               ||||||||||||||||||||
Sbjct: 3158914 tctcacggtgacgatcatga 3158895
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 585    gacgatcacggtcacggtca 604
              ||||||||||||||||||||
Sbjct: 479044 gacgatcacggtcacggtca 479063
to top
>ref|NM_057497.3| Drosophila melanogaster grainy head CG5058-RD, transcript variant D
            (grh), mRNA
          Length = 5656

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 982  cacggtcacggtcacgccca 1001
to top
>ref|NM_057496.3| Drosophila melanogaster grainy head CG5058-RC, transcript variant C
            (grh), mRNA
          Length = 5563

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 982  cacggtcacggtcacgccca 1001
to top
>ref|NM_057495.3| Drosophila melanogaster grainy head CG5058-RB, transcript variant B
            (grh), mRNA
          Length = 4753

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 982  cacggtcacggtcacgccca 1001
to top
>ref|NM_057494.3| Drosophila melanogaster grainy head CG5058-RA, transcript variant A
            (grh), mRNA
          Length = 4846

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 982  cacggtcacggtcacgccca 1001
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 584     cgacgatcacggtcacggtc 603
               ||||||||||||||||||||
Sbjct: 2965481 cgacgatcacggtcacggtc 2965500
to top
>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    gtccctatccctatctctgt 581
              ||||||||||||||||||||
Sbjct: 158999 gtccctatccctatctctgt 159018
to top
>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone
             BACR20E20, complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   cacggtcacggtcacgccca 610
             ||||||||||||||||||||
Sbjct: 78970 cacggtcacggtcacgccca 78989
to top
>ref|XM_624370.1| PREDICTED: Apis mellifera similar to ENSANGP00000018276
           (LOC551987), mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 890 cgatcacggtcacggtcacg 871
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      tcatggccatgcccatgccc 312
                ||||||||||||||||||||
Sbjct: 22987384 tcatggccatgcccatgccc 22987403
to top
>emb|BX833689.1|CNS0A0AO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL71ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 958

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 129 cgatcacggtcacggtcacg 110
to top
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence
          Length = 175222

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ttgtgttgctcatgctggtt 360
             ||||||||||||||||||||
Sbjct: 71056 ttgtgttgctcatgctggtt 71075
to top
>gb|AE009499.1| Brucella melitensis 16M chromosome I, section 56 of 195 of the
            complete sequence
          Length = 10455

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  ttcagtttcatggccatgcc 305
            ||||||||||||||||||||
Sbjct: 3734 ttcagtttcatggccatgcc 3715
to top
>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete
             sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tcctgtcatgctttggctca 412
             ||||||||||||||||||||
Sbjct: 13371 tcctgtcatgctttggctca 13390
to top
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence
          Length = 155702

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ttgtgttgctcatgctggtt 360
            ||||||||||||||||||||
Sbjct: 9527 ttgtgttgctcatgctggtt 9546
to top
>gb|AY087116.1| Arabidopsis thaliana clone 31894 mRNA, complete sequence
          Length = 1006

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 cgatcacggtcacggtcacg 606
           ||||||||||||||||||||
Sbjct: 178 cgatcacggtcacggtcacg 159
to top
>gb|AC112229.4| Homo sapiens BAC clone RP13-1039J1 from 2, complete sequence
          Length = 154279

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   ttgtgttgctcatgctggtt 360
             ||||||||||||||||||||
Sbjct: 17560 ttgtgttgctcatgctggtt 17541
to top
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0104B02
          Length = 169588

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    tcatggccatgcccatgccc 312
              ||||||||||||||||||||
Sbjct: 161222 tcatggccatgcccatgccc 161241
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>dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSF19
          Length = 34508

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   cgatcacggtcacggtcacg 606
             ||||||||||||||||||||
Sbjct: 10360 cgatcacggtcacggtcacg 10341
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   tcatggccatgcccatgccc 312
             ||||||||||||||||||||
Sbjct: 47112 tcatggccatgcccatgccc 47131
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>ref|XM_557151.1| Anopheles gambiae str. PEST ENSANGP00000028277 (ENSANGG00000010999),
            partial mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  tcagtcttttgctcttctgc 174
            ||||||||||||||||||||
Sbjct: 1565 tcagtcttttgctcttctgc 1546
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>ref|XM_316511.2| Anopheles gambiae str. PEST ENSANGP00000013488 (ENSANGG00000010999),
            partial mRNA
          Length = 2526

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  tcagtcttttgctcttctgc 174
            ||||||||||||||||||||
Sbjct: 2219 tcagtcttttgctcttctgc 2200
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>dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B01, full
           insert sequence
          Length = 1786

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 341 tcatggccatgcccatgccc 322
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>dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089E10, full
           insert sequence
          Length = 1972

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 344 tcatggccatgcccatgccc 325
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>dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054A11, full
           insert sequence
          Length = 2555

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcatggccatgcccatgccc 312
           ||||||||||||||||||||
Sbjct: 345 tcatggccatgcccatgccc 326
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>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18,
             complete sequence
          Length = 94961

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   ttgtgttgctcatgctggtt 360
             ||||||||||||||||||||
Sbjct: 14634 ttgtgttgctcatgctggtt 14615
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>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the
            complete sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 6227 cacggtcacggtcacgccca 6246
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>gb|AC004328.1|AC004328 Drosophila melanogaster, chromosome 2R, region 54E8-54F2, P1 clone
             DS02155, complete sequence
          Length = 55452

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   cacggtcacggtcacgccca 610
             ||||||||||||||||||||
Sbjct: 38559 cacggtcacggtcacgccca 38578
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 563     tccctatccctatctctgtc 582
               ||||||||||||||||||||
Sbjct: 1215470 tccctatccctatctctgtc 1215451
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>emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chromosome 12, complete
              sequence
          Length = 211056

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    agcttcagtcttttgctcttctgc 174
              |||| |||||||||||||||||||
Sbjct: 101564 agctccagtcttttgctcttctgc 101541
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>emb|X15657.1|DMELF1 Drosophila mRNA for DNA-binding protein Elf1 (Elf1 = element
            I-binding activity)
          Length = 4839

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 987  cacggtcacggtcacgccca 1006
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>emb|AL035312.1|DMC191D12 Drosophila melanogaster cosmid clone 191D12
          Length = 10500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cacggtcacggtcacgccca 610
            ||||||||||||||||||||
Sbjct: 2187 cacggtcacggtcacgccca 2206
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>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   gtccctatccctatctctgt 581
             ||||||||||||||||||||
Sbjct: 15970 gtccctatccctatctctgt 15989
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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   gtccctatccctatctctgt 581
             ||||||||||||||||||||
Sbjct: 94612 gtccctatccctatctctgt 94631


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,675,148
Number of Sequences: 3902068
Number of extensions: 5675148
Number of successful extensions: 135846
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135368
Number of HSP's gapped (non-prelim): 463
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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