ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citra... 200 3e-51
2ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citra... 200 4e-51
3ACLY_RAT (P16638) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate... 199 7e-51
4ACLY_CAEEL (P53585) Probable ATP-citrate synthase (EC 2.3.3.8) (... 192 8e-49
5SUCC1_STRCO (Q9KY56) Succinyl-CoA synthetase beta chain 1 (EC 6.... 35 0.29
6HCP_CHLTE (Q8KBT4) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-... 34 0.49
7SUCC_METTH (O27115) Succinyl-CoA synthetase beta chain (EC 6.2.1... 33 1.1
8TJAP1_MOUSE (Q9DCD5) Tight junction-associated protein 1 (Tight ... 31 4.1
9PGK_DESVH (P62412) Phosphoglycerate kinase (EC 2.7.2.3) 31 4.1
10BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-fo... 31 4.1
11BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-fo... 31 4.1
12CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14) 31 4.1
13PHSH_VICFA (P53537) Alpha-glucan phosphorylase, H isozyme (EC 2.... 30 5.4
14TEAD3_HUMAN (Q99594) Transcriptional enhancer factor TEF-5 (TEA ... 30 9.2
15BCSA_ECOLI (P37653) Cellulose synthase catalytic subunit [UDP-fo... 30 9.2
16BCSA_ECO57 (Q8X5L7) Cellulose synthase catalytic subunit [UDP-fo... 30 9.2
17UL76_HCMVA (P16725) Protein UL76 30 9.2

>ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1091

 Score =  200 bits (509), Expect = 3e-51
 Identities = 97/174 (55%), Positives = 123/174 (70%)
 Frame = -2

Query: 691 PSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 512
           P E+YI +LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EY
Sbjct: 248 PEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEY 307

Query: 511 SGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALREKESK 332
           SGAP E++   YA+ +L   T +     + L+IGG IANFT+VAATF GI+RA+R+ +  
Sbjct: 308 SGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQGP 367

Query: 331 LKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAIDY 170
           LK   V I+VRRGGPNYQ GL  M  +G   G+PI V+G E  MT I   A+ +
Sbjct: 368 LKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGH 421



to top

>ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1101

 Score =  200 bits (508), Expect = 4e-51
 Identities = 100/176 (56%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
 Frame = -2

Query: 691 PSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 512
           P E+YI +LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EY
Sbjct: 248 PEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEY 307

Query: 511 SGAPKEEEVLHYARVVLDCATAD--PDGRKRALLIGGGIANFTDVAATFSGIIRALREKE 338
           SGAP E++   YA+ +L   T +  PDG  + L+IGG IANFT+VAATF GI+RA+R+ +
Sbjct: 308 SGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQ 365

Query: 337 SKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAIDY 170
             LK   V I+VRRGGPNYQ GL  M  +G   G+PI V+G E  MT I   A+ +
Sbjct: 366 GPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGH 421



to top

>ACLY_RAT (P16638) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1100

 Score =  199 bits (506), Expect = 7e-51
 Identities = 100/173 (57%), Positives = 124/173 (71%), Gaps = 2/173 (1%)
 Frame = -2

Query: 691 PSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 512
           P E+YI +LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG  +EL NY EY
Sbjct: 248 PEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEY 307

Query: 511 SGAPKEEEVLHYARVVLDCATAD--PDGRKRALLIGGGIANFTDVAATFSGIIRALREKE 338
           SGAP E++   YA+ +L   T +  PDG  + L+IGG IANFT+VAATF GI+RA+R+ +
Sbjct: 308 SGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDYQ 365

Query: 337 SKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQA 179
             LK   V I+VRRGGPNYQ GL  M  +G   G+PI V+G E  MT I   A
Sbjct: 366 GSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418



to top

>ACLY_CAEEL (P53585) Probable ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1106

 Score =  192 bits (488), Expect = 8e-49
 Identities = 100/177 (56%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
 Frame = -2

Query: 697 LSPSESYIHELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYA 518
           L+  E YI E+D KT ASLK T+LN KGR+WTMVAGGGASV++ DTV DLG ASEL NY 
Sbjct: 257 LTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGGASELANYG 316

Query: 517 EYSGAPKEEEVLHYARVVLDC---ATADPDGRKRALLIGGGIANFTDVAATFSGIIRALR 347
           EYSG P E +   YA+ +L      T  PDG  + L+IGG IANFT+VA TF GI+RA  
Sbjct: 317 EYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLIIGGSIANFTNVAKTFGGIVRAFE 374

