Clone Name | rbasd19d14 |
---|---|
Clone Library Name | barley_pub |
>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 292 Score = 75.5 bits (184), Expect = 1e-13 Identities = 43/152 (28%), Positives = 77/152 (50%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 I+ GD+A+++ + P F++LGK +G G+G K+ +I+ + A SE L A K Sbjct: 133 IMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASK 192 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236 +G P + L G ++ + ++ G M++ ++NP F + QKD+ LAL A++ Sbjct: 193 AGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALN 252 Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 +P + G LD SA+ + L+ Sbjct: 253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284
>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)| Length = 288 Score = 71.6 bits (174), Expect = 2e-12 Identities = 37/122 (30%), Positives = 62/122 (50%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 I+ G+K ++ +P F ++G+ + G G+G K+ + + + M +E + A K Sbjct: 136 IMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQK 195 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236 SGL P+ +L + GA + P MLQG++ P F +KH KDM +AL + Sbjct: 196 SGLEPENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEE 255 Query: 235 MP 230 MP Sbjct: 256 MP 257
>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/147 (25%), Positives = 64/147 (43%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 ++ GDKA++D + GE+G G KL +I+ + A SE L LA K Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236 +G++P + + G + + K P ++ ++ P F + KD+ AL Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253 Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAV 155 +P+ R+ GLG D SA+ Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280
>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/147 (25%), Positives = 64/147 (43%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 ++ GDKA++D + GE+G G KL +I+ + A SE L LA K Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236 +G++P + + G + + K P ++ ++ P F + KD+ AL Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253 Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAV 155 +P+ R+ GLG D SA+ Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280
>YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-)| Length = 261 Score = 60.1 bits (144), Expect = 5e-09 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKM-KLVVNMIMGSMMNAFSEGLCLAD 419 I+ AG P D L ++ F +GE A K+ +N ++ SM+ A SE + + Sbjct: 109 IITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSMLEALSESFLMME 168 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPA-FPLKHQQKDMRLALSLGDENA 242 K GL + L++ +P+++ G M + + PA F + KD LAL+ + Sbjct: 169 KYGLEQKQFLEIAS-ALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKRVS 227 Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 ++P+ G GDLD++A+ + +K Sbjct: 228 ANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK 261
>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)| Length = 290 Score = 60.1 bits (144), Expect = 5e-09 Identities = 30/109 (27%), Positives = 57/109 (52%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 I+ GD + +++ +P +G+K G G+G +KL ++ G A +E + L+++ Sbjct: 139 IMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQ 198 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRL 269 G++P+ ++D GA + P M + + P F +KH KD+RL Sbjct: 199 LGIAPELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLKDLRL 247
>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 55.8 bits (133), Expect = 9e-08 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419 +LA G + P +G + G G G ++KL+ N M +NA S E L + Sbjct: 135 LLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242 GLS L V+ A F P+ +++G +PAF + KD+ +AL + ++ Sbjct: 194 ALGLSFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQLH 253 Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 V MP+ AR+ G G D+SA+ E ++ Sbjct: 254 VPMPLGAASREVYNLARAAGRGREDWSAILEQVR 287
>Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.-.-)| Length = 301 Score = 54.7 bits (130), Expect = 2e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGE-MGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 419 ++A+G K ++ + P D K + +GE +G GA +K+V ++ G + A +E + LA Sbjct: 140 VMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALAS 199 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 239 K+G+ + DV+ A + MF+ + +++G Y P + KD+ L Sbjct: 200 KAGIPLDVMYDVVTNAAGNSWMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLHF 259 Query: 238 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 146 + + A + G G D SAV ++ Sbjct: 260 PLHLASTAYSMFTEASNAGYGKEDDSAVIKI 290
>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region| (Fragment) Length = 194 Score = 52.8 bits (125), Expect = 8e-07 Identities = 31/123 (25%), Positives = 58/123 (47%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 ++ GD+A +D + P LG +G G K+V + + ++ +EGL A Sbjct: 40 VMMGGDQAHFDTVKPVISAYSCAEL-LGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKS 98 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236 +GL +++V+ G + + + +M QG Y+ F + +KD+ +AL N Sbjct: 99 AGLDGLKVIEVISKGRAQSWQMENRYKTMWQGQYDFGFAIDWMRKDLGIALDEARRNGSH 158 Query: 235 MPV 227 +PV Sbjct: 159 LPV 161
>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 52.0 bits (123), Expect = 1e-06 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 2/154 (1%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419 +LA G + P +G + G G G ++KL+ N M +NA S E L + Sbjct: 135 LLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242 L + V+ A F P+ +L G +PAF + KD+ +AL + ++ Sbjct: 194 ALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH 253 Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 V MP+ AR+ G G D+SA+ E ++ Sbjct: 254 VPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 52.0 bits (123), Expect = 1e-06 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 2/154 (1%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419 +LA G + P +G + G G G ++KL+ N M +NA S E L + Sbjct: 135 LLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242 L + V+ A F P+ +L G +PAF + KD+ +AL + ++ Sbjct: 194 ALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH 253 Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 V MP+ AR+ G G D+SA+ E ++ Sbjct: 254 VPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 347 Score = 51.2 bits (121), Expect = 2e-06 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 12/158 (7%) Frame = -2 Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413 + G + Y P +G+ S + G GNG+ K+ N+ M M SE L L Sbjct: 184 MVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSL 243 Query: 412 GLSPQTLLDVLDLGA-------IANPMFKMKGPSMLQG-----SYNPAFPLKHQQKDMRL 269 G+S TL +VL+ + NP+ P +++G YN F K KD+ L Sbjct: 244 GISASTLTEVLNTSSGRCWSSDAYNPV-----PGