ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19d15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109403.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D04, full insert sequence Length = 1212 Score = 543 bits (274), Expect = e-151 Identities = 427/478 (89%) Strand = Plus / Minus Query: 241 ctaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaa 300 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1004 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 945 Query: 301 attcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgc 360 ||| ||||||||||| |||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 944 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 885 Query: 361 cagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccag 420 | ||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 884 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 825 Query: 421 actaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttat 480 | ||||||||||||||||||| ||| ||||||||||| || ||||| || |||| | Sbjct: 824 gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 765 Query: 481 aatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctc 540 |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 764 aatcaatccatcggtccatttctttttgtgcaagttcagtaacatcttttcctcaagctc 705 Query: 541 atttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgc 600 |||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 704 atttttccggtaattgattgcaattgaatagtagtgcctgttcagcccatgaataagagc 645 Query: 601 ctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggcc 660 |||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 644 ctgaatagatggcttatttaggtgcccaacatttgatgttgtctgtcgtggctcctgacc 585 Query: 661 aagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 |||||||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 584 aagcatcatggtctgagggttaataaggcgaaatgcatcaatgacaactttccccttg 527
>dbj|AK112020.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B06, full insert sequence Length = 1142 Score = 543 bits (274), Expect = e-151 Identities = 427/478 (89%) Strand = Plus / Minus Query: 241 ctaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaa 300 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1002 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 943 Query: 301 attcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgc 360 ||| ||||||||||| |||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 942 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 883 Query: 361 cagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccag 420 | ||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 882 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 823 Query: 421 actaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttat 480 | ||||||||||||||||||| ||| ||||||||||| || ||||| || |||| | Sbjct: 822 gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 763 Query: 481 aatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctc 540 |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 762 aatcaatccatcggtccatttctttttgtgcaagttcagtaacatcttttcctcaagctc 703 Query: 541 atttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgc 600 |||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 702 atttttccggtaattgattgcaattgaatagtagtgcctgttcagcccatgaataagagc 643 Query: 601 ctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggcc 660 |||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 642 ctgaatagatggcttatttaggtgcccaacatttgatgttgtctgtcgtggctcctgacc 583 Query: 661 aagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 |||||||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 582 aagcatcatggtctgagggttaataaggcgaaatgcatcaatgacaactttccccttg 525
>dbj|AK111763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062E06, full insert sequence Length = 1115 Score = 543 bits (274), Expect = e-151 Identities = 427/478 (89%) Strand = Plus / Minus Query: 241 ctaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaa 300 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1001 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 942 Query: 301 attcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgc 360 ||| ||||||||||| |||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 941 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 882 Query: 361 cagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccag 420 | ||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 881 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 822 Query: 421 actaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttat 480 | ||||||||||||||||||| ||| ||||||||||| || ||||| || |||| | Sbjct: 821 gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 762 Query: 481 aatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctc 540 |||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 761 aatcaatccatcggtccatttctttttgtgcaagttcagtaacatcttttcctcaagctc 702 Query: 541 atttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgc 600 |||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| || Sbjct: 701 atttttccggtaattgattgcaattgaatagtagtgcctgttcagcccatgaataagagc 642 Query: 601 ctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggcc 660 |||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 641 ctgaatagatggcttatttaggtgcccaacatttgatgttgtctgtcgtggctcctgacc 582 Query: 661 aagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 |||||||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 581 aagcatcatggtctgagggttaataaggcgaaatgcatcaatgacaactttccccttg 524
>gb|BT009132.1| Triticum aestivum clone wl1n.pk0036.c3:fis, full insert mRNA sequence Length = 1318 Score = 527 bits (266), Expect = e-146 Identities = 425/478 (88%) Strand = Plus / Minus Query: 240 actaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatca 299 |||||||||| || |||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 1017 actaaaagacaaccgtgtcgagcatggttcctagggtctgaactatgtttgatgacatca 958 Query: 300 aattcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattg 359 ||||||| |||||||| ||||| ||||| |||||||| ||||| || ||||||||||| | Sbjct: 957 aattcgacacatgctcttccaaatgcttttttgcatcttgccgacccacatttgctatcg 898 Query: 360 ccagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggcca 419 | ||||||||||| |||||||| |||||||| |||||||||||||| || |||||||| | Sbjct: 897 caagtttctcaggaggcagttcgtcctcctcctgcactgccttgttgtacttgatggcta 838 Query: 420 gactaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttcttta 479 | | ||||||||||| ||||||| ||||||||| || ||||| ||||| || |||| | Sbjct: 837 ggtttagcatttcctggacagtctgctcgttggttttcgagtgagtgtcaaacctcttca 778 Query: 480 taatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagct 539 ||| | |||||| ||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 777 aaattagcccatcggtccatttctttttgtgcaagttcaacagcattttctcctcaagct 718 Query: 540 catttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtg 599 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||| | Sbjct: 717 catttttccggtaattgattgcaattgagtagtagtgtctattcagcccatggataagag 658 Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 657 cctgaatagatggcttatttaggtgcccaacatttgatgttgtctgacgtggctcctggc 598 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttcccctt 717 ||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 597 caagcatcatggtctgaggattaatgaggcggaatgcatcaataaccaccttcccctt 540
>gb|AY104261.1| Zea mays PCO099067 mRNA sequence Length = 1282 Score = 527 bits (266), Expect = e-146 Identities = 425/478 (88%) Strand = Plus / Minus Query: 240 actaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatca 299 |||||||||| || |||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 993 actaaaagacaaccgtgtcgagcatggttcctagggtctgaactatgtttgatgacatca 934 Query: 300 aattcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattg 359 ||||||| |||||||| ||||| ||||| |||||||| ||||| || ||||||||||| | Sbjct: 933 aattcgacacatgctcttccaaatgcttttttgcatcttgccgacccacatttgctatcg 874 Query: 360 ccagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggcca 419 | ||||||||||| |||||||| |||||||| |||||||||||||| || |||||||| | Sbjct: 873 caagtttctcaggaggcagttcgtcctcctcctgcactgccttgttgtacttgatggcta 814 Query: 420 gactaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttcttta 479 | | ||||||||||| ||||||| ||||||||| || ||||| ||||| || |||| | Sbjct: 813 ggtttagcatttcctggacagtctgctcgttggttttcgagtgagtgtcaaacctcttca 754 Query: 480 taatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagct 539 ||| | |||||| ||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct: 753 aaattagcccatcggtccatttctttttgtgcaagttcaacagcattttctcctcaagct 694 Query: 540 catttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtg 599 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||| | Sbjct: 693 catttttccggtaattgattgcaattgagtagtagtgtctattcagcccatggataagag 634 Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 633 cctgaatagatggcttatttaggtgcccaacatttgatgttgtctgacgtggctcctggc 574 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttcccctt 717 ||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 573 caagcatcatggtctgaggattaatgaggcggaatgcatcaataaccaccttcccctt 516
