Clone Name | rbasd19d17 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009616.1| Triticum aestivum clone wre1n.pk0115.e3:fis, full insert mRNA sequence Length = 1345 Score = 902 bits (455), Expect = 0.0 Identities = 637/697 (91%), Gaps = 7/697 (1%) Strand = Plus / Minus Query: 1 aatgataatgatatna-gcattgaggacacataataaaacatatacacaactctggaacg 59 |||||||||||||| | || |||| |||||| ||||||| ||||||| |||||||||| Sbjct: 1304 aatgataatgatatcaagcgttgatgacacacaataaaagatatacatgactctggaaca 1245 Query: 60 atacatatacaatcagcatggccaatataagaaagctttgaaaaacttgtgtagtgacgg 119 |||||||||||| ||||||||| | ||||| |||||||||||||||| |||| | Sbjct: 1244 gtacatatacaat------ggccaatatgacaaagcattgaaaaacttgtgtaatgaccg 1191 Query: 120 ctgttgttcaattgaaatcaaaaattgattattgctaaatacacaggctacagagaccag 179 || ||||| || |||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1190 ctattgtttaactgaaatcaaaaattgattattgctaaatacacaggctatagaggccag 1131 Query: 180 ccggcattgttgattctagtttagaagaccaagattattcgcctcatcacctccttctgt 239 ||||||||| || |||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 1130 ccggcattgatggttctagtttaaaagaccaagattattcgccttatcccctccttctgt 1071 Query: 240 gctggtgagccatcttctcggcatgggccttcctgtcagcatgagctttcctatcggcat 299 |||||||||||||||||||||| ||||||||||||||||| || || ||||| ||||| | Sbjct: 1070 gctggtgagccatcttctcggcgtgggccttcctgtcagcgtgggccttcctgtcggcgt 1011 Query: 300 acatcggaaggctactgatttcattcatctcggccaggagcttgtcttcagtaatattat 359 |||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||| Sbjct: 1010 acattggaaggctactgatctcattcatctcgcccaggagcttgtcttcagtaatgttat 951 Query: 360 ccgtgatgctcctcatcacctttctgtaagtattgatatcattaggagttgatttatctg 419 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 950 ctgtgatgctcctcatcacctttctgtaagtattgatatcattaggagttgatttatctg 891 Query: 420 ctcggatgcgcatgcagaaccagcagtcctcctgtttattccaagagcattcaacaattt 479 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 890 ctcggattcgcatgcagaaccagcagtcctcctgtttattccaagagcactcaacaattt 831 Query: 480 tccctgagaccgaagactgctctacatcctcaggaaatacaattcgggtaccatccataa 539 ||||||| | ||||| |||||||||| |||| |||||| | |||||||||||||||| Sbjct: 830 tccctgatattgaagatggctctacatcatcagcaaataccacccgggtaccatccataa 771 Query: 540 gtttctttttgcctctctcgtacagaaaaaccagctgacggttttcactaccagtctcaa 599 ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 770 gtttctttttgcccctctcatacagaaaaataagctgacggttttcactaccagtctcaa 711 Query: 600 acaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtac 659 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 710 acaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcgtgcgtac 651 Query: 660 gattcacgtatggatcatcccagccctgaaatataag 696 ||||||||||||||||||||||||||||||||||||| Sbjct: 650 gattcacgtatggatcatcccagccctgaaatataag 614
>gb|BT009633.1| Triticum aestivum clone wre1n.pk175.a4:fis, full insert mRNA sequence Length = 1656 Score = 900 bits (454), Expect = 0.0 Identities = 625/681 (91%), Gaps = 7/681 (1%) Strand = Plus / Minus Query: 16 agcattgaggacacataataaaacatatacacaactctggaacgatacatatacaatcag 75 |||||||| |||||| ||||| | ||||||| ||||||||||||| ||| |||||| Sbjct: 1611 agcattgatgacacacaataagagatatacaggactctggaacgatgcatgtacaat--- 1555 Query: 76 catggccaatataagaaagctttgaaaaacttgtgtagtgacggctgttgttcaattgaa 135 ||||||||| | ||||| ||||||||||||||||||||| ||| ||||| ||||||| Sbjct: 1554 ---ggccaatatgacaaagcattgaaaaacttgtgtagtgaccgctattgtttaattgaa 1498 Query: 136 atcaaaaattgattattgctaaatacacaggctacagagaccagccggcattgttgattc 195 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1497 gtcaaaaattgattattgctaaatacacaggctacagtggccagccggcattgttgattc 1438 Query: 196 tagtttagaagaccaagattattcgcctcatcacctccttctgtgctggtgagccatctt 255 ||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 1437 tagttcagaag-ccaagattattcgccttatcccctccttctgtgctggtgagccatctt 1379 Query: 256 ctcggcatgggccttcctgtcagcatgagctttcctatcggcatacatcggaaggctact 315 ||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 1378 ctcggcatgggccttcctgtcagcatgggccttcctgtcggcgtacattggaaggctact 1319 Query: 316 gatttcattcatctcggccaggagcttgtcttcagtaatattatccgtgatgctcctcat 375 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1318 gatctcattcatctcgcccaggagcttgtcttcagtaatgttatccgtgatgctcctcat 1259 Query: 376 cacctttctgtaagtattgatatcattaggagttgatttatctgctcggatgcgcatgca 435 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1258 cacctttctgtaagtattgatatcattaggagttgatttatctgctcggattcgcatgca 1199 Query: 436 gaaccagcagtcctcctgtttattccaagagcattcaacaattttccctgagaccgaaga 495 ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct: 1198 gaaccagcagtcctcctgtttattccaagagcactcaacaattttccctgatattgaaga 1139 Query: 496 ctgctctacatcctcaggaaatacaattcgggtaccatccataagtttctttttgcctct 555 | |||||||| ||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1138 tggatctacatcatcaggaaataccacccgggtaccatccataagtttctttttgcctct 1079 Query: 556 ctcgtacagaaaaaccagctgacggttttcactaccagtctcaaacaaaaagtcaactga 615 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1078 ctcgtacagaaaaataagctggcggttttcactaccagtctcaaacaaaaagtcaactga 1019 Query: 616 attcatctctgggtacttccattttaaaagaccttcatgggtacgattcacgtatggatc 675 ||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||| Sbjct: 1018 attcatctctgggtactcccattttagcagaccttcgtgtgtacgattcacgtatggatc 959 Query: 676 atcccagccctgaaatataag 696 ||||||||| ||||||||||| Sbjct: 958 atcccagccttgaaatataag 938
