ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18p09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059810.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-A07, full insert sequence Length = 1029 Score = 484 bits (244), Expect = e-133 Identities = 340/372 (91%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 740 ggccatgttgcttgagatgacatgattatgcccacaatcactccaaacagacccaaggcg 681 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 680 ctgccgaagatctcaatcaccaagatctttacaaagagtgatgaattctgagcatcagac 621 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 620 aatgcacagctgcttccaattattcccacacaaaccccgcaaacaagattagcaaagcca 561 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||||||||| || |||||||||||||||||||| || | ||||||||||| ||||| | Sbjct: 560 acaataagaccagacgcaaagattgcataaccagcccggagagactctggatgatgcact 501 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 | | ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 500 agagcagttggtacactttcaagcttagtttggaggatgattgccacgataacaccataa 441 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcc 594 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 440 attgcaacagcctcacagaagatgacactgatgaggttcttggaggtgatcctgggggcc 381 Query: 595 ttgatggcggcc 606 |||||||||||| Sbjct: 380 ttgatggcggcc 369 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 49 agtctttacagtaggcacagtatctctacgatcagatacatcaagcaccaaaatacgtga 108 ||||||||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||| Sbjct: 919 agtctttacagtaggaacagtatctctaccgtcagatgcatcaagcatcaatatacgtga 860 Query: 109 tttaccaaaaatg 121 ||| ||||||||| Sbjct: 859 tttgccaaaaatg 847 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1 tctgcaaaagcaatagcacctacaagat 28 |||||||||||||||||||||||||||| Sbjct: 962 tctgcaaaagcaatagcacctacaagat 935
>ref|NM_192733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 476 bits (240), Expect = e-131 Identities = 339/372 (91%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 518 ggccatgttgcttgagatgacatgattatgcccacaatcactccaaacagacccaaggcg 459 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 458 ctgccgaagatctcaatcaccaagatctttacaaagagtgatgaattctgagcatcagac 399 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 398 aatgcacagctgcttccaattattcccacacaaaccccgcaaacaagattagcaaagcca 339 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||||||||| || |||||||||||||| ||||| || | ||||||||||| ||||| | Sbjct: 338 acaataagaccagacgcaaagattgcatagccagcccggagagactctggatgatgcact 279 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 | | ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 278 agagcagttggtacactttcaagcttagtttggaggatgattgccacgataacaccataa 219 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcc 594 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 218 attgcaacagcctcacagaagatgacactgatgaggttcttggaggtgatcctgggggcc 159 Query: 595 ttgatggcggcc 606 |||||||||||| Sbjct: 158 ttgatggcggcc 147
>dbj|AK104951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C12, full insert sequence Length = 1003 Score = 476 bits (240), Expect = e-131 Identities = 339/372 (91%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 740 ggccatgttgcttgagatgacatgattatgcccacaatcactccaaacagacccaaggcg 681 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 680 ctgccgaagatctcaatcaccaagatctttacaaagagtgatgaattctgagcatcagac 621 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 620 aatgcacagctgcttccaattattcccacacaaaccccgcaaacaagattagcaaagcca 561 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||||||||| || |||||||||||||| ||||| || | ||||||||||| ||||| | Sbjct: 560 acaataagaccagacgcaaagattgcatagccagcccggagagactctggatgatgcact 501 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 | | ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 500 agagcagttggtacactttcaagcttagtttggaggatgattgccacgataacaccataa 441 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcc 594 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 440 attgcaacagcctcacagaagatgacactgatgaggttcttggaggtgatcctgggggcc 381 Query: 595 ttgatggcggcc 606 |||||||||||| Sbjct: 380 ttgatggcggcc 369 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 49 agtctttacagtaggcacagtatctctacgatcagatacatcaagcaccaaaatacgtga 108 ||||||||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||| Sbjct: 919 agtctttacagtaggaacagtatctctaccgtcagatgcatcaagcatcaatatacgtga 860 Query: 109 tttaccaaaaatg 121 ||| ||||||||| Sbjct: 859 tttgccaaaaatg 847 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1 tctgcaaaagcaatagcacctacaagat 28 |||||||||||||||||||||||||||| Sbjct: 962 tctgcaaaagcaatagcacctacaagat 935
>gb|AY103992.1| Zea mays PCO096443 mRNA sequence Length = 914 Score = 422 bits (213), Expect = e-115 Identities = 330/369 (89%) Strand = Plus / Minus Query: 234 tggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagc 293 ||||||||| || |||| |||||| || || ||||| || ||||| || || |||| ||| Sbjct: 593 tggccatgtcgcctgagatgacataatgatgcccacaatgactccgaacagtcccagagc 534 Query: 294 actgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcaga 353 ||||| |||||||||||||||| |||||||||||||||| ||| ||||| |||||||| Sbjct: 533 gctgccgaagatctcaatcaccaaaatctttacaaagagtgatgagttctgagcatcaga 474 Query: 354 cagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagcc 413 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 473 cagtgcacagctgcttccgattatccccacacataccccgcaaacaagattagcgaagcc 414 Query: 414 gacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcat 473 || |||||||| || |||||||| ||||| |||||||| | |||||| ||||| | ||| Sbjct: 413 aacgataagaccagatgcaaagatcgcatagccagctcgaagagactccggatcgtacat 354 Query: 474 tcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccata 533 | |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 353 ttgggatgttggcacactttcaagctttgtctggaggatgattgccacaattacaccata 294 Query: 534 aattgcaacggcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgc 593 ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 293 aattgcaacagcctcacagaagatgacactgatgaggttcttagatgtgatcctgggcgc 234 Query: 594 cttgatggc 602 ||||||||| Sbjct: 233 cttgatggc 225 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 5 caaaagcaatagcacctacaagat 28 |||||||||||||||||||||||| Sbjct: 815 caaaagcaatagcacctacaagat 792
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 212 bits (107), Expect = 1e-51 Identities = 158/175 (90%) Strand = Plus / Minus Query: 390 cccgcaaacaagattagcaaagccgacaataagacctgaggcaaagattgcataaccagc 449 |||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 24125211 cccgcaaacaagattagcaaagccaacaataagaccagacgcaaagattgcatagccagc 24125152 Query: 450 tcgcatagactctggatcatgcattcgggatgttggcacactttcaagctttgtttggag 509 || | ||||||||||| ||||| | | | ||||| |||||||||||||| |||||||| Sbjct: 24125151 ccggagagactctggatgatgcactagagcagttggtacactttcaagcttagtttggag 24125092 Query: 510 gatgattgccacgattacaccataaattgcaacggcctcacagaagatgacactg 564 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 24125091 gatgattgccacgataacaccataaattgcaacagcctcacagaagatgacactg 24125037 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 24125443 ggccatgttgcttgagatgacatgattatgcccacaatcactccaaacagacccaaggcg 24125384 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 24125383 ctgccgaagatctcaatcaccaagatctttacaaagagtgatgaattctgagcatcagac 24125324 Query: 355 agtgcacagctgcttccgattattcccac 383 | ||||||||||||||| ||||||||||| Sbjct: 24125323 aatgcacagctgcttccaattattcccac 24125295 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 49 agtctttacagtaggcacagtatctctacgatcagatacatcaagcaccaaaatacgtga 108 ||||||||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||| Sbjct: 24125622 agtctttacagtaggaacagtatctctaccgtcagatgcatcaagcatcaatatacgtga 24125563 Query: 109 tttaccaaaaatg 121 ||| ||||||||| Sbjct: 24125562 tttgccaaaaatg 24125550 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 562 ctgatgaggttcttggaggtgatcctgggcgccttgatggcggcc 606 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 24123261 ctgatgaggttcttggaggtgatcctgggggccttgatggcggcc 24123217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1 tctgcaaaagcaatagcacctacaagat 28 |||||||||||||||||||||||||||| Sbjct: 24125665 tctgcaaaagcaatagcacctacaagat 24125638