>ref|NM_188020.1| Oryza sativa (japonica cultivar-group), Ozsa8440 predicted mRNA Length = 924 Score = 502 bits (253), Expect = e-139 Identities = 412/465 (88%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 911 gtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgagacatgc 852 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagtttctcaggc 373 || |||||||||||||| ||||||||||| || ||||| || || || ||||||||||| Sbjct: 851 tcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttctcaggt 792 Query: 374 ggcagttcatcctcctcttgcactgccttgttatatttgatggccagactaagcatttcc 433 ||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||| Sbjct: 791 ggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagcatttcc 732 Query: 434 tgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccatct 493 |||||||||| ||| ||||| || || || ||||| || |||| | |||||| ||||| Sbjct: 731 tgaacagtctgctcattggttttcgaatgagtgtcaaaactcttcaaaatcaatccatcg 672 Query: 494 gtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtag 553 ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct: 671 gtccatttctttttgtgtaagttaagcaacattttctcctccagttcatttttgcggtaa 612 Query: 554 ttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggt 613 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 611 ttgattgcaatggagtagtagtgtctgttcagcccgtgaataagagcctggatagatggt 552 Query: 614 ttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatcatggtc 673 |||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 551 ttgtttagatgcccaacatttgatgttgtctgtcgcggttcctggccaagcatcatggtc 492 Query: 674 tgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 491 tgaggattaatgagacgaaatgcatcaatgaccaccttccccttg 447
>dbj|AK099455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022M19, full insert sequence Length = 1220 Score = 502 bits (253), Expect = e-139 Identities = 412/465 (88%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 997 gtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgagacatgc 938 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagtttctcaggc 373 || |||||||||||||| ||||||||||| || ||||| || || || ||||||||||| Sbjct: 937 tcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttctcaggt 878 Query: 374 ggcagttcatcctcctcttgcactgccttgttatatttgatggccagactaagcatttcc 433 ||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||| Sbjct: 877 ggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagcatttcc 818 Query: 434 tgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccatct 493 |||||||||| ||| ||||| || || || ||||| || |||| | |||||| ||||| Sbjct: 817 tgaacagtctgctcattggttttcgaatgagtgtcaaaactcttcaaaatcaatccatcg 758 Query: 494 gtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtag 553 ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct: 757 gtccatttctttttgtgtaagttaagcaacattttctcctccagttcatttttgcggtaa 698 Query: 554 ttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggt 613 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 697 ttgattgcaatggagtagtagtgtctgttcagcccgtgaataagagcctggatagatggt 638 Query: 614 ttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatcatggtc 673 |||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 637 ttgtttagatgcccaacatttgatgttgtctgtcgcggttcctggccaagcatcatggtc 578 Query: 674 tgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 577 tgaggattaatgagacgaaatgcatcaatgaccaccttccccttg 533
>dbj|AB037152.1| Oryza sativa (japonica cultivar-group) OsRPN11 mRNA for 26S proteasome regulatory particle non-ATPase subunit11, complete cds Length = 1129 Score = 502 bits (253), Expect = e-139 Identities = 412/465 (88%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 950 gtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgagacatgc 891 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagtttctcaggc 373 || |||||||||||||| ||||||||||| || ||||| || || || ||||||||||| Sbjct: 890 tcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttctcaggt 831 Query: 374 ggcagttcatcctcctcttgcactgccttgttatatttgatggccagactaagcatttcc 433 ||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||| Sbjct: 830 ggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagcatttcc 771 Query: 434 tgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccatct 493 |||||||||| ||| ||||| || || || ||||| || |||| | |||||| ||||| Sbjct: 770 tgaacagtctgctcattggttttcgaatgagtgtcaaaactcttcaaaatcaatccatcg 711 Query: 494 gtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtag 553 ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct: 710 gtccatttctttttgtgtaagttaagcaacattttctcctccagttcatttttgcggtaa 651 Query: 554 ttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggt 613 ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 650 ttgattgcaatggagtagtagtgtctgttcagcccgtgaataagagcctggatagatggt 591 Query: 614 ttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatcatggtc 673 |||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 590 ttgtttagatgcccaacatttgatgttgtctgtcgcggttcctggccaagcatcatggtc 531 Query: 674 tgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 530 tgaggattaatgagacgaaatgcatcaatgaccaccttccccttg 486
>gb|BT018364.1| Zea mays clone EL01N0311E01.c mRNA sequence Length = 603 Score = 478 bits (241), Expect = e-131 Identities = 407/461 (88%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 240 actaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatca 299 ||||||| || || |||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 468 actaaaatacaaccgtgtcgagcatggttcctagggtctgaactatgtttgatgacatca 409 Query: 300 aattcgagacatgctcctccaagtgcttctttgcatc-ctgccgcccgacatttgctatt 358 |||| || |||||||| ||||| ||||| |||||||| | |||| || ||||||||||| Sbjct: 408 aattggacacatgctcttccaaatgcttttttgcatctccgccgacccacatttgctata 349 Query: 359 gccagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggcc 418 || ||||||||||| |||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 348 gcaagtttctcaggtggcagttcgtcctcctcctgcactgccttgttgtacttgatggct 289 Query: 419 agactaagcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttcttt 478 || | ||||||||||| ||||||| ||||||||| |||||||| ||||| || |||| Sbjct: 288 aggtttagcatttcctggacagtctgctcgttggtttttgagtgagtgtcaaacctcttc 229 Query: 479 ataatcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagc 538 | ||| | ||||||||||||||||||||||||||||||| |||||| |||||||| ||| Sbjct: 228 aaaattagtccatctgtccatttctttttgtgcaagttcaacaacattttctcctctagc 169 Query: 539 tcatttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagt 598 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 168 tcatttttccggtaattgattgcaattgagtagtagtgcctgttcagcccatggataaga 109 Query: 599 gcctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctgg 658 |||||||| ||||| || ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 108 gcctgaatcgatggcttatttaggtgcccaacatttgatgtcgtctgccgtggctcctga 49 Query: 659 ccaagcatcatggtctgagggttaatgagacggaatgcatc 699 |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 48 ccaagcatcatggtctgaggattaattaggcggaatgcatc 8
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Minus Query: 432 cctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccat 491 |||||||||||| ||| ||||||||||| || ||||| || |||| | |||||| |||| Sbjct: 105689 cctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcagaatcaatccat 105630 Query: 492 ctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggt 551 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105629 cggtccatttctttttgtgcaagttcagtaacatcttttcctcaagctcatttttccggt 105570 Query: 552 agttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 | ||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 105569 aattgattgcaattgaatagtagtgcctgttcagcccatgaataagagcctga 105517 Score = 188 bits (95), Expect = 2e-44 Identities = 170/195 (87%) Strand = Plus / Minus Query: 241 ctaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaa 300 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 105977 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 105918 Query: 301 attcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgc 360 ||| ||||||||||| |||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 105917 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 105858 Query: 361 cagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccag 420 | ||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 105857 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 105798 Query: 421 actaagcatttcctg 435 | ||||||||||| Sbjct: 105797 gttcagcatttcctg 105783 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 105435 cctgaatagatggcttatttaggtgcccaacatttgatgttgtctgtcgtggctcctgac 105376 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||||||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 105375 caagcatcatggtctgagggttaataaggcgaaatgcatcaatgacaactttccccttg 105317
