>ICAM1_RAT (Q00238) Intercellular adhesion molecule 1 precursor (ICAM-1)|
          Length = 545

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 14  PPXCEPLSSTNHQDTSNKRFFLVAI---IPYKNLFXEEVVHSSLLWGKPHSPVSSCFGSF 184
           PP  +   + N     +KR F  +    +  K+LF  + +   +L+G PH     C G++
Sbjct: 360 PPTSQIQFTLNASPEDHKRRFFCSAALEVDGKSLFKNQTLELHVLYG-PHLDKKDCLGNW 418

Query: 185 TW 190
           TW
Sbjct: 419 TW 420

>VE1_HPV25 (Q02049) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 604

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 192 HQVNEPKHEDTGECGLPQRREECTTSSXNKFL 97
           HQ++    ED GE G  QR  +C+T S N+ L
Sbjct: 573 HQLDLSDQEDEGENGESQRAFQCSTRSANEHL 604

>GLMU_PROMA (Q7VBP2) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 452

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 28  AAKLNQPSGYIQ*KVFFSCHNSIQKFILGRGCTLFSSLGQTT 153
           +A+L+ PSGY   +VF + H  I+K I  R CT   +    T
Sbjct: 130 SARLSNPSGYG--RVFSNEHGHIEKIIEDRDCTKLEAKNNLT 169

>CNTP1_MOUSE (O54991) Contactin-associated protein 1 precursor (Caspr) (Caspr1)|
            (Neurexin 4) (Neurexin IV) (Paranodin) (NCP1) (MHDNIV)
          Length = 1385

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
 Frame = -1

Query: 182  MSQSMKIQGSV------VCPREEKSVQPLPRINFCMELWQLKKTFYWMYPDGWLSLAAHX 21
            ++++M++QG +        PR    VQP       ++ W L   F + + DGW+++    
Sbjct: 1236 LAEAMRVQGELSESNCGAMPRLVSEVQPE------LDPWYLPPDFPYYHDDGWIAILLGF 1289

Query: 20   LV 15
            LV
Sbjct: 1290 LV 1291

>VE1_HPV19 (Q02048) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 604

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 189 QVNEPKHEDTGECGLPQRREECTTSSXNKFL 97
           Q+    HE+ GE G  QR  +C+T S N+ L
Sbjct: 574 QLELSDHEEEGENGESQRTFQCSTRSANEHL 604


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,614,395
Number of Sequences: 219361
Number of extensions: 523725
Number of successful extensions: 1575
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)