Query: 346 EKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAI 176
              SKLK  +V I+VRRGGPNYQ GL +++   ++L LPI V+GPE  MT I   A+
Sbjct: 375 TFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPIHVFGPETHMTAIVGAAL 431



to top

>SUCC1_STRCO (Q9KY56) Succinyl-CoA synthetase beta chain 1 (EC 6.2.1.5)|
           (SCS-beta 1)
          Length = 394

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
 Frame = -2

Query: 598 VAGGGASVIYADTVGDLGYASEL------GNYAEYSGAPKEEEVLHYARVVLDCATADPD 437
           + G GA ++ + T+  + YA E        N+ +  G    + + +   ++L     DPD
Sbjct: 254 IIGNGAGLVMS-TLDVVAYAGEAHGNVKPANFLDIGGGASAQVMANGLEIIL----GDPD 308

Query: 436 GRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAARVNIYVRRGGPNYQTG 272
            R   + + GGI    +VA   +GI++AL+  E + +     + VR  G N + G
Sbjct: 309 VRSVFVNVFGGITACDEVA---NGIVQALKLLEDRGEKVEKPLVVRLDGNNAELG 360



to top

>HCP_CHLTE (Q8KBT4) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 539

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = -2

Query: 565 DTVGDLGYASELGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRK-RALLIGG--GIAN 395
           D V  L   +   + A +SG+ KEE +   A   +D  +ADPD R  ++L++ G  G+A 
Sbjct: 89  DEVRALAGTTPAHDAANWSGSTKEEFLAKAAACSIDSLSADPDLRSLKSLILYGIKGLAA 148

Query: 394 FTDVAA 377
           +TD AA
Sbjct: 149 YTDHAA 154



to top

>SUCC_METTH (O27115) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)|
          Length = 365

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 39/149 (26%), Positives = 60/149 (40%)
 Frame = -2

Query: 670 ELDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPKEE 491
           E++E       F  L+  G I  +  G G ++   D +   G   E   + +  G   E+
Sbjct: 221 EMEEYEPEEFAFVKLD--GDIAVIGNGAGLTLTAMDLIKLNG---EPATFLDIGGGASED 275

Query: 490 EVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAARVN 311
            +    R  LD   + P  R   L + GGI    DVA    G++ ALR+         V 
Sbjct: 276 VI----RRALDLVISHPSVRVVFLNVLGGITRADDVA---RGVVNALRDARRD-----VP 323

Query: 310 IYVRRGGPNYQTGLAKMRALGSELGLPIE 224
           + +R  G N + G   +R    E G+P E
Sbjct: 324 LVIRLTGTNEEEGQRILR----EAGIPFE 348



to top

>TJAP1_MOUSE (Q9DCD5) Tight junction-associated protein 1 (Tight junction|
           protein 4) (Protein incorporated later into tight
           junctions)
          Length = 539

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 23/63 (36%), Positives = 28/63 (44%)
 Frame = +3

Query: 435 PSGSAVAQSKTTLA*CKTSSSLGAPLYSA*FPSSEAYPKSPTVSAYMTLAPPPATIVQMR 614
           PS  A AQ           S+L AP  SA   SSE    +    A++   PPPA +VQ  
Sbjct: 361 PSSPASAQGSPHHQPSPAPSALSAPASSA---SSEEDLLASWQRAFVDRTPPPAAVVQRT 417

Query: 615 PFG 623
            FG
Sbjct: 418 AFG 420



to top

>PGK_DESVH (P62412) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 393

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 421 LLIGGGIANFTDVAATFSGIIRALREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSE 242
           L++GGGIAN    AA +  + ++L E E   +AAR+              +A  RA G E
Sbjct: 211 LIVGGGIANNFIKAAGYE-VGKSLYEPELVEEAARL--------------MAAARAAGGE 255

Query: 241 LGLPIE-VYGPE 209
           + +P++ V GPE
Sbjct: 256 IPVPLDVVVGPE 267



to top

>BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 874

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 30/122 (24%), Positives = 49/122 (40%)
 Frame = -2

Query: 532 LGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRA 353
           LG     S   K+    H   + +  A A  DG     L    + +F+D      G+   
Sbjct: 682 LGGAVAVSVESKQVRRAHRVEIAMPGAIAREDGH----LFSCTVHDFSD-----GGLGIK 732

Query: 352 LREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAID 173
           +  +   L+  +VN+ ++RG   Y      +R  G+E+GL +        M    KQ ID
Sbjct: 733 INGQAQVLEGQKVNLLLKRGQQEYVFPTQVVRVTGNEVGLQL--------MPLTTKQHID 784

