Clone Name | rbasd18p03 |
---|---|
Clone Library Name | barley_pub |
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 825 bits (416), Expect = 0.0 Identities = 432/436 (99%), Gaps = 1/436 (0%) Strand = Plus / Minus Query: 1 taacatttt-atgttgtatacacagatggcaacaatgctttctcatggaactcaaggcgc 59 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 78877 taacattttcatgttgtatacacagatggcaacaatgctttctcatggaactccaggcgc 78818 Query: 60 atgttcagttcaaatgagaaacatctgcctccaatatctgacccgaaaattgagactgca 119 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 78817 atgttcagttcaaatgagaaacatctgcctccaatatctgacccggaaattgagactgca 78758 Query: 120 tttaaggatttgatggctgccagctggaatgagcttccgggttctcttgttgaggaagca 179 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 78757 tttaaggatttgatggctgccagctggaatgagcttccgggttctctcgttgaggaagca 78698 Query: 180 aagaaagaagtatctaaagctactgatgataaggctggtcaagaagctttggaaaatgta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78697 aagaaagaagtatctaaagctactgatgataaggctggtcaagaagctttggaaaatgta 78638 Query: 240 tttcgtgcagctgaagcatgtgaagaatttagtggagttttagttaccctaagaatggct 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78637 tttcgtgcagctgaagcatgtgaagaatttagtggagttttagttaccctaagaatggct 78578 Query: 300 cttgatgatctttgtggtctaaccggtgaggtcagtacttaatcacctttcttcccttgt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78577 cttgatgatctttgtggtctaaccggtgaggtcagtacttaatcacctttcttcccttgt 78518 Query: 360 ttatgtattgctctttgcagagttatggttcatttttctgcttctgcatatatgtcttac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78517 ttatgtattgctctttgcagagttatggttcatttttctgcttctgcatatatgtcttac 78458 Query: 420 caaccctggctcattt 435 |||||||||||||||| Sbjct: 78457 caaccctggctcattt 78442 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 389 tcatttttctgcttctgcatatatgtcttaccaaccct 426 |||||||||| ||||||| ||||||||||||||||||| Sbjct: 78447 tcatttttctccttctgcttatatgtcttaccaaccct 78410
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 563 bits (284), Expect = e-157 Identities = 345/364 (94%), Gaps = 1/364 (0%) Strand = Plus / Minus Query: 1 taacatttt-atgttgtatacacagatggcaacaatgctttctcatggaactcaaggcgc 59 ||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 79848 taacattttcatattgtatactcagatggcaacaatgctttctcatggaactccaggcgc 79789 Query: 60 atgttcagttcaaatgagaaacatctgcctccaatatctgacccgaaaattgagactgca 119 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79788 atgttcagttcaaatgagaaacatctgcctgcaatatctgacccgaaaattgagactgca 79729 Query: 120 tttaaggatttgatggctgccagctggaatgagcttccgggttctcttgttgaggaagca 179 |||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 79728 tttaaggatttgatggctgctagctggaacgagcttccaggttctcttgtggaggaagca 79669 Query: 180 aagaaagaagtatctaaagctactgatgataaggctggtcaagaagctttggaaaatgta 239 ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 79668 aagaaagcagtatctatggctactgatgataaggctggtcaagaagccttggaaaatgta 79609 Query: 240 tttcgtgcagctgaagcatgtgaagaatttagtggagttttagttaccctaagaatggct 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 79608 tttcgtgcagctgaagcatgtgaagagtttagtggagttttagttaccctaagaatggct 79549 Query: 300 cttgatgatctttgtggtctaaccggtgaggtcagtacttaatcacctttcttcccttgt 359 |||||||||||||||||||| || || ||||||||||||||||||||| |||||| |||| Sbjct: 79548 cttgatgatctttgtggtcttacgggcgaggtcagtacttaatcacctctcttccattgt 79489 Query: 360 ttat 363 |||| Sbjct: 79488 ttat 79485
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 278 bits (140), Expect = 1e-71 Identities = 275/320 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 98090 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 98149 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 98150 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 98209 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 98210 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 98269 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 98270 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 98329 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 98330 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 98389 Query: 326 tgaggtcagtacttaatcac 345 |||||||||||| ||||||| Sbjct: 98390 tgaggtcagtacctaatcac 98409
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 278 bits (140), Expect = 1e-71 Identities = 275/320 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 20663656 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 20663715 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 20663716 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 20663775 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 20663776 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 20663835 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 20663836 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 20663895 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 20663896 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 20663955 Query: 326 tgaggtcagtacttaatcac 345 |||||||||||| ||||||| Sbjct: 20663956 tgaggtcagtacctaatcac 20663975