>dbj|AK100343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082E18, full insert sequence Length = 2581 Score = 351 bits (177), Expect = 2e-93 Identities = 354/413 (85%) Strand = Plus / Minus Query: 284 gctttcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttg 343 ||||||||||| |||||||| |||||| | |||| |||| || || ||||||||||| Sbjct: 2278 gctttcctatcagcatacataggaaggttcatgatctcatatatttcctccaggagcttg 2219 Query: 344 tcttcagtaatattatccgtgatgctcctcatcacctttctgtaagtattgatatcatta 403 ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2218 tcttcagtaatgttatcagtgatgctcctcattacctttctgtaagtattgatatcatta 2159 Query: 404 ggagttgatttatctgctcggatgcgcatgcagaaccagcagtcctcctgtttattccaa 463 |||||||||||||||| ||| |||||||||||| |||| |||||||| | |||||||||| Sbjct: 2158 ggagttgatttatctgttcgaatgcgcatgcaggaccaacagtcctcttctttattccaa 2099 Query: 464 gagcattcaacaattttccctgagaccgaagactgctctacatcctcaggaaatacaatt 523 ||||| ||||||||||||||||| | |||| | | || || || ||||| || || | Sbjct: 2098 gagcactcaacaattttccctgatattgaaggcgggtcaacttcatcagggaacaccacc 2039 Query: 524 cgggtaccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacggttt 583 |||| ||| ||||||||||||||| | |||||||| || || |||| | |||||| || Sbjct: 2038 cgggcaccgtccataagtttctttctacctctctcatagaggaaaatgaactgacgattc 1979 Query: 584 tcactaccagtctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaa 643 ||||| ||| |||| |||| |||||| ||||||||||||||||| || ||||| || ||| Sbjct: 1978 tcactgccaatctcgaacagaaagtctactgaattcatctctggatatttccacttcaaa 1919 Query: 644 agaccttcatgggtacgattcacgtatggatcatcccagccctgaaatataag 696 |||||||||||||||||| ||||||| ||||||||||||||||| |||||||| Sbjct: 1918 agaccttcatgggtacgagtcacgtaaggatcatcccagccctgtaatataag 1866
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 161 bits (81), Expect = 4e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 378 cctttctgtaagtattgatatcattaggagttgatttatctgctcggatgcgcatgcaga 437 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 4763183 cctttctgtaagtattgatatcattaggagttgatttatctgttcgaatgcgcatgcagg 4763242 Query: 438 accagcagtcctcctgtttattccaagagcattcaacaattttccctga 486 |||| |||||||| | ||||||||||||||| ||||||||||||||||| Sbjct: 4763243 accaacagtcctcttctttattccaagagcactcaacaattttccctga 4763291 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 599 aacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggta 658 |||| |||||| ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 4763990 aacagaaagtctactgaattcatctctggatatttccacttcaaaagaccttcatgggta 4764049 Query: 659 cgattcacgtatggatcatcccagccct 686 ||| ||||||| |||||||||||||||| Sbjct: 4764050 cgagtcacgtaaggatcatcccagccct 4764077 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 284 gctttcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttg 343 ||||||||||| |||||||| |||||| | |||| |||| || || ||||||||||| Sbjct: 4762519 gctttcctatcagcatacataggaaggttcatgatctcatatatttcctccaggagcttg 4762578 Query: 344 tcttcagtaatattatccgtgatgctcctcatcacct 380 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 4762579 tcttcagtaatgttatcagtgatgctcctcattacct 4762615
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 161 bits (81), Expect = 4e-36 Identities = 102/109 (93%) Strand = Plus / Plus Query: 378 cctttctgtaagtattgatatcattaggagttgatttatctgctcggatgcgcatgcaga 437 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 4763164 cctttctgtaagtattgatatcattaggagttgatttatctgttcgaatgcgcatgcagg 4763223 Query: 438 accagcagtcctcctgtttattccaagagcattcaacaattttccctga 486 |||| |||||||| | ||||||||||||||| ||||||||||||||||| Sbjct: 4763224 accaacagtcctcttctttattccaagagcactcaacaattttccctga 4763272 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 599 aacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggta 658 |||| |||||| ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 4763971 aacagaaagtctactgaattcatctctggatatttccacttcaaaagaccttcatgggta 4764030 Query: 659 cgattcacgtatggatcatcccagccct 686 ||| ||||||| |||||||||||||||| Sbjct: 4764031 cgagtcacgtaaggatcatcccagccct 4764058 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 284 gctttcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttg 343 ||||||||||| |||||||| |||||| | |||| |||| || || ||||||||||| Sbjct: 4762500 gctttcctatcagcatacataggaaggttcatgatctcatatatttcctccaggagcttg 4762559 Query: 344 tcttcagtaatattatccgtgatgctcctcatcacct 380 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 4762560 tcttcagtaatgttatcagtgatgctcctcattacct 4762596
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161762 Score = 161 bits (81), Expect = 4e-36 Identities = 102/109 (93%) Strand = Plus / Minus Query: 378 cctttctgtaagtattgatatcattaggagttgatttatctgctcggatgcgcatgcaga 437 |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 83948 cctttctgtaagtattgatatcattaggagttgatttatctgttcgaatgcgcatgcagg 83889 Query: 438 accagcagtcctcctgtttattccaagagcattcaacaattttccctga 486 |||| |||||||| | ||||||||||||||| ||||||||||||||||| Sbjct: 83888 accaacagtcctcttctttattccaagagcactcaacaattttccctga 83840 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 599 aacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggta 658 |||| |||||| ||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 83141 aacagaaagtctactgaattcatctctggatatttccacttcaaaagaccttcatgggta 83082 Query: 659 cgattcacgtatggatcatcccagccct 686 ||| ||||||| |||||||||||||||| Sbjct: 83081 cgagtcacgtaaggatcatcccagccct 83054 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 284 gctttcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttg 343 ||||||||||| |||||||| |||||| | |||| |||| || || ||||||||||| Sbjct: 84612 gctttcctatcagcatacataggaaggttcatgatctcatatatttcctccaggagcttg 84553 Query: 344 tcttcagtaatattatccgtgatgctcctcatcacct 380 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 84552 tcttcagtaatgttatcagtgatgctcctcattacct 84516
>dbj|AK100578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105K02, full insert sequence Length = 3594 Score = 153 bits (77), Expect = 9e-34 Identities = 149/173 (86%) Strand = Plus / Minus Query: 524 cgggtaccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacggttt 583 |||| |||||||||||||||||||||||||||||| || || ||||| |||||||| || Sbjct: 2921 cgggaaccatccataagtttctttttgcctctctcataaaggaaaacaagctgacgattg 2862 Query: 584 tcactaccagtctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaa 643 |||| ||| |||||||||||||||||| |||||||| ||||| ||||| || | | Sbjct: 2861 tcacccccaacctcaaacaaaaagtcaacagaattcattgaagggtatttccacttgaga 2802 Query: 644 agaccttcatgggtacgattcacgtatggatcatcccagccctgaaatataag 696 |||||||||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 2801 agaccttcatgggtacgagttacatatggatcatcccagccctgaaaaataag 2749 Score = 113 bits (57), Expect = 8e-22 Identities = 165/201 (82%) Strand = Plus / Minus Query: 288 tcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttgtctt 347 ||||||| ||||||||||| |||| |||| |||| ||||| | || ||||| |||| Sbjct: 3154 tcctatccgcatacatcgggaggcgcgtgatctcatggatctcttctagaagcttctctt 3095 Query: 348 cagtaatattatccgtgatgctcctcatcacctttctgtaagtattgatatcattaggag 407 | || |||||||| |||||||||||||| ||||| | ||| || ||||||||||| |||| Sbjct: 3094 cggtgatattatctgtgatgctcctcattaccttgcggtatgtgttgatatcatttggag 3035 Query: 408 ttgatttatctgctcggatgcgcatgcagaaccagcagtcctcctgtttattccaagagc 467 |||||||||| | || || |||||||||| ||||||| |||| | ||||||||||||| Sbjct: 3034 ttgatttatcagatctaatacgcatgcagacccagcagccctcttccttattccaagagc 2975 Query: 468 attcaacaattttccctgaga 488 | || ||||| ||||||||| Sbjct: 2974 actctacaatcctccctgaga 2954
>gb|AY107824.1| Zea mays PCO130460 mRNA sequence Length = 1000 Score = 125 bits (63), Expect = 2e-25 Identities = 276/347 (79%) Strand = Plus / Minus Query: 350 gtaatattatccgtgatgctcctcatcacctttctgtaagtattgatatcattaggagtt 409 ||||| ||||| ||||| |||||||||||||| | ||| || ||||| || || ||||| Sbjct: 515 gtaatgttatctgtgatactcctcatcaccttccggtatgtgttgatgtcgtttggagta 456 Query: 410 gatttatctgctcggatgcgcatgcagaaccagcagtcctcctgtttattccaagagcat 469 |||||||| | || || ||||| ||| |||| || | || | |||||||| |||||| Sbjct: 455 gatttatcagatctaatacgcatacaggaccaacactgttcttccttattccaggagcat 396 Query: 470 tcaacaattttccctgagaccgaagactgctctacatcctcaggaaatacaattcgggta 529 |||||||| |||| | || || || | |||||||| |||| |||| | || |||| | Sbjct: 395 tcaacaatcctcccggcgatagaggatggatctacatcgtcagtaaatgctatccgggca 336 Query: 530 ccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacggttttcacta 589 |||||||| ||||||||||| |||||||| || || |||||||| ||||| || ||| | Sbjct: 335 ccatccatgagtttcttttttcctctctcataaaggaaaaccagttgacgattatcattc 276 Query: 590 ccagtctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagacct 649 | ||| |||| |||||| || ||||||||||| ||||| ||||| || | |||||| Sbjct: 275 gtaagctcgaacagaaagtccacagaattcatctcagggtatttccacttcaggagacct 216 Query: 650 tcatgggtacgattcacgtatggatcatcccagccctgaaatataag 696 ||||| |||||| | || |||||||| |||||||||||||||||||| Sbjct: 215 tcatgagtacgagttacatatggatcgtcccagccctgaaatataag 169
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 595 ctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatg 654 |||||||||||||||||| |||||||| ||||| ||||| || | |||||||||||| Sbjct: 94608 ctcaaacaaaaagtcaacagaattcattgaagggtatttccacttgagaagaccttcatg 94667 Query: 655 ggtacgattcacgtatggatcatcccagccct 686 ||||||| | || ||||||||||||||||||| Sbjct: 94668 ggtacgagttacatatggatcatcccagccct 94699 Score = 73.8 bits (37), Expect = 7e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 392 ttgatatcattaggagttgatttatctgctcggatgcgcatgcagaaccagcagtcctcc 451 ||||||||||| |||||||||||||| | || || |||||||||| ||||||| |||| Sbjct: 93988 ttgatatcatttggagttgatttatcagatctaatacgcatgcagacccagcagccctct 94047 Query: 452 tgtttattccaagagcattcaacaattttccctgaga 488 | |||||||||||||| || ||||| ||||||||| Sbjct: 94048 tccttattccaagagcactctacaatcctccctgaga 94084 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 524 cgggtaccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacg 579 |||| |||||||||||||||||||||||||||||| || || ||||| |||||||| Sbjct: 94436 cgggaaccatccataagtttctttttgcctctctcataaaggaaaacaagctgacg 94491 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 288 tcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttgtctt 347 ||||||| ||||||||||| |||| |||| |||| ||||| | || ||||| |||| Sbjct: 93502 tcctatccgcatacatcgggaggcgcgtgatctcatggatctcttctagaagcttctctt 93561 Query: 348 cagtaatattatccgtgatgctcctcatcaccttt 382 | || |||||||| |||||||||||||| |||||| Sbjct: 93562 cggtgatattatctgtgatgctcctcattaccttt 93596 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gatatcattaggagttgatttatc 417 ||||||||| |||||||||||||| Sbjct: 84567 gatatcatttggagttgatttatc 84544