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 212 bits (107), Expect = 1e-51 Identities = 158/175 (90%) Strand = Plus / Minus Query: 390 cccgcaaacaagattagcaaagccgacaataagacctgaggcaaagattgcataaccagc 449 |||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 101033 cccgcaaacaagattagcaaagccaacaataagaccagacgcaaagattgcatagccagc 100974 Query: 450 tcgcatagactctggatcatgcattcgggatgttggcacactttcaagctttgtttggag 509 || | ||||||||||| ||||| | | | ||||| |||||||||||||| |||||||| Sbjct: 100973 ccggagagactctggatgatgcactagagcagttggtacactttcaagcttagtttggag 100914 Query: 510 gatgattgccacgattacaccataaattgcaacggcctcacagaagatgacactg 564 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 100913 gatgattgccacgataacaccataaattgcaacagcctcacagaagatgacactg 100859 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||| |||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 101265 ggccatgttgcttgagatgacatgattatgcccacaatcactccaaacagacccaaggcg 101206 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| Sbjct: 101205 ctgccgaagatctcaatcaccaagatctttacaaagagtgatgaattctgagcatcagac 101146 Query: 355 agtgcacagctgcttccgattattcccac 383 | ||||||||||||||| ||||||||||| Sbjct: 101145 aatgcacagctgcttccaattattcccac 101117 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 49 agtctttacagtaggcacagtatctctacgatcagatacatcaagcaccaaaatacgtga 108 ||||||||||||||| ||||||||||||| |||||| ||||||||| ||| |||||||| Sbjct: 101444 agtctttacagtaggaacagtatctctaccgtcagatgcatcaagcatcaatatacgtga 101385 Query: 109 tttaccaaaaatg 121 ||| ||||||||| Sbjct: 101384 tttgccaaaaatg 101372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 562 ctgatgaggttcttggaggtgatcctgggcgccttgatggcggcc 606 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 99083 ctgatgaggttcttggaggtgatcctgggggccttgatggcggcc 99039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 1 tctgcaaaagcaatagcacctacaagat 28 |||||||||||||||||||||||||||| Sbjct: 101487 tctgcaaaagcaatagcacctacaagat 101460
>gb|AY185518.1| Gossypium barbadense clone 1__2 putative vacuolar ATP synthase gene, partial cds Length = 367 Score = 161 bits (81), Expect = 3e-36 Identities = 183/217 (84%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||||||||||||||||||| |||||||| || || || || | ||| Sbjct: 304 ggccatgttgcttgagctgacatgattatacctacgatcaccccgaacagtccaagtgca 245 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 |||||||| ||||||||||| || ||||| ||||| |||| || || || ||||||||| Sbjct: 244 ctgccaaaaatctcaatcacaagaatcttcacaaacagtgaggagttttgtgcatcagac 185 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 || |||||||| ||||| |||||||| || || | ||||||||||| || ||||| || Sbjct: 184 agcgcacagctacttccaattattccaacacacaatccgcaaacaaggtttgcaaaccca 125 Query: 415 acaataagacctgaggcaaagattgcataaccagctc 451 ||||||| ||||| |||||||||||||| ||||||| Sbjct: 124 acaataattcctgaagcaaagattgcatatccagctc 88
>gb|AY185519.1| Gossypium barbadense clone 2__2 putative vacuolar ATP synthase gene, partial cds Length = 367 Score = 157 bits (79), Expect = 5e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||||||||||||||||||||||||||| || ||||| || || || || | ||| Sbjct: 304 ggccatgttgcttgagctgacatgattatacctacaatcaccccgaacagtccaagtgca 245 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 |||||||| ||||||||||| || ||||| ||||| |||| || || || ||||||||| Sbjct: 244 ctgccaaaaatctcaatcacaagaatcttcacaaacagtgaggagttttgtgcatcagac 185 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 || |||||||| ||||| |||||||| || || | ||||||||||| || ||||| || Sbjct: 184 agcgcacagctacttccaattattccaacacacaatccgcaaacaaggtttgcaaatcca 125 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcat 469 ||||||| ||||| |||||||||||||| ||||||| | ||||||||| |||| Sbjct: 124 acaataattcctgaagcaaagattgcatatccagctctaagagactctggttcat 70
>ref|NM_128119.1| Arabidopsis thaliana ATPase AT2G25610 mRNA, complete cds Length = 868 Score = 155 bits (78), Expect = 2e-34 Identities = 282/350 (80%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 564 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 505 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 504 ctcccaaagatctcaatcacaagaatcttaacaaagagcgtcgagttctgagcatcagac 445 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||| || |||||||| || ||||| || |||| |||||| ||||| || || || || Sbjct: 444 aatgcgcaactgcttccaatgattcctacacataacccgcatacaaggtttgcgaatcca 385 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||| | || || |||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 384 acaatgattccagaagcaaagattgcatatccagctcttagagactcagcatcatacatc 325 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 |||| ||| ||||| || | ||| ||||| | ||||||||||| || ||||| || Sbjct: 324 tttgatgatggtacactctccaacttcgtttgtaatatgattgccacaataacaccgtat 265 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgat 584 || || ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 264 atagccacggcttcacagaagattacactgatgagattcttggaagtgat 215
>gb|AF436827.1|AF436827 Arabidopsis thaliana At2g25620/F3N11.7 mRNA, complete cds Length = 2722 Score = 155 bits (78), Expect = 2e-34 Identities = 282/350 (80%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 2636 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 2577 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 2576 ctcccaaagatctcaatcacaagaatcttaacaaagagcgtcgagttctgagcatcagac 2517 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||| || |||||||| || ||||| || |||| |||||| ||||| || || || || Sbjct: 2516 aatgcgcaactgcttccaatgattcctacacataacccgcatacaaggtttgcgaatcca 2457 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||| | || || |||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 2456 acaatgattccagaagcaaagattgcatatccagctcttagagactcagcatcatacatc 2397 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 |||| ||| ||||| || | ||| ||||| | ||||||||||| || ||||| || Sbjct: 2396 tttgatgatggtacactctccaacttcgtttgtaatatgattgccacaataacaccgtat 2337 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgat 584 || || ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2336 atagccacggcttcacagaagattacactgatgagattcttggaagtgat 2287
>gb|AY084540.1| Arabidopsis thaliana clone 11111 mRNA, complete sequence Length = 871 Score = 155 bits (78), Expect = 2e-34 Identities = 282/350 (80%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 565 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 506 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 505 ctcccaaagatctcaatcacaagaatcttaacaaagagcgtcgagttctgagcatcagac 446 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||| || |||||||| || ||||| || |||| |||||| ||||| || || || || Sbjct: 445 aatgcgcaactgcttccaatgattcctacacataacccgcatacaaggtttgcgaatcca 386 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||| | || || |||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 385 acaatgattccagaagcaaagattgcatatccagctcttagagactcagcatcatacatc 326 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 |||| ||| ||||| || | ||| ||||| | ||||||||||| || ||||| || Sbjct: 325 tttgatgatggtacactctccaacttcgtttgtaatatgattgccacaataacaccgtat 266 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgat 584 || || ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 265 atagccacggcttcacagaagattacactgatgagattcttggaagtgat 216
>gb|BT002487.1| Arabidopsis thaliana Unnknown protein (At2g25610:At2g25620) mRNA, complete cds Length = 2721 Score = 155 bits (78), Expect = 2e-34 Identities = 282/350 (80%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 2636 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 2577 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 2576 ctcccaaagatctcaatcacaagaatcttaacaaagagcgtcgagttctgagcatcagac 2517 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||| || |||||||| || ||||| || |||| |||||| ||||| || || || || Sbjct: 2516 aatgcgcaactgcttccaatgattcctacacataacccgcatacaaggtttgcgaatcca 2457 Query: 415 acaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcatt 474 ||||| | || || |||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 2456 acaatgattccagaagcaaagattgcatatccagctcttagagactcagcatcatacatc 2397 Query: 475 cgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccataa 534 |||| ||| ||||| || | ||| ||||| | ||||||||||| || ||||| || Sbjct: 2396 tttgatgatggtacactctccaacttcgtttgtaatatgattgccacaataacaccgtat 2337 Query: 535 attgcaacggcctcacagaagatgacactgatgaggttcttggaggtgat 584 || || ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2336 atagccacggcttcacagaagattacactgatgagattcttggaagtgat 2287
>emb|BX819373.1|CNS0AADF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB72ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 747 Score = 133 bits (67), Expect = 7e-28 Identities = 281/351 (80%), Gaps = 1/351 (0%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 545 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 486 Query: 295 ctgccaaagatctcaa-tcaccaggatctttacaaagagtgttgaattctgggcatcaga 353 || ||||||||||||| |||| || ||||| |||||||| || || ||||| |||||||| Sbjct: 485 ctcccaaagatctcaattcacaagaatcttaacaaagagcgtcgagttctgagcatcaga 426 Query: 354 cagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagcc 413 || ||| || |||||||| || ||||| || |||| |||||| ||||| || || || || Sbjct: 425 caatgcgcaactgcttccaatgattcctacacataacccgcatacaaggtttgcgaatcc 366 Query: 414 gacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatcatgcat 473 ||||| | || || |||||||||||||| ||||||| | |||||| | ||||| ||| Sbjct: 365 aacaatgattccagaagcaaagattgcatatccagctcttagagactcagcatcatacat 306 Query: 474 tcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattacaccata 533 |||| ||| ||||| || | ||| ||||| ||||||||||| || ||||| || Sbjct: 305 ctttgatgatggtacactctccaacttcgtttgttatatgattgccacaataacaccgta 246 Query: 534 aattgcaacggcctcacagaagatgacactgatgaggttcttggaggtgat 584 || || ||||| ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 245 tatagccacggcttcacagaagattacactgatgagattcttggaagtgat 195