Query: 172 YV 167
           +V
Sbjct: 785 FV 786



to top

>BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 874

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 30/122 (24%), Positives = 49/122 (40%)
 Frame = -2

Query: 532 LGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRA 353
           LG     S   K+    H   + +  A A  DG     L    + +F+D      G+   
Sbjct: 682 LGGAVAVSVESKQVRRAHRVEIAMPGAIAREDGH----LFSCTVHDFSD-----GGLGIK 732

Query: 352 LREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAID 173
           +  +   L+  +VN+ ++RG   Y      +R  G+E+GL +        M    KQ ID
Sbjct: 733 INGQAQVLEGQKVNLLLKRGQQEYVFPTQVVRVTGNEVGLQL--------MPLTTKQHID 784

Query: 172 YV 167
           +V
Sbjct: 785 FV 786



to top

>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 583

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -2

Query: 526 NYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIAN--FTDVAA 377
           N+A   G   E  +LH +++  D  T    G+   L +GGG+ +  F+DVA+
Sbjct: 67  NFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVAS 118



to top

>PHSH_VICFA (P53537) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch|
           phosphorylase H)
          Length = 842

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
 Frame = -2

Query: 442 PDGRK----RALLIGG-GIANFTD------VAATFSGIIRALREKESKLKAARVNIYVRR 296
           P+ RK    R ++IGG   A +T+      +      ++ +  E  S LK   V      
Sbjct: 600 PEERKSTTARTVMIGGKAFATYTNAKRIVKLVDDVGSVVNSDPEVNSYLKVVFV------ 653

Query: 295 GGPNYQTGLAKMRALGSELGLPIEVYGPEATMTGICKQAIDYVM 164
             PNY   +A++   GSEL   I   G EA+ T   K A++ V+
Sbjct: 654 --PNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNRVL 695



to top

>TEAD3_HUMAN (Q99594) Transcriptional enhancer factor TEF-5 (TEA domain family|
           member 3) (TEAD-3) (DTEF-1)
          Length = 435

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
 Frame = +3

Query: 318 LAAFNLDSFSLK------ARMMPLNVAATSV---KFAIPPPMRRALFRPSGSAVAQSKTT 470
           + A NLD  S        A M    + + SV   KF+ P P+ +A+F  S S    S   
Sbjct: 109 IKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLPQAVFSTS-SRFWSSPPL 167

Query: 471 LA*CKTSSSLGAPLYSA*FPSSEAYPKSPTVSAYMTLAPPPATIVQMRPFGLRTVNFSDA 650
           L      S    P     +P     P  PT+S+Y  LAP P+    +  +  RT+  S  
Sbjct: 168 LGQQPGPSQDIKPFAQPAYPIQPPLP--PTLSSYEPLAPLPSAAASVPVWQDRTIASSRL 225

Query: 651 LVFSSSSWI 677
            +   S+++
Sbjct: 226 RLLEYSAFM 234



to top

>BCSA_ECOLI (P37653) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 872

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 24/102 (23%), Positives = 42/102 (41%)
 Frame = -2

Query: 532 LGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRA 353
           LG     S   K+    H   + +  A A  DG     L    + +F+D      G+   
Sbjct: 682 LGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGH----LFSCTVQDFSD-----GGLGIK 732

Query: 352 LREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPI 227
           +  +   L+  +VN+ ++RG   Y       R +G+E+GL +
Sbjct: 733 INGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKL 774



to top

>BCSA_ECO57 (Q8X5L7) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 872

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 24/102 (23%), Positives = 42/102 (41%)
 Frame = -2

Query: 532 LGNYAEYSGAPKEEEVLHYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRA 353
           LG     S   K+    H   + +  A A  DG     L    + +F+D      G+   
Sbjct: 682 LGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGH----LFSCTVQDFSD-----GGLGIK 732

Query: 352 LREKESKLKAARVNIYVRRGGPNYQTGLAKMRALGSELGLPI 227
           +  +   L+  +VN+ ++RG   Y       R +G+E+GL +
Sbjct: 733 INGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKL 774



to top

>UL76_HCMVA (P16725) Protein UL76|
          Length = 325

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 385 VAATFSGIIRALREKESKLKAARVNIYVR-RGGPNYQTGLAKMRALG 248
           +AAT   ++R  R K + L  AR +     RGG N + GLA+ RA G
Sbjct: 201 LAATRRRLLRTARGKRAALPRARASAVAGGRGGDNARRGLARGRAHG 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,253,303
Number of Sequences: 219361
Number of extensions: 2347031
Number of successful extensions: 6967
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6960
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top