ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18o21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463690.1| Oryza sativa (japonica cultivar-group), predic... 432 e-118
2dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 72 2e-09
6gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 ... 68 4e-08
7gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC... 68 4e-08
8gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
10dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
11dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
12gb|AY110218.1| Zea mays CL6853_1 mRNA sequence 60 9e-06
13ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 50 0.009
14ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate de... 50 0.009
15ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehyd... 50 0.009
16gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphat... 50 0.009
17gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphat... 50 0.009
18gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map... 50 0.009
19emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Co... 50 0.009
20emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-... 50 0.009
21dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RI... 46 0.14
22emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chr... 46 0.14
23gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
24emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chro... 44 0.55
25emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on ch... 42 2.2
26gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.2
27dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.2
28gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosom... 40 8.6
29ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
30ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.6
31ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.6
32emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 i... 40 8.6
33ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
34ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
35ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
36gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosom... 40 8.6
37emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chr... 40 8.6
38emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC... 40 8.6
39gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, com... 40 8.6
40gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, com... 40 8.6
41gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complet... 40 8.6
42emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, co... 40 8.6
43gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 8.6
44dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
45gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 8.6
46dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
47gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603... 40 8.6
48emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chr... 40 8.6 
>ref|XM_463690.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1371

 Score =  432 bits (218), Expect = e-118
 Identities = 348/392 (88%)
 Strand = Plus / Minus

                                                                        
Query: 234  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 293
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1358 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1299

                                                                        
Query: 294  ttcatggtttcgtccctcagggcttggaggatgtctctnaccgggagctccctttttatc 353
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1298 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1239

                                                                        
Query: 354  agaattctataaagcctcttcagaattgggcacagttnagcaggagccacttgcttgttt 413
            || |||||||| ||||||||||  || |||||||||| |||||| || |||||||| |||
Sbjct: 1238 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1179

                                                                        
Query: 414  tcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaatgcaccaaca 473
            |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1178 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1119

                                                                        
Query: 474  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 533
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1118 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1059

                                                                        
Query: 534  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 593
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1058 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 999

                                            
Query: 594  gtatcagccagcagagggccggcaagtttctc 625
            |||||||||||||||||||| |||||||||||
Sbjct: 998  gtatcagccagcagagggccagcaagtttctc 967
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>dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E21, full
            insert sequence
          Length = 2080

 Score =  432 bits (218), Expect = e-118
 Identities = 348/392 (88%)
 Strand = Plus / Minus

                                                                        
Query: 234  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 293
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1841 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1782

                                                                        
Query: 294  ttcatggtttcgtccctcagggcttggaggatgtctctnaccgggagctccctttttatc 353
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1781 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1722

                                                                        
Query: 354  agaattctataaagcctcttcagaattgggcacagttnagcaggagccacttgcttgttt 413
            || |||||||| ||||||||||  || |||||||||| |||||| || |||||||| |||
Sbjct: 1721 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1662

                                                                        
Query: 414  tcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaatgcaccaaca 473
            |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1661 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1602

                                                                        
Query: 474  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 533
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1601 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1542

                                                                        
Query: 534  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 593
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1541 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 1482

                                            
Query: 594  gtatcagccagcagagggccggcaagtttctc 625
            |||||||||||||||||||| |||||||||||
Sbjct: 1481 gtatcagccagcagagggccagcaagtttctc 1450
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 129/142 (90%)
 Strand = Plus / Minus

                                                                            
Query: 484      cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 543
                |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 41241157 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 41241098

                                                                            
Query: 544      ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
                ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 41241097 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatcagcca 41241038

                                      
Query: 604      gcagagggccggcaagtttctc 625
                |||||||||| |||||||||||
Sbjct: 41241037 gcagagggccagcaagtttctc 41241016



 Score =  176 bits (89), Expect = 6e-41
 Identities = 130/144 (90%)
 Strand = Plus / Minus

                                                                            
Query: 344      cctttttatcagaattctataaagcctcttcagaattgggcacagttnagcaggagccac 403
                ||||||||| || |||||||| ||||||||||  || |||||||||| |||||| || ||
Sbjct: 41241436 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 41241377

                                                                            
Query: 404      ttgcttgttttcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaa 463
                |||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 41241376 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 41241317

