Clone Name | rbasd19d24 |
---|---|
Clone Library Name | barley_pub |
>gb|AY108232.1| Zea mays PCO098921 mRNA sequence Length = 1480 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 529 ccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaaatcttgagcctc 588 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1212 ccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaggtcttcagcctc 1153 Query: 589 ttgtccgtgatgttccgcttccagtgcccgtcggtgaagttggccttctc 638 |||||| | |||||||||||| |||||||| |||||||| |||||||| Sbjct: 1152 gggtccgttacgttccgcttccaatgcccgtccgtgaagttcgccttctc 1103
>gb|BT017624.1| Zea mays clone EL01N0436A07.c mRNA sequence Length = 1367 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 529 ccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaaatcttgagcctc 588 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1007 ccccagtgccatagcatgctctcccagaagcagaacttctcgaagcaagtcttcagcctc 948 Query: 589 ttgtccgtgatgttccgcttccagtgcccgtcggtgaagttggccttctc 638 || || |||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 947 ggatcggttatgttccgtttccaatgcccgtcggtgaagttcgccttctc 898
>gb|AY108233.1| Zea mays PCO098922 mRNA sequence Length = 1428 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 529 ccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaaatcttgagcctc 588 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1092 ccccagtgccatagcatgctctcccagaagcagaacttctcgaagcaagtcttcagcctc 1033 Query: 589 ttgtccgtgatgttccgcttccagtgcccgtcggtgaagttggccttctc 638 || || |||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1032 ggatcggttatgttccgtttccaatgcccgtcggtgaagttcgccttctc 983
>gb|AY110752.1| Zea mays CL108_1 mRNA sequence Length = 1879 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 529 ccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaaatcttgagcctc 588 ||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1500 ccccaatgccagagcatgctctcccagaagcagaacttctcaaagcacgtcttgagcctg 1441 Query: 589 ttgtccgtga 598 ||||||||| Sbjct: 1440 gtgtccgtga 1431
>ref|NM_190158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1860 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 1793 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 1743
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 38195352 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 38195302 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 38195500 agcatagctacctttacaagctgttgctat 38195471 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 atccatccatccatcaaccaa 227 ||||||||||||||||||||| Sbjct: 42341395 atccatccatccatcaaccaa 42341415
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 114586 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 114536 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 114734 agcatagctacctttacaagctgttgctat 114705
>dbj|AK105039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E02, full insert sequence Length = 329 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 51 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 199 agcatagctacctttacaagctgttgctat 170
>dbj|AK100345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082H20, full insert sequence Length = 2649 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 2130 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 2080 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 2278 agcatagctacctttacaagctgttgctat 2249
>dbj|AK071195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087O18, full insert sequence Length = 2078 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 1653 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 1603 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 1801 agcatagctacctttacaagctgttgctat 1772
>dbj|AK067519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112C08, full insert sequence Length = 3570 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 526 tcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagcaa 576 |||||||||||||| | ||||||||||||||||||||||||||| |||||| Sbjct: 3128 tcaccccagtgccataacatgctctcccagaagcagaacttctcaaagcaa 3078 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 339 agcatggctacctttacaagctgttgctat 368 ||||| |||||||||||||||||||||||| Sbjct: 3276 agcatagctacctttacaagctgttgctat 3247
>ref|XM_475247.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2016 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 1965 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 1915
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 67661 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 67711
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 10242 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 10292
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 20754437 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 20754487 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 tatccatccatccatcaaccaa 227 |||||||||||||||||||||| Sbjct: 21309580 tatccatccatccatcaaccaa 21309601 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaac 272 |||||||||||||||||||| Sbjct: 27973885 gcggcagcagcagcagcaac 27973866 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaa 271 |||||||||||||||||||| Sbjct: 24091952 agcggcagcagcagcagcaa 24091971 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 atacattacattacattaca 126 |||||||||||||||||||| Sbjct: 64340 atacattacattacattaca 64359
>dbj|AK064877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J17, full insert sequence Length = 2410 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 2250 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 2200
>dbj|AK061637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A11, full insert sequence Length = 684 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaacttctcgaagca 575 ||||||||| ||| |||||||||||||||| |||||||||||||| |||| Sbjct: 522 ctcaccccaatgcagcagcatgctctcccagtagcagaacttctcgtagca 472
>ref|XM_311414.2| Anopheles gambiae str. PEST ENSANGP00000016846 (ENSANGG00000014357), partial mRNA Length = 1722 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 251 gagcggcagcagcagcagcaacgagagcg 279 |||||||||||||||||||||||| |||| Sbjct: 336 gagcggcagcagcagcagcaacgacagcg 364
>ref|NM_012192.2| Homo sapiens fracture callus 1 homolog (rat) (FXC1), mRNA Length = 1470 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 60 tggagcggcagcagcagcagcaac 83
>emb|BX469919.10| Zebrafish DNA sequence from clone DKEY-15J7 in linkage group 16, complete sequence Length = 219865 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 106 catacattacattacattacaaaa 129 |||||||||||||||||||||||| Sbjct: 83838 catacattacattacattacaaaa 83815
>gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, complete sequence Length = 112295 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 70332 tggagcggcagcagcagcagcaac 70355
>dbj|AK002130.1| Homo sapiens cDNA FLJ11268 fis, clone PLACE1009186 Length = 1179 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 33 tggagcggcagcagcagcagcaac 56
