Clone Name | rbasd19e04 |
---|---|
Clone Library Name | barley_pub |
>OAZ3_MOUSE (Q9R109) Ornithine decarboxylase antizyme 3 (ODC-Az 3) (AZ3)| (OAZ-t) Length = 195 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 126 SFVQSSQKAITLRPGPTIICKMIPCSALAQKEAL 227 S Q+ +TLRP + C +PCS L E+L Sbjct: 8 SITYKEQEDLTLRPHCCLPCSCLPCSCLQCSESL 41
>GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate| cyclase 2E) Length = 1108 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +3 Query: 87 MSNPCMGQVNLPSSFVQSSQKAITLRPGPTIICKMIPCSALAQKE--ALVHPFCPGDACS 260 + PC+ +L + V S+ ++ GP P LAQ+ ALV CPG + Sbjct: 104 LPEPCLTPGSLGA--VSSALTRVSGLVGPVNPAACRPAELLAQEAGVALVPWGCPGTRAA 161 Query: 261 GATMPAV 281 G T PAV Sbjct: 162 GTTAPAV 168
>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate| cyclase 2E) Length = 1108 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +3 Query: 87 MSNPCMGQVNLPSSFVQSSQKAITLRPGPTIICKMIPCSALAQKE--ALVHPFCPGDACS 260 + PC+ +L + V S+ ++ GP P LAQ+ ALV CPG + Sbjct: 104 LPEPCLTPGSLGA--VSSALSRVSGLVGPVNPAGCRPAELLAQEAGVALVPWGCPGTRAA 161 Query: 261 GATMPAV 281 G T PAV Sbjct: 162 GTTAPAV 168
>THIC_MYCTU (P66911) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +2 Query: 116 SAQLVRAELTKGYNIKTGTHYHMQNDPL 199 SA+LVR E+ +G + H+H +++P+ Sbjct: 106 SAELVRDEVARGRAVIPANHHHPESEPM 133
>THIC_MYCBO (P66912) Thiamine biosynthesis protein thiC| Length = 547 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +2 Query: 116 SAQLVRAELTKGYNIKTGTHYHMQNDPL 199 SA+LVR E+ +G + H+H +++P+ Sbjct: 106 SAELVRDEVARGRAVIPANHHHPESEPM 133
>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)| Length = 1799 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = +3 Query: 183 CKMIPCSALAQKEALVHPFCPGDACSGATMPA 278 C PC ++ P C G CSGA PA Sbjct: 1419 CATSPCGGAGCRDEDGQPRCGGLGCSGAAAPA 1450 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,304,763 Number of Sequences: 219361 Number of extensions: 1026720 Number of successful extensions: 2195 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2195 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)