                                        
Query: 464      tgcaccaacagcagaaataccctg 487
                ||||||||||||||| ||||||||
Sbjct: 41241316 tgcaccaacagcagagataccctg 41241293



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 234      aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 293
                |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 41242014 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 41241955

                                          
Query: 294      ttcatggtttcgtccctcagggcttg 319
                ||||||||||| || |||||||||||
Sbjct: 41241954 ttcatggtttcatctctcagggcttg 41241929



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 552      tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
                ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 33946815 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 33946866
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>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score =  178 bits (90), Expect = 1e-41
 Identities = 129/142 (90%)
 Strand = Plus / Minus

                                                                         
Query: 484   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 543
             |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 58072 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 58013

                                                                         
Query: 544   ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
             ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 58012 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatcagcca 57953

                                   
Query: 604   gcagagggccggcaagtttctc 625
             |||||||||| |||||||||||
Sbjct: 57952 gcagagggccagcaagtttctc 57931



 Score =  176 bits (89), Expect = 6e-41
 Identities = 130/144 (90%)
 Strand = Plus / Minus

                                                                         
Query: 344   cctttttatcagaattctataaagcctcttcagaattgggcacagttnagcaggagccac 403
             ||||||||| || |||||||| ||||||||||  || |||||||||| |||||| || ||
Sbjct: 58351 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 58292

                                                                         
Query: 404   ttgcttgttttcctctgggtgtagaacacttaagctgggttgactgagcagctcaaaaaa 463
             |||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 58291 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 58232

                                     
Query: 464   tgcaccaacagcagaaataccctg 487
             ||||||||||||||| ||||||||
Sbjct: 58231 tgcaccaacagcagagataccctg 58208



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 234   aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 293
             |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 58929 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 58870

                                       
Query: 294   ttcatggtttcgtccctcagggcttg 319
             ||||||||||| || |||||||||||
Sbjct: 58869 ttcatggtttcatctctcagggcttg 58844
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>ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT3G07690 mRNA, complete cds
          Length = 1811

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 126/156 (80%)
 Strand = Plus / Minus

                                                                        
Query: 474  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 533
            |||||||  ||||||||||| ||||| |||||||| ||||||||||| || || || |||
Sbjct: 1239 gcagaaaccccctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagt 1180

                                                                        
Query: 534  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 593
            ||||| || || ||  | || || ||||| ||||| |||||||| || |  |||||||| 
Sbjct: 1179 tctccttttgcaagtttctggccgtaccacgcattacgacctttcagtaatgttacatag 1120

                                                
Query: 594  gtatcagccagcagagggccggcaagtttctctggc 629
            ||||| || |||| ||| || || ||||||||||||
Sbjct: 1119 gtatccgcaagcaaaggcccagcgagtttctctggc 1084
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>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
             sequence
          Length = 79296

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                         
Query: 484   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 543
             |||||||||| ||||| |||||||| ||||||||||| || || || |||||||| || |
Sbjct: 44656 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctccttttg 44597

                                                                         
Query: 544   ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
             | ||  | || || ||||| ||||| |||||||| || |  |||||||| ||||| || |
Sbjct: 44596 caagtttctggccgtaccacgcattacgacctttcagtaatgttacataggtatccgcaa 44537

                                       
Query: 604   gcagagggccggcaagtttctctggc 629
             ||| ||| || || ||||||||||||
Sbjct: 44536 gcaaaggcccagcgagtttctctggc 44511
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>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
            complete sequence
          Length = 121054

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 484  cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 543
            |||||||||| ||||| |||||||| ||||||||||| || || || |||||||| || |
Sbjct: 9690 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctccttttg 9631

                                                                        
Query: 544  ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
            | ||  | || || ||||| ||||| |||||||| || |  |||||||| ||||| || |
Sbjct: 9630 caagtttctggccgtaccacgcattacgacctttcagtaatgttacataggtatccgcaa 9571

                                      
Query: 604  gcagagggccggcaagtttctctggc 629
            ||| ||| || || ||||||||||||
Sbjct: 9570 gcaaaggcccagcgagtttctctggc 9545
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
              complete sequence
          Length = 121466

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                          
Query: 552    tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 611
              ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 101453 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 101394