>gb|AY763168.1| Limnatis cf. nilotica PT-2005 isolate Lnil 5.8S ribosomal RNA gene, partial sequence; and internal transcribed spacer 2, complete sequence Length = 564 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacgaga 276 |||||||||||||||||||||||| Sbjct: 251 gcggcagcagcagcagcaacgaga 228
>gb|AF183415.1|AF183415 Homo sapiens fracture callus mRNA, complete cds Length = 1470 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 60 tggagcggcagcagcagcagcaac 83
>dbj|AK058048.1| Homo sapiens cDNA FLJ25319 fis, clone TST00259 Length = 1053 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 18 tggagcggcagcagcagcagcaac 41
>gb|AF152355.1|AF152355 Homo sapiens FXC1 mRNA, complete cds Length = 312 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 2 tggagcggcagcagcagcagcaac 25
>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20, complete sequence Length = 209360 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 106 catacattacattacattacaaaa 129 |||||||||||||||||||||||| Sbjct: 45076 catacattacattacattacaaaa 45099 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 107838 tacattacattacattacaaa 107858
>gb|AF150105.1|AF150105 Homo sapiens small zinc finger-like protein (TIM9b) mRNA, complete cds Length = 1469 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 61 tggagcggcagcagcagcagcaac 84
>gb|L15361.1|HUMTRPSUB Human tRNA pseudogene related DNA sequence Length = 1431 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 321 tggagcggcagcagcagcagcaac 298
>gb|BC011014.1| Homo sapiens fracture callus 1 homolog (rat), mRNA (cDNA clone MGC:13456 IMAGE:4070042), complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaac 272 |||||||||||||||||||||||| Sbjct: 14 tggagcggcagcagcagcagcaac 37
>gb|AF453651.1| Drosophila nigrodunni microsatellite ND10 sequence Length = 576 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacga 274 ||||||||||||||||||||||| Sbjct: 163 agcggcagcagcagcagcaacga 141
>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence Length = 207556 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 207 atccatccatccatcaaccaaaa 229 ||||||||||||||||||||||| Sbjct: 135847 atccatccatccatcaaccaaaa 135869
>gb|AC123051.4| Mus musculus BAC clone RP24-366E4 from chromosome 6, complete sequence Length = 143909 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaaccaaaa 229 ||||||||||||||||||||||| Sbjct: 12515 atccatccatccatcaaccaaaa 12493
>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence Length = 211060 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 107 atacattacattacattacaaaa 129 ||||||||||||||||||||||| Sbjct: 110921 atacattacattacattacaaaa 110899
>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14, complete sequence Length = 204730 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaaag 130 ||||||||||||||||||||||| Sbjct: 150055 tacattacattacattacaaaag 150077 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 acattacattacattacaaaa 129 ||||||||||||||||||||| Sbjct: 150027 acattacattacattacaaaa 150047 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 atacattacattacattaca 126 |||||||||||||||||||| Sbjct: 150049 atacattacattacattaca 150068
>emb|CR607360.1| full-length cDNA clone CS0DC029YA07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagcaac 272 ||||||||||||||||||||||| Sbjct: 1 ggagcggcagcagcagcagcaac 23
>emb|CR599487.1| full-length cDNA clone CS0DC029YF07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1133 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagcaac 272 ||||||||||||||||||||||| Sbjct: 1 ggagcggcagcagcagcagcaac 23
>gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete sequence Length = 83822 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 525 ctcaccccagtgccacagcatgctctcccagaagcagaa 563 ||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 10067 ctcaccccaatgccaaagcatactctcccagaaacagaa 10105
>emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 in linkage group 6, complete sequence Length = 163804 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 atacattacattacattacaaaa 129 ||||||||||||||||||||||| Sbjct: 93736 atacattacattacattacaaaa 93758
>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19, complete sequence Length = 170971 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 109 acattacattacattacaaaagctaac 135 |||||||||||||| |||||||||||| Sbjct: 71390 acattacattacataacaaaagctaac 71416
>emb|BX005064.4| Zebrafish DNA sequence from clone CH211-134N17 in linkage group 19, complete sequence Length = 134157 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 109 acattacattacattacaaaagctaac 135 |||||||||||||| |||||||||||| Sbjct: 88710 acattacattacataacaaaagctaac 88684
>emb|BX890543.17| Zebrafish DNA sequence from clone CH211-235H1 in linkage group 14, complete sequence Length = 159163 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 atacattacattacattacaaaa 129 ||||||||||||||||||||||| Sbjct: 40118 atacattacattacattacaaaa 40140
>emb|AL844150.6| Zebrafish DNA sequence from clone DKEY-246K2, complete sequence Length = 203058 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 107 atacattacattacattacaaaa 129 ||||||||||||||||||||||| Sbjct: 147184 atacattacattacattacaaaa 147206
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 tatccatccatccatcaaccaa 227 |||||||||||||||||||||| Sbjct: 96186 tatccatccatccatcaaccaa 96207
>ref|NM_195541.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0047B19.4), mRNA Length = 2148 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 912 agcggcagcagcagcagcaacg 891
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 tatccatccatccatcaaccaa 227 |||||||||||||||||||||| Sbjct: 26902 tatccatccatccatcaaccaa 26923
>emb|BX001001.16| Zebrafish DNA sequence from clone CH211-262P15 in linkage group 18, complete sequence Length = 138944 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 51119 tacattacattacattacaaaa 51140
>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence Length = 210372 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 156004 tacattacattacattacaaaa 156025
>gb|AC108430.11| Mus musculus chromosome 14, clone RP23-166L19, complete sequence Length = 204251 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 tatccatccatccatcaaccaaaaaa 231 |||||||||||||||| ||||||||| Sbjct: 191473 tatccatccatccatccaccaaaaaa 191498
>gb|AC112711.3| Homo sapiens BAC clone RP13-968A2 from 7, complete sequence Length = 34335 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 atccatccatccatcaaccaaa 228 |||||||||||||||||||||| Sbjct: 15313 atccatccatccatcaaccaaa 15334
>emb|BX051505.1|CNS09BWL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC28DE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagca 270 |||||||||||||||||||||| Sbjct: 631 tggagcggcagcagcagcagca 652
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 81693 agcggcagcagcagcagcaacg 81714
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacga 274 |||||||||||||||||||||| Sbjct: 142368 gcggcagcagcagcagcaacga 142347 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaacg 273 |||||| |||||||||||||||||| Sbjct: 107113 tggagcagcagcagcagcagcaacg 107137
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacga 274 |||||||||||||||||||||| Sbjct: 11788 gcggcagcagcagcagcaacga 11767
>emb|BX957352.9| Zebrafish DNA sequence from clone CH211-114O15 in linkage group 23, complete sequence Length = 180880 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 86261 tacattacattacattacaaaa 86282
>gb|AF367720.1| Mus musculus lipoprotein receptor-related protein (Lrp1) mRNA, complete cds Length = 14839 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 467 agcggcagcagcagcagcaacg 446
>gb|AF369389.1|F369389S01 Mus musculus strain 129P3/J lipoprotein receptor-related protein (Lrp1) gene, exon 1 Length = 512 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 467 agcggcagcagcagcagcaacg 446
>emb|BX950191.7| Zebrafish DNA sequence from clone DKEY-88F24 in linkage group 18, complete sequence Length = 141551 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 87880 tacattacattacattacaaaa 87859
>gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0082N11, from chromosome 10, complete sequence Length = 127525 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 87153 agcggcagcagcagcagcaacg 87174
>emb|BX572103.8| Zebrafish DNA sequence from clone CH211-215L16 in linkage group 11, complete sequence Length = 204701 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 202467 tacattacattacattacaaaa 202446
>emb|BX546499.15| Zebrafish DNA sequence from clone DKEY-27P18 in linkage group 5, complete sequence Length = 194807 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 62169 tacattacattacattacaaaa 62148
>gb|AC113339.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0047B19, from chromosome 10, complete sequence Length = 137015 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 19628 agcggcagcagcagcagcaacg 19649
>dbj|AK149974.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530110P14 product:low density lipoprotein receptor-related protein 1, full insert sequence Length = 3580 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 338 agcggcagcagcagcagcaacg 317
>dbj|AK153549.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830174K15 product:low density lipoprotein receptor-related protein 1, full insert sequence Length = 2886 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 318 agcggcagcagcagcagcaacg 297
>dbj|AK153375.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830150I18 product:low density lipoprotein receptor-related protein 1, full insert sequence Length = 2886 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 318 agcggcagcagcagcagcaacg 297
>emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in linkage group 1, complete sequence Length = 255895 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 17313 tacattacattacattacaaaa 17292
>dbj|AK078273.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430558M03 product:low density lipoprotein receptor-related protein 1, full insert sequence Length = 3437 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 497 agcggcagcagcagcagcaacg 476
>tpg|BK001410.1| TPA: TPA_exp: Homo sapiens myosin heavy chain (MYH16) pseudogene, complete sequence Length = 83303 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 atccatccatccatcaaccaaa 228 |||||||||||||||||||||| Sbjct: 15313 atccatccatccatcaaccaaa 15334
>emb|BX247903.20| Zebrafish DNA sequence from clone CH211-112C12 in linkage group 18, complete sequence Length = 188859 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 136865 tacattacattacattacaaaa 136886
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacga 274 |||||||||||||||||||||| Sbjct: 19360536 gcggcagcagcagcagcaacga 19360515 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagcaacg 273 |||||| |||||||||||||||||| Sbjct: 19325281 tggagcagcagcagcagcagcaacg 19325305
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 7576634 agcggcagcagcagcagcaacg 7576655
>emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, complete sequence Length = 161727 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 133971 tacattacattacattacaaaa 133950
>gb|AC119043.4| Homo sapiens 3 BAC RP11-582I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164027 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 207 atccatccatccatcaaccaaaaaat 232 ||||||||||||||||| |||||||| Sbjct: 54856 atccatccatccatcaatcaaaaaat 54881
>ref|XM_319816.2| Anopheles gambiae str. PEST ENSANGP00000023643 (ENSANGG00000021128), partial mRNA Length = 813 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagca 270 |||||||||||||||||||||| Sbjct: 624 tggagcggcagcagcagcagca 645
>gb|AC006961.16|AC006961 Homo sapiens chromosome 18, clone RP11-31P16, complete sequence Length = 171419 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaaccaaa 228 |||||||||||||||||||||| Sbjct: 29437 atccatccatccatcaaccaaa 29416
>emb|CR931761.6| Zebrafish DNA sequence from clone DKEY-27P1 in linkage group 10, complete sequence Length = 151872 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 31443 tacattacattacattacaaaa 31422
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaacg 273 |||||||||||||||||||||| Sbjct: 7580833 agcggcagcagcagcagcaacg 7580854
>emb|AL953904.10| Zebrafish DNA sequence from clone CH211-266I6, complete sequence Length = 166088 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 105601 tacattacattacattacaaaa 105580
>gb|AC132138.2| Mus musculus BAC clone RP23-178E7 from 8, complete sequence Length = 204856 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaaa 129 |||||||||||||||||||||| Sbjct: 185001 tacattacattacattacaaaa 184980
>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1, complete sequence Length = 229480 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 atacattacattacattacaaa 128 |||||||||||||||||||||| Sbjct: 214007 atacattacattacattacaaa 213986 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 atacattacattacattacaaa 128 |||||||||||||||||||||| Sbjct: 203682 atacattacattacattacaaa 203661
>emb|CT025537.7| Mouse DNA sequence from clone RP23-454O17 on chromosome 14, complete sequence Length = 192695 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 206 tatccatccatccatcaaccaaaaaa 231 |||||||||||||||| ||||||||| Sbjct: 175295 tatccatccatccatccaccaaaaaa 175320
>gb|BC088923.1| Xenopus laevis cDNA clone IMAGE:6326868 Length = 708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ttattatccatccatccatca 222 ||||||||||||||||||||| Sbjct: 671 ttattatccatccatccatca 651
>gb|BC052629.1| Mus musculus transforming growth factor, beta receptor II, transcript variant 1, mRNA (cDNA clone MGC:54755 IMAGE:6310023), complete cds Length = 8165 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 2150 agcggcagcagcagcagcaac 2170
>ref|XM_466066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gcagcagcagcagcaacgaga 276 ||||||||||||||||||||| Sbjct: 18 gcagcagcagcagcaacgaga 38
>ref|XM_517975.1| PREDICTED: Pan troglodytes similar to Monocyte differentiation antigen CD14 precursor (Myeloid cell-specific leucine-rich glycoprotein) (LOC462118), mRNA Length = 960 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 71 agcggcagcagcagcagcaac 51
>gb|AC166933.3| Mus musculus chromosome 5, clone wi1-2074J17, complete sequence Length = 41344 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 attattatccatccatccatc 221 ||||||||||||||||||||| Sbjct: 9795 attattatccatccatccatc 9775
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 1843806 agcggcagcagcagcagcaac 1843786
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gcggcagcagcagcagcaacg 273 ||||||||||||||||||||| Sbjct: 153684 gcggcagcagcagcagcaacg 153704 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gcagcagcagcagcaacgaga 276 ||||||||||||||||||||| Sbjct: 20121 gcagcagcagcagcaacgaga 20101
>gb|AY022038.1| Oryza sativa microsatellite MRG4363 containing (TC)X13, closest to marker C953A, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacg 273 ||||||||||||||||||||| Sbjct: 170 gcggcagcagcagcagcaacg 150
>gb|AC004633.1| Homo sapiens chromosome 5, P1 clone 41e13 (LBNL H151), complete sequence Length = 89484 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 70987 agcggcagcagcagcagcaac 70967
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 ttattatccatccatccatca 222 ||||||||||||||||||||| Sbjct: 101770 ttattatccatccatccatca 101750
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 cacagcatgctctcccagaag 558 ||||||||||||||||||||| Sbjct: 152338 cacagcatgctctcccagaag 152358
>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence Length = 108727 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 102878 agcggcagcagcagcagcaac 102898
>gb|AC012650.9| Drosophila melanogaster clone BACN24N09, complete sequence Length = 74083 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 4690 agcggcagcagcagcagcaac 4710
>gb|AC008317.7| Drosophila melanogaster clone BACR08N17, complete sequence Length = 169100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 152567 agcggcagcagcagcagcaac 152587
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 40468 agcggcagcagcagcagcaac 40488
>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence Length = 186333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 157699 agcggcagcagcagcagcaac 157719
>ref|XM_362882.1| Magnaporthe grisea 70-15 hypothetical protein (MG08555.4) partial cds Length = 1785 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 401 ggagcggcagcagcagcagca 421
>ref|XM_866962.1| PREDICTED: Bos taurus similar to Rab GTPase binding effector protein 2 (Rabaptin-5beta), transcript variant 2 (LOC511736), mRNA Length = 2557 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 366 ggagcggcagcagcagcagca 386
>ref|XM_879335.1| PREDICTED: Bos taurus similar to Rab GTPase binding effector protein 2 (Rabaptin-5beta), transcript variant 8 (LOC511736), mRNA Length = 2530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 285 ggagcggcagcagcagcagca 305
>ref|XM_879300.1| PREDICTED: Bos taurus similar to Rab GTPase binding effector protein 2 (Rabaptin-5beta), transcript variant 7 (LOC511736), mRNA Length = 2449 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 366 ggagcggcagcagcagcagca 386
>ref|XM_879269.1| PREDICTED: Bos taurus similar to Rab GTPase binding effector protein 2 (Rabaptin-5beta), transcript variant 6 (LOC511736), mRNA Length = 2611 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 366 ggagcggcagcagcagcagca 386
>ref|XM_879240.1| PREDICTED: Bos taurus similar to Rab GTPase binding effector protein 2 (Rabaptin-5beta), transcript variant 5 (LOC511736), mRNA Length = 1343 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 366 ggagcggcagcagcagcagca 386
>ref|XM_420463.1| PREDICTED: Gallus gallus similar to hypothetical protein MGC33302 (LOC422498), mRNA Length = 2625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 264 ggagcggcagcagcagcagca 284
>ref|XM_960366.1| Neurospora crassa OR74A hypothetical protein (NCU02686.1) partial mRNA Length = 1599 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 ggttggagcggcagcagcagcagcaacga 274 ||||| ||| ||||||||||||||||||| Sbjct: 1298 ggttgcagcagcagcagcagcagcaacga 1326
>ref|NM_000591.2| Homo sapiens CD14 molecule (CD14), transcript variant 1, mRNA Length = 1623 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 395 agcggcagcagcagcagcaac 375
>ref|NM_001040021.1| Homo sapiens CD14 molecule (CD14), transcript variant 2, mRNA Length = 1530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 302 agcggcagcagcagcagcaac 282
>gb|AC149221.2| Mus musculus BAC clone RP23-402P22 from chromosome 7, complete sequence Length = 202580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 attattatccatccatccatc 221 ||||||||||||||||||||| Sbjct: 197742 attattatccatccatccatc 197722
>ref|XM_868154.1| PREDICTED: Bos taurus similar to interferon gamma inducible protein 30, transcript variant 1 (LOC615930), mRNA Length = 1011 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 114 agcggcagcagcagcagcaac 94
>ref|XM_881331.1| PREDICTED: Bos taurus similar to interferon gamma inducible protein 30, transcript variant 2 (LOC615930), mRNA Length = 1226 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 114 agcggcagcagcagcagcaac 94
>ref|XM_331884.1| Neurospora crassa OR74A hypothetical protein (NCU02686.1) partial mRNA Length = 1599 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 ggttggagcggcagcagcagcagcaacga 274 ||||| ||| ||||||||||||||||||| Sbjct: 1298 ggttgcagcagcagcagcagcagcaacga 1326
>ref|NM_020975.3| Homo sapiens ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease) (RET), transcript variant 2, mRNA Length = 4757 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 242 agcggcagcagcagcagcaac 222
>ref|NM_020630.3| Homo sapiens ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease) (RET), transcript variant 4, mRNA Length = 4161 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 242 agcggcagcagcagcagcaac 222
>ref|XM_676331.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8154.2), mRNA Length = 1011 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 gcagcagcagcagcaacgaga 276 ||||||||||||||||||||| Sbjct: 242 gcagcagcagcagcaacgaga 262
>gb|AC131745.4| Mus musculus BAC clone RP23-55L3 from chromosome 14, complete sequence Length = 240647 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 146257 agcggcagcagcagcagcaac 146277
>gb|AC134859.4| Mus musculus BAC clone RP23-363G20 from chromosome 9, complete sequence Length = 182883 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 46063 agcggcagcagcagcagcaac 46043
>gb|AC158987.3| Mus musculus BAC clone RP23-366K1 from chromosome 9, complete sequence Length = 222125 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 ggcagcagcagcagcaacgag 275 ||||||||||||||||||||| Sbjct: 170626 ggcagcagcagcagcaacgag 170606
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 cggttggagcggcagcagcagcagc 269 |||||||||| |||||||||||||| Sbjct: 14181598 cggttggagcagcagcagcagcagc 14181574 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaac 272 |||||||||||||||||||| Sbjct: 9464214 gcggcagcagcagcagcaac 9464195
>ref|XM_535858.2| PREDICTED: Canis familiaris similar to spermatogenesis associated 16 (LOC478689), mRNA Length = 2024 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 aactactgctgcaccaacgca 153 ||||||||||||||||||||| Sbjct: 1878 aactactgctgcaccaacgca 1898
>gb|BC060027.1| Xenopus laevis hypothetical protein MGC68686, mRNA (cDNA clone MGC:68686 IMAGE:4033149), complete cds Length = 4192 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ggcagcagcagcagcaacgag 275 ||||||||||||||||||||| Sbjct: 233 ggcagcagcagcagcaacgag 253
>gb|BC033163.1| Homo sapiens AT rich interactive domain 3A (BRIGHT- like), mRNA (cDNA clone IMAGE:4543089), partial cds Length = 1489 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gcggcagcagcagcagcaacg 273 ||||||||||||||||||||| Sbjct: 1211 gcggcagcagcagcagcaacg 1231
>gb|AC119219.6| Mus musculus chromosome 12, clone RP24-201C18, complete sequence Length = 187098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tatccatccatccatcaacca 226 ||||||||||||||||||||| Sbjct: 148574 tatccatccatccatcaacca 148554 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaacca 226 |||||||||||||||||||| Sbjct: 148944 atccatccatccatcaacca 148925
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 acattacattacattacaaaa 129 ||||||||||||||||||||| Sbjct: 19537 acattacattacattacaaaa 19517
>ref|XM_750048.1| Aspergillus fumigatus Af293 involucrin repeat protein (Afu2g08060) partial mRNA Length = 16617 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cggttggagcggcagcagcag 265 ||||||||||||||||||||| Sbjct: 1109 cggttggagcggcagcagcag 1129
>gb|AC140248.3| Mus musculus BAC clone RP24-285L8 from chromosome 7, complete sequence Length = 182854 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 attattatccatccatccatc 221 ||||||||||||||||||||| Sbjct: 131875 attattatccatccatccatc 131855
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 attattatccatccatccatc 221 ||||||||||||||||||||| Sbjct: 9164 attattatccatccatccatc 9144
>ref|XM_799286.1| Trypanosoma cruzi strain CL Brener septum formation inhibitor, Maf-like protein (Tc00.1047053503663.10) partial mRNA Length = 750 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 221 agcggcagcagcagcagcaac 241
>gb|AC122286.4| Mus musculus BAC clone RP23-252F4 from chromosome 6, complete sequence Length = 178633 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 cagcatgctctcccagaagca 560 ||||||||||||||||||||| Sbjct: 58747 cagcatgctctcccagaagca 58767
>ref|XM_804881.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511557.29) partial mRNA Length = 1074 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 770 agcggcagcagcagcagcaac 790
>gb|AF281160.2| Bos taurus heparanase mRNA, complete cds Length = 1662 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 82 ggagcggcagcagcagcagca 62
>ref|XM_811232.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507083.10) partial mRNA Length = 2001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 cggcagcagcagcagcaacga 274 ||||||||||||||||||||| Sbjct: 1846 cggcagcagcagcagcaacga 1826
>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence Length = 215972 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 tatccatccatccatcaacca 226 ||||||||||||||||||||| Sbjct: 123180 tatccatccatccatcaacca 123200 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atccatccatccatcaacca 226 |||||||||||||||||||| Sbjct: 122810 atccatccatccatcaacca 122829
>emb|CR626886.6| Zebrafish DNA sequence from clone CH211-255I3 in linkage group 16, complete sequence Length = 165396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 6732 tacattacattacattacaaa 6752
>emb|CR657077.2|CNS0F5YZ Tetraodon nigroviridis full-length cDNA Length = 1350 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaaccaa 227 ||||||||||||||||||||| Sbjct: 530 atccatccatccatcaaccaa 510
>emb|CR376723.15| Zebrafish DNA sequence from clone DKEY-90N12 in linkage group 8, complete sequence Length = 213541 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 128140 tacattacattacattacaaa 128120
>gb|AC144513.22| Medicago truncatula clone mth2-15d23, complete sequence Length = 112032 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 5227 catacattacattacattaca 5247
>emb|CR847541.8| Zebrafish DNA sequence from clone CH211-135B5 in linkage group 12, complete sequence Length = 178133 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 atacattacattacattacaa 127 ||||||||||||||||||||| Sbjct: 114489 atacattacattacattacaa 114469
>emb|CR925698.8| Zebrafish DNA sequence from clone DKEY-287I12 in linkage group 11, complete sequence Length = 158155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 aattattatccatccatccat 220 ||||||||||||||||||||| Sbjct: 134035 aattattatccatccatccat 134055
>ref|NM_009371.2| Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA Length = 4702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 2174 agcggcagcagcagcagcaac 2194
>gb|AY211063.1| Tribolium castaneum strain cSM microsatellite sequence Length = 258 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 40 agcggcagcagcagcagcaac 60
>emb|AL845353.7| Human DNA sequence from clone DAQB-47P19 on chromosome 6 Contains the 3' end of the MRPS18B gene for mitochondrial ribosomal protein S18B, the C6orf134 gene for chromosome 6 open reading frame 134, the C6orf136 gene for chromosome 6 open reading frame 136, the DHX16 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 16, the KIAA1949 gene, the NRM gene for nurim (nuclear envelope membrane protein), the RPL7P4 pseudogene for ribosomal protein L7 pseudogene 4, the MDC1 gene for mediator of DNA damage checkpoint 1, the TUBB gene for tubulin, beta polypeptide, the FLOT1 gene for flotillin 1, the IER3 gene for immediate early response 3 and 8 CpG islands, complete sequence Length = 130755 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 68974 ggagcggcagcagcagcagca 68954
>emb|AL732442.7| Human DNA sequence from clone XXbac-48F10 on chromosome 6 contains the 3' end of the MRPS18B gene for mitochondrial ribosomal protein S18B, two novel proteins, a prothymosin, alpha (PTMA) pseudogene, the DDX16 gene for DEAD/H box polypeptide 16 , the gene for KIAA1949 protein, the NRM gene for nurim and four CpG islands, complete sequence Length = 71418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 63343 ggagcggcagcagcagcagca 63323
>emb|AL929101.4| Human DNA sequence from clone RP11-22B10 on chromosome X Contains the GSPT2 gene for G1 to S phase transition 2, a pseudogene similar to part of p30 (nuclear protein p30), a zinc finger protein pseudogene, the 5' end of a variant of the MAGED1 gene for melanoma antigen, family D, 1 and two CpG islands, complete sequence Length = 157110 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 110618 agcggcagcagcagcagcaac 110598
>gb|BC066644.1| Homo sapiens KIAA1949, transcript variant 3, mRNA (cDNA clone MGC:71094 IMAGE:5575643), complete cds Length = 2924 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 468 ggagcggcagcagcagcagca 488
