ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18p07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 686 bits (346), Expect = 0.0 Identities = 487/530 (91%), Gaps = 3/530 (0%) Strand = Plus / Minus Query: 135 atactaactacatgacgggataagcaccgtacatggccatgccacacagcccgcggggcc 194 ||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 1153 atactaactacatgacggggtaggcaccgtacatggcgatgccacacagcccgcggggcc 1094 Query: 195 cgtcggctcccctacgcatgaagaagaagccattctggccccacgtctggccccacgagt 254 ||||||||||||| |||| |||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 1093 cgtcggctcccctgcgcacgaagaagaagcccttctgaccccaggtctgtccccacgagt 1034 Query: 255 tcttggcgatccagtactcttctccggcgccggtgaccccgtagccgaccaccgtcacca 314 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1033 tcttggcgatccagtactcttctccggcaccggtgactccgtagccgaccaccgtcacca 974 Query: 315 cgtggttctggctggtggtgcacggccccttgtacacgccggatttgtagttctgcagca 374 ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| | Sbjct: 973 cgtggttctggctggtggtgcacggccccctgtacacgccggacttgtagtcctgcagga 914 Query: 375 cggagccgctcccgtcgatctggacggtcaccggcgtcctgagcacggccagcgccagcg 434 ||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| | Sbjct: 913 cggggccgctcccgtcgatctggacggtcaccggcctcccgagcac-gccagcgccag-g 856 Query: 435 cgttctcgttgctccccggctgcacgtcctggacgccggtgatcttgccgatgcgtcggg 494 | ||||| |||| |||||| | || ||||||||||||||||| ||||||| || |||| Sbjct: 855 ggctctcgctgctgcccggccgtacatcctggacgccggtgattttgccgacacg-cggg 797 Query: 495 cagcgtcgtgcaccgtgcatctgcctcgcttggccacgtaggggtactcggcctccgtga 554 | | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 796 ctgtgtcgtgcaccgcgcatctgcctcgcttggccatgtaggggtactcggcctccgtga 737 Query: 555 ggaggccaccttttgatttgatccactggagtgcgctcttgggccacccgtagccgcacg 614 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 736 ggaggcccccttttgatttgatccatgcgagtgcgctcttgggccacccgtagccgcatg 677 Query: 615 gcgagctgaacacacccgtgctgcagtccaccagctcttgcaccgacagg 664 ||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 676 gcgagctgaacacgcccgtgctgcagtccaccagctcctgcacggacagg 627
>ref|NM_183859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 983 ccccacgtcttgccccacgagttcttggctatccagtact 944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 12728727 ccccacgtcttgccccacgagttcttggctatccagtact 12728766 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagtact 272 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 6395235 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 6395280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||||||||||||||||||| Sbjct: 6400964 gccccacgagttcttggcgatccagtact 6400936 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 13826295 ccccacgtctttccccacgagttcttggcgacccagtact 13826256 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 39495697 gccccacgagttcttgacgatccagtactc 39495668 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 13843214 ccacgagttcttggcgatccagtact 13843189 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 13821085 ccacgagttcttggcgatccagtact 13821110 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 12735936 ccacgagttcttggcgatccagtact 12735911 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 13830962 ccccacgtcttaccccacgagttcttggccagccagtact 13831001
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 9126 ccccacgtcttgccccacgagttcttggctatccagtact 9165 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 16335 ccacgagttcttggcgatccagtact 16310
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| |||||||||||||||||| |||||||||| Sbjct: 95756 ccccacgtcttgccccacgagttcttggctatccagtact 95795 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 102965 ccacgagttcttggcgatccagtact 102940
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1052 ccccacttctcgccccacgagttcttggcgatccagtact 1013
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagtact 272 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 965 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 920
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagtact 272 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 17630 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 17675 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||||||||||||||||||| Sbjct: 23359 gccccacgagttcttggcgatccagtact 23331
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagtact 272 |||| ||||||||||| |||||||||||||||||| | |||||||| Sbjct: 166301 ttctcgccccacgtcttgccccacgagttcttggccacccagtact 166346 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||||||||||||||||||| Sbjct: 172030 gccccacgagttcttggcgatccagtact 172002
>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA Length = 1101 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||||||||||||||||||| Sbjct: 999 gccccacgagttcttggcgatccagtact 971