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 278 bits (140), Expect = 1e-71 Identities = 275/320 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 9807 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 9866 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 9867 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 9926 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 9927 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 9986 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 9987 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 10046 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 10047 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 10106 Query: 326 tgaggtcagtacttaatcac 345 |||||||||||| ||||||| Sbjct: 10107 tgaggtcagtacctaatcac 10126
>ref|XM_472441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 150 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 209 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 210 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 269 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 270 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 329 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 330 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 389 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 390 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 449 Query: 326 tgag 329 |||| Sbjct: 450 tgag 453
>dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F05, full insert sequence Length = 970 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 214 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 273 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 274 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 333 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 334 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 393 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 394 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 453 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 454 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 513 Query: 326 tgag 329 |||| Sbjct: 514 tgag 517
>dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A04, full insert sequence Length = 1116 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 333 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 392 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 393 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 452 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 453 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 512 Query: 326 tgag 329 |||| Sbjct: 513 tgag 516
>dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I07, full insert sequence Length = 1007 Score = 254 bits (128), Expect = 2e-64 Identities = 260/304 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 199 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 258 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 259 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 318 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 319 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 378 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 379 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 438 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 439 atttggtggagttctagtcaccctaagaatggctctagatgatctttgtggtataactgg 498 Query: 326 tgag 329 |||| Sbjct: 499 tgag 502
>dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H01, full insert sequence Length = 1111 Score = 246 bits (124), Expect = 5e-62 Identities = 259/304 (85%) Strand = Plus / Plus Query: 26 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 85 |||||||||||| || |||||||||| |||||| ||||||| |||||||| || ||||| Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272 Query: 86 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 145 ||| | ||||||||||| || |||| |||| |||||||||||||||||||| ||||| Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332 Query: 146 gaatgagcttccgggttctcttgttgaggaagcaaagaaagaagtatctaaagctactga 205 || || ||||| | ||||||||| ||||||||||||| | ||| |||||||| || Sbjct: 333 gactggacttccagattctcttgtaattgaagcaaagaaagctgcatccaaagctacgga 392 Query: 206 tgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagcatgtgaaga 265 |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 393 tgataaggctgggaaagaggctttgctaaatgtatttcgtgcagctgaggcatgtgaaga 452 Query: 266 atttagtggagttttagttaccctaagaatggctcttgatgatctttgtggtctaaccgg 325 |||| |||||||| |||| |||||||||| |||||| ||||||||||||||| |||| || Sbjct: 453 atttggtggagttctagtcaccctaagaagggctctagatgatctttgtggtataactgg 512 Query: 326 tgag 329 |||| Sbjct: 513 tgag 516