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 595 ctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatg 654 |||||||||||||||||| |||||||| ||||| ||||| || | |||||||||||| Sbjct: 6038525 ctcaaacaaaaagtcaacagaattcattgaagggtatttccacttgagaagaccttcatg 6038584 Query: 655 ggtacgattcacgtatggatcatcccagccct 686 ||||||| | || ||||||||||||||||||| Sbjct: 6038585 ggtacgagttacatatggatcatcccagccct 6038616 Score = 73.8 bits (37), Expect = 7e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 392 ttgatatcattaggagttgatttatctgctcggatgcgcatgcagaaccagcagtcctcc 451 ||||||||||| |||||||||||||| | || || |||||||||| ||||||| |||| Sbjct: 6037905 ttgatatcatttggagttgatttatcagatctaatacgcatgcagacccagcagccctct 6037964 Query: 452 tgtttattccaagagcattcaacaattttccctgaga 488 | |||||||||||||| || ||||| ||||||||| Sbjct: 6037965 tccttattccaagagcactctacaatcctccctgaga 6038001 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 524 cgggtaccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacg 579 |||| |||||||||||||||||||||||||||||| || || ||||| |||||||| Sbjct: 6038353 cgggaaccatccataagtttctttttgcctctctcataaaggaaaacaagctgacg 6038408 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 288 tcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttgtctt 347 ||||||| ||||||||||| |||| |||| |||| ||||| | || ||||| |||| Sbjct: 6037419 tcctatccgcatacatcgggaggcgcgtgatctcatggatctcttctagaagcttctctt 6037478 Query: 348 cagtaatattatccgtgatgctcctcatcaccttt 382 | || |||||||| |||||||||||||| |||||| Sbjct: 6037479 cggtgatattatctgtgatgctcctcattaccttt 6037513 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gatatcattaggagttgatttatc 417 ||||||||| |||||||||||||| Sbjct: 6028484 gatatcatttggagttgatttatc 6028461
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 5e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 595 ctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatg 654 |||||||||||||||||| |||||||| ||||| ||||| || | |||||||||||| Sbjct: 6105002 ctcaaacaaaaagtcaacagaattcattgaagggtatttccacttgagaagaccttcatg 6105061 Query: 655 ggtacgattcacgtatggatcatcccagccct 686 ||||||| | || ||||||||||||||||||| Sbjct: 6105062 ggtacgagttacatatggatcatcccagccct 6105093 Score = 73.8 bits (37), Expect = 7e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 392 ttgatatcattaggagttgatttatctgctcggatgcgcatgcagaaccagcagtcctcc 451 ||||||||||| |||||||||||||| | || || |||||||||| ||||||| |||| Sbjct: 6104382 ttgatatcatttggagttgatttatcagatctaatacgcatgcagacccagcagccctct 6104441 Query: 452 tgtttattccaagagcattcaacaattttccctgaga 488 | |||||||||||||| || ||||| ||||||||| Sbjct: 6104442 tccttattccaagagcactctacaatcctccctgaga 6104478 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 524 cgggtaccatccataagtttctttttgcctctctcgtacagaaaaaccagctgacg 579 |||| |||||||||||||||||||||||||||||| || || ||||| |||||||| Sbjct: 6104830 cgggaaccatccataagtttctttttgcctctctcataaaggaaaacaagctgacg 6104885 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 288 tcctatcggcatacatcggaaggctactgatttcattcatctcggccaggagcttgtctt 347 ||||||| ||||||||||| |||| |||| |||| ||||| | || ||||| |||| Sbjct: 6103896 tcctatccgcatacatcgggaggcgcgtgatctcatggatctcttctagaagcttctctt 6103955 Query: 348 cagtaatattatccgtgatgctcctcatcaccttt 382 | || |||||||| |||||||||||||| |||||| Sbjct: 6103956 cggtgatattatctgtgatgctcctcattaccttt 6103990 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gatatcattaggagttgatttatc 417 ||||||||| |||||||||||||| Sbjct: 6094961 gatatcatttggagttgatttatc 6094938
>ref|NM_202534.1| Arabidopsis thaliana mRNA guanylyltransferase/ phosphoprotein phosphatase/ protein tyrosine/serine/threonine phosphatase AT3G09100 transcript variant AT3G09100.2 mRNA, complete cds Length = 2781 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 604 aaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtacgatt 663 ||||||||| || ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1976 aaagtcaaccgagttcatctctggatacttccatttcaacagaccttcatgggtgcgggg 1917 Query: 664 cacgtatggatcatcccagccctgaaa 690 || || |||||||||||||||||||| Sbjct: 1916 aacataaggatcatcccagccctgaaa 1890 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 365 atgctcctcatcacctttctgtaagtattgatatcattaggagttgatttatc 417 ||||| ||||||||||||||| |||| ||||||||||| || ||||||||||| Sbjct: 2215 atgcttctcatcacctttctgaaagtgttgatatcatttggcgttgatttatc 2163
>emb|BX823661.1|CNS0A6NI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1766 Score = 73.8 bits (37), Expect = 7e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 604 aaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtacgatt 663 ||||||||| || ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 984 aaagtcaaccgagttcatctctggatacttccatttcaacagaccttcatgggtgcgggg 925 Query: 664 cacgtatggatcatcccagccctga 688 || || |||||||||||||||||| Sbjct: 924 aacataaggatcatcccagccctga 900 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 365 atgctcctcatcacctttctgtaagtattgatatcattaggagttgatttatc 417 ||||| ||||||||||||||| |||| ||||||||||| || ||||||||||| Sbjct: 1224 atgcttctcatcacctttctgaaagtgttgatatcatttggcgttgatttatc 1172