>gb|AY253445.1| Triticum aestivum P9346A1-2-5-1 putative thiol protease mRNA, partial cds Length = 560 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtactc 273 |||||| ||| ||||||||||||| |||||||||||||||| Sbjct: 429 ccccacttctcgccccacgagttcctggcgatccagtactc 389
>ref|NM_183998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 938 ccccacgtctttccccacgagttcttggcgacccagtact 899
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||||| |||||||| Sbjct: 63698 ccccacgtctttccccacgagttcttggcgacccagtact 63659 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 80617 ccacgagttcttggcgatccagtact 80592 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 58488 ccacgagttcttggcgatccagtact 58513 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Plus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 68365 ccccacgtcttaccccacgagttcttggccagccagtact 68404
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagta 270 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 637 ttctcgccccacttctcgccccacgagttcttgacgatccagta 594
>gb|M95060.1|MZEORFA Zea mays putative thiol protease homolog mRNA, partial cds Length = 171 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 227 ttctggccccacgtctggccccacgagttcttggcgatccagta 270 |||| ||||||| ||| |||||||||||||||| |||||||||| Sbjct: 112 ttctcgccccacttctcgccccacgagttcttgacgatccagta 69
>ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 981 ccacgagttcttggcgatccagtact 956
>ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 999 ccacgagttcttggcgatccagtact 974
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 960 gccccacgagttcttgacgatccagtactc 931
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 50139 gccccacgagttcttgacgatccagtactc 50110
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 70711 gccccacgagttcttgacgatccagtactc 70682
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 247 ccacgagttcttggcgatccagtact 272 |||||||||||||||||||||||||| Sbjct: 3516 ccacgagttcttggcgatccagtact 3491
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 1924 gccccacgagttcttgacgatccagtactc 1895
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 970 gccccacgagttcttgacgatccagtactc 941
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtactc 273 |||||||||||||||| ||||||||||||| Sbjct: 1886 gccccacgagttcttgacgatccagtactc 1857
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 34062 gccccacgagttcttgacgatccagtact 34034
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 1074 gccccacgagttcttgacgatccagtact 1046
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 8298338 gccccacgagttcttgacgatccagtact 8298366 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 agccgctcccgtcgatctggacgg 401 ||||||||| |||||||||||||| Sbjct: 7706990 agccgctccggtcgatctggacgg 7707013
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 1080 gccccacgagttcttgacgatccagtact 1052
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 2596 gccccacgagttcttgacgatccagtact 2568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 244 gccccacgagttcttggcgatccagtact 272 |||||||||||||||| |||||||||||| Sbjct: 8369101 gccccacgagttcttgacgatccagtact 8369129 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 agccgctcccgtcgatctggacgg 401 ||||||||| |||||||||||||| Sbjct: 7777077 agccgctccggtcgatctggacgg 7777100
>ref|NM_184000.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 233 ccccacgtctggccccacgagttcttggcgatccagtact 272 |||||||||| ||||||||||||||||| | |||||||| Sbjct: 935 ccccacgtcttaccccacgagttcttggccagccagtact 896
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 615 gcgagctgaacacacccgtgctgc 638 |||||||||||||||||||||||| Sbjct: 3667525 gcgagctgaacacacccgtgctgc 3667548
>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence Length = 268433 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 245 ccccacgagttcttggcgatccagtact 272 ||||||||||||||| |||||||||||| Sbjct: 152882 ccccacgagttcttgacgatccagtact 152855
>dbj|AB091669.1| Pandalus borealis PbCys mRNA for crustapain, complete cds Length = 1242 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 245 ccccacgagttcttggcgatccagtactcttctccg 280 ||||||||||||||| |||||||||| ||| ||||| Sbjct: 890 ccccacgagttcttgacgatccagtaatctcctccg 855
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 243 ggccccacgagttcttggcgatccagta 270 ||||||||||||||||| |||||||||| Sbjct: 1052 ggccccacgagttcttgacgatccagta 1025
>ref|XM_346301.2| PREDICTED: Rattus norvegicus similar to ankyrin repeat and SOCS box-containing protein 9 (LOC367785), mRNA Length = 1137 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 365 ttctgcagcacggagccgctccc 387 ||||||||||||||||||||||| Sbjct: 524 ttctgcagcacggagccgctccc 546
>ref|XM_470991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 638 cagtccaccagctcttgcaccgacag 663 |||||||||||||||||| ||||||| Sbjct: 644 cagtccaccagctcttgctccgacag 619
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 actcttctccggcgccggtgac 291 |||||||||||||||||||||| Sbjct: 386541 actcttctccggcgccggtgac 386562
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 ggtaccggtgacatcatcgtccacac 60 ||||||||||||||||||| |||||| Sbjct: 196434 ggtaccggtgacatcatcggccacac 196459
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence Length = 219863 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 35 ggtaccggtgacatcatcgtccacac 60 ||||||||||||||||||| |||||| Sbjct: 69241 ggtaccggtgacatcatcggccacac 69266
>dbj|AK047578.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930093B02 product:similar to HECT DOMAIN AND RLD 2 [Homo sapiens], full insert sequence Length = 3368 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 35 ggtaccggtgacatcatcgtccacac 60 ||||||||||||||||||| |||||| Sbjct: 2386 ggtaccggtgacatcatcggccacac 2361
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 638 cagtccaccagctcttgcaccgacag 663 |||||||||||||||||| ||||||| Sbjct: 462385 cagtccaccagctcttgctccgacag 462410 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acatgacgggataagcaccg 163 |||||||||||||||||||| Sbjct: 18662759 acatgacgggataagcaccg 18662778 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 14184189 gccccacgagttcttgatgatccagtac 14184162 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 6667249 tcttctccggcgccggtgac 6667268
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ccgtacatggccatgccacacagccc 186 ||||||||||| |||||||||||||| Sbjct: 22154171 ccgtacatggcaatgccacacagccc 22154196 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ccccacgagttcttggcgatccagtact 272 |||||||||||||| |||||||||||| Sbjct: 22126325 ccccacgagttcttaacgatccagtact 22126352 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ccccacgagttcttggcgatccagtact 272 ||||||||||||||| ||||||||||| Sbjct: 22050555 ccccacgagttcttgatgatccagtact 22050582 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ccccacgagttcttggcgatccagtact 272 |||||||||||||| |||||||||||| Sbjct: 18948275 ccccacgagttcttcacgatccagtact 18948302
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 ccgtacatggccatgccacacagccc 186 ||||||||||| |||||||||||||| Sbjct: 75664 ccgtacatggcaatgccacacagccc 75689 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ccccacgagttcttggcgatccagtact 272 |||||||||||||| |||||||||||| Sbjct: 47818 ccccacgagttcttaacgatccagtact 47845
>dbj|AK110974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C02, full insert sequence Length = 1377 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 638 cagtccaccagctcttgcaccgacag 663 |||||||||||||||||| ||||||| Sbjct: 669 cagtccaccagctcttgctccgacag 644
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 638 cagtccaccagctcttgcaccgacag 663 |||||||||||||||||| ||||||| Sbjct: 101137 cagtccaccagctcttgctccgacag 101162
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 gagcacggccagcgccagcgc 435 ||||||||||||||||||||| Sbjct: 2787899 gagcacggccagcgccagcgc 2787919
>gb|DQ079995.1| Drosophila simulans male accessory gland protein (CG4847) mRNA, partial cds Length = 1086 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 246 cccacgagttcttggcgatccagta 270 |||||||||||||| |||||||||| Sbjct: 997 cccacgagttcttgacgatccagta 973
>ref|XM_757119.1| Ustilago maydis 521 hypothetical protein (UM06065.1) partial mRNA Length = 2055 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 gcgatccagtactcttctccg 280 ||||||||||||||||||||| Sbjct: 551 gcgatccagtactcttctccg 531
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 408098 gccggtgatcttgccgatgcg 408078
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 3398019 gccggtgatcttgccgatgcg 3397999
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 190291 gccggtgatcttgccgatgcg 190311
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 agcacggccagcgccagcgcg 436 ||||||||||||||||||||| Sbjct: 167286 agcacggccagcgccagcgcg 167306
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 agcacggccagcgccagcgcg 436 ||||||||||||||||||||| Sbjct: 79286 agcacggccagcgccagcgcg 79306
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 47926 gccggtgatcttgccgatgcg 47906
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 59662 gccggtgatcttgccgatgcg 59682
>emb|AJ428571.1|AEV428571 Azoarcus evansii partial padR gene, padA gene, padB gene, padC gene, padD gene, padE gene, padF gene, padG gene, padH gene, padI gene, padJ gene, ORFA, ORFB and ORFC Length = 16922 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 gccggtgatcttgccgatgcg 489 ||||||||||||||||||||| Sbjct: 12165 gccggtgatcttgccgatgcg 12145
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 27868939 gccccacgagttcctgacgatccagtact 27868911
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 gccagcgccagcgcgttctcg 442 ||||||||||||||||||||| Sbjct: 4247933 gccagcgccagcgcgttctcg 4247913