>gb|BT013030.1| Lycopersicon esculentum clone 114278R, mRNA sequence Length = 1047 Score = 131 bits (66), Expect = 3e-27 Identities = 180/218 (82%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 ||||||||||||||||||||||||||||| ||||| ||||||||||| | |||| ||| Sbjct: 653 ggccatgttgcttgagctgacatgattattcccacaatcactccaaacaatcccagtgca 594 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 |||||||| ||||||||||| || ||||| || || || || ||||| || ||||| ||| Sbjct: 593 ctgccaaaaatctcaatcacaagaatcttgacgaaaagggtggaattttgtgcatctgac 534 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||| || ||||| || || || || ||||| | |||||||||||| || |||||||| Sbjct: 533 aatgcgcaactgctaccaataatccctacgcagagcccgcaaacaaggttggcaaagccc 474 Query: 415 acaataagacctgaggcaaagattgcataaccagctcg 452 ||||| | || |||||||| |||||||| || ||||| Sbjct: 473 acaattattccagaggcaaatattgcatatcctgctcg 436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 514 attgccacgattacaccataaattgcaacggcctcacagaagatgacactgatgaggttc 573 |||||||| || |||||||| || |||||||| |||||||| || ||||| || || ||| Sbjct: 374 attgccacaataacaccatagatagcaacggcttcacagaaaatcacactaataagattc 315 Query: 574 ttggaggtgat 584 ||||||||||| Sbjct: 314 ttggaggtgat 304
>gb|AY226999.1| Citrus limon vacuolar membrane ATPase subunit c'' (VMA16) mRNA, complete cds Length = 891 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 ||||||| ||||||||||||||| ||||| || || ||||||||||| | || | |||| Sbjct: 678 ggccatgatgcttgagctgacataattattccaacaatcactccaaacaacccaagagca 619 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||||| ||||| ||||| | | || || |||||||||||| Sbjct: 618 ctaccaaagatctcaatcaccaaaatcttcacaaacaaggacgagttttgggcatcagac 559 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 | ||||||||||||||| |||||||| || || | ||| ||||| || ||||||||||| Sbjct: 558 aatgcacagctgcttccaattattcctacacacaacccacaaactaggttagcaaagccc 499 Query: 415 acaataagacctgaggcaaagattgcataaccagctc 451 || || | || ||||||||||| ||||| ||||||| Sbjct: 498 acgatgatcccagaggcaaagatggcatatccagctc 462 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 487 acactttcaagctttgtttggaggatgattgccacgattacaccataaattgcaacggcc 546 |||||||| | ||||||||| | || ||||| || || || ||||| || ||||| || Sbjct: 426 acactttctaactttgtttgtaaaataattgcaacaatgaccccatatatagcaacagct 367 Query: 547 tcacagaagatgacactgatgaggttcttggaggtgatcctgggcgccttgatggcggc 605 ||||| || || ||||||||||| |||||||||||||| | || |||||||| ||||| Sbjct: 366 tcacaaaaaattacactgatgagattcttggaggtgatacgaggagccttgattgcggc 308
>ref|NM_119405.2| Arabidopsis thaliana ATPase AT4G32530 mRNA, complete cds Length = 938 Score = 119 bits (60), Expect = 1e-23 Identities = 276/348 (79%) Strand = Plus / Minus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 650 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 591 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 590 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 531 Query: 348 atcagacagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagc 407 ||| |||| |||||| |||||||| || ||||| || |||| |||||| ||||| || || Sbjct: 530 atcggacaatgcacaactgcttccaatgattcctacacataacccgcatacaaggttggc 471 Query: 408 aaagccgacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatc 467 || || || |||| || || |||||||||||||| ||||||| | |||||| | ||| Sbjct: 470 gaatccaactataattccagatgcaaagattgcatatccagctctaagagactcagcatc 411 Query: 468 atgcattcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattac 527 || ||| || | ||| ||||| || | ||||||||| || |||||||| || || || Sbjct: 410 atacatctttgaagatgggacactctccaactttgtttgcagtatgattgcaacaataac 351 Query: 528 accataaattgcaacggcctcacagaagatgacactgatgaggttctt 575 ||||| || ||||| || || || ||||||||||||||||| ||||| Sbjct: 350 tccatatatagcaacagcttcgcaaaagatgacactgatgagattctt 303
>gb|AY072480.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 607 Score = 119 bits (60), Expect = 1e-23 Identities = 276/348 (79%) Strand = Plus / Minus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 540 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 481 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 480 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 421 Query: 348 atcagacagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagc 407 ||| |||| |||||| |||||||| || ||||| || |||| |||||| ||||| || || Sbjct: 420 atcggacaatgcacaactgcttccaatgattcctacacataacccgcatacaaggttggc 361 Query: 408 aaagccgacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatc 467 || || || |||| || || |||||||||||||| ||||||| | |||||| | ||| Sbjct: 360 gaatccaactataattccagatgcaaagattgcatatccagctctaagagactcagcatc 301 Query: 468 atgcattcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattac 527 || ||| || | ||| ||||| || | ||||||||| || |||||||| || || || Sbjct: 300 atacatctttgaagatgggacactctccaactttgtttgcagtatgattgcaacaataac 241 Query: 528 accataaattgcaacggcctcacagaagatgacactgatgaggttctt 575 ||||| || ||||| || || || ||||||||||||||||| ||||| Sbjct: 240 tccatatatagcaacagcttcgcaaaagatgacactgatgagattctt 193
>gb|AY042863.1| Arabidopsis thaliana H+-transporting ATPase-like protein (L23H3.10) mRNA, complete cds Length = 937 Score = 119 bits (60), Expect = 1e-23 Identities = 276/348 (79%) Strand = Plus / Minus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 650 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 591 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 590 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 531 Query: 348 atcagacagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagc 407 ||| |||| |||||| |||||||| || ||||| || |||| |||||| ||||| || || Sbjct: 530 atcggacaatgcacaactgcttccaatgattcctacacataacccgcatacaaggttggc 471 Query: 408 aaagccgacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatc 467 || || || |||| || || |||||||||||||| ||||||| | |||||| | ||| Sbjct: 470 gaatccaactataattccagatgcaaagattgcatatccagctctaagagactcagcatc 411 Query: 468 atgcattcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattac 527 || ||| || | ||| ||||| || | ||||||||| || |||||||| || || || Sbjct: 410 atacatctttgaagatgggacactctccaactttgtttgcagtatgattgcaacaataac 351 Query: 528 accataaattgcaacggcctcacagaagatgacactgatgaggttctt 575 ||||| || ||||| || || || ||||||||||||||||| ||||| Sbjct: 350 tccatatatagcaacagcttcgcaaaagatgacactgatgagattctt 303
>gb|AY226998.1| Arabidopsis thaliana vacuolar membrane ATPase subunit c'' (VMA16) mRNA, complete cds Length = 937 Score = 119 bits (60), Expect = 1e-23 Identities = 276/348 (79%) Strand = Plus / Minus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 650 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 591 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 590 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 531 Query: 348 atcagacagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagc 407 ||| |||| |||||| |||||||| || ||||| || |||| |||||| ||||| || || Sbjct: 530 atcggacaatgcacaactgcttccaatgattcctacacataacccgcatacaaggttggc 471 Query: 408 aaagccgacaataagacctgaggcaaagattgcataaccagctcgcatagactctggatc 467 || || || |||| || || |||||||||||||| ||||||| | |||||| | ||| Sbjct: 470 gaatccaactataattccagatgcaaagattgcatatccagctctaagagactcagcatc 411 Query: 468 atgcattcgggatgttggcacactttcaagctttgtttggaggatgattgccacgattac 527 || ||| || | ||| ||||| || | ||||||||| || |||||||| || || || Sbjct: 410 atacatctttgaagatgggacactctccaactttgtttgcagtatgattgcaacaataac 351 Query: 528 accataaattgcaacggcctcacagaagatgacactgatgaggttctt 575 ||||| || ||||| || || || ||||||||||||||||| ||||| Sbjct: 350 tccatatatagcaacagcttcgcaaaagatgacactgatgagattctt 303
>gb|AY462241.1| Xerophyta viscosa V-ATPase subunit c'' proteolipid (VHA-c''1) mRNA, complete cds Length = 534 Score = 105 bits (53), Expect = 2e-19 Identities = 131/157 (83%) Strand = Plus / Minus Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 ||||||||||| ||||| |||| ||||| |||||||| | ||||| || ||||| ||| Sbjct: 458 ctgccaaagatttcaattaccaaaatcttcacaaagagggaggaattttgagcatctgac 399 Query: 355 agtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagccg 414 ||||| || ||||||||||||||||| || || | ||| || |||||||| ||||| || Sbjct: 398 agtgcgcaactgcttccgattattccgacacaaagcccacatacaagatttgcaaaaccc 339 Query: 415 acaataagacctgaggcaaagattgcataaccagctc 451 ||||||| || || |||||||||||||||||||||| Sbjct: 338 acaataatcccagaagcaaagattgcataaccagctc 302 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 487 acactttcaagctttgtttggaggatgattgccacgattacaccataaattgcaacggcc 546 |||||||| | ||| ||||| | ||| ||||| || || || ||||| || ||||| ||| Sbjct: 266 acactttctaacttcgtttgcaagataattgcaactatgactccatatatagcaactgcc 207 Query: 547 tcacagaagatgacactgatgaggttcttggaggtgatcctgggcgccttgat 599 |||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 206 tcacagaagatgacgctgatgaggttcttagaagtgattctcggcgctttgat 154