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 208 bits (105), Expect = 2e-50 Identities = 156/173 (90%) Strand = Plus / Minus Query: 432 cctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccat 491 |||||||||||| ||| ||||||||||| || ||||| || |||| | |||||| |||| Sbjct: 17728931 cctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcagaatcaatccat 17728872 Query: 492 ctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggt 551 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 17728871 cggtccatttctttttgtgcaagttcagtaacatcttttcctcaagctcatttttccggt 17728812 Query: 552 agttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 | ||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 17728811 aattgattgcaattgaatagtagtgcctgttcagcccatgaataagagcctga 17728759 Score = 188 bits (95), Expect = 2e-44 Identities = 170/195 (87%) Strand = Plus / Minus Query: 241 ctaaaagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaa 300 |||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 17729219 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 17729160 Query: 301 attcgagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgc 360 ||| ||||||||||| |||||||||||||| ||||| ||||| || ||||||||||| || Sbjct: 17729159 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 17729100 Query: 361 cagtttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccag 420 | ||||||||||||||| ||||||||||||||||| |||||||| || ||||| || || Sbjct: 17729099 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 17729040 Query: 421 actaagcatttcctg 435 | ||||||||||| Sbjct: 17729039 gttcagcatttcctg 17729025 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 17728677 cctgaatagatggcttatttaggtgcccaacatttgatgttgtctgtcgtggctcctgac 17728618 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||||||||||||||||||||||| || || |||||||||||||| |||||||||||| Sbjct: 17728617 caagcatcatggtctgagggttaataaggcgaaatgcatcaatgacaactttccccttg 17728559
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 202 bits (102), Expect = 1e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 9168644 gtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgagacatgc 9168585 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagtttctcaggc 373 || |||||||||||||| ||||||||||| || ||||| || || || ||||||||||| Sbjct: 9168584 tcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttctcaggt 9168525 Query: 374 ggcagttcatcctcctcttgcactgccttgttatatttgatggccagactaagcatttcc 433 ||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||| Sbjct: 9168524 ggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagcatttcc 9168465 Query: 434 tg 435 || Sbjct: 9168464 tg 9168463 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 |||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||||||| Sbjct: 9168084 cctggatagatggtttgtttagatgcccaacatttgatgttgtctgtcgcggttcctggc 9168025 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9168024 caagcatcatggtctgaggattaatgagacgaaatgcatcaatgaccaccttccccttg 9167966 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 432 cctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccat 491 |||||||||||| ||| ||||| || || || ||||| || |||| | |||||| |||| Sbjct: 9168342 cctgaacagtctgctcattggttttcgaatgagtgtcaaaactcttcaaaatcaatccat 9168283 Query: 492 ctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggt 551 | ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| |||| Sbjct: 9168282 cggtccatttctttttgtgtaagttaagcaacattttctcctccagttcatttttgcggt 9168223 Query: 552 agttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcct 602 | ||||||||||| ||||||||||| ||||||||||| |||||||| |||| Sbjct: 9168222 aattgattgcaatggagtagtagtgtctgttcagcccgtgaataagagcct 9168172
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 202 bits (102), Expect = 1e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| ||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct: 69026 gtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgagacatgc 68967 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagtttctcaggc 373 || |||||||||||||| ||||||||||| || ||||| || || || ||||||||||| Sbjct: 68966 tcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttctcaggt 68907 Query: 374 ggcagttcatcctcctcttgcactgccttgttatatttgatggccagactaagcatttcc 433 ||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||| Sbjct: 68906 ggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagcatttcc 68847 Query: 434 tg 435 || Sbjct: 68846 tg 68845 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 |||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||||||| Sbjct: 68466 cctggatagatggtttgtttagatgcccaacatttgatgttgtctgtcgcggttcctggc 68407 Query: 660 caagcatcatggtctgagggttaatgagacggaatgcatcaatgaccactttccccttg 718 ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 68406 caagcatcatggtctgaggattaatgagacgaaatgcatcaatgaccaccttccccttg 68348 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 432 cctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatcaacccat 491 |||||||||||| ||| ||||| || || || ||||| || |||| | |||||| |||| Sbjct: 68724 cctgaacagtctgctcattggttttcgaatgagtgtcaaaactcttcaaaatcaatccat 68665 Query: 492 ctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggt 551 | ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| |||| Sbjct: 68664 cggtccatttctttttgtgtaagttaagcaacattttctcctccagttcatttttgcggt 68605 Query: 552 agttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcct 602 | ||||||||||| ||||||||||| ||||||||||| |||||||| |||| Sbjct: 68604 aattgattgcaatggagtagtagtgtctgttcagcccgtgaataagagcct 68554
>emb|AM260494.1| Platanus acerifolia partial mRNA for 26S proteasome subunit 11 (26S-11 gene) Length = 846 Score = 190 bits (96), Expect = 4e-45 Identities = 192/224 (85%) Strand = Plus / Minus Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 |||||||| ||||| ||||||||||| | |||||| ||||| ||||||||||| ||||| Sbjct: 450 aacccatcagtccacttctttttgtgtaggttcagtaacattttctcctcaagttcattc 391 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 || | |||||| || ||||||||||| || |||||||||| |||||| || | |||||| Sbjct: 390 tttctgtagttaatcgcaatagagtaataatgcctgttcaacccatggatcaaagcctga 331 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| || ||||||||||| |||||||||||||||||||| |||||| || Sbjct: 330 atggatggtttgttcagatgcccaacattggatgttgtctgccgtggctcttggccaggc 271 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 |||||||| || |||||||| | ||||| |||||||| ||||| Sbjct: 270 atcatggtttgtgggttaatcaatcggaaggcatcaataaccac 227 Score = 133 bits (67), Expect = 9e-28 Identities = 142/167 (85%) Strand = Plus / Minus Query: 275 gtctggactatgttcgatgacatcaaattcgagacatgctcctccaagtgcttctttgca 334 ||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||| ||| Sbjct: 660 gtctgaactatgtttgatgacatcaagttagagacatgttcttccaaatgcttcttagca 601 Query: 335 tcctgccgcccgacatttgctattgccagtttctcaggcggcagttcatcctcctcttgc 394 || |||| || || ||||| |||||||| |||||||| |||| |||||||| || || Sbjct: 600 tcttgcctgcccacgtttgcaattgccagcttctcaggtggcaactcatcctcttcctga 541 Query: 395 actgccttgttatatttgatggccagactaagcatttcctgaacagt 441 ||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 540 actgccttgttgtatttgatggctagactcagcatctcctgaacagt 494
>ref|NM_122261.2| Arabidopsis thaliana unknown protein AT5G23540 mRNA, complete cds Length = 1266 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 1026 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 967 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 966 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 907 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 906 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 847 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 846 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 787 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 786 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 727 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 726 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 667 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 666 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 607 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 606 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 563
>gb|AY230845.1| Arabidopsis thaliana 26S proteasome subunit RPN11 (RPN11) mRNA, RPN11-2 allele, complete cds Length = 1199 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 989 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 930 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 929 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 870 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 869 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 810 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 809 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 750 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 749 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 690 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 689 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 630 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 629 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 570 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 569 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 526
>gb|AY230844.1| Arabidopsis thaliana 26S proteasome subunit RPN11a (RPN11a) mRNA, RPN11a-1 allele, complete cds Length = 1163 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 980 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 921 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 920 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 861 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 860 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 801 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 800 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 741 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 740 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 681 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 680 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 621 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 620 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 561 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 560 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 517
>gb|AY230843.1| Arabidopsis thaliana 26S proteasome subunit RPN11A (RPN11a) mRNA, RPN11a-1 allele, complete cds Length = 1235 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 1013 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 954 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 953 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 894 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 893 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 834 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 833 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 774 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 773 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 714 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 713 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 654 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 653 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 594 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 593 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 550
>gb|AY091329.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory subunit (At5g23540) mRNA, complete cds Length = 958 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 923 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 864 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 863 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 804 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 803 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 744 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 743 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 684 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 683 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 624 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 623 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 564 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 563 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 504 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 503 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 460
>gb|AY070073.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory subunit (At5g23540) mRNA, complete cds Length = 1227 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 969 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 910 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 909 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 850 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 849 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 790 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 789 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 730 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 729 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 670 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 669 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 610 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||| Sbjct: 609 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagc 550 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 549 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 506
>gb|AY086277.1| Arabidopsis thaliana clone 23276 mRNA, complete sequence Length = 1185 Score = 159 bits (80), Expect = 2e-35 Identities = 368/464 (79%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 1029 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 970 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 969 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 910 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatatttgatggccagacta 424 ||||| || | || || ||||||||||| || |||||||||||||| |||| || Sbjct: 909 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatatttagcagccaagctc 850 Query: 425 agcatttcctgaacagtctcctcgttggtctttgagtgggtgtcgaatttctttataatc 484 | ||| ||||| || |||| ||||||||||| ||||||||||| || ||| || Sbjct: 849 aacatctcctggaccgtctgttcgttggtcttggagtgggtgtcaaagcgtcttagcgtc 790 Query: 485 aacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcattt 544 | ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || Sbjct: 789 agaccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttc 730 Query: 545 ttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctga 604 |||| ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| Sbjct: 729 ttcctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctgg 670 Query: 605 atagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagc 664 || ||||||||||| | |||||||| ||||||||||| || || || || || |||||| Sbjct: 669 atcgatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcgtgcccaagc 610 Query: 665 atcatggtctgagggttaatgagacggaatgcatcaatgaccac 708 || |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 609 ataatggtctgtggatttatggagcggaacgcatcaatcaccac 566
>emb|BX830953.1|CNS09YRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 898 Score = 137 bits (69), Expect = 6e-29 Identities = 183/221 (82%) Strand = Plus / Minus Query: 488 ccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttc 547 ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || ||| Sbjct: 720 ccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttcttc 661 Query: 548 cggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaata 607 | ||||||||||| || ||||| ||||| ||||||| ||| ||||| | ||||| || Sbjct: 660 ctatagttgattgctattgagtaatagtgtctgttcaacccgtgaatcaaagcctggatc 601 Query: 608 gatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatc 667 ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||||| Sbjct: 600 gatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagcata 541 Query: 668 atggtctgagggttaatgagacggaatgcatcaatgaccac 708 |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 540 atggtctgtggatttatggagcggaacgcatcaatcaccac 500
>gb|BT013130.1| Lycopersicon esculentum clone 114422R, mRNA sequence Length = 1181 Score = 123 bits (62), Expect = 8e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 488 ccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttc 547 ||||||||||||||||| ||||| | ||||| | ||||||||| ||||| ||||| || Sbjct: 757 ccatctgtccatttcttcttgtgaagattcagtagcatcttctcttcaagttcattcttt 698 Query: 548 cggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaata 607 | |||||| || || || ||||||||||| ||||||| ||||| || | ||| |||||| Sbjct: 697 ctgtagtttatggctattgagtagtagtgtctgttcaaaccatggatcaatgcttgaata 638 Query: 608 gatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatc 667 ||||||||||| || || || | ||| ||||||||||| |||||||| |||||||||||| Sbjct: 637 gatggtttgttcagatgtcccagatttgatgttgtctgacgtggctcttggccaagcatc 578 Query: 668 at 669 || Sbjct: 577 at 576 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 254 gtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattcgagacatgc 313 |||||||||||||| || | |||||||| ||||| || |||||||||| |||||||| Sbjct: 991 gtgtcgagcatggttcccaatgtctggacaatgtttgaagacatcaaatcagagacatgt 932 Query: 314 tcctccaagtgcttctttgcatcctgccgcccgacatttgc 354 || || | |||||||||||||| |||| || |||||||| Sbjct: 931 tcttcaagatgcttctttgcatcttgccttcctacatttgc 891
>gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete sequence Length = 123189 Score = 97.6 bits (49), Expect = 5e-17 Identities = 109/129 (84%) Strand = Plus / Minus Query: 284 atgttcgatgacatcaaattcgagacatgctcctccaagtgcttctttgcatcctgccgc 343 ||||| || ||||||||||| ||||||||||| || | ||||||||| ||||| || | Sbjct: 49627 atgttagaagacatcaaatttgagacatgctcttcgaggtgcttcttggcatcttgtctt 49568 Query: 344 ccgacatttgctattgccagtttctcaggcggcagttcatcctcctcttgcactgccttg 403 || |||||||||||||| ||||||||||| | ||| ||||| |||||||| || |||||| Sbjct: 49567 ccaacatttgctattgcaagtttctcaggtgtcagctcatcttcctcttgaacagccttg 49508 Query: 404 ttatatttg 412 || |||||| Sbjct: 49507 ttgtatttg 49499 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 483 tcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcat 542 |||| ||||| ||||||||||||||||| | || |||| |||||||||||| || |||| Sbjct: 49136 tcaagccatcagtccatttctttttgtgaagattaagcagcatcttctcctcgagttcat 49077 Query: 543 ttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatg 591 | |||| ||| ||||| || || || || || |||| ||||| |||||| Sbjct: 49076 tcttcctgtaattgatggctatggaataataatgccggttcaacccatg 49028 Score = 40.1 bits (20), Expect = 9.8 Identities = 62/76 (81%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||| |||||||| || || || || | ||| || |||||||||| ||| || || | Sbjct: 48910 cctgaatggatggtttattcagatgtcccagattggaagttgtctgccttggttcttgtc 48851 Query: 660 caagcatcatggtctg 675 |||||||||| ||||| Sbjct: 48850 caagcatcattgtctg 48835
>gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete sequence Length = 108548 Score = 97.6 bits (49), Expect = 5e-17 Identities = 109/129 (84%) Strand = Plus / Minus Query: 284 atgttcgatgacatcaaattcgagacatgctcctccaagtgcttctttgcatcctgccgc 343 ||||| || ||||||||||| ||||||||||| || | ||||||||| ||||| || | Sbjct: 8410 atgttagaagacatcaaatttgagacatgctcttcgaggtgcttcttggcatcttgtctt 8351 Query: 344 ccgacatttgctattgccagtttctcaggcggcagttcatcctcctcttgcactgccttg 403 || |||||||||||||| ||||||||||| | ||| ||||| |||||||| || |||||| Sbjct: 8350 ccaacatttgctattgcaagtttctcaggtgtcagctcatcttcctcttgaacagccttg 8291 Query: 404 ttatatttg 412 || |||||| Sbjct: 8290 ttgtatttg 8282 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 483 tcaacccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcat 542 |||| ||||| ||||||||||||||||| | || |||| |||||||||||| || |||| Sbjct: 7919 tcaagccatcagtccatttctttttgtgaagattaagcagcatcttctcctcgagttcat 7860 Query: 543 ttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatg 591 | |||| ||| ||||| || || || || || |||| ||||| |||||| Sbjct: 7859 tcttcctgtaattgatggctatggaataataatgccggttcaacccatg 7811 Score = 40.1 bits (20), Expect = 9.8 Identities = 62/76 (81%) Strand = Plus / Minus Query: 600 cctgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggc 659 ||||||| |||||||| || || || || | ||| || |||||||||| ||| || || | Sbjct: 7693 cctgaatggatggtttattcagatgtcccagattggaagttgtctgccttggttcttgtc 7634 Query: 660 caagcatcatggtctg 675 |||||||||| ||||| Sbjct: 7633 caagcatcattgtctg 7618
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 93.7 bits (47), Expect = 8e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 488 ccatctgtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatttttc 547 ||||||||||||||||| ||||| | ||| || |||||||||||||||||||| || ||| Sbjct: 18055 ccatctgtccatttcttcttgtggaggttgagtaacatcttctcctcaagctcgttcttc 17996 Query: 548 cggtagttgattgcaatagagtagtagtgcctgttcagcccatgaat 594 | ||||||||||| || ||||| ||||| ||||||| ||| ||||| Sbjct: 17995 ctatagttgattgctattgagtaatagtgtctgttcaacccgtgaat 17949 Score = 77.8 bits (39), Expect = 5e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 18386 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 18327 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 18326 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 18267 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatattt 411 ||||| || | || || ||||||||||| || |||||||||||||| Sbjct: 18266 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatattt 18220 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 608 gatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatc 667 ||||||||||| | |||||||| ||||||||||| || || || ||||| |||||||| Sbjct: 17844 gatggtttgttcaagtgcccaaggttcgatgttgtttgacggggttcctgcccaagcata 17785 Query: 668 atggtctgagggttaatgagacggaatgcatcaatgaccac 708 |||||||| || || ||| ||||| |||||||| ||||| Sbjct: 17784 atggtctgtggatttatggagcggaacgcatcaatcaccac 17744
>emb|CT025430.2| Xenopus tropicalis finished cDNA, clone TGas117j07 Length = 1734 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 501 tctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattg 560 ||||||| ||||| |||| || |||||||| ||||| |||||||| | ||| ||||| | Sbjct: 735 tctttttatgcaaattcaacagcatcttctgttcaagttcattttttctgtaattgatag 676 Query: 561 caatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct: 675 ttatggagtagtaatgcctgttaagaccatgaataagagcctgtatagatggtttgttta 616 Query: 621 ggtgcccaa 629 ||||||| Sbjct: 615 aatgcccaa 607
>gb|BC091596.1| Xenopus tropicalis MGC97603 protein, mRNA (cDNA clone MGC:97603 IMAGE:6978091), complete cds Length = 1717 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 501 tctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattg 560 ||||||| ||||| |||| || |||||||| ||||| |||||||| | ||| ||||| | Sbjct: 703 tctttttatgcaaattcaacagcatcttctgttcaagttcattttttctgtaattgatag 644 Query: 561 caatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct: 643 ttatggagtagtaatgcctgttaagaccatgaataagagcctgtatagatggtttgttta 584 Query: 621 ggtgcccaa 629 ||||||| Sbjct: 583 aatgcccaa 575
>ref|NM_001030465.1| Xenopus tropicalis MGC97603 protein (MGC97603), mRNA Length = 1717 Score = 89.7 bits (45), Expect = 1e-14 Identities = 108/129 (83%) Strand = Plus / Minus Query: 501 tctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattg 560 ||||||| ||||| |||| || |||||||| ||||| |||||||| | ||| ||||| | Sbjct: 703 tctttttatgcaaattcaacagcatcttctgttcaagttcattttttctgtaattgatag 644 Query: 561 caatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||||| Sbjct: 643 ttatggagtagtaatgcctgttaagaccatgaataagagcctgtatagatggtttgttta 584 Query: 621 ggtgcccaa 629 ||||||| Sbjct: 583 aatgcccaa 575
>gb|BC073436.1| Xenopus laevis MGC80929 protein, mRNA (cDNA clone MGC:80929 IMAGE:5516050), complete cds Length = 1219 Score = 77.8 bits (39), Expect = 5e-11 Identities = 123/151 (81%) Strand = Plus / Minus Query: 501 tctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattg 560 ||||||| ||||| |||| || |||||||| ||||| |||||||| | ||| || || | Sbjct: 714 tctttttatgcaaattcaacagcatcttctgttcaagttcattttttctgtaattaatgg 655 Query: 561 caatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || |||||||| || ||||| || ||||||||||| ||||| |||||||||||||||| Sbjct: 654 ttatggagtagtaatgtctgttaagaccatgaataagagcctgtatagatggtttgttta 595 Query: 621 ggtgcccaacattcgatgttgtctgccgtgg 651 ||||||| ||| || || || |||||||| Sbjct: 594 aatgcccaagatttgaagtggtttgccgtgg 564
>emb|BX829732.1|CNS0A1XY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 348 Score = 77.8 bits (39), Expect = 5e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 245 aagaccactgtgtcgagcatggtccctagggtctggactatgttcgatgacatcaaattc 304 ||||| || ||||||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct: 191 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 132 Query: 305 gagacatgctcctccaagtgcttctttgcatcctgccgcccgacatttgctattgccagt 364 |||||||| || |||| |||||||||||||| || | || ||||| | |||||||| Sbjct: 131 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 72 Query: 365 ttctcaggcggcagttcatcctcctcttgcactgccttgttatattt 411 ||||| || | || || ||||||||||| || |||||||||||||| Sbjct: 71 ttctctggtgacaactcgtcctcctcttgaaccgccttgttatattt 25
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 77.8 bits (39), Expect = 5e-11 Identities = 123/151 (81%) Strand = Plus / Plus Query: 284 atgttcgatgacatcaaattcgagacatgctcctccaagtgcttctttgcatcctgccgc 343 ||||| || |||||||| || ||||||||||| || | ||||||||| ||||| || | Sbjct: 67322 atgttggaagacatcaagtttgagacatgctcttcaaggtgcttcttggcatcttgtctt 67381 Query: 344 ccgacatttgctattgccagtttctcaggcggcagttcatcctcctcttgcactgccttg 403 || |||||||||||||| || |||||||| | || ||||| |||||||| || |||||| Sbjct: 67382 cccacatttgctattgcaagcttctcaggggaaagctcatcttcctcttggacagccttg 67441 Query: 404 ttatatttgatggccagactaagcatttcct 434 || ||||||| || | ||| |||||||||| Sbjct: 67442 ttgtatttgacagctaaactcagcatttcct 67472 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 602 tgaatagatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggcca 661 ||||| ||||||||||| || ||||| | ||| ||||||||||||| ||| || || ||| Sbjct: 67919 tgaatggatggtttgttaagatgccccaaattggatgttgtctgccttggttcttgacca 67978 Query: 662 agcatcatggtctg 675 |||||||| ||||| Sbjct: 67979 agcatcattgtctg 67992 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Plus Query: 494 gtccatttctttttgtgcaagttcagcaacatcttctcctcaagctcatt 543 ||||||||||| ||||| | || |||| ||||||||||||||| ||||| Sbjct: 67700 gtccatttcttcttgtggagattaagcagcatcttctcctcaagttcatt 67749
>emb|BX056617.1|CNS09FUL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC36AB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 708 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || Sbjct: 512 ttgtgcaagttcagcaacatcttctgctccagctcattcttgcggtagttgatactgatg 571 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 572 gagtagtagttacggttcagcccgtggatcagtgcctg 609
>emb|BX031535.1|CNS08WHV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1005 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || Sbjct: 530 ttgtgcaagttcagcaacatcttctgctccagctcattcttgcggtagttgatactgatg 589 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 590 gagtagtagttacggttcagcccgtggatcagtgcctg 627
>emb|BX031534.1|CNS08WHU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1061 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || Sbjct: 772 ttgtgcaagttcagcaacatcttctgctccagctcattcttgcggtagttgatactgatg 713 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 712 gagtagtagttacggttcagcccgtggatcagtgcctg 675
>emb|BX008173.1|CNS08EGX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || Sbjct: 510 ttgtgcaagttcagcaacatcttctgctccagctcattcttgcggtagttgatactgatg 569 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 570 gagtagtagttacggttcagcccgtggatcagtgcctg 607
>emb|BX008172.1|CNS08EGW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| || Sbjct: 751 ttgtgcaagttcagcaacatcttctgctccagctcattcttgcggtagttgatactgatg 692 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 691 gagtagtagttacggttcagcccgtggatcagtgcctg 654
>ref|XM_852348.1| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 4 (LOC478765), mRNA Length = 1331 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 730 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 671 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || ||||| ||||| || |||||||| | |||||| |||||||| ||||||| Sbjct: 670 taatagtgtctgtttagtccatgaattaatgcctggatagatggcttgttta 619
>ref|XM_852307.1| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 3 (LOC478765), mRNA Length = 1160 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 559 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 500 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || ||||| ||||| || |||||||| | |||||| |||||||| ||||||| Sbjct: 499 taatagtgtctgtttagtccatgaattaatgcctggatagatggcttgttta 448
>ref|XM_535931.2| PREDICTED: Canis familiaris similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, transcript variant 2 (LOC478765), mRNA Length = 1356 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 755 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 696 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || ||||| ||||| || |||||||| | |||||| |||||||| ||||||| Sbjct: 695 taatagtgtctgtttagtccatgaattaatgcctggatagatggcttgttta 644
>emb|CR387677.1| Gallus gallus finished cDNA, clone ChEST73p15 Length = 1446 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||| |||| ||||||||| | || || Sbjct: 844 tgcaaatttagcaacatcttctgttctagttcattcttcctgtagttgatagtgatggaa 785 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 ||||| || ||||||||||||||||| || ||||| |||||||| ||||||| Sbjct: 784 tagtaatgtctgttcagcccatgaattagagcctggatagatggcttgttta 733
>ref|XM_515855.1| PREDICTED: Pan troglodytes similar to 26S proteasome-associated pad1 homolog (LOC459686), mRNA Length = 906 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 635 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 576 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 575 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 516 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 515 agattcgaagttgt 502
>ref|NM_005805.2| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (PSMD14), mRNA Length = 1278 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 975 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 916 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 915 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 856 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 855 agattcgaagttgt 842
>gb|BC066336.1| Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, mRNA (cDNA clone MGC:87397 IMAGE:5296432), complete cds Length = 1278 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 975 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 916 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 915 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 856 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 855 agattcgaagttgt 842
>emb|CR615752.1| full-length cDNA clone CS0DI002YC21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1492 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 933 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 874 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 873 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 814 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 813 agattcgaagttgt 800
>emb|CR617325.1| full-length cDNA clone CS0DF011YP17 of Fetal brain of Homo sapiens (human) Length = 1527 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 984 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 925 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 924 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 865 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 864 agattcgaagttgt 851
>emb|CR606475.1| full-length cDNA clone CS0DM002YB05 of Fetal liver of Homo sapiens (human) Length = 1481 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 933 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 874 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 873 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 814 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 813 agattcgaagttgt 800
>emb|CR595585.1| full-length cDNA clone CS0DI058YD16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1522 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 960 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 901 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 900 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 841 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 840 agattcgaagttgt 827
>dbj|AK055128.1| Homo sapiens cDNA FLJ30566 fis, clone BRAWH2005068, highly similar to Human 26S proteasome-associated pad1 homolog (POH1) mRNA Length = 1951 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 1366 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 1307 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 1306 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 1247 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 1246 agattcgaagttgt 1233
>ref|XM_314713.2| Anopheles gambiae str. PEST ENSANGP00000013055 (ENSANGG00000010566), mRNA Length = 1404 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 |||||||||||||||| |||||||| ||| |||||||| || ||||||||||| || Sbjct: 882 ttgtgcaagttcagcagcatcttctgctccagctcattcttgcggtagttgatactgatg 823 Query: 566 gagtagtagtgcctgttcagcccatgaataagtgcctg 603 |||||||||| | ||||||||| || || |||||||| Sbjct: 822 gagtagtagttacggttcagcccgtggatcagtgcctg 785
>gb|U86782.1|HSU86782 Human 26S proteasome-associated pad1 homolog (POH1) mRNA, complete cds Length = 1132 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 861 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 802 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 801 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 742 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 741 agattcgaagttgt 728