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 gagcacggccagcgccagcgc 435 ||||||||||||||||||||| Sbjct: 866198 gagcacggccagcgccagcgc 866178
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 421 ggccagcgccagcgcgttctcgttg 445 ||||||||||||||| ||||||||| Sbjct: 388858 ggccagcgccagcgccttctcgttg 388882
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 77017 gccccacgagttcctgacgatccagtact 76989
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ggccccacgagttcttggcgatccagtac 271 ||||||||||||||||| |||||||||| Sbjct: 733 ggccccacgagttcttgatgatccagtac 705
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ggccccacgagttcttggcgatccagtac 271 ||||||||||||||||| |||||||||| Sbjct: 1489 ggccccacgagttcttgatgatccagtac 1461
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 955 gccccacgagttcctgacgatccagtact 927
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtact 272 ||||||||||||| || |||||||||||| Sbjct: 1041 gccccacgagttcctgacgatccagtact 1013
>ref|XM_528595.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 13J1 (LOC473225), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tctgcagcacggagccgctc 385 |||||||||||||||||||| Sbjct: 68 tctgcagcacggagccgctc 87
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 1023 gccccacgagttcttgatgatccagtac 996
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 44232 tcttctccggcgccggtgac 44251
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cggtgaccccgtagccgacc 304 |||||||||||||||||||| Sbjct: 1075 cggtgaccccgtagccgacc 1056
>gb|BT017224.1| Zea mays clone EL01N0302C04.c mRNA sequence Length = 617 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cggtgaccccgtagccgacc 304 |||||||||||||||||||| Sbjct: 187 cggtgaccccgtagccgacc 168
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 agccgctcccgtcgatctggacgg 401 ||||||||| |||||||||||||| Sbjct: 9277 agccgctccggtcgatctggacgg 9254
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 agccgctcccgtcgatctggacgg 401 ||||||||| |||||||||||||| Sbjct: 109965 agccgctccggtcgatctggacgg 109942
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 15822 tcttctccggcgccggtgac 15803
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 52620 tcttctccggcgccggtgac 52601
>gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosome 19, complete sequence Length = 190038 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tgatgcatcttattttaata 103 |||||||||||||||||||| Sbjct: 58266 tgatgcatcttattttaata 58285
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 23357720 tcttctccggcgccggtgac 23357739
>ref|XM_848249.1| PREDICTED: Canis familiaris similar to TSPY-like 5 (LOC610706), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tgagcacggccagcgccagc 433 |||||||||||||||||||| Sbjct: 948 tgagcacggccagcgccagc 929
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 acgccggtgatcttgccgat 486 |||||||||||||||||||| Sbjct: 272680 acgccggtgatcttgccgat 272699
>gb|AC112272.4| Mus musculus BAC clone RP24-121N15 from 19, complete sequence Length = 155861 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tgatgcatcttattttaata 103 |||||||||||||||||||| Sbjct: 79750 tgatgcatcttattttaata 79769
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ggccccacgagttcttggcgatccagta 270 |||||||||||||||| |||||||||| Sbjct: 820 ggccccacgagttcttcacgatccagta 793
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 2163 gccccacgagttcttcacgatccagtac 2136
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 21955 gccccacgagttcttgatgatccagtac 21928
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 88205 tcttctccggcgccggtgac 88224
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acatgacgggataagcaccg 163 |||||||||||||||||||| Sbjct: 130625 acatgacgggataagcaccg 130644
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 1026 gccccacgagttcttcacgatccagtac 999
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 562 gccccacgagttcttcacgatccagtac 535
>emb|CR857593.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1115 (from clone DKFZp469H1115) Length = 4699 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 agcacggccagcgccagcgc 435 |||||||||||||||||||| Sbjct: 139 agcacggccagcgccagcgc 158
>dbj|AK125157.1| Homo sapiens cDNA FLJ43167 fis, clone FCBBF3004041 Length = 2595 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 agcacggccagcgccagcgc 435 |||||||||||||||||||| Sbjct: 171 agcacggccagcgccagcgc 190
>gb|AC079177.21| Homo sapiens Xp BAC RP11-147B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155533 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gcatcttattttaatagcacatta 111 |||| ||||||||||||||||||| Sbjct: 51108 gcattttattttaatagcacatta 51085