>dbj|AK220736.1| Arabidopsis thaliana mRNA for H+-transporting ATPase like protein, complete cds, clone: RAFL22-10-H21 Length = 469 Score = 103 bits (52), Expect = 7e-19 Identities = 181/224 (80%) Strand = Plus / Minus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 270 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 211 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 210 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 151 Query: 348 atcagacagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagc 407 ||| |||| |||||| |||||||| || ||||| || |||| |||||| ||||| || || Sbjct: 150 atcggacaatgcacaactgcttccaatgattcctacacataacccgcatacaaggttggc 91 Query: 408 aaagccgacaataagacctgaggcaaagattgcataaccagctc 451 || || || |||| || || |||||||||||||| ||||||| Sbjct: 90 gaatccaactataattccagatgcaaagattgcatatccagctc 47
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence Length = 100745 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 |||||||| |||||||||||||| || || || ||||| |||||||| | || | |||| Sbjct: 18559 ggccatgtagcttgagctgacataataatcccaacgataactccaaataacccgagagca 18618 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 18619 ctcccaaagatctcaatcacaagaatcttaacaaagagcgtcgagttctgagcatcagac 18678 Query: 355 agtgcacagctgcttccgattattcc 380 | ||| || |||||||| || ||||| Sbjct: 18679 aatgcgcaactgcttccaatgattcc 18704 Score = 48.1 bits (24), Expect = 0.034 Identities = 108/136 (79%) Strand = Plus / Plus Query: 430 gcaaagattgcataaccagctcgcatagactctggatcatgcattcgggatgttggcaca 489 |||||||||||||| ||||||| | |||||| | ||||| ||| |||| ||| ||| Sbjct: 18852 gcaaagattgcatatccagctcttagagactcagcatcatacatctttgatgatggtaca 18911 Query: 490 ctttcaagctttgtttggaggatgattgccacgattacaccataaattgcaacggcctca 549 || || | ||| ||||| | ||||||||||| || ||||| || || || ||||| ||| Sbjct: 18912 ctctccaacttcgtttgtaatatgattgccacaataacaccgtatatagccacggcttca 18971 Query: 550 cagaagatgacactga 565 |||||||| ||||||| Sbjct: 18972 cagaagattacactga 18987
>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence Length = 111256 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Minus Query: 235 ggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagca 294 ||||||||||||||||||||||| || || || || || |||||||| ||||| | ||| Sbjct: 2846 ggccatgttgcttgagctgacataataattccaacaataactccaaataggccaagcgca 2787 Query: 295 ctgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcagac 354 || ||||||||||||||||| || || || || ||||| | || ||||| ||||||||| Sbjct: 2786 ctaccaaagatctcaatcacaagaattttcacgaagagagaggagttctgagcatcagac 2727 Query: 355 agtgcacagctgcttccgattat 377 | ||| || |||||||| ||||| Sbjct: 2726 aatgcgcaactgcttccaattat 2704 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 394 caaacaagattagcaaagccgacaataagacctgaggcaaagattgcataaccagctc 451 ||||||||||| || ||||| |||||||| || || |||||||||||||| ||||||| Sbjct: 2575 caaacaagatttgcgaagcccacaataagtccggaagcaaagattgcatatccagctc 2518
>gb|BT013555.1| Lycopersicon esculentum clone 132292R, mRNA sequence Length = 2040 Score = 83.8 bits (42), Expect = 6e-13 Identities = 174/218 (79%) Strand = Plus / Minus Query: 234 tggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcccaaagc 293 |||||| | |||||||||||||||||| || ||||| || || ||||| | || | || Sbjct: 1671 tggccaagatgcttgagctgacatgataattcccacaataacaccaaacaacccaagtgc 1612 Query: 294 actgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatcaga 353 ||| ||||| ||||| ||||| |||||||| || || |||| || || || |||||||| Sbjct: 1611 actaccaaaaatctcgatcacgaggatcttaacgaaaagtgaggagttttgtgcatcaga 1552 Query: 354 cagtgcacagctgcttccgattattcccacgcataccccgcaaacaagattagcaaagcc 413 | |||||||||||||| |||||||| ||||| | ||| || |||||||| ||||| || Sbjct: 1551 taaagcacagctgcttccaattattccaacgcacaacccacagacaagattggcaaatcc 1492 Query: 414 gacaataagacctgaggcaaagattgcataaccagctc 451 ||||| | || || ||||| |||||||| ||||||| Sbjct: 1491 cacaatgatcccagaagcaaaaattgcatagccagctc 1454
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 81.8 bits (41), Expect = 2e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 107412 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 107471 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 107472 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 107531 Query: 348 atcagacagtgcacagctgcttccgattattcc 380 ||| |||| |||||| |||||||| || ||||| Sbjct: 107532 atcggacaatgcacaactgcttccaatgattcc 107564
>emb|AL050398.1|ATL23H3 Arabidopsis thaliana DNA chromosome 4, cosmid clone L23H3 (ESSA project) Length = 36270 Score = 81.8 bits (41), Expect = 2e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 228 tttcgttggccatgttgcttgagctgacatgattatacccacgatcactccaaagaggcc 287 ||||||||||||||| ||||| || ||||| || || ||||| || |||||||| | || Sbjct: 9243 tttcgttggccatgtcgcttgtgcagacataataattcccacaataactccaaacaaccc 9302 Query: 288 caaagcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggc 347 | |||||| || || ||||| ||||| || ||||||||||| ||||| || ||||| || Sbjct: 9303 gagagcactcccgaatatctcgatcacaagaatctttacaaaaagtgtggagttctgagc 9362 Query: 348 atcagacagtgcacagctgcttccgattattcc 380 ||| |||| |||||| |||||||| || ||||| Sbjct: 9363 atcggacaatgcacaactgcttccaatgattcc 9395
>ref|XM_422414.1| PREDICTED: Gallus gallus similar to ATPase, H+ transporting, V0 subunit B; ATPase, H+ transporting, lysosomal (vacuolar proton pump); ATPase, H+ transporting, lysosomal 21kDa, V0 subunit B; lysosomal 21kDa (LOC424575), mRNA Length = 1348 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 292 gcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatca 351 ||||||||||||||||| | | ||||||||| |||||||| | | ||||||||||||| Sbjct: 998 gcactgccaaagatctccacgatcaggatcttgacaaagaggctgggattctgggcatca 939 Query: 352 g 352 | Sbjct: 938 g 938
>emb|CR407484.1| Gallus gallus finished cDNA, clone ChEST134n14 Length = 1007 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 292 gcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatca 351 ||||||||||||||||| | | ||||||||| |||||||| | | ||||||||||||| Sbjct: 657 gcactgccaaagatctccacgatcaggatcttgacaaagaggctgggattctgggcatca 598 Query: 352 g 352 | Sbjct: 597 g 597
>emb|BX934513.1| Gallus gallus finished cDNA, clone ChEST613n3 Length = 853 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 292 gcactgccaaagatctcaatcaccaggatctttacaaagagtgttgaattctgggcatca 351 ||||||||||||||||| | | ||||||||| |||||||| | | ||||||||||||| Sbjct: 510 gcactgccaaagatctccacgatcaggatcttgacaaagaggctgggattctgggcatca 451 Query: 352 g 352 | Sbjct: 450 g 450
>ref|XM_638545.1| Dictyostelium discoideum hypothetical protein (DDB0217733), partial mRNA Length = 3813 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 445 ccagctcgcatagactctggatcat 469 |||||| |||||||||||||||||| Sbjct: 2570 ccagcttgcatagactctggatcat 2546
>ref|XM_513108.1| PREDICTED: Pan troglodytes similar to Beta-1,4-galactosyltransferase 2 (Beta-1,4-GalTase 2) (Beta4Gal-T2) (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 2) (LOC456522), mRNA Length = 1653 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 176 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 124
>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete sequence Length = 155024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gcaaaagaaaaaagaatagat 143 ||||||||||||||||||||| Sbjct: 152932 gcaaaagaaaaaagaatagat 152912
>ref|XM_881497.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 8 (LOC531602), mRNA Length = 2304 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2207 aaaaatgtgcaaaagaaaaaa 2187
>ref|XM_881482.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 7 (LOC531602), mRNA Length = 2423 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2326 aaaaatgtgcaaaagaaaaaa 2306
>ref|XM_881466.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 6 (LOC531602), mRNA Length = 2159 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2062 aaaaatgtgcaaaagaaaaaa 2042
>ref|XM_881449.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 5 (LOC531602), mRNA Length = 1790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 1693 aaaaatgtgcaaaagaaaaaa 1673
>ref|XM_881422.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 3 (LOC531602), mRNA Length = 2420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2323 aaaaatgtgcaaaagaaaaaa 2303
>ref|NM_008468.2| Mus musculus karyopherin (importin) alpha 6 (Kpna6), mRNA Length = 5692 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2243 aaaaatgtgcaaaagaaaaaa 2223