>gb|AY610219.1| Sus scrofa clone Clu_9918.scr.msk.p1.Contig2, mRNA sequence Length = 1442 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 503 tttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgca 562 ||||| ||||| || ||||||||||||| || || || |||||||| ||||| |||| | Sbjct: 842 tttttatgcaaatttagcaacatcttctgttccagttcgtttttccgatagttaattgta 783 Query: 563 atagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttagg 622 || ||||| || || ||||| || || ||||| | |||||| |||||||| ||||||||| Sbjct: 782 atggagtaataatgtctgtttagtccgtgaattaatgcctggatagatggcttgtttagg 723 Query: 623 tg 624 || Sbjct: 722 tg 721
>dbj|AB209220.1| Homo sapiens mRNA for 26S proteasome-associated pad1 homolog variant protein Length = 4891 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || ||||||||||||| || || ||||||||||| ||||| || | ||| ||| Sbjct: 4305 tgcaaatttagcaacatcttctgttccagttcatttttccgatagttaatagtaatggag 4246 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccca 628 || || || ||||| || |||||||| | |||||| |||||||| ||||||| ||| || Sbjct: 4245 taataatgtctgtttagtccatgaattaatgcctggatagatggcttgtttaagtgaccc 4186 Query: 629 acattcgatgttgt 642 | |||||| ||||| Sbjct: 4185 agattcgaagttgt 4172
>ref|XM_615793.2| PREDICTED: Bos taurus similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11) (MAD1) (LOC535683), mRNA Length = 1272 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Minus Query: 539 tcatttttccggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagt 598 ||||||||||| ||||| || | ||| ||||| || || ||||| || |||||||| | | Sbjct: 662 tcatttttccgatagttaatagtaatggagtaataatgtctgtttagtccatgaattaat 603 Query: 599 gcctgaatagatggtttgtttaggtg 624 ||||||||||| || ||||||||||| Sbjct: 602 gcctgaatagacggcttgtttaggtg 577
>emb|CR675316.2|CNS0FK1M Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 |||| |||||||| |||||| | ||| || |||||||||| ||| ||||| | || ||| Sbjct: 759 tgcaggttcagcagcatcttttgctccagttcatttttcctgtaattgatagtgatggag 700 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaat 606 || || ||||||||||| |||||||| || |||||||| Sbjct: 699 taataatgcctgttcagtccatgaatcagcgcctgaat 662
>gb|BC045094.1| Xenopus laevis 26S proteasome-associated pad1 homolog, mRNA (cDNA clone MGC:53911 IMAGE:5569802), complete cds Length = 1227 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Minus Query: 501 tctttttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattg 560 ||||||| ||||| |||| || |||||| | ||||| |||||||| | ||| || || | Sbjct: 713 tctttttatgcaaattcaacagcatcttttgttcaagttcattttttctgtaattaatgg 654 Query: 561 caatagagtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgttta 620 || |||||||| |||| ||| || ||||||||||| ||||| |||||||| ||||||| Sbjct: 653 ttattgagtagtaatgccggttaagaccatgaataagagcctgtatagatggcttgttta 594 Query: 621 ggtgcccaa 629 ||||||| Sbjct: 593 aatgcccaa 585
>gb|DQ214693.1| Taeniopygia guttata clone 0061P0025H01 26S proteasome-associated pad1-like variant 2-like mRNA, complete sequence Length = 1419 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || |||| |||||||| || || ||||| |||| ||||||||| | || || Sbjct: 816 tgcaaatttagcagcatcttctgttctagttcattcttcctgtagttgatggtgatggaa 757 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtg 624 ||||| || ||||| || ||||| || |||||||| |||||||| ||||||||||| Sbjct: 756 tagtaatgtctgtttagtccatggattagtgcctggatagatggcttgtttaggtg 701
>gb|DQ214692.1| Taeniopygia guttata clone 0061P0016E01 26S proteasome-associated pad1-like variant 2-like mRNA, complete sequence Length = 1424 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || |||| |||||||| || || ||||| |||| ||||||||| | || || Sbjct: 820 tgcaaatttagcagcatcttctgttctagttcattcttcctgtagttgatggtgatggaa 761 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtg 624 ||||| || ||||| || ||||| || |||||||| |||||||| ||||||||||| Sbjct: 760 tagtaatgtctgtttagtccatggattagtgcctggatagatggcttgtttaggtg 705
>gb|DQ214691.1| Taeniopygia guttata clone 0061P0006D06 26S proteasome-associated pad1-like variant 1-like mRNA, complete sequence Length = 1463 Score = 56.0 bits (28), Expect = 2e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 ||||| || |||| |||||||| || || ||||| |||| ||||||||| | || || Sbjct: 852 tgcaaatttagcagcatcttctgttctagttcattcttcctgtagttgatggtgatggaa 793 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtg 624 ||||| || ||||| || ||||| || |||||||| |||||||| ||||||||||| Sbjct: 792 tagtaatgtctgtttagtccatggattagtgcctggatagatggcttgtttaggtg 737
>ref|XM_959273.1| Neurospora crassa OR74A hypothetical protein (NCU00823.1) partial mRNA Length = 1263 Score = 54.0 bits (27), Expect = 7e-04 Identities = 123/155 (79%) Strand = Plus / Minus Query: 548 cggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaata 607 ||||||||||| | || |||||||||||||||||||| || || || || ||||| || Sbjct: 878 cggtagttgatgccgatcgagtagtagtgcctgttcaggccgtggatgagggcctggatg 819 Query: 608 gatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatc 667 || || ||||| || || || | || ||||| ||||| || |||||||| || ||||| Sbjct: 818 gaaggcttgttgagatgtcccaagttggatgtcgtctggcggggctcctgacccagcatg 759 Query: 668 atggtctgagggttaatgagacggaatgcatcaat 702 | | ||| ||||| ||||||||||| |||||||| Sbjct: 758 agcgactgggggttgatgagacggaaagcatcaat 724
>ref|XM_325002.1| Neurospora crassa OR74A hypothetical protein (NCU00823.1) partial mRNA Length = 1263 Score = 54.0 bits (27), Expect = 7e-04 Identities = 123/155 (79%) Strand = Plus / Minus Query: 548 cggtagttgattgcaatagagtagtagtgcctgttcagcccatgaataagtgcctgaata 607 ||||||||||| | || |||||||||||||||||||| || || || || ||||| || Sbjct: 878 cggtagttgatgccgatcgagtagtagtgcctgttcaggccgtggatgagggcctggatg 819 Query: 608 gatggtttgtttaggtgcccaacattcgatgttgtctgccgtggctcctggccaagcatc 667 || || ||||| || || || | || ||||| ||||| || |||||||| || ||||| Sbjct: 818 gaaggcttgttgagatgtcccaagttggatgtcgtctggcggggctcctgacccagcatg 759 Query: 668 atggtctgagggttaatgagacggaatgcatcaat 702 | | ||| ||||| ||||||||||| |||||||| Sbjct: 758 agcgactgggggttgatgagacggaaagcatcaat 724
>emb|AJ249917.1|SDO249917 Aphrocallistes vastus mRNA for putative multidrug resistance protein (pohl gene) Length = 1068 Score = 54.0 bits (27), Expect = 7e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||| ||||||||||| ||| | |||||| ||| ||||||||| | || Sbjct: 705 ttgtgcaagttcatcaacatcttctgctccaactcattcttcttgtagttgatgggcatt 646 Query: 566 gagtagtagtg 576 ||||||||||| Sbjct: 645 gagtagtagtg 635
>emb|AJ245813.1|AVA245813 Aphrocallistes vastus mRNA for potential multidrug resistance protein (POHL gene) Length = 1068 Score = 54.0 bits (27), Expect = 7e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 506 ttgtgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaata 565 ||||||||||||| ||||||||||| ||| | |||||| ||| ||||||||| | || Sbjct: 705 ttgtgcaagttcatcaacatcttctgctccaactcattcttcttgtagttgatgggcatt 646 Query: 566 gagtagtagtg 576 ||||||||||| Sbjct: 645 gagtagtagtg 635
>ref|XM_744382.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit RpnK (Afu2g03400) partial mRNA Length = 1008 Score = 50.1 bits (25), Expect = 0.010 Identities = 76/93 (81%) Strand = Plus / Minus Query: 568 gtagtagtgcctgttcagcccatgaataagtgcctgaatagatggtttgtttaggtgccc 627 |||||| || ||||||| ||| || || || ||||| || ||||| ||||| ||||| || Sbjct: 615 gtagtaatgtctgttcaacccgtggatgagcgcctggattgatggcttgttcaggtgacc 556 Query: 628 aacattcgatgttgtctgccgtggctcctggcc 660 | ||| ||||| |||||||| ||||||||||| Sbjct: 555 caaattagatgtcgtctgccggggctcctggcc 523
>ref|XM_454588.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E14190g predicted mRNA Length = 936 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 691 gaatgcatcaatgaccactttcccctt 717 ||||||||||||||||||||| ||||| Sbjct: 483 gaatgcatcaatgaccactttaccctt 457
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 691 gaatgcatcaatgaccactttcccctt 717 ||||||||||||||||||||| ||||| Sbjct: 1252333 gaatgcatcaatgaccactttaccctt 1252359
>emb|CR712625.2|CNS0GCT9 Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 44.1 bits (22), Expect = 0.63 Identities = 79/98 (80%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatcttctcctcaagctcatttttccggtagttgattgcaatagag 568 |||| |||||||| |||||| | ||| || || ||||||| ||| ||||| | || | | Sbjct: 759 tgcaggttcagcagcatcttttgctccagttcgtttttcctgtaattgatagtgatgggg 700 Query: 569 tagtagtgcctgttcagcccatgaataagtgcctgaat 606 || || ||||||||||| |||||||| || |||||||| Sbjct: 699 taataatgcctgttcagtccatgaatcagcgcctgaat 662