>gb|AC109592.3| Homo sapiens BAC clone RP11-750O22 from 4, complete sequence Length = 86314 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 attgatgcatcttattttaa 101 |||||||||||||||||||| Sbjct: 41944 attgatgcatcttattttaa 41963
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 ccagctcttgcaccgacagg 664 |||||||||||||||||||| Sbjct: 2398608 ccagctcttgcaccgacagg 2398627
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 933 gccccacgagttcttcacgatccagtac 906
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 936 gccccacgagttcttcacgatccagtac 909
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 984 gccccacgagttcttcacgatccagtac 957
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 1102 gccccacgagttcttcacgatccagtac 1075
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 27756 gccccacgagttcttcacgatccagtac 27729
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 1291 gccccacgagttcttcacgatccagtac 1264
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 2183391 tcttctccggcgccggtgac 2183372
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 23350748 tcttctccggcgccggtgac 23350767
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 30064165 tcttctccggcgccggtgac 30064146
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 acatgacgggataagcaccg 163 |||||||||||||||||||| Sbjct: 11897 acatgacgggataagcaccg 11916
>gb|AC016526.6|AC016526 Homo sapiens chromosome 14 clone RP11-361H10 map 14q24.3, complete sequence Length = 179984 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cgtgcacatgcattgatgca 90 |||||||||||||||||||| Sbjct: 154171 cgtgcacatgcattgatgca 154152
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 40376 tcttctccggcgccggtgac 40395
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 agcacggccagcgccagcgc 435 |||||||||||||||||||| Sbjct: 79442 agcacggccagcgccagcgc 79461
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tcttctccggcgccggtgac 291 |||||||||||||||||||| Sbjct: 43762 tcttctccggcgccggtgac 43743
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ccccacgagttcttggcgatccagtact 272 ||||||||||||||| ||||||||||| Sbjct: 92619 ccccacgagttcttgatgatccagtact 92646
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 1591 gccccacgagttcttgatgatccagtac 1564
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 ccccacgagttcttggcgatccagtact 272 ||||||||||||||| ||||||||||| Sbjct: 602 ccccacgagttcttgatgatccagtact 575
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 ccccacgagttcttggcgatccagtact 272 |||||||||||||| |||||||||||| Sbjct: 1000 ccccacgagttcttcacgatccagtact 973
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 245 ccccacgagttcttggcgatccagtact 272 |||||||||||||| |||||||||||| Sbjct: 1009 ccccacgagttcttcacgatccagtact 982
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cggtgaccccgtagccgacc 304 |||||||||||||||||||| Sbjct: 371 cggtgaccccgtagccgacc 390
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence Length = 794 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 637 gcagtccaccagctcttgcaccgacagg 664 ||||||||||||||| ||| |||||||| Sbjct: 152 gcagtccaccagctcctgctccgacagg 125
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 acgagttcttggcgatccagtact 272 ||||||||||| |||||||||||| Sbjct: 1035 acgagttcttgacgatccagtact 1012 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 637 gcagtccaccagctcttgcaccgacagg 664 ||||||||||||||| ||| |||||||| Sbjct: 626 gcagtccaccagctcctgctccgacagg 599
>gb|AY104208.1| Zea mays PCO086864 mRNA sequence Length = 941 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gagcacggccagcgccagcg 434 |||||||||||||||||||| Sbjct: 224 gagcacggccagcgccagcg 205
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 accatgatataatactaactacat 147 ||||| |||||||||||||||||| Sbjct: 96723 accataatataatactaactacat 96700
>gb|AY944523.1| Unidentified soil organism clone XIX-33 from Australia environmental-sample Length = 696 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 613 cggcgagctgaacacacccgtgctgcag 640 ||||||||||| |||||| ||||||||| Sbjct: 113 cggcgagctgatcacaccggtgctgcag 86
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 ||||||||||||||| ||||||||||| Sbjct: 1136 gccccacgagttcttcacgatccagtac 1109
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 244 gccccacgagttcttggcgatccagtac 271 |||||||||||||||| |||||||||| Sbjct: 138 gccccacgagttcttgatgatccagtac 111 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,183,914 Number of Sequences: 3902068 Number of extensions: 4183914 Number of successful extensions: 80455 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78679 Number of HSP's gapped (non-prelim): 1774 length of query: 664 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 641 effective length of database: 17,143,297,704 effective search space: 10988853828264 effective search space used: 10988853828264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