>ref|NM_012316.3| Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA Length = 3984 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2268 aaaaatgtgcaaaagaaaaaa 2248
>gb|AY350713.1| Capsella rubella clone BAC Cr33L6, complete sequence Length = 74492 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 tgcaaaagaaaaaagaatagataag 146 ||||||||||||||| ||||||||| Sbjct: 22909 tgcaaaagaaaaaaggatagataag 22933
>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence Length = 209230 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||| |||||||||| Sbjct: 42397 aaaagaaaaaagaaaagataagaaa 42373
>gb|BC060703.1| Mus musculus microtubule associated serine/threonine kinase 2, mRNA (cDNA clone MGC:67101 IMAGE:6412811), complete cds Length = 5315 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 4359 cagaagatgacactgatgagg 4379
>gb|AC114258.3| Dictyostelium discoideum chromosome 2 map complement(427476-387492) strain AX4, complete sequence Length = 39984 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 445 ccagctcgcatagactctggatcat 469 |||||| |||||||||||||||||| Sbjct: 16926 ccagcttgcatagactctggatcat 16902
>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3, complete sequence Length = 226081 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaaa 149 ||||||||| ||||||||||||||| Sbjct: 142479 aaaagaaaatagaatagataagaaa 142503
>ref|XM_730760.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000263.03.0) partial mRNA Length = 591 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||||| |||||||| Sbjct: 81 aaaagaaaaaagaatacataagaaa 105
>ref|XM_544440.2| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 1 (LOC487314), mRNA Length = 2301 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2218 aaaaatgtgcaaaagaaaaaa 2198
>ref|XM_859701.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 2 (LOC487314), mRNA Length = 2355 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2272 aaaaatgtgcaaaagaaaaaa 2252
>gb|BC000423.2| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b, transcript variant 1, mRNA (cDNA clone MGC:8673 IMAGE:2964510), complete cds Length = 1003 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 360 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 308
>gb|BC005876.2| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b, transcript variant 1, mRNA (cDNA clone MGC:4498 IMAGE:2964510), complete cds Length = 1003 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 360 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 308
>gb|BC009169.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit B, mRNA (cDNA clone MGC:6568 IMAGE:2812497), complete cds Length = 1009 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 268 acgatcactccaaagaggcccaaagcactgccaaagatctc 308 ||||| || ||||||||||| | ||||||||||||||||| Sbjct: 672 acgatgaccccaaagaggccaatggcactgccaaagatctc 632
>emb|AL390715.23| Human DNA sequence from clone RP11-167O6 on chromosome 10 Contains the ARHGAP12 gene for Rho GTPase activating protein 12 and two CpG islands, complete sequence Length = 189161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gatttaccaaaaatgtgcaaa 127 ||||||||||||||||||||| Sbjct: 122527 gatttaccaaaaatgtgcaaa 122547
>emb|AL139138.17| Human DNA sequence from clone RP5-1034F7 on chromosome 1p33-34.3 Contains a novel gene, the EBNA1BP2 gene for EBNA1 binding protein 2 and the 5' end of gene FLJ32000, complete sequence Length = 77017 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||| |||||||||| Sbjct: 2393 aaaagaaaaaagaaaagataagaaa 2369
>emb|AL049795.21|HSDJ622L5 Human DNA sequence from clone RP4-622L5 on chromosome 1p34.2-36.11 Contains the 3' end of the KPNA6 gene for karyopherin alpha 6 (importin alpha 7), a novel gene (DKFZp451J0118), a novel gene (MGC1203) a novel gene, a novel gene (FLJ10547), a novel gene, a novel gene, the 5' end of the EIF3S2 gene for eukaryotic translation initiation factor 3 subunit 2 beta 36kDa and 3 CpG islands, complete sequence Length = 115756 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 60804 aaaaatgtgcaaaagaaaaaa 60784
>emb|CR847825.6| Zebrafish DNA sequence from clone DKEY-98D20 in linkage group 6, complete sequence Length = 113362 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataa 145 ||||||||||||||||||||| Sbjct: 10064 aaaagaaaaaagaatagataa 10044
>gb|BT008194.1| Synthetic construct Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c'' mRNA, partial cds Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>gb|BT007151.1| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c'' mRNA, complete cds Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>emb|CR858533.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0723 (from clone DKFZp469C0723) Length = 3763 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2253 aaaaatgtgcaaaagaaaaaa 2233
>emb|CR615700.1| full-length cDNA clone CS0DF010YG10 of Fetal brain of Homo sapiens (human) Length = 944 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 340 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 288
>ref|NM_001038038.1| Bos taurus ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b (ATP6V0B), mRNA Length = 1098 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| ||||| |||||||| | |||||||||| ||||| Sbjct: 381 gcctcacagaagatgatactgaccaggttcttagtcttgatcctgggggcctt 329
>dbj|AK128609.1| Homo sapiens cDNA FLJ46768 fis, clone TRACH3025316, highly similar to Importin alpha-6 subunit Length = 3937 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2244 aaaaatgtgcaaaagaaaaaa 2224
>emb|CR621763.1| full-length cDNA clone CS0DL005YK01 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 977 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 371 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 319
>emb|CR613387.1| full-length cDNA clone CS0DM003YJ24 of Fetal liver of Homo sapiens (human) Length = 1685 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 393 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 341
>emb|CR601146.1| full-length cDNA clone CS0DC020YJ01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 957 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 371 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 319
>emb|CR599148.1| full-length cDNA clone CS0DA010YJ24 of Neuroblastoma of Homo sapiens (human) Length = 988 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 382 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 330
>emb|CR596289.1| full-length cDNA clone CS0DI035YO13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1703 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 358 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 306
>emb|CR591603.1| full-length cDNA clone CS0DC024YO20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 994 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 386 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 334
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence Length = 191805 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataa 145 ||||||||||||||||||||| Sbjct: 47906 aaaagaaaaaagaatagataa 47926
>gb|AC109809.3| Homo sapiens chromosome 15, clone CTD-2240J17, complete sequence Length = 116491 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||| |||||||||| Sbjct: 37478 aaaagaaaaaagaaaagataagaaa 37502
>ref|NM_008641.1| Mus musculus microtubule associated serine/threonine kinase 2 (Mast2), mRNA Length = 5374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 4441 cagaagatgacactgatgagg 4461
>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence Length = 120910 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 aagaaacagttgaatacatgttgac 168 |||||||||||||||||||| |||| Sbjct: 42537 aagaaacagttgaatacatgatgac 42561
>dbj|AK154882.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110I06 product:karyopherin (importin) alpha 6, full insert sequence Length = 5692 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2243 aaaaatgtgcaaaagaaaaaa 2223
>gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, complete sequence Length = 84326 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aagaaacagttgaatacatgttgac 168 |||||||||||||||||||| |||| Sbjct: 5810 aagaaacagttgaatacatgatgac 5786
>gb|AC008703.6| Homo sapiens chromosome 5 clone CTB-76P12, complete sequence Length = 214187 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||| |||||||||| Sbjct: 202416 aaaagaaaaaagaagagataagaaa 202392
>emb|CR456972.1| Homo sapiens full open reading frame cDNA clone RZPDo834C025D for gene ATP6V0B, ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c''; complete cds, incl. stopcodon Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>gb|BC053601.1| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b, mRNA (cDNA clone IMAGE:5767662) Length = 2463 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 1058 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 1006