>gb|BT018740.1| Zea mays clone EL01N0521D04.d mRNA sequence Length = 1584 Score = 71.9 bits (36), Expect = 3e-09 Identities = 177/224 (79%) Strand = Plus / Minus Query: 350 gtaatattatccgtgatgctcctcatcacctttctgtaagtattgatatcattaggagtt 409 ||||| ||||| ||||| |||||||||||||| | ||| || ||||| || || ||||| Sbjct: 1104 gtaatgttatctgtgatactcctcatcaccttccggtatgtgttgatgtcgtttggagta 1045 Query: 410 gatttatctgctcggatgcgcatgcagaaccagcagtcctcctgtttattccaagagcat 469 |||||||| | || || ||||| ||| |||| || | || | |||||||| |||||| Sbjct: 1044 gatttatcagatctaatacgcatacaggaccaacactgttcttccttattccaggagcat 985 Query: 470 tcaacaattttccctgagaccgaagactgctctacatcctcaggaaatacaattcgggta 529 |||||||| |||| | || || || | |||||||| |||| |||| | || |||| | Sbjct: 984 tcaacaatcctcccggcgatagaggatggatctacatcgtcagtaaatgctatccgggca 925 Query: 530 ccatccataagtttctttttgcctctctcgtacagaaaaaccag 573 |||||||| ||||||||||| |||||||| || || |||||||| Sbjct: 924 ccatccatgagtttcttttttcctctctcataaaggaaaaccag 881 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 619 catctctgggtacttccattttaaaagaccttcatgggtacgattcacgtatggatcatc 678 |||||| ||||| ||||| || | ||||||||||| |||||| | || |||||||| || Sbjct: 835 catctcagggtatttccacttcaggagaccttcatgagtacgagttacatatggatcgtc 776 Query: 679 ccagccctgaaatataag 696 |||||||||||||||||| Sbjct: 775 ccagccctgaaatataag 758
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 604 aaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtacgatt 663 ||||||||| || ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 49964 aaagtcaaccgagttcatctctggatacttccatttcaacagaccttcatgggtgcgggg 50023 Query: 664 cacgtatggatcatcccagccctg 687 || || ||||||||||||||||| Sbjct: 50024 aacataaggatcatcccagccctg 50047 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 acctttctgtaagtattgatatcattaggagttgatttatc 417 ||||||||| |||| ||||||||||| || ||||||||||| Sbjct: 49629 acctttctgaaagtgttgatatcatttggcgttgatttatc 49669
>gb|AF257186.1|AF257186 Arabidopsis thaliana defective in exine formation (DEX1) gene, complete cds Length = 7353 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 604 aaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtacgatt 663 ||||||||| || ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 482 aaagtcaaccgagttcatctctggatacttccatttcaacagaccttcatgggtgcgggg 423 Query: 664 cacgtatggatcatcccagccctg 687 || || ||||||||||||||||| Sbjct: 422 aacataaggatcatcccagccctg 399 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 377 acctttctgtaagtattgatatcattaggagttgatttatc 417 ||||||||| |||| ||||||||||| || ||||||||||| Sbjct: 821 acctttctgaaagtgttgatatcatttggcgttgatttatc 781
>emb|BX822227.1|CNS0A72L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 604 aaagtcaactgaattcatctctgggtacttccattttaaaagaccttcatgggtacgatt 663 ||||||||| || ||||||||||| |||||||||| || |||||||||||||| || Sbjct: 287 aaagtcaaccgagttcatctctggatacttccattacaacagaccttcatgggtgcgggg 228 Query: 664 cacgtatggatcatcccagccctgaaa 690 || || |||||||||||||||||||| Sbjct: 227 aacataaggatcatcccagccctgaaa 201 Score = 52.0 bits (26), Expect = 0.003 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 365 atgctcctcatcacctttctgtaagtattgatat-cattaggagttgatttatc 417 ||||| ||||||||||||||| |||| ||||||| |||| || ||||||||||| Sbjct: 528 atgcttctcatcacctttctgaaagtgttgatatacatttggcgttgatttatc 475
>gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete sequence Length = 117139 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ttcaattgaaatcaaaaattga 147 |||||||||||||||||||||| Sbjct: 109546 ttcaattgaaatcaaaaattga 109525
>gb|AC157503.3| Medicago truncatula chromosome 2 BAC clone mte1-58k20, complete sequence Length = 115769 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 ttcaattgaaatcaaaaattga 147 |||||||||||||||||||||| Sbjct: 103374 ttcaattgaaatcaaaaattga 103395
>gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosome 14, complete sequence Length = 154676 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 ctctgggtacttccattttaaaaga 646 |||||| |||||||||||||||||| Sbjct: 18459 ctctggttacttccattttaaaaga 18483
>gb|AF512713.1| Antirrhinum virga DICHOTOMA-like protein (DICH2) gene, partial cds Length = 897 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 tccaagagcattcaacaattt 479 ||||||||||||||||||||| Sbjct: 700 tccaagagcattcaacaattt 720
>gb|AC098862.3| Homo sapiens BAC clone RP11-339D20 from 4, complete sequence Length = 122969 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 tgctctacatcctcaggaaat 517 ||||||||||||||||||||| Sbjct: 12259 tgctctacatcctcaggaaat 12279
>emb|CR376760.1| Pan troglodytes chromosome X BAC PTB-056G20, complete sequence Length = 142982 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 aaacaaaaagtcaactgaatt 618 ||||||||||||||||||||| Sbjct: 72476 aaacaaaaagtcaactgaatt 72456
>emb|AL772280.10| Mouse DNA sequence from clone RP23-97P11 on chromosome 4, complete sequence Length = 152145 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 gaaccagcagtcctcctgttt 456 ||||||||||||||||||||| Sbjct: 85216 gaaccagcagtcctcctgttt 85236
>gb|AC142266.3| Mus musculus BAC clone RP24-380K14 from 14, complete sequence Length = 185704 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 622 ctctgggtacttccattttaaaaga 646 |||||| |||||||||||||||||| Sbjct: 136551 ctctggttacttccattttaaaaga 136575