>gb|AY105615.1| Zea mays PCO070046 mRNA sequence Length = 1106 Score = 214 bits (108), Expect = 2e-52 Identities = 216/252 (85%) Strand = Plus / Plus Query: 65 cagttcaaatgagaaacatctgcctccaatatctgacccgaaaattgagactgcatttaa 124 |||||||||||| ||||| |||| |||||||||| || |||| || |||||||||| Sbjct: 267 cagttcaaatgaaaaacacttgcccgcaatatctgatccagaaatagaatctgcatttaa 326 Query: 125 ggatttgatggctgccagctggaatgagcttccgggttctcttgttgaggaagcaaagaa 184 ||||||| ||||||| || |||||||| ||||| | ||||||||| | |||||||||||| Sbjct: 327 ggatttgttggctgctagttggaatgaacttccagattctcttgtagcggaagcaaagaa 386 Query: 185 agaagtatctaaagctactgatgataaggctggtcaagaagctttggaaaatgtatttcg 244 || || ||||||||| || ||||||| ||||||||||| |||||| ||||||||||| | Sbjct: 387 agcagcatctaaagccaccgatgatagtgctggtcaagaggctttgaaaaatgtattttg 446 Query: 245 tgcagctgaagcatgtgaagaatttagtggagttttagttaccctaagaatggctcttga 304 ||||||||| ||||||||||| || |||||| || ||||||||||||||||||||||| Sbjct: 447 tgcagctgaggcatgtgaagatttcagtggaaccttggttaccctaagaatggctcttga 506 Query: 305 tgatctttgtgg 316 |||||| ||||| Sbjct: 507 tgatctgtgtgg 518
>emb|BX816964.1|CNS0ADA8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| |||||||||| || ||||||||||| Sbjct: 437 gatgacaaggcagggcaagaggctttgaaaaatgtattccgagcagctgaagc 489
>gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence Length = 1056 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 120 tttaaggatttgatggctgccagctggaatgagct 154 |||||||| ||||||||||| |||||| ||||||| Sbjct: 374 tttaaggacttgatggctgcaagctgggatgagct 408
>gb|AC144502.5| Medicago truncatula clone mth2-5p10, complete sequence Length = 91507 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 381 gttatggttcatttttctgctt 402 |||||||||||||||||||||| Sbjct: 55595 gttatggttcatttttctgctt 55574
>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence Length = 117770 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 catttttctgcttctgcatata 411 |||||||||||||||||||||| Sbjct: 74479 catttttctgcttctgcatata 74458
>ref|NM_103636.1| Arabidopsis thaliana unknown protein AT1G47420 mRNA, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 483 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 535
>gb|AC146539.2| Gasterosteus aculeatus clone CH213-129C17, complete sequence Length = 202686 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tgttgtatacacagatggcaacaat 35 ||||||| ||||||||||||||||| Sbjct: 57706 tgttgtacacacagatggcaacaat 57730
>gb|AC146690.1| Gasterosteus aculeatus clone CH213-156J22, complete sequence Length = 166930 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tgttgtatacacagatggcaacaat 35 ||||||| ||||||||||||||||| Sbjct: 28381 tgttgtacacacagatggcaacaat 28405
>gb|BT000345.1| Arabidopsis thaliana Unknown protein (At1g47420) mRNA, complete cds Length = 819 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 406 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 458
>gb|AF344326.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 406 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 458
>gb|AY062990.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 805 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 406 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 458
>gb|AY034947.1| Arabidopsis thaliana unknown protein (At1g47420) mRNA, complete cds Length = 1088 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 455 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 507
>gb|AC114277.2| Homo sapiens chromosome 5 clone CTD-2009F3, complete sequence Length = 100496 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 ggttcatttttctgcttctgcatat 410 |||||||||||||||||||| |||| Sbjct: 57753 ggttcatttttctgcttctggatat 57729
>gb|AC026439.4| Homo sapiens chromosome 5 clone CTD-2267H19, complete sequence Length = 105081 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggttcatttttctgcttctgcatat 410 |||||||||||||||||||| |||| Sbjct: 70569 ggttcatttttctgcttctggatat 70593
>gb|AY054563.1| Arabidopsis thaliana Unknown protein (At1g47420; F16N3.26) mRNA, complete cds Length = 988 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 427 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 479
>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180869 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 agttcaaatgagaaacatctg 86 ||||||||||||||||||||| Sbjct: 837 agttcaaatgagaaacatctg 857
>emb|BX815950.1|CNS0AD19 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH19ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 153 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 205
>emb|BX816430.1|CNS0AAP4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH48ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 999 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 456 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 508
>gb|AY084381.1| Arabidopsis thaliana clone 10618 mRNA, complete sequence Length = 1107 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 483 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 535
>gb|AC015449.3|AC015449 Arabidopsis thaliana chromosome I BAC T3F24 genomic sequence, complete sequence Length = 77424 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 10600 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 10652
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 204 gatgataaggctggtcaagaagctttggaaaatgtatttcgtgcagctgaagc 256 ||||| ||||| || ||||| |||||| ||||||| || || ||||||||||| Sbjct: 169728 gatgacaaggcagggcaagaggctttgaaaaatgtgttccgagcagctgaagc 169780