>gb|BC042664.1| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b, mRNA (cDNA clone IMAGE:5180100), with apparent retained intron Length = 1723 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 1057 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 1005
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||| |||||||||| Sbjct: 107411 aaaagaaaaaagaaaagataagaaa 107387
>gb|BC111150.1| Bos taurus cDNA clone MGC:134511 IMAGE:8052124, complete cds Length = 1098 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| ||||| |||||||| | |||||||||| ||||| Sbjct: 381 gcctcacagaagatgatactgaccaggttcttagtcttgatcctgggggcctt 329
>ref|NM_004047.3| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b (ATP6V0B), transcript variant 1, mRNA Length = 1028 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 407 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 355
>ref|NM_001039457.1| Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b (ATP6V0B), transcript variant 2, mRNA Length = 979 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 358 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 306
>gb|AC174442.3| Mus musculus BAC clone RP24-542K12 from chromosome y, complete sequence Length = 195770 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaaa 149 |||||||||||||||||| |||||| Sbjct: 164340 aaaagaaaaaagaatagaaaagaaa 164364
>dbj|AK004728.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200012K12 product:microtubule associated testis specific serine/threonine protein kinase, full insert sequence Length = 3213 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 2281 cagaagatgacactgatgagg 2301
>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence Length = 200028 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gcaaaagaaaaaagaatagat 143 ||||||||||||||||||||| Sbjct: 132856 gcaaaagaaaaaagaatagat 132836
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 71691 aaaaatgtgcaaaagaaaaaa 71711
>ref|XM_216510.3| PREDICTED: Rattus norvegicus ATPase, H+ transporting, V0 subunit B (predicted) (Atp6v0b_predicted), mRNA Length = 1228 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 268 acgatcactccaaagaggcccaaagcactgccaaagatctc 308 ||||| || ||||||||||| | ||||||||||||||||| Sbjct: 902 acgatgaccccaaagaggccaatggcactgccaaagatctc 862
>ref|XM_233782.3| PREDICTED: Rattus norvegicus microtubule associated serine/threonine kinase 2 (predicted) (Mast2_predicted), mRNA Length = 5456 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 4535 cagaagatgacactgatgagg 4555
>gb|AY892285.1| Synthetic construct Homo sapiens clone FLH015432.01L ATPase H+ transporting lysosomal 21kDa V0 subunit c'' (ATP6V0B) mRNA, partial cds Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>gb|AY889818.1| Synthetic construct Homo sapiens clone FLH015437.01X ATPase lysosomal V0 subunit c'' (ATP6V0B) mRNA, complete cds Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>gb|AY889817.1| Synthetic construct Homo sapiens clone FLH015436.01X ATPase lysosomal V0 subunit c'' (ATP6V0B) mRNA, complete cds Length = 618 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 296 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 244
>gb|BC020520.1| Homo sapiens karyopherin alpha 6 (importin alpha 7), mRNA (cDNA clone MGC:17918 IMAGE:3913864), complete cds Length = 3967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 2256 aaaaatgtgcaaaagaaaaaa 2236
>dbj|AP001258.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-103D1, complete sequence Length = 128654 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 127 aagaaaaaagaatagataagaaacagttg 155 |||||||||||| ||| |||||||||||| Sbjct: 108856 aagaaaaaagaaaagaaaagaaacagttg 108884
>dbj|AB093264.1| Mus musculus mRNA for mKIAA0807 protein Length = 4353 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 3421 cagaagatgacactgatgagg 3441
>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence Length = 194685 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 aagaatagataagaaacagtt 154 ||||||||||||||||||||| Sbjct: 152493 aagaatagataagaaacagtt 152513
>gb|U02313.1|MMU02313 Mus musculus MAST205 protein kinase mRNA, complete cds Length = 5374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 4441 cagaagatgacactgatgagg 4461
>emb|AL670603.6| Mouse DNA sequence from clone RP23-276M23 on chromosome 4, complete sequence Length = 173696 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 550 cagaagatgacactgatgagg 570 ||||||||||||||||||||| Sbjct: 147330 cagaagatgacactgatgagg 147310
>dbj|D89052.1| Homo sapiens mRNA for proton-ATPase-like protein, complete cds Length = 987 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 544 gcctcacagaagatgacactgatgaggttcttggaggtgatcctgggcgcctt 596 |||||||||||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 378 gcctcacagaagatgatgctgaccaggttcttggtcttgatcctgggggcctt 326
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 aaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||||||| Sbjct: 77409 aaaaatgtgcaaaagaaaaaa 77429
>gb|AY622316.1| Micraira subulifolia NADH dehydrogenase subunit F (ndhF) gene, partial cds; chloroplast Length = 2158 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 agaaaaaagaatagataaga 147 |||||||||||||||||||| Sbjct: 2121 agaaaaaagaatagataaga 2102
>gb|AC104202.13| Mus musculus chromosome 5, clone RP24-558F5, complete sequence Length = 189841 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 atgtgcaaaagaaaaaagaa 138 |||||||||||||||||||| Sbjct: 166001 atgtgcaaaagaaaaaagaa 165982
>ref|XM_515337.1| PREDICTED: Pan troglodytes LOC459077 (LOC459077), mRNA Length = 5421 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 4644 agaagatgacactgatgagg 4663
>gb|AC153633.10| Mus musculus 6 BAC RP23-13K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216841 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaatgtgcaaaagaaaaaa 135 |||||||||||||||||||| Sbjct: 57359 aaaatgtgcaaaagaaaaaa 57378
>gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0070D17 map G44, complete sequence Length = 135627 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagata 144 |||||||||||||||||||| Sbjct: 67267 aaaagaaaaaagaatagata 67248
>gb|AC132870.10| Mus musculus chromosome 15, clone RP24-206L11, complete sequence Length = 138560 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaaaatgtgcaaaagaaaaaagaa 138 ||||||||||||||||| |||||| Sbjct: 127799 aaaaatgtgcaaaagaagaaagaa 127822
>ref|XM_454320.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E08173g predicted mRNA Length = 1461 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 tggtattagactttcgttggccat 240 ||||||||||||||| |||||||| Sbjct: 1128 tggtattagactttctttggccat 1105
>ref|NM_018263.3| Homo sapiens additional sex combs like 2 (Drosophila) (ASXL2), mRNA Length = 7231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3796 agaagatgacactgatgagg 3815
>ref|NM_170742.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 3, mRNA Length = 4025 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 3352 aaaagaaaaaagaaaagaaaagaaacag 3325
>ref|NM_170741.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 2, mRNA Length = 3926 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 3264 aaaagaaaaaagaaaagaaaagaaacag 3237
>ref|NM_018658.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16 (KCNJ16), transcript variant 1, mRNA Length = 4021 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 3345 aaaagaaaaaagaaaagaaaagaaacag 3318
>gb|AF139637.1| Xanthophyllomyces dendrorhous strain CBS 6938 28S ribosomal RNA gene, and 28S-5S ribosomal RNA intergenic spacer 1, partial sequence Length = 641 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 aaagaaaaaagaatagataagaaa 149 ||||||||||||||||| |||||| Sbjct: 331 aaagaaaaaagaatagagaagaaa 308
>gb|AF139633.1| Xanthophyllomyces dendrorhous strain CBS 7918 28S ribosomal RNA gene, and 28S-5S ribosomal RNA intergenic spacer 1, partial sequence Length = 680 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 aaagaaaaaagaatagataagaaa 149 ||||||||||||||||| |||||| Sbjct: 331 aaagaaaaaagaatagagaagaaa 308
>gb|AC129570.10| Mus musculus chromosome 14, clone RP23-343H21, complete sequence Length = 198703 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 accaaaaatgtgcaaaagaaaaaa 135 ||||||||||||||||| |||||| Sbjct: 104620 accaaaaatgtgcaaaaaaaaaaa 104597
>ref|XM_857664.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 7 (LOC482528), mRNA Length = 951 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 623 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 568