                            
Query: 612    ccggcaagtttctc 625
              ||||||||||||||
Sbjct: 101393 ccggcaagtttctc 101380
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                            
Query: 552      tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 611
                ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 24215215 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 24215156

                              
Query: 612      ccggcaagtttctc 625
                ||||||||||||||
Sbjct: 24215155 ccggcaagtttctc 24215142



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 396     ggagccacttgcttgttttcctctgg 421
               ||||||||||||||||||| ||||||
Sbjct: 6797081 ggagccacttgcttgttttactctgg 6797056
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>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full
            insert sequence
          Length = 2029

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 552  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 611
            ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 1507 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 1448

                          
Query: 612  ccggcaagtttctc 625
            ||||||||||||||
Sbjct: 1447 ccggcaagtttctc 1434
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>dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A13, full
            insert sequence
          Length = 2858

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 552  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 611
            ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 2098 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 2039

                          
Query: 612  ccggcaagtttctc 625
            ||||||||||||||
Sbjct: 2038 ccggcaagtttctc 2025
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>gb|AY110218.1| Zea mays CL6853_1 mRNA sequence
          Length = 1098

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 444 tgactgagcagctcaaaaaatgcaccaacagcagaaataccctgaatcatcccctttcct 503
           ||||| || |||||| |||| ||| |||| ||||| | |||||||||  |||| ||||||
Sbjct: 453 tgactaagaagctcataaaacgcatcaactgcagagacaccctgaatggtcccttttcct 512

                                                                       
Query: 504 ttgatactgtcacccatatcgagcctgagttctcccttcgctagcatttgcccataccat 563
           || |||||||||||||| || |   | | ||| || || |||| | | ||||||||||||
Sbjct: 513 ttaatactgtcacccatttctaatgtcaattcacctttagctaacttctgcccataccat 572

                         
Query: 564 gcattgcgaccttt 577
           ||||| ||||||||
Sbjct: 573 gcattacgaccttt 586
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>ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.1 mRNA, complete
            cds
          Length = 2712

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1228 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1169

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1168 tcagctagcaaaggccctgcaagtttctc 1140
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>ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.3 mRNA, complete
            cds
          Length = 2771

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1324 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1265

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1264 tcagctagcaaaggccctgcaagtttctc 1236
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>ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.2 mRNA, complete
            cds
          Length = 3028

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1544 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1485

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1484 tcagctagcaaaggccctgcaagtttctc 1456
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>gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 1420

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1073 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1014

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1013 tcagctagcaaaggccctgcaagtttctc 985
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>gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 2023

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1482 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1423

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1422 tcagctagcaaaggccctgcaagtttctc 1394
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>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete
             sequence
          Length = 91979

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 537   cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
             ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 28943 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 28884

                                          
Query: 597   tcagccagcagagggccggcaagtttctc 625
             ||||| |||| ||| || |||||||||||
Sbjct: 28883 tcagctagcaaaggccctgcaagtttctc 28855
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>emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS70ZB08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1819

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1258 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1199

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1198 tcagctagcaaaggccctgcaagtttctc 1170
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>emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-3-phosphate dehydrogenase
            (gpdhc gene)
          Length = 1708

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 537  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 596
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1228 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1169

                                         
Query: 597  tcagccagcagagggccggcaagtttctc 625
            ||||| |||| ||| || |||||||||||
Sbjct: 1168 tcagctagcaaaggccctgcaagtttctc 1140
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>dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030004B14 product:inferred:
            myelin basic protein expression factor 2, repressor, full
            insert sequence
          Length = 4367

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 483  ccctgaatcatcccctttccttt 505
            |||||||||||||||||||||||
Sbjct: 3384 ccctgaatcatcccctttccttt 3406
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>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete
              sequence
          Length = 167573

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 483    ccctgaatcatcccctttccttt 505
              |||||||||||||||||||||||
Sbjct: 156674 ccctgaatcatcccctttccttt 156652
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 396   ggagccacttgcttgttttcctctgg 421
             ||||||||||||||||||| ||||||
Sbjct: 28035 ggagccacttgcttgttttactctgg 28010
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>emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chromosome 6 Contains the
            5' end of the AIM1 gene for absent in melanoma 1 and two
            CpG islands, complete sequence
          Length = 53905