>emb|AL662797.7| Human DNA sequence from clone XXbac-252P9 on chromosome 6 contains the 3' end of a putative novel transcript, the NRM gene for nurim (nuclear envelope membrane protein), a ribosomal protein L7 (RPL7) pseudogene, the gene for KIAA0170 protein, the TUBB gene for tubulin, beta polypeptide, the FLOT1 gene for flotillin 1, the IER3 gene for immediate early response 3, a putative novel transcript and five CpG islands, complete sequence Length = 171627 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 8825 ggagcggcagcagcagcagca 8805
>gb|BC010507.2| Homo sapiens CD14 molecule, transcript variant 1, mRNA (cDNA clone MGC:17221 IMAGE:4149008), complete cds Length = 1374 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 146 agcggcagcagcagcagcaac 126
>emb|AL512330.13| Human DNA sequence from clone RP11-334N17 on chromosome 1 Contains a novel gene, complete sequence Length = 61505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tatccatccatccatcaacca 226 ||||||||||||||||||||| Sbjct: 4806 tatccatccatccatcaacca 4786
>emb|AL354977.10| Human DNA sequence from clone RP11-509J21 on chromosome 9 Contains the 3' end of a novel gene and three novel genes, complete sequence Length = 163447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 117606 catacattacattacattaca 117626
>emb|AL121868.11|HSA541I12 Human DNA sequence from clone RP11-541I12 on chromosome Xq22.1-22.3, complete sequence Length = 118269 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 41139 tacattacattacattacaaa 41159
>emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in linkage group 23, complete sequence Length = 271754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 154922 tacattacattacattacaaa 154902
>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete sequence Length = 243063 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 acattacattacattacaaaa 129 ||||||||||||||||||||| Sbjct: 203430 acattacattacattacaaaa 203450
>emb|BX548051.11| Zebrafish DNA sequence from clone CH211-203M19 in linkage group 16, complete sequence Length = 162546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 104042 catacattacattacattaca 104062
>emb|BX062692.1|CNS09KJC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1004 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 428 agcggcagcagcagcagcaac 408
>emb|BX062691.1|CNS09KJB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 590 agcggcagcagcagcagcaac 610
>emb|BX049326.1|CNS09A82 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC25AH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 96 ggagcggcagcagcagcagca 116
>emb|BX033989.1|CNS08YE1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 747 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 84 ggagcggcagcagcagcagca 104
>ref|XM_782962.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6171-PA (LOC583036), mRNA Length = 3472 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 accatacattacattacatta 124 ||||||||||||||||||||| Sbjct: 3110 accatacattacattacatta 3090
>emb|X15262.1|HSRET5 Human mRNA for ret proto-oncogene 5'-end Length = 989 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 211 agcggcagcagcagcagcaac 191
>emb|BX842635.1| Neurospora crassa DNA linkage group I BAC contig B12J7 Length = 94169 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ggttggagcggcagcagcagcagcaacga 274 ||||| ||| ||||||||||||||||||| Sbjct: 93922 ggttgcagcagcagcagcagcagcaacga 93894
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8 Length = 138191 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 ggttggagcggcagcagcagcagcaacga 274 ||||| ||| ||||||||||||||||||| Sbjct: 137216 ggttgcagcagcagcagcagcagcaacga 137244
>gb|BC060828.1| Homo sapiens AT rich interactive domain 3A (BRIGHT- like), mRNA (cDNA clone MGC:71697 IMAGE:30342057), complete cds Length = 2825 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 gcggcagcagcagcagcaacg 273 ||||||||||||||||||||| Sbjct: 1951 gcggcagcagcagcagcaacg 1971
>emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clone 103B4 Length = 26697 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 11952 agcggcagcagcagcagcaac 11972
>gb|BC004257.1| Homo sapiens ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease), transcript variant 4, mRNA (cDNA clone MGC:10752 IMAGE:3160389), complete cds Length = 3486 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 242 agcggcagcagcagcagcaac 222
>gb|BC003072.2| Homo sapiens ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease), mRNA (cDNA clone IMAGE:3507569), complete cds Length = 2210 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 242 agcggcagcagcagcagcaac 222
>emb|BX901918.12| Zebrafish DNA sequence from clone DKEY-189N19 in linkage group 2, complete sequence Length = 171438 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 42516 tacattacattacattacaaa 42536
>emb|CR388058.6| Zebrafish DNA sequence from clone DKEY-184L17 in linkage group 8, complete sequence Length = 141160 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 acattacattacattacaaaa 129 ||||||||||||||||||||| Sbjct: 20825 acattacattacattacaaaa 20845
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 86146 tacattacattacattacaaa 86126
>gb|BT007331.1| Homo sapiens CD14 antigen mRNA, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 41 agcggcagcagcagcagcaac 21
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21, complete sequence Length = 217310 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 acattacattacattacaaaa 129 ||||||||||||||||||||| Sbjct: 203657 acattacattacattacaaaa 203677
>emb|CR788320.11| Zebrafish DNA sequence from clone DKEY-217F16 in linkage group 13, complete sequence Length = 174497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 153482 catacattacattacattaca 153462 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 atacattacattacattaca 126 |||||||||||||||||||| Sbjct: 82992 atacattacattacattaca 82973
>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete sequence Length = 207382 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 140338 tacattacattacattacaaa 140318
>emb|BX957331.5| Zebrafish DNA sequence from clone CH211-103O20 in linkage group 12, complete sequence Length = 159130 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 atacattacattacattacaa 127 ||||||||||||||||||||| Sbjct: 82329 atacattacattacattacaa 82349
>emb|BX647622.1|HSM807768 Homo sapiens mRNA; cDNA DKFZp686M1715 (from clone DKFZp686M1715) Length = 2986 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 410 ggagcggcagcagcagcagca 430
>gb|AC116353.2| Homo sapiens chromosome 5 clone RP11-515C16, complete sequence Length = 220535 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 88654 agcggcagcagcagcagcaac 88674
>emb|BX927372.14| Zebrafish DNA sequence from clone CH211-241H14 in linkage group 13, complete sequence Length = 138336 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 30347 tacattacattacattacaaa 30327
>emb|AL591481.5| Zebrafish DNA sequence from clone BUSM1-101L20 in linkage group 2 Contains 37 TCR-alpha V segments (II-1 to II-37 according to annotation by Tatsuya Ota) two of which are pseudogenes (II-21, II-22) and a CpG island, complete sequence Length = 100317 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 ggttggagcggcagcagcagcagca 270 ||||| ||||||||||||||||||| Sbjct: 70625 ggttgtagcggcagcagcagcagca 70649