>gb|AC161882.5| Mus musculus BAC clone RP23-134E24 from chromosome 16, complete sequence Length = 206219 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gatatcattaggagttgattt 414 ||||||||||||||||||||| Sbjct: 68995 gatatcattaggagttgattt 69015
>emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on chromosome 4, complete sequence Length = 209339 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 acacataataaaacatataca 46 ||||||||||||||||||||| Sbjct: 73164 acacataataaaacatataca 73184
>ref|NM_120207.2| Arabidopsis thaliana mRNA guanylyltransferase/ phosphoprotein phosphatase AT5G01290 mRNA, complete cds Length = 2364 Score = 40.1 bits (20), Expect = 9.5 Identities = 80/100 (80%) Strand = Plus / Minus Query: 594 tctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcat 653 ||||| ||| |||||| ||||| ||||| |||| |||||||| || | ||||||| || Sbjct: 1843 tctcatacagaaagtctactgagttcatttctgcatacttccacttcagtagacctttat 1784 Query: 654 gggtacgattcacgtatggatcatcccagccctgaaatat 693 |||| || || || ||||||||||| ||||||||||| Sbjct: 1783 gggttcgtggaacatacggatcatcccaaccctgaaatat 1744
>gb|AC168218.1| Mus musculus BAC clone RP24-236K20 from chromosome 9, complete sequence Length = 168791 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tgattattgctaaatacaca 164 |||||||||||||||||||| Sbjct: 85170 tgattattgctaaatacaca 85189
>gb|AC154305.2| Mus musculus BAC clone RP24-492C11 from chromosome 14, complete sequence Length = 181910 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tgattattgctaaatacaca 164 |||||||||||||||||||| Sbjct: 52961 tgattattgctaaatacaca 52942
>ref|XM_422718.1| PREDICTED: Gallus gallus similar to osteocrin; musclin (LOC424907), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tgatatcattaggagttgat 412 |||||||||||||||||||| Sbjct: 941 tgatatcattaggagttgat 960
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 attgaggacacataataaaa 38 |||||||||||||||||||| Sbjct: 30384 attgaggacacataataaaa 30365
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ataataaaacatatacacaa 49 |||||||||||||||||||| Sbjct: 50735 ataataaaacatatacacaa 50716
>ref|NM_178917.2| Mus musculus arrestin domain containing 3 (Arrdc3), mRNA Length = 4131 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1956 aagaaagctttgaaaaactt 1975
>gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184853 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 agcttgtcttcagtaatatt 357 |||||||||||||||||||| Sbjct: 177640 agcttgtcttcagtaatatt 177659
>gb|AC157218.13| Mus musculus 6 BAC RP24-200A9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173704 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 agcttgtcttcagtaatatt 357 |||||||||||||||||||| Sbjct: 60337 agcttgtcttcagtaatatt 60356
>gb|BC054844.1| Mus musculus arrestin domain containing 3, mRNA (cDNA clone MGC:62675 IMAGE:6493441), complete cds Length = 4102 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1907 aagaaagctttgaaaaactt 1926
>gb|BC031125.1| Mus musculus arrestin domain containing 3, mRNA (cDNA clone IMAGE:4974750), partial cds Length = 3469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1285 aagaaagctttgaaaaactt 1304
>gb|BC023838.1| Mus musculus arrestin domain containing 3, mRNA (cDNA clone IMAGE:5344962), partial cds Length = 3312 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1125 aagaaagctttgaaaaactt 1144
>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence Length = 218508 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gctactgatttcattcatct 329 |||||||||||||||||||| Sbjct: 195540 gctactgatttcattcatct 195521
>emb|AL590989.15| Human DNA sequence from clone RP11-149P14 on chromosome 1 Contains a pseudogene similar to part of cytochrome b, the 5' end of a novel gene and a CpG island, complete sequence Length = 110121 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 667 gtatggatcatcccagccctgaaa 690 |||||||||| ||||||||||||| Sbjct: 76212 gtatggatcagcccagccctgaaa 76235
>emb|AL021068.2|HS206D15 Human DNA sequence from clone RP1-206D15 on chromosome 1q24 Contains the 3' end of the BLZF1 gene for basic leucine zipper nuclear factor 1 (JEM-1), the gene for a novel protein (FLJ25846), a novel gene, the SLC19A2 gene for solute carrier family 19 (thiamine transporter) member 2, an ATP synthase 6 (MTATP6) pseudogene, and a CpG island, complete sequence Length = 101574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 cttccattttaaaagacctt 650 |||||||||||||||||||| Sbjct: 58768 cttccattttaaaagacctt 58787
>gb|BT000440.1| Arabidopsis thaliana mRNA capping enzyme - like protein (At5g01290) mRNA, complete cds Length = 2360 Score = 40.1 bits (20), Expect = 9.5 Identities = 80/100 (80%) Strand = Plus / Minus Query: 594 tctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcat 653 ||||| ||| |||||| ||||| ||||| |||| |||||||| || | ||||||| || Sbjct: 1840 tctcatacagaaagtctactgagttcatttctgcatacttccacttcagtagacctttat 1781 Query: 654 gggtacgattcacgtatggatcatcccagccctgaaatat 693 |||| || || || ||||||||||| ||||||||||| Sbjct: 1780 gggttcgtggaacatacggatcatcccaaccctgaaatat 1741
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ttcaattgaaatcaaaaattgatt 149 |||||| ||||||||||||||||| Sbjct: 1114204 ttcaatagaaatcaaaaattgatt 1114181
>emb|AJ318504.1|AFE318504 Acidithiobacillus ferrooxidans partial petA1 gene for putative Rieske protein Length = 520 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aactctggaacgatacatat 67 |||||||||||||||||||| Sbjct: 330 aactctggaacgatacatat 311