>ref|XM_857637.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 6 (LOC482528), mRNA Length = 810 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 482 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 427
>ref|XM_857617.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 5 (LOC482528), mRNA Length = 953 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 692 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 637
>ref|XM_857590.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 4 (LOC482528), mRNA Length = 926 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 665 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 610
>ref|XM_857564.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 3 (LOC482528), mRNA Length = 679 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 351 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 296
>ref|XM_539645.2| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal 21kDa, V0 subunit c, transcript variant 2 (LOC482528), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 8.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctcaatcaccaggatctttacaaagag 332 ||||||||||| | ||||||||||||||||| | | || |||||||||||||| Sbjct: 698 ccaaagaggccaatggcactgccaaagatctccacgataagaatctttacaaagag 643
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 acaaagagtgttgaattctg 344 |||||||||||||||||||| Sbjct: 89102 acaaagagtgttgaattctg 89083
>gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, complete sequence Length = 187791 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||| ||||||||||||| ||||||||| Sbjct: 35340 aaaataaaaaagaatagaaaagaaacag 35313
>gb|AC124757.4| Mus musculus BAC clone RP23-116P5 from 8, complete sequence Length = 210427 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaaaatgtgcaaaagaaaaaagaa 138 ||||||||||||||||| |||||| Sbjct: 9659 aaaaatgtgcaaaagaagaaagaa 9682
>emb|CR937053.2|RN476F3 Rattus norvegicus chromosome 1 BAC CH230-476F3, complete sequence Length = 139452 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tgggcatcagacagtgcaca 362 |||||||||||||||||||| Sbjct: 34282 tgggcatcagacagtgcaca 34301
>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the 3' end of a novel gene for thyroid hormone receptor-associated protein, 150 kDa subunit (TRAP150) (FLJ22082), a novel transcript (FLJ22938), a gene for a novel protein (FLJ10647), the 3' end of a gene for Ser/Thr-like kinase (MGC4796) and two CpG islands, complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gatcactccaaagaggccca 289 |||||||||||||||||||| Sbjct: 89632 gatcactccaaagaggccca 89651
>gb|BC030393.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit B, mRNA (cDNA clone MGC:40642 IMAGE:4922226), complete cds Length = 1027 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 647 ccaaagaggccaatggcactgccaaagatctc 616
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3' end of the MGST3 gene for microsomal glutathione S-transferase 3, the ALDH9A1 gene for aldehyde dehydrogenase 9 family (member A1), a ribosomal protein S13 (RPS13) pseudogene, a ribosomal protein L21 (RPL21) pseudogene, two novel genes (FLJ42974), a carbonic anhydrase XIV (CA14) pseudogene, the gene for putative membrane protein (LOC54499), a ribosomal protein L26 (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the UMPK gene for uridine monophosphate kinase and two CpG islands, complete sequence Length = 188217 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 57902 aaaagaaaaaagaaaagaaaagaaacag 57929
>emb|AL359699.12| Human DNA sequence from clone RP11-130F5 on chromosome 1 Contains a SLAM family member 6 (SLAMF6) pseudogene, the gene for kinase interacting with leukemia-associated gene (KIS) and two CpG islands, complete sequence Length = 105902 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 aaaagaaaaaagaatagataagaa 148 |||||||||||||||||| ||||| Sbjct: 49224 aaaagaaaaaagaatagaaaagaa 49247
>emb|AL357832.11| Human DNA sequence from clone RP11-125D12 on chromosome 6 Contains 2 novel genes, complete sequence Length = 147458 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaatgtgcaaaagaaaaaa 135 |||||||||||||||||||| Sbjct: 26161 aaaatgtgcaaaagaaaaaa 26180
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tggtattagactttcgttggccat 240 ||||||||||||||| |||||||| Sbjct: 740546 tggtattagactttctttggccat 740569
>gb|BC042999.2| Homo sapiens additional sex combs like 2 (Drosophila), mRNA (cDNA clone MGC:44431 IMAGE:5297392), complete cds Length = 3316 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 2419 agaagatgacactgatgagg 2438
>gb|BC033038.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 16, transcript variant 3, mRNA (cDNA clone MGC:33717 IMAGE:5262150), complete cds Length = 4024 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 3351 aaaagaaaaaagaaaagaaaagaaacag 3324
>emb|CR933613.1| Homo sapiens mRNA; cDNA DKFZp686C1968 (from clone DKFZp686C1968) Length = 7231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3796 agaagatgacactgatgagg 3815
>dbj|AB084281.1| Homo sapiens mRNA for chimeric MOZ-ASXH2 fusion protein, complete cds Length = 9718 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 6303 agaagatgacactgatgagg 6322
>dbj|AK001760.1| Homo sapiens cDNA FLJ10898 fis, clone NT2RP5003492 Length = 4281 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 865 agaagatgacactgatgagg 884
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 tggaggtgatcctgggcgcc 594 |||||||||||||||||||| Sbjct: 3664752 tggaggtgatcctgggcgcc 3664771
>gb|AY965679.1| Eptatretus burgeri variable lymphocyte receptor B (VLRB) gene, complete cds Length = 91972 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 ctttgtttggaggatgattg 517 |||||||||||||||||||| Sbjct: 35590 ctttgtttggaggatgattg 35609
>dbj|AK151847.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830040I06 product:ATPase, H+ transporting, V0 subunit B, full insert sequence Length = 983 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 650 ccaaagaggccaatggcactgccaaagatctc 619
>dbj|AK152823.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830086M23 product:ATPase, H+ transporting, V0 subunit B, full insert sequence Length = 987 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 650 ccaaagaggccaatggcactgccaaagatctc 619
>gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complete sequence Length = 165723 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gcaaaagaaaaaagaataga 142 |||||||||||||||||||| Sbjct: 20133 gcaaaagaaaaaagaataga 20152
>dbj|AK152330.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830062H05 product:ATPase, H+ transporting, V0 subunit B, full insert sequence Length = 1000 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 667 ccaaagaggccaatggcactgccaaagatctc 636
>dbj|AK151365.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028J18 product:ATPase, H+ transporting, V0 subunit B, full insert sequence Length = 966 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 633 ccaaagaggccaatggcactgccaaagatctc 602
>dbj|AK155374.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630222N24 product:unclassifiable, full insert sequence Length = 3995 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 acaaagagtgttgaattctg 344 |||||||||||||||||||| Sbjct: 2270 acaaagagtgttgaattctg 2251
>dbj|AK170493.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630105L04 product:ATPase, H+ transporting, V0 subunit B, full insert sequence Length = 2993 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 2196 ccaaagaggccaatggcactgccaaagatctc 2165
>gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, complete sequence Length = 184194 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 caaaagaaaaaagaatagataaga 147 ||||||||||||||||||| |||| Sbjct: 85555 caaaagaaaaaagaatagaaaaga 85578
>gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, complete sequence Length = 128642 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 caaaagaaaaaagaatagataaga 147 ||||||||||||||||||| |||| Sbjct: 100967 caaaagaaaaaagaatagaaaaga 100944
>gb|AF356007.1|AF356007 Mus musculus vacuolar proton-translocating ATPase 21 kDa subunit gene, complete cds Length = 4545 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 3928 ccaaagaggccaatggcactgccaaagatctc 3897
>dbj|AK009495.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310024H13 product:ATPase, H+ transporting, lysosomal (vacuolar proton pump), full insert sequence Length = 990 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 653 ccaaagaggccaatggcactgccaaagatctc 622
>emb|BX537290.9| Zebrafish DNA sequence from clone DKEY-89K1 in linkage group 5, complete sequence Length = 180630 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaatgtgcaaaagaaaaaa 135 |||||||||||||||||||| Sbjct: 81388 aaaatgtgcaaaagaaaaaa 81369