>emb|AL603744.3| Zebrafish DNA sequence from clone BUSM1-79M10 Contains two novel genes and two transposase/reverse transcriptase pseudogenes, complete sequence Length = 72590 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 17849 tacattacattacattacaaa 17869
>emb|BX470099.5| Zebrafish DNA sequence from clone DKEY-14P11 in linkage group 23, complete sequence Length = 199831 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 25364 tacattacattacattacaaa 25384
>gb|AC093549.1| Drosophila melanogaster 3L BAC RP98-14L10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180633 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 29889 agcggcagcagcagcagcaac 29909
>emb|CR788240.3| Human DNA sequence from clone DAMC-316D20 on chromosome 6, complete sequence Length = 75074 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 19277 ggagcggcagcagcagcagca 19257
>emb|CR759873.4| Human DNA sequence from clone DAAP-285E11 on chromosome 6, complete sequence Length = 72240 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 27481 ggagcggcagcagcagcagca 27461
>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence Length = 258929 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 39463 agcggcagcagcagcagcaac 39443
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 cggttggagcggcagcagcagcagc 269 |||||||||| |||||||||||||| Sbjct: 55889 cggttggagcagcagcagcagcagc 55865
>emb|AJ640019.1| Tetracapsuloides bryosalmonae 18S rRNA gene (partial), ITS1 and 5.8S rRNA (partial), isolate FV3402b Length = 590 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 ccatacattacattacattac 125 ||||||||||||||||||||| Sbjct: 489 ccatacattacattacattac 469
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 15858 catacattacattacattaca 15878
>emb|BX571718.9| Zebrafish DNA sequence from clone DKEYP-111A10 in linkage group 14, complete sequence Length = 168697 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaaccaa 227 ||||||||||||||||||||| Sbjct: 79432 atccatccatccatcaaccaa 79412 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 atccatccatccatcaaccaa 227 ||||||||||||||||||||| Sbjct: 79198 atccatccatccatcaaccaa 79178
>emb|AL772141.7| Zebrafish DNA sequence from clone CH211-154O2 in linkage group 18, complete sequence Length = 150428 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 138262 tacattacattacattacaaa 138242
>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2, complete sequence Length = 154030 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tacattacattacattacaaa 128 ||||||||||||||||||||| Sbjct: 147752 tacattacattacattacaaa 147772
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 125599 agcggcagcagcagcagcaac 125579
>emb|CR626311.1| full-length cDNA clone CS0DI022YB13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1041 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>dbj|AK126182.1| Homo sapiens cDNA FLJ44194 fis, clone THYMU2040975, weakly similar to PTB-ASSOCIATED SPLICING FACTOR Length = 2140 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 1025 ggagcggcagcagcagcagca 1045
>dbj|AK125639.1| Homo sapiens cDNA FLJ43651 fis, clone SYNOV4001395 Length = 2759 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 1237 ggagcggcagcagcagcagca 1257
>dbj|AK124880.1| Homo sapiens cDNA FLJ42890 fis, clone BRHIP3008344 Length = 4597 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 2156 ggagcggcagcagcagcagca 2176
>emb|CR620555.1| full-length cDNA clone CS0DI017YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 154 agcggcagcagcagcagcaac 134
>emb|CR620234.1| full-length cDNA clone CS0DI044YI21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1312 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR620138.1| full-length cDNA clone CS0DI057YE03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1328 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 149 agcggcagcagcagcagcaac 129
>emb|CR617446.1| full-length cDNA clone CS0DI023YD09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1341 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 161 agcggcagcagcagcagcaac 141
>emb|CR616612.1| full-length cDNA clone CS0DI003YJ05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1194 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 43 agcggcagcagcagcagcaac 23
>emb|CR616071.1| full-length cDNA clone CS0DD008YA11 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1119 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 278 agcggcagcagcagcagcaac 258
>emb|CR614726.1| full-length cDNA clone CS0DI047YB17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1313 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 132 agcggcagcagcagcagcaac 112
>emb|CR614015.1| full-length cDNA clone CS0DE006YA16 of Placenta of Homo sapiens (human) Length = 1548 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 358 agcggcagcagcagcagcaac 338
>emb|CR613552.1| full-length cDNA clone CS0DI003YE14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1325 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 144 agcggcagcagcagcagcaac 124
>dbj|AK097089.1| Homo sapiens cDNA FLJ39770 fis, clone SPLEN2000882 Length = 2750 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 309 ggagcggcagcagcagcagca 329
>emb|CR612020.1| full-length cDNA clone CS0DI064YB12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR610684.1| full-length cDNA clone CS0DI005YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 166 agcggcagcagcagcagcaac 146
>emb|CR610580.1| full-length cDNA clone CS0DI083YL09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1344 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 161 agcggcagcagcagcagcaac 141
>emb|CR609600.1| full-length cDNA clone CS0DI070YC23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1292 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 137 agcggcagcagcagcagcaac 117
>emb|CR605705.1| full-length cDNA clone CS0DI087YF11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1300 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR603424.1| full-length cDNA clone CS0DI022YB07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1285 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 105 agcggcagcagcagcagcaac 85
>emb|CR602302.1| full-length cDNA clone CS0DI080YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 124 agcggcagcagcagcagcaac 104
>emb|CR601474.1| full-length cDNA clone CS0DI060YD06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 132 agcggcagcagcagcagcaac 112
>emb|CR600702.1| full-length cDNA clone CS0DE006YH08 of Placenta of Homo sapiens (human) Length = 1312 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR600557.1| full-length cDNA clone CS0DI063YM10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1314 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR598974.1| full-length cDNA clone CS0DI041YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 132 agcggcagcagcagcagcaac 112