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 243990 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 attaggagttgatttatctg 419 |||||||||||||||||||| Sbjct: 155603 attaggagttgatttatctg 155584
>emb|AL929089.5| Mouse DNA sequence from clone RP24-402O2 on chromosome 11 Contains a novel gene (1700106J16Rik), complete sequence Length = 71354 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 663 tcacgtatggatcatcccag 682 |||||||||||||||||||| Sbjct: 68106 tcacgtatggatcatcccag 68087
>gb|BC098474.1| Mus musculus arrestin domain containing 3, mRNA (cDNA clone MGC:107410 IMAGE:30094818), complete cds Length = 4102 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1901 aagaaagctttgaaaaactt 1920
>gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, complete sequence Length = 170706 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aattgaaatcaaaaattgat 148 |||||||||||||||||||| Sbjct: 145283 aattgaaatcaaaaattgat 145264
>emb|BX323991.10| Zebrafish DNA sequence from clone CH211-66H3 in linkage group 3, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 taaatacacaggctacagagacca 178 ||||||||||| |||||||||||| Sbjct: 95664 taaatacacagactacagagacca 95641
>gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152537 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gaaatcaaaaattgattatt 152 |||||||||||||||||||| Sbjct: 6376 gaaatcaaaaattgattatt 6395
>gb|AC103409.2| Homo sapiens chromosome 8, clone RP11-1107H4, complete sequence Length = 210230 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctcctgtttattccaagagc 467 |||||||||||||||||||| Sbjct: 151789 ctcctgtttattccaagagc 151808
>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence Length = 170536 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 gcctcatcacctccttctgt 239 |||||||||||||||||||| Sbjct: 168235 gcctcatcacctccttctgt 168254
>dbj|AK163364.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020023L07 product:arrestin domain containing 3, full insert sequence Length = 1914 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1452 aagaaagctttgaaaaactt 1471
>ref|XM_940216.1| PREDICTED: Homo sapiens hypothetical protein LOC651094 (LOC651094), mRNA Length = 1921 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gcctcatcacctccttctgt 239 |||||||||||||||||||| Sbjct: 1013 gcctcatcacctccttctgt 994
>ref|XM_928376.1| PREDICTED: Homo sapiens hypothetical protein LOC645342 (LOC645342), mRNA Length = 1921 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gcctcatcacctccttctgt 239 |||||||||||||||||||| Sbjct: 1013 gcctcatcacctccttctgt 994
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 attgaggacacataataaaa 38 |||||||||||||||||||| Sbjct: 160025 attgaggacacataataaaa 160006
>gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185583 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gctactgatttcattcatct 329 |||||||||||||||||||| Sbjct: 142642 gctactgatttcattcatct 142661
>gb|AC091911.3| Homo sapiens chromosome 5 clone RP11-211K15, complete sequence Length = 167553 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aattgaaatcaaaaattgat 148 |||||||||||||||||||| Sbjct: 6439 aattgaaatcaaaaattgat 6420
>emb|CR389564.1| Gallus gallus finished cDNA, clone ChEST861c21 Length = 1347 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tgatatcattaggagttgat 412 |||||||||||||||||||| Sbjct: 954 tgatatcattaggagttgat 973
>dbj|AK084951.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430018M15 product:hypothetical Immunoglobulin structure containing protein, full insert sequence Length = 4131 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1956 aagaaagctttgaaaaactt 1975
>dbj|AK088288.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430010F15 product:hypothetical Immunoglobulin structure containing protein, full insert sequence Length = 4091 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1922 aagaaagctttgaaaaactt 1941
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 attaggagttgatttatctg 419 |||||||||||||||||||| Sbjct: 202086 attaggagttgatttatctg 202105
>emb|CR352395.1| Gallus gallus finished cDNA, clone ChEST83i24 Length = 1336 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tgatatcattaggagttgat 412 |||||||||||||||||||| Sbjct: 941 tgatatcattaggagttgat 960
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttcaattgaaatcaaaaatt 145 |||||||||||||||||||| Sbjct: 105147 ttcaattgaaatcaaaaatt 105166
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttagaagaccaagattatt 218 |||||||||||||||||||| Sbjct: 4476393 tttagaagaccaagattatt 4476412
>gb|AC108009.5| Homo sapiens BAC clone RP13-486L17 from 4, complete sequence Length = 58375 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 taagaaagctttgaaaaact 106 |||||||||||||||||||| Sbjct: 30155 taagaaagctttgaaaaact 30136
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttagaagaccaagattatt 218 |||||||||||||||||||| Sbjct: 71123 tttagaagaccaagattatt 71142
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tttagaagaccaagattatt 218 |||||||||||||||||||| Sbjct: 124074 tttagaagaccaagattatt 124093
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ttgattctagtttagaagac 208 |||||||||||||||||||| Sbjct: 29483 ttgattctagtttagaagac 29502
