>gb|M36650.1|BLYGAPDH Barley glyceraldehyde-3-phosphate dehydrogenase mRNA, 3' end
          Length = 1141

 Score =  329 bits (166), Expect = 2e-87
 Identities = 202/215 (93%), Gaps = 2/215 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    caagtacataataccaccaanatgtgagccgctaagctcaaccaaccatcaggatacatc 60
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 1098 caagtacataataccaccaaaatgtgagccgctaagctcaaccaaccatcaggat-catc 1040

                                                                        
Query: 61   caataaaaggnnnnnnnnagttgccataattccatacaaaaatttattctnggaagaggt 120
            ||||||||||        |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1039 caataaaaggttttttttagttgccataattccatacaaaaatttattctcggaagaggt 980

                                                                        
Query: 121  tgtacactcttctcttctctggggcaaaccacactcccctgtatcttcatgctttggctc 180
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 979  tgtacactcttctcttctctggggcaaaccacact-ccctgtatcttcatgctttggctc 921

                                               
Query: 181  atttacttggtgctgtgcntgtggcggatgaggtc 215
            |||||||||||||||||| ||||||||||||||||
Sbjct: 920  atttacttggtgctgtgcatgtggcggatgaggtc 886

>gb|AF251217.1|AF251217 Triticum aestivum cytosolic glyceraldehyde-3-phosphate
           dehydrogenase GAPDH mRNA, partial cds
          Length = 717

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 178 ctcatttacttggtgctgtgcntgtggcggatgaggtc 215
           ||||||||||||||||||||| |||| |||||||||||
Sbjct: 714 ctcatttacttggtgctgtgcatgtgacggatgaggtc 677

>gb|BT016360.1| Zea mays clone Contig193 mRNA sequence
          Length = 1293

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 179  tcatttacttggtgctgtgcntgtggcggatgaggtc 215
            |||||||||||||||||| | |||||||||| |||||
Sbjct: 1079 tcatttacttggtgctgttcatgtggcggatcaggtc 1043

>gb|AY319478.1| Triticum aestivum cytosolic glyceraldehyde-3-phosphate dehydrogenase
            gene, partial cds
          Length = 1042

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 183  ttacttggtgctgtgcntgtggcggatgaggtc 215
            |||||||||||||||| |||| |||||||||||
Sbjct: 1040 ttacttggtgctgtgcatgtgacggatgaggtc 1008

>gb|L13431.1|MZEGAPDA Zea mays glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds
          Length = 899

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 179 tcatttacttggtgctgtgcntgtggcggatgaggtc 215
           |||||||||||||||||| | |||||||||| |||||
Sbjct: 710 tcatttacttggtgctgttcatgtggcggatcaggtc 674

>gb|U45856.1|ZMU45856 Zea mays glyceraldehyde-3-phosphate dehydrogenase GAPC3 (gpc3) mRNA,
            complete cds
          Length = 1281

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 179  tcatttacttggtgctgtgcntgtggcggatgaggtc 215
            |||||||||||||||||| | |||||||||| |||||
Sbjct: 1091 tcatttacttggtgctgttcatgtggcggatcaggtc 1055

>ref|XM_506852.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1791_B03.34 mRNA
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 132  ctcttctctggggcaaaccac-actcccctgtatct 166
            ||||||||||||||||| ||| ||||||||||||||
Sbjct: 1293 ctcttctctggggcaaaacacaactcccctgtatct 1258

>ref|XM_466582.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1456

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 132  ctcttctctggggcaaaccac-actcccctgtatct 166
            ||||||||||||||||| ||| ||||||||||||||
Sbjct: 1309 ctcttctctggggcaaaacacaactcccctgtatct 1274

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                    
Query: 132      ctcttctctggggcaaaccac-actcccctgtatct 166
                ||||||||||||||||| ||| ||||||||||||||
Sbjct: 23549705 ctcttctctggggcaaaacacaactcccctgtatct 23549670

>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                  
Query: 132    ctcttctctggggcaaaccac-actcccctgtatct 166
              ||||||||||||||||| ||| ||||||||||||||
Sbjct: 115388 ctcttctctggggcaaaacacaactcccctgtatct 115353

>dbj|AK099086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G10, full
            insert sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 132  ctcttctctggggcaaaccac-actcccctgtatct 166
            ||||||||||||||||| ||| ||||||||||||||
Sbjct: 1293 ctcttctctggggcaaaacacaactcccctgtatct 1258

>dbj|AK062215.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A09, full
            insert sequence
          Length = 1455

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                
Query: 132  ctcttctctggggcaaaccac-actcccctgtatct 166
            ||||||||||||||||| ||| ||||||||||||||
Sbjct: 1308 ctcttctctggggcaaaacacaactcccctgtatct 1273

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 127      ctcttctcttctctggggcaa 147
                |||||||||||||||||||||
Sbjct: 28719022 ctcttctcttctctggggcaa 28719042

>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431H09
          Length = 166886

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    ctcttctcttctctggggcaa 147
              |||||||||||||||||||||
Sbjct: 102096 ctcttctcttctctggggcaa 102116

>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ataattccatacaaaaattt 105
              ||||||||||||||||||||
Sbjct: 114326 ataattccatacaaaaattt 114307

>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete sequence
          Length = 177697

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    acactcttctcttctctggg 143
              ||||||||||||||||||||
Sbjct: 111397 acactcttctcttctctggg 111378

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     cataattccatacaaaaatt 104
              ||||||||||||||||||||
Sbjct: 151831 cataattccatacaaaaatt 151850

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       cataattccatacaaaaatt 104
                ||||||||||||||||||||
Sbjct: 30884310 cataattccatacaaaaatt 30884329

>gb|AC016735.10| Homo sapiens BAC clone RP11-391M15 from 2, complete sequence
          Length = 182730

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    cacactcccctgtatcttca 169
              ||||||||||||||||||||
Sbjct: 106231 cacactcccctgtatcttca 106212

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cataattccatacaaaaatt 104
             ||||||||||||||||||||
Sbjct: 60884 cataattccatacaaaaatt 60903

>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete
              sequence
          Length = 307443

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ataattccatacaaaaattt 105
              ||||||||||||||||||||
Sbjct: 248319 ataattccatacaaaaattt 248338

>emb|BX284664.8| Zebrafish DNA sequence from clone DKEY-7I23 in linkage group 8,
             complete sequence
          Length = 228202

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    aattccatacaaaaatttat 107
             ||||||||||||||||||||
Sbjct: 28677 aattccatacaaaaatttat 28658


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,308,298
Number of Sequences: 3902068
Number of extensions: 2308298
Number of successful extensions: 215371
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 215178
Number of HSP's gapped (non-prelim): 197
length of query: 215
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 193
effective length of database: 17,147,199,772
effective search space: 3309409555996
effective search space used: 3309409555996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)