>gb|AC011398.8| Homo sapiens chromosome 5 clone CTB-25H4, complete sequence Length = 72754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 32197 agcggcagcagcagcagcaac 32177
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 70375 catacattacattacattaca 70355
>emb|CR595571.1| full-length cDNA clone CS0DI001YD11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 137 agcggcagcagcagcagcaac 117
>emb|CR594268.1| full-length cDNA clone CS0DI002YL13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1337 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 137 agcggcagcagcagcagcaac 117
>emb|CR591451.1| full-length cDNA clone CS0DI011YH14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 157 agcggcagcagcagcagcaac 137
>emb|CR590525.1| full-length cDNA clone CS0DI074YG13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1311 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 131 agcggcagcagcagcagcaac 111
>emb|CR590355.1| full-length cDNA clone CS0DI087YP24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 161 agcggcagcagcagcagcaac 141
>emb|CR590334.1| full-length cDNA clone CS0DI041YF01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1277 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 132 agcggcagcagcagcagcaac 112
>gb|DQ409057.1| Latrodectus hesperus major ampullate spidroin 1 (MaSp1) mRNA, partial cds Length = 3317 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 tggagcggcagcagcagcagc 269 ||||||||||||||||||||| Sbjct: 127 tggagcggcagcagcagcagc 147
>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173109 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 25173 agcggcagcagcagcagcaac 25153
>ref|NM_167069.1| Drosophila melanogaster CG15891-RA, transcript variant A (CG15891), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 544 catacattacattacattaca 564
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence Length = 205794 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 75578 agcggcagcagcagcagcaac 75558
>ref|NM_079572.2| Drosophila melanogaster hyperplastic discs CG9484-RA (hyd), mRNA Length = 9074 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 gcggcagcagcagcagcaacg 273 ||||||||||||||||||||| Sbjct: 2221 gcggcagcagcagcagcaacg 2201
>ref|NM_001031869.1| Drosophila melanogaster CG15892-RB, transcript variant B (CG15892), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 544 catacattacattacattaca 564
>ref|NM_001014717.1| Drosophila melanogaster msta CG33548-RA, transcript variant A (msta), mRNA Length = 1759 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 44 agcggcagcagcagcagcaac 24
>dbj|AK148167.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370039L10 product:transforming growth factor, beta receptor II, full insert sequence Length = 3479 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 2173 agcggcagcagcagcagcaac 2193
>dbj|AK159327.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420016D17 product:transforming growth factor, beta receptor II, full insert sequence Length = 4771 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 2228 agcggcagcagcagcagcaac 2248
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 41532 agcggcagcagcagcagcaac 41552
>ref|XM_945367.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 12 (KIAA1949), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 2150 ggagcggcagcagcagcagca 2170
>ref|XM_945366.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 11 (KIAA1949), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 942 ggagcggcagcagcagcagca 962
>ref|XM_941654.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 10 (KIAA1949), mRNA Length = 2841 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 404 ggagcggcagcagcagcagca 424
>ref|XM_936203.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 9 (KIAA1949), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 2150 ggagcggcagcagcagcagca 2170
>ref|XM_936202.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 8 (KIAA1949), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 942 ggagcggcagcagcagcagca 962
>ref|XM_936160.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 7 (KIAA1949), mRNA Length = 2841 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 404 ggagcggcagcagcagcagca 424
>ref|XM_936118.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 6 (KIAA1949), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 2150 ggagcggcagcagcagcagca 2170
>ref|XM_936117.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 5 (KIAA1949), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 942 ggagcggcagcagcagcagca 962
>ref|XM_936086.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 4 (KIAA1949), mRNA Length = 2841 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 404 ggagcggcagcagcagcagca 424
>ref|XM_934039.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 3 (KIAA1949), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 2150 ggagcggcagcagcagcagca 2170
>ref|XM_934035.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 2 (KIAA1949), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 942 ggagcggcagcagcagcagca 962
>ref|XM_929867.1| PREDICTED: Homo sapiens KIAA1949, transcript variant 1 (KIAA1949), mRNA Length = 2841 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ggagcggcagcagcagcagca 270 ||||||||||||||||||||| Sbjct: 404 ggagcggcagcagcagcagca 424
>gb|AY060318.1| Drosophila melanogaster GH18658 full length cDNA Length = 1924 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 catacattacattacattaca 126 ||||||||||||||||||||| Sbjct: 501 catacattacattacattaca 521
>gb|AY044269.1| Homo sapiens CD14 antigen mRNA, partial cds Length = 376 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 41 agcggcagcagcagcagcaac 21
>dbj|AK046561.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430011J22 product:transforming growth factor, beta receptor II, full insert sequence Length = 4702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 2174 agcggcagcagcagcagcaac 2194
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 1371112 agcggcagcagcagcagcaac 1371132 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 cgtcgaggccttcttcgtcgagtt 518 |||||||| ||||||||||||||| Sbjct: 1445221 cgtcgaggtcttcttcgtcgagtt 1445244
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 255551 agcggcagcagcagcagcaac 255571
>gb|AY335646.1| Synthetic construct Homo sapiens ret proto-oncogene (RET) mRNA, partial cds Length = 3219 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcggcagcagcagcagcaac 272 ||||||||||||||||||||| Sbjct: 62 agcggcagcagcagcagcaac 42 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,835,692 Number of Sequences: 3902068 Number of extensions: 6835692 Number of successful extensions: 578531 Number of sequences better than 10.0: 830 Number of HSP's better than 10.0 without gapping: 840 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 562822 Number of HSP's gapped (non-prelim): 15367 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)