>dbj|AK029192.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831412M21 product:unclassifiable, full insert sequence Length = 3253 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 aaagaaaaaagaatagataagaaa 149 ||||||||||||| |||||||||| Sbjct: 2496 aaagaaaaaagaaaagataagaaa 2473
>ref|NM_001003852.1| Danio rerio Iglon2 (LOC445375), mRNA Length = 1941 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ttaccaaaaatgtgcaaaagaaaa 133 ||||||||||||||||||| |||| Sbjct: 1280 ttaccaaaaatgtgcaaaacaaaa 1303
>dbj|AK021272.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530010I21 product:ATPase, H+ transporting, lysosomal (vacuolar proton pump), full insert sequence Length = 980 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 642 ccaaagaggccaatggcactgccaaagatctc 611
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 caaaaatgtgcaaaagaaaaaagaatag 141 |||| ||||| ||||||||||||||||| Sbjct: 22273359 caaatatgtgaaaaagaaaaaagaatag 22273332
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagata 144 |||||||||||||||||||| Sbjct: 9800035 aaaagaaaaaagaatagata 9800016
>gb|AF153816.1|AF153816 Homo sapiens clone 2 inwardly-rectifying potassium channel Kir5.1 (KCNJ16) mRNA, complete cds Length = 4021 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 3345 aaaagaaaaaagaaaagaaaagaaacag 3318
>gb|AF153814.1|AF153809S6 Homo sapiens inwardly-rectifying potassium channel Kir5.1 (KCNJ16) gene, exon 5 and complete cds, alternatively spliced Length = 3642 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 2964 aaaagaaaaaagaaaagaaaagaaacag 2937
>emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tccaaagaggcccaaagcac 295 |||||||||||||||||||| Sbjct: 22 tccaaagaggcccaaagcac 41
>gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, complete sequence Length = 176209 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 caaaaatgtgcaaaagaaaa 133 |||||||||||||||||||| Sbjct: 162388 caaaaatgtgcaaaagaaaa 162369
>gb|AC109597.3| Homo sapiens chromosome 16 clone CTD-2583P5, complete sequence Length = 169587 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 aatcaccaggatctttacaa 328 |||||||||||||||||||| Sbjct: 69571 aatcaccaggatctttacaa 69552
>gb|AC010150.3| Homo sapiens BAC clone RP11-404P12 from 2, complete sequence Length = 173893 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 51681 agaagatgacactgatgagg 51700
>dbj|AB051472.2| Homo sapiens mRNA for KIAA1685 protein, partial cds Length = 7174 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3752 agaagatgacactgatgagg 3771
>gb|AC062015.7| Homo sapiens BAC clone CTD-2031E17 from 2, complete sequence Length = 144223 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaa 148 |||||||||||||| ||||||||| Sbjct: 66396 aaaagaaaaaagaaaagataagaa 66373
>gb|AC008085.1|AC008085 Homo sapiens clone UWGC:djs228 from 7q31, complete sequence Length = 177286 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 caaaaatgtgcaaaagaaaa 133 |||||||||||||||||||| Sbjct: 106066 caaaaatgtgcaaaagaaaa 106085
>dbj|AK212370.1| Mus musculus cDNA, clone:Y2G0124L14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 397 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 76 ccaaagaggccaatggcactgccaaagatctc 45
>dbj|AK210235.1| Mus musculus cDNA, clone:Y2G0117L23, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 406 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 84 ccaaagaggccaatggcactgccaaagatctc 53
>dbj|AK208636.1| Mus musculus cDNA, clone:Y2G0112E11, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 387 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 95 ccaaagaggccaatggcactgccaaagatctc 64
>dbj|AK206535.1| Mus musculus cDNA, clone:Y2G0105C23, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 390 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 76 ccaaagaggccaatggcactgccaaagatctc 45
>dbj|AK205813.1| Mus musculus cDNA, clone:Y2G0102N20, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 400 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 84 ccaaagaggccaatggcactgccaaagatctc 53
>dbj|AK189647.1| Mus musculus cDNA, clone:Y0G0149O07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000036380, based on BLAT search Length = 422 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 76 ccaaagaggccaatggcactgccaaagatctc 45
>emb|BX647527.1|HSM807673 Homo sapiens mRNA; cDNA DKFZp686F074 (from clone DKFZp686F074) Length = 7264 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3825 agaagatgacactgatgagg 3844
>emb|BX648218.1|HSM808366 Homo sapiens mRNA; cDNA DKFZp686L2369 (from clone DKFZp686L2369) Length = 8910 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3777 agaagatgacactgatgagg 3796
>dbj|AB084279.1| Homo sapiens ASXH2 mRNA for polycomb group protein, complete cds Length = 7030 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 agaagatgacactgatgagg 570 |||||||||||||||||||| Sbjct: 3615 agaagatgacactgatgagg 3634
>emb|BX897713.10| Zebrafish DNA sequence from clone DKEY-217M24 in linkage group 4, complete sequence Length = 52569 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 aaatgtgcaaaagaaaaaagaata 140 ||||||||||||||||||| |||| Sbjct: 44792 aaatgtgcaaaagaaaaaaaaata 44815
>emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14, complete sequence Length = 194053 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 tttaccaaaaatgtgcaaaa 128 |||||||||||||||||||| Sbjct: 171494 tttaccaaaaatgtgcaaaa 171475
>emb|AL929094.13| Mouse DNA sequence from clone RP23-33L3 on chromosome 2, complete sequence Length = 166610 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 accaaaaatgtgcaaaagaaaaaa 135 |||||||| ||||||||||||||| Sbjct: 89778 accaaaaaagtgcaaaagaaaaaa 89801
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 acaaagagtgttgaattctg 344 |||||||||||||||||||| Sbjct: 163789 acaaagagtgttgaattctg 163808
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagata 144 |||||||||||||||||||| Sbjct: 9871732 aaaagaaaaaagaatagata 9871713
>gb|AC005208.1|AC005208 Homo sapiens chromosome 17, clone hRPK.1064_E_11, complete sequence Length = 123211 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 125 aaaagaaaaaagaatagataagaaacag 152 |||||||||||||| ||| ||||||||| Sbjct: 110142 aaaagaaaaaagaaaagaaaagaaacag 110115
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 114 caaaaatgtgcaaaagaaaaaagaatag 141 |||| ||||| ||||||||||||||||| Sbjct: 24261 caaatatgtgaaaaagaaaaaagaatag 24234
>gb|AC132372.4| Mus musculus BAC clone RP23-478B10 from 8, complete sequence Length = 178694 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 aaaaatgtgcaaaagaaaaaagaa 138 ||||||||||||||||| |||||| Sbjct: 137424 aaaaatgtgcaaaagaagaaagaa 137447
>gb|AF241638.1| Danio rerio neurotrimin mRNA, complete cds Length = 1941 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ttaccaaaaatgtgcaaaagaaaa 133 ||||||||||||||||||| |||| Sbjct: 1280 ttaccaaaaatgtgcaaaacaaaa 1303
>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 178961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aaaatgtgcaaaagaaaaaa 135 |||||||||||||||||||| Sbjct: 17389 aaaatgtgcaaaagaaaaaa 17370
>emb|AL627128.16| Mouse DNA sequence from clone RP23-133J9 on chromosome 4, complete sequence Length = 183089 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 123958 ccaaagaggccaatggcactgccaaagatctc 123989
>gb|AY924303.1|AY924299S5 Xenopus laevis mitochondrial malate dehydrogenase 2b (Mdh2b) gene, exons 8, 9 and complete cds; nuclear gene for mitochondrial product Length = 1018 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tgcaaaagaaaaaagaatag 141 |||||||||||||||||||| Sbjct: 329 tgcaaaagaaaaaagaatag 310
>dbj|AB060655.1| Mus musculus Atp6f gene for 23-kDa subunit of V-ATPase, complete cds Length = 4091 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 2640 ccaaagaggccaatggcactgccaaagatctc 2609
>dbj|AB060654.1| Mus musculus Atp6f mRNA for 23-kDa proteolipid, complete cds Length = 956 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 277 ccaaagaggcccaaagcactgccaaagatctc 308 ||||||||||| | ||||||||||||||||| Sbjct: 623 ccaaagaggccaatggcactgccaaagatctc 592
>emb|AL731857.9| Mouse DNA sequence from clone RP23-106A3 on chromosome 2, complete sequence Length = 157220 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 aaagaaaaaagaatagataagaaa 149 ||||||||||||| |||||||||| Sbjct: 49320 aaagaaaaaagaaaagataagaaa 49297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,273,384 Number of Sequences: 3902068 Number of extensions: 6273384 Number of successful extensions: 190556 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 189864 Number of HSP's gapped (non-prelim): 673 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