>ref|XM_961333.1| PREDICTED: Tribolium castaneum similar to CG18174-PA, transcript variant 1 (LOC657072), mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 tcatttttccggtagttgattgcaatagagtagtagtgcctgttca 584 ||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 635 tcattcttccggtagtttatactaatagagtagtagtgtctgttca 590
>ref|XM_970644.1| PREDICTED: Tribolium castaneum similar to CG18174-PA, transcript variant 2 (LOC657072), mRNA Length = 1075 Score = 44.1 bits (22), Expect = 0.63 Identities = 40/46 (86%) Strand = Plus / Minus Query: 539 tcatttttccggtagttgattgcaatagagtagtagtgcctgttca 584 ||||| ||||||||||| || ||||||||||||||| ||||||| Sbjct: 774 tcattcttccggtagtttatactaatagagtagtagtgtctgttca 729
>ref|NM_001016897.2| Xenopus tropicalis vesicle-associated membrane protein 4 (vamp4), mRNA Length = 1811 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 aaaaataacagacagttctgta 218 |||||||||||||||||||||| Sbjct: 598 aaaaataacagacagttctgta 577
>emb|CR848541.2| Xenopus tropicalis finished cDNA, clone TEgg138f13 Length = 1811 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 aaaaataacagacagttctgta 218 |||||||||||||||||||||| Sbjct: 598 aaaaataacagacagttctgta 577
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 566 gagtagtagtgcctgttcagcccatgaat 594 |||||||||||| |||| ||||||||||| Sbjct: 79970 gagtagtagtgcttgttgagcccatgaat 79998
>ref|XM_223286.3| PREDICTED: Rattus norvegicus similar to CG32774-PA (predicted) (LOC289529), mRNA Length = 6087 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 atgacagactgaccaacaaaa 200 ||||||||||||||||||||| Sbjct: 3566 atgacagactgaccaacaaaa 3586
>emb|AL929068.20| Mouse DNA sequence from clone RP23-9N11 on chromosome 2, complete sequence Length = 131152 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 ctacaccagacaaacaaaatc 159 ||||||||||||||||||||| Sbjct: 51691 ctacaccagacaaacaaaatc 51671
>gb|AC166359.3| Mus musculus BAC clone RP23-303I23 from chromosome 10, complete sequence Length = 195865 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 agacagttctgtatatagag 225 |||||||||||||||||||| Sbjct: 71306 agacagttctgtatatagag 71287
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 gcaagttcagcaacatcttc 529 |||||||||||||||||||| Sbjct: 1471671 gcaagttcagcaacatcttc 1471690
>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence Length = 151344 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ttctcaggcggcagttcatc 384 |||||||||||||||||||| Sbjct: 36433 ttctcaggcggcagttcatc 36414
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcgaatttctttataatcaa 486 |||||||||||||||||||| Sbjct: 439021 tcgaatttctttataatcaa 439040
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcgaatttctttataatcaa 486 |||||||||||||||||||| Sbjct: 422531 tcgaatttctttataatcaa 422550
>gb|AC147243.2| Mus musculus BAC clone RP23-444P22 from chromosome 6, complete sequence Length = 181025 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 actgaccaacaaaaataaca 206 |||||||||||||||||||| Sbjct: 114985 actgaccaacaaaaataaca 114966
>gb|AC122539.4| Mus musculus BAC clone RP24-550H10 from chromosome 10, complete sequence Length = 146242 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 agacagttctgtatatagag 225 |||||||||||||||||||| Sbjct: 124120 agacagttctgtatatagag 124101
>gb|AE004208.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 116 of 251 of the complete chromosome Length = 10254 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tgcaagttcagcaacatctt 528 |||||||||||||||||||| Sbjct: 113 tgcaagttcagcaacatctt 94
>gb|AC073486.5| Homo sapiens BAC clone RP11-807H17 from 7, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 acaccagacaaacaaaatct 160 |||||||||||||||||||| Sbjct: 78407 acaccagacaaacaaaatct 78426
>gb|AC163330.4| Mus musculus chromosome 5, clone RP23-167H23, complete sequence Length = 207781 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ttctcaggcggcagttcatc 384 |||||||||||||||||||| Sbjct: 68358 ttctcaggcggcagttcatc 68377
>emb|AL513209.16| Human DNA sequence from clone RP11-177F15 on chromosome 1 Contains part of a novel gene (FLJ33910), complete sequence Length = 140169 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 gaagtgtttcctttaattaa 84 |||||||||||||||||||| Sbjct: 117800 gaagtgtttcctttaattaa 117781
>emb|AL354721.18| Human DNA sequence from clone RP11-373E22 on chromosome 1 Contains part of gene DKFZP566D1346, complete sequence Length = 57070 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gggaagtgtttcctttaatt 82 |||||||||||||||||||| Sbjct: 17877 gggaagtgtttcctttaatt 17896
>gb|AC158128.3| Mus musculus chromosome 15, clone RP24-310D6, complete sequence Length = 158257 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctcttgcactgccttgttat 407 |||||||||||||||||||| Sbjct: 71208 ctcttgcactgccttgttat 71189
>emb|AL844606.4| Mouse DNA sequence from clone RP23-465I8 on chromosome 13, complete sequence Length = 44576 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 caaacaaaatctaacactgc 168 |||||||||||||||||||| Sbjct: 25527 caaacaaaatctaacactgc 25546
>ref|NM_142889.1| Drosophila melanogaster CG4374-RA (CG4374), mRNA Length = 2577 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ggcggcagttcatcctcctc 390 |||||||||||||||||||| Sbjct: 1891 ggcggcagttcatcctcctc 1910
>gb|AC022345.2|AC022345 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone BACR10J19, complete sequence Length = 182416 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 482 atcaacccatctgtccatttctttttgtgcaa 513 |||||||| ||| ||||||||||| ||||||| Sbjct: 62853 atcaacccttctctccatttctttgtgtgcaa 62822
>emb|BX323804.9| Zebrafish DNA sequence from clone DKEY-270K22 in linkage group 2, complete sequence Length = 121116 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 catttctttttgtgcaagtt 516 |||||||||||||||||||| Sbjct: 50582 catttctttttgtgcaagtt 50601
>gb|AC008235.4|AC008235 Drosophila melanogaster, chromosome 3R, region 94F-95A, BAC clone BACR15B19, complete sequence Length = 175669 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ggcggcagttcatcctcctc 390 |||||||||||||||||||| Sbjct: 55138 ggcggcagttcatcctcctc 55119
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 agactgaccaacaaaaataa 204 |||||||||||||||||||| Sbjct: 56348 agactgaccaacaaaaataa 56367
>gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105622 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 tttctttttgtgcaagttcagcaa 522 ||||||||||||||| |||||||| Sbjct: 91754 tttctttttgtgcaatttcagcaa 91777
>gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, complete sequence Length = 149549 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 tgccgtggctcctggccaag 663 |||||||||||||||||||| Sbjct: 91559 tgccgtggctcctggccaag 91578
>emb|BX649602.5| Zebrafish DNA sequence from clone CH211-57E5 in linkage group 18, complete sequence Length = 192182 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ccatctgtccatttcttttt 507 |||||||||||||||||||| Sbjct: 140195 ccatctgtccatttcttttt 140176
>gb|AC112957.14| Mus musculus chromosome 15, clone RP23-418C6, complete sequence Length = 186051 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctcttgcactgccttgttat 407 |||||||||||||||||||| Sbjct: 143289 ctcttgcactgccttgttat 143308
>gb|AE003743.3| Drosophila melanogaster chromosome 3R, section 81 of 118 of the complete sequence Length = 210258 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ggcggcagttcatcctcctc 390 |||||||||||||||||||| Sbjct: 63444 ggcggcagttcatcctcctc 63425
>gb|AE003497.3| Drosophila melanogaster chromosome X, section 49 of 74 of the complete sequence Length = 275651 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 482 atcaacccatctgtccatttctttttgtgcaa 513 |||||||| ||| ||||||||||| ||||||| Sbjct: 190325 atcaacccttctctccatttctttgtgtgcaa 190294
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome Length = 892758 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tcgaatttctttataatcaa 486 |||||||||||||||||||| Sbjct: 428954 tcgaatttctttataatcaa 428973
>emb|AL844209.6| Mouse DNA sequence from clone RP23-105M20 on chromosome 2, complete sequence Length = 200361 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 atctgtccatttctttttgt 509 |||||||||||||||||||| Sbjct: 40439 atctgtccatttctttttgt 40420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,460,055 Number of Sequences: 3902068 Number of extensions: 6460055 Number of successful extensions: 131953 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131645 Number of HSP's gapped (non-prelim): 295 length of query: 718 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 695 effective length of database: 17,143,297,704 effective search space: 11914591904280 effective search space used: 11914591904280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