>gb|AC153382.1| Mus musculus 10 BAC RP23-9F3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206125 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 tgctctacatcctcaggaaa 516 |||||||||||||||||||| Sbjct: 17393 tgctctacatcctcaggaaa 17374
>dbj|AK130458.1| Homo sapiens cDNA FLJ26948 fis, clone RCT08241 Length = 1933 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gcctcatcacctccttctgt 239 |||||||||||||||||||| Sbjct: 1019 gcctcatcacctccttctgt 1000
>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full insert sequence Length = 1538 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gatatcattaggagttgatttatc 417 ||||||||| |||||||||||||| Sbjct: 1354 gatatcatttggagttgatttatc 1331
>emb|AL844512.16| Zebrafish DNA sequence from clone DKEY-8M7, complete sequence Length = 231383 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ataagaaagctttgaaaaac 105 |||||||||||||||||||| Sbjct: 179625 ataagaaagctttgaaaaac 179644
>emb|CT009711.11| Mouse DNA sequence from clone RP23-128L22 on chromosome 13, complete sequence Length = 224715 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 96115 aagaaagctttgaaaaactt 96134
>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete sequence Length = 265215 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttcaattgaaatcaaaaatt 145 |||||||||||||||||||| Sbjct: 70704 ttcaattgaaatcaaaaatt 70723
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones DS08614 and DS00667, complete sequence Length = 100575 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ttcaattgaaatcaaaaatt 145 |||||||||||||||||||| Sbjct: 20092 ttcaattgaaatcaaaaatt 20111
>gb|AC163988.2| Mus musculus chromosome 1, clone RP23-464C12, complete sequence Length = 178004 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gtttagaagaccaagattat 217 |||||||||||||||||||| Sbjct: 132366 gtttagaagaccaagattat 132347
>dbj|AK122499.1| Mus musculus mRNA for mKIAA1376 protein Length = 3924 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1894 aagaaagctttgaaaaactt 1913
>gb|AC174721.1| Gasterosteus aculeatus clone VMRC28-84C14, complete sequence Length = 125967 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 accagctgacggttttcact 588 |||||||||||||||||||| Sbjct: 112164 accagctgacggttttcact 112145
>gb|AC154690.3| Mus musculus BAC clone RP24-331B7 from chromosome 14, complete sequence Length = 181879 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tgattattgctaaatacaca 164 |||||||||||||||||||| Sbjct: 120331 tgattattgctaaatacaca 120312
>emb|BX005189.9| Mouse DNA sequence from clone RP23-170L24 on chromosome X, complete sequence Length = 206372 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gattattgctaaatacacag 165 |||||||||||||||||||| Sbjct: 165072 gattattgctaaatacacag 165053
>gb|BC044762.1| Mus musculus arrestin domain containing 3, mRNA (cDNA clone IMAGE:5359049) Length = 4181 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aagaaagctttgaaaaactt 107 |||||||||||||||||||| Sbjct: 1943 aagaaagctttgaaaaactt 1962
>emb|AJ550897.1|TRU550897 Takifugu rubripes ptr1 gene for parathyroid hormone receptor 1, exons 1-13 Length = 31774 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 cctgtcagcatgagctttcc 290 |||||||||||||||||||| Sbjct: 8624 cctgtcagcatgagctttcc 8605
>gb|BT001162.1| Arabidopsis thaliana mRNA capping enzyme - like protein (At5g01290) mRNA, complete cds Length = 2039 Score = 40.1 bits (20), Expect = 9.5 Identities = 80/100 (80%) Strand = Plus / Minus Query: 594 tctcaaacaaaaagtcaactgaattcatctctgggtacttccattttaaaagaccttcat 653 ||||| ||| |||||| ||||| ||||| |||| |||||||| || | ||||||| || Sbjct: 1630 tctcatacagaaagtctactgagttcatttctgcatacttccacttcagtagacctttat 1571 Query: 654 gggtacgattcacgtatggatcatcccagccctgaaatat 693 |||| || || || ||||||||||| ||||||||||| Sbjct: 1570 gggttcgtggaacatacggatcatcccaaccctgaaatat 1531
>emb|AL845500.6| Mouse DNA sequence from clone RP23-221K3 on chromosome 2, complete sequence Length = 204459 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 636 attttaaaagaccttcatgg 655 |||||||||||||||||||| Sbjct: 193881 attttaaaagaccttcatgg 193862
>emb|AL663113.7| Mouse DNA sequence from clone RP23-207B22 on chromosome X, complete sequence Length = 180424 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 gccttcctgtcagcatgagctttc 289 ||||||||||||| |||||||||| Sbjct: 2355 gccttcctgtcaggatgagctttc 2332
>emb|AL808118.8| Mouse DNA sequence from clone RP23-287O8 on chromosome 4, complete sequence Length = 164068 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ctcctgtttattccaagagc 467 |||||||||||||||||||| Sbjct: 99856 ctcctgtttattccaagagc 99875
>emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chromosome 4, complete sequence Length = 154298 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gatatcattaggagttgatttatc 417 ||||||||||||||||| |||||| Sbjct: 17279 gatatcattaggagttgttttatc 17256 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,705,888 Number of Sequences: 3902068 Number of extensions: 7705888 Number of successful extensions: 150020 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 149500 Number of HSP's gapped (non-prelim): 502 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)