>emb|AL138996.4|CNS01DX1 Human chromosome 14 DNA sequence BAC R-902B17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184260 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gaagcaaagaaagaagtatct 194 ||||||||||||||||||||| Sbjct: 142978 gaagcaaagaaagaagtatct 142998
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agttcaaatgagaaacatctg 86 ||||||||||||||||||||| Sbjct: 37299 agttcaaatgagaaacatctg 37279
>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete sequence Length = 189104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 atgttcagttcaaatgagaaa 80 ||||||||||||||||||||| Sbjct: 53759 atgttcagttcaaatgagaaa 53779
>gb|AY632359.1| Gossypium hirsutum BAC 155C17, complete sequence Length = 103930 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 catttttctgcttctgcata 409 |||||||||||||||||||| Sbjct: 65975 catttttctgcttctgcata 65994
>ref|NM_022166.2| Homo sapiens xylosyltransferase I (XYLT1), mRNA Length = 4178 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tggttcatttttctgcttct 404 |||||||||||||||||||| Sbjct: 3539 tggttcatttttctgcttct 3558
>gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, complete sequence Length = 207515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 aggaagcaaagaaagaagta 191 |||||||||||||||||||| Sbjct: 181529 aggaagcaaagaaagaagta 181510
>emb|CR786566.25| Zebrafish DNA sequence from clone DKEYP-2E4 in linkage group 13, complete sequence Length = 131584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 131307 acttaatcacctttcttccc 131288
>gb|AC100149.12| Mus musculus chromosome 10, clone RP23-43F3, complete sequence Length = 184927 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gaggaagcaaagaaagaagtatct 194 ||||||||||||||||||| |||| Sbjct: 66658 gaggaagcaaagaaagaagaatct 66635
>gb|AC097647.2| Homo sapiens cosmid clone XXcos-2185C16 from 7, complete sequence Length = 45470 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 5118 agaatggctcttgatgatct 5137
>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five novel genes, two novel pseudogenes and the gene for a novel protein similar to the olfactory receptor family, complete sequence Length = 153649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 31908 agaatggctcttgatgatct 31889
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains thirteen novel genes, a novel pseudogene, a novel gene similar to the F-box only protein 25 gene(FBXO25), a novel pseudogene similar to the beta-tubulin family and a CpG island, complete sequence Length = 179567 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 7150 agaatggctcttgatgatct 7169
>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a pseudogene similar to part of DEAD/H box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two novel pseudogenes, nine novel genes, two novel proteins similar to the olfactory receptor family, a capicua homolog (Drosophila) (CIC) pseudogene and two CpG islands, complete sequence Length = 166904 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 103189 agaatggctcttgatgatct 103208
>emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on chromosome 1 Contains four novel genes, the 5' end of a novel gene and the 3' end of the gene for KARP-1-binding protein (KAB), complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 46382 agaatggctcttgatgatct 46401
>emb|AL450339.5| Human DNA sequence from clone RP11-25C17 on chromosome 6 Contains part of a novel gene (contains FLJ31738 and KIAA1209), complete sequence Length = 63892 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ggttcatttttctgcttctg 405 |||||||||||||||||||| Sbjct: 18860 ggttcatttttctgcttctg 18841
>emb|AL353654.29| Human DNA sequence from clone RP1-24O22 on chromosome 6 Contains an olfactory receptor pseudogene, a gene for a novel protein similar to septin and a novel pseudogene, complete sequence Length = 86701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 64886 agaatggctcttgatgatct 64905
>emb|AL137028.9| Human DNA sequence from clone RP11-476I15 on chromosome 20 Contains the 3' end of the C20orf36 gene, a capicua homolog (Drosophila) (CIC) pseudogene, the C20orf69 gene and two CpG islands, complete sequence Length = 59425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 35627 agaatggctcttgatgatct 35608
>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the 3' end of a gene for a novel protein similar to 17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the gene for a novel protein similar to CDC10 cell division cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a novel gene containing FLJ14186, a capicua homolog (Drosophila) (CIC) pseudogene and a CpG island, complete sequence Length = 166835 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 110096 agaatggctcttgatgatct 110077
>gb|AC124157.4| Equus caballus clone CH241-37P10, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ttccgggttctcttgttgaggaag 177 |||| ||||||||||||||||||| Sbjct: 110971 ttccaggttctcttgttgaggaag 110994