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 411  ttttcctctgggtgtagaacacttaa 436
            |||||||||||||||||| |||||||
Sbjct: 6959 ttttcctctgggtgtagatcacttaa 6934
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>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete
             sequence
          Length = 171715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 442   gttgactgagcagctcaaaaa 462
             |||||||||||||||||||||
Sbjct: 77664 gttgactgagcagctcaaaaa 77684
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 304     cgtccctcagggcttggaggatgtc 328
               ||||| |||||||||||||||||||
Sbjct: 5313421 cgtccttcagggcttggaggatgtc 5313445
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 304     cgtccctcagggcttggaggatgtc 328
               ||||| |||||||||||||||||||
Sbjct: 5283435 cgtccttcagggcttggaggatgtc 5283459
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>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete
             sequence
          Length = 199086

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 582   agagttacataagtatcagc 601
             ||||||||||||||||||||
Sbjct: 67445 agagttacataagtatcagc 67426
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>ref|NM_190938.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 552  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
            ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 1055 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 1004
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>ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU04321.1) partial mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  agccgaggtcacggcttccc 232
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (NCU04321.1) partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  agccgaggtcacggcttccc 232
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 in linkage group 7,
            complete sequence
          Length = 135772

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   tccaaatttccaaacacaca 93
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508739.30) partial mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 caaaaaatgcaccaacagca 476
           ||||||||||||||||||||
Sbjct: 207 caaaaaatgcaccaacagca 188
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>ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508739.50) partial mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  caaaaaatgcaccaacagca 476
            ||||||||||||||||||||
Sbjct: 1590 caaaaaatgcaccaacagca 1571
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>ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509135.9) partial mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  caaaaaatgcaccaacagca 476
            ||||||||||||||||||||
Sbjct: 1584 caaaaaatgcaccaacagca 1565
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>gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosome 14, complete
             sequence
          Length = 188421

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 70    ggggtccaaatttccaaacacacaagcc 97
             |||| |||||| ||||||||||||||||
Sbjct: 62668 ggggaccaaatatccaaacacacaagcc 62695
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>emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chromosome 10, complete
              sequence
          Length = 163861

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    agctcaaaaaatgcaccaac 472
              ||||||||||||||||||||
Sbjct: 136041 agctcaaaaaatgcaccaac 136022
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>emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC contig B7H23
          Length = 114377

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   agccgaggtcacggcttccc 232
             ||||||||||||||||||||
Sbjct: 71870 agccgaggtcacggcttccc 71889
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>gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, complete sequence
          Length = 65069

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   gccacttgcttgttttcctc 418
             ||||||||||||||||||||
Sbjct: 59660 gccacttgcttgttttcctc 59679
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>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence
          Length = 167417

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   cctgaatcatcccctttcct 503
             ||||||||||||||||||||
Sbjct: 31174 cctgaatcatcccctttcct 31155
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>gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complete sequence
          Length = 38986

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   gccacttgcttgttttcctc 418
             ||||||||||||||||||||
Sbjct: 34791 gccacttgcttgttttcctc 34810
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>emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, complete sequence
          Length = 152686

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   tccaaatttccaaacacaca 93
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    agccacttgcttgttttcct 417
              ||||||||||||||||||||
Sbjct: 107381 agccacttgcttgttttcct 107362
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 552   tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
             ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 78258 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 78309
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    agccacttgcttgttttcct 417
              ||||||||||||||||||||
Sbjct: 104734 agccacttgcttgttttcct 104753
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>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full
            insert sequence
          Length = 1898

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 552  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 603
            ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 1311 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 1260
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>gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603, complete sequence
          Length = 45617

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 399  gccacttgcttgttttcctc 418
            ||||||||||||||||||||
Sbjct: 1171 gccacttgcttgttttcctc 1190
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>emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chromosome X, complete
             sequence
          Length = 105525

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tttacaatctaatcatgtac 205
             ||||||||||||||||||||
Sbjct: 36032 tttacaatctaatcatgtac 36051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,619,385
Number of Sequences: 3902068
Number of extensions: 4619385
Number of successful extensions: 86782
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 86633
Number of HSP's gapped (non-prelim): 139
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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