>emb|AL031259.1|HS191N21 Human DNA sequence from clone RP1-191N21 on chromosome 6q27 Contains a 7 transmembrane receptor (rhodopsin family) (olfactory receptor like) pseudogene, the PDCD2 gene for programmed cell death 2 (RP8 homolog), the TBP gene for TATA box binding protein, the PSMB1 gene for proteasome subunit HC5 and two CpG islands, complete sequence Length = 113820 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 27386 agaatggctcttgatgatct 27405
>gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, complete sequence Length = 105166 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 gaaaattgagactgcatttaaggatttg 131 ||||||||||| || ||||||||||||| Sbjct: 44615 gaaaattgagagtgaatttaaggatttg 44588
>emb|BX927279.15| Zebrafish DNA sequence from clone CH211-101N16 in linkage group 13, complete sequence Length = 182020 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 20765 acttaatcacctttcttccc 20746
>emb|BX530081.6| Zebrafish DNA sequence from clone CH211-121B13 in linkage group 14, complete sequence Length = 162058 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttaatcacctttcttccctt 357 |||||||||||||||||||| Sbjct: 30472 ttaatcacctttcttccctt 30491
>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence Length = 116326 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 109876 acttaatcacctttcttccc 109857
>gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 73315 agaatggctcttgatgatct 73296
>gb|AC182391.3| Pan troglodytes BAC clone CH251-510H16 from chromosome 1, complete sequence Length = 188995 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 83739 agaatggctcttgatgatct 83758
>gb|AC099785.2| Homo sapiens chromosome 1 clone RP11-435I3, complete sequence Length = 186160 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tgctctttgcagagttatgg 387 |||||||||||||||||||| Sbjct: 84937 tgctctttgcagagttatgg 84956
>gb|AC096542.2| Homo sapiens chromosome 1 clone RP11-332L18, complete sequence Length = 189411 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 182189 agaatggctcttgatgatct 182208
>gb|AC092299.5| Homo sapiens chromosome 19 clone LLNLF-173C4, complete sequence Length = 39524 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 8768 agaatggctcttgatgatct 8787
>gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosome 9, complete sequence Length = 160241 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agcaaagaaagaagtatcta 195 |||||||||||||||||||| Sbjct: 14456 agcaaagaaagaagtatcta 14475
>emb|BX649242.6| Zebrafish DNA sequence from clone DKEY-264C3 in linkage group 17, complete sequence Length = 147772 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 147102 acttaatcacctttcttccc 147121
>gb|AC160246.2| Mus musculus BAC clone RP24-465F1 from chromosome 9, complete sequence Length = 157105 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agcaaagaaagaagtatcta 195 |||||||||||||||||||| Sbjct: 146373 agcaaagaaagaagtatcta 146392
>gb|AC157652.3| Mus musculus BAC clone RP24-324J2 from chromosome 10, complete sequence Length = 191096 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gtacttaatcacctttcttc 353 |||||||||||||||||||| Sbjct: 65772 gtacttaatcacctttcttc 65753
>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence Length = 147599 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ttgaggaagcaaagaaagaa 188 |||||||||||||||||||| Sbjct: 58602 ttgaggaagcaaagaaagaa 58583
>gb|AC115287.5| Homo sapiens chromosome 1 clone RP5-870L9, complete sequence Length = 99182 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 5385 agaatggctcttgatgatct 5404
>gb|AC092192.1|AC092192 Homo sapiens chromosome 19 clone LLNLF-127D1, complete sequence Length = 39041 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 36081 agaatggctcttgatgatct 36100
>emb|BX571720.6| Zebrafish DNA sequence from clone DKEY-77G5 in linkage group 17, complete sequence Length = 227706 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 1330 acttaatcacctttcttccc 1349
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence Length = 199487 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 153550 agaatggctcttgatgatct 153531
>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence Length = 189557 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 108250 agaatggctcttgatgatct 108231
>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence Length = 209278 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 aggaagcaaagaaagaagta 191 |||||||||||||||||||| Sbjct: 819 aggaagcaaagaaagaagta 800
>gb|AC148307.3| Pan troglodytes BAC clone RP43-44G20 from chromosome 11, complete sequence Length = 199161 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 188484 agaatggctcttgatgatct 188465
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 32363 agaatggctcttgatgatct 32382
>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence Length = 150642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 91713 agaatggctcttgatgatct 91732
>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence Length = 177769 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 32318 agaatggctcttgatgatct 32337
>gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1, complete sequence Length = 137304 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 69144 agaatggctcttgatgatct 69125
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 3554669 agaatggctcttgatgatct 3554688 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 2493701 agaatggctcttgatgatct 2493682
>gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 88326 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 104 gaaaattgagactgcatttaaggatttg 131 ||||||||||| || ||||||||||||| Sbjct: 64313 gaaaattgagagtgaatttaaggatttg 64340
>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence Length = 120139 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 31893 agaatggctcttgatgatct 31874
>gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, complete sequence Length = 152802 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 99135 agaatggctcttgatgatct 99116
>gb|AC138030.1| Homo sapiens chromosome 5 clone XXcos-B22C100, complete sequence Length = 44419 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 21047 agaatggctcttgatgatct 21028
>gb|AC137933.1| Homo sapiens chromosome 16 clone XXcos-yA11c11, complete sequence Length = 29436 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 16231 agaatggctcttgatgatct 16212
>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence Length = 121664 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 118698 agaatggctcttgatgatct 118717
>gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, complete sequence Length = 36966 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 19420 agaatggctcttgatgatct 19439
>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete sequence Length = 212406 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 acatctgcctccaatatctg 99 |||||||||||||||||||| Sbjct: 95288 acatctgcctccaatatctg 95307
>dbj|AK000198.1| Homo sapiens cDNA FLJ20191 fis, clone COLF0753 Length = 1764 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tggttcatttttctgcttct 404 |||||||||||||||||||| Sbjct: 1015 tggttcatttttctgcttct 1034
>gb|AC004842.2|AC004842 Homo sapiens PAC clone RP4-609N19 from 7p22, complete sequence Length = 120000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 77710 agaatggctcttgatgatct 77691
>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence Length = 138251 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 61782 agaatggctcttgatgatct 61801
>emb|AJ277441.1|HSA277441 Homo sapiens partial mRNA for xylosyltransferase I (XT-I gene) Length = 3728 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tggttcatttttctgcttct 404 |||||||||||||||||||| Sbjct: 3057 tggttcatttttctgcttct 3076
>emb|BX957237.11| Zebrafish DNA sequence from clone DKEY-22I11 in linkage group 19, complete sequence Length = 73296 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 9976 acttaatcacctttcttccc 9995
>gb|AC102012.7| Mus musculus chromosome 3, clone RP24-542B2, complete sequence Length = 155366 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 aggaagcaaagaaagaagta 191 |||||||||||||||||||| Sbjct: 82519 aggaagcaaagaaagaagta 82500
>dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-68E4, telomere region, complete sequence Length = 40302 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 32602 agaatggctcttgatgatct 32621
>gb|AC153864.5| Mus musculus 10 BAC RP23-345N8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196411 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ctttcttcccttgtttatgt 365 |||||||||||||||||||| Sbjct: 136483 ctttcttcccttgtttatgt 136464
>emb|AL929347.8| Human DNA sequence from clone RP3-433O3 on chromosome 22, complete sequence Length = 128374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agaatggctcttgatgatct 310 |||||||||||||||||||| Sbjct: 50760 agaatggctcttgatgatct 50779
>gb|AF037068.1|AF037068 Drosophila melanogaster putative zinc finger protein mRNA, partial cds Length = 1708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gctcttgatgatctttgtgg 316 |||||||||||||||||||| Sbjct: 1470 gctcttgatgatctttgtgg 1451
>emb|AJ539163.1|HSA539163 Homo sapiens mRNA for xylosyltransferase I (XYLT1 gene) Length = 4207 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tggttcatttttctgcttct 404 |||||||||||||||||||| Sbjct: 3538 tggttcatttttctgcttct 3557
>gb|AC109446.2| Homo sapiens chromosome 16 clone CTD-2576D5, complete sequence Length = 193519 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tggttcatttttctgcttct 404 |||||||||||||||||||| Sbjct: 65523 tggttcatttttctgcttct 65542
>emb|AL928928.4| Zebrafish DNA sequence from clone CH211-127C19, complete sequence Length = 163161 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 acttaatcacctttcttccc 355 |||||||||||||||||||| Sbjct: 19596 acttaatcacctttcttccc 19577
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ttccgggttctcttgttgaggaag 177 |||| ||||||||||||||||||| Sbjct: 943974 ttccaggttctcttgttgaggaag 943997 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,124,846 Number of Sequences: 3902068 Number of extensions: 5124846 Number of successful extensions: 113933 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113671 Number of HSP's gapped (non-prelim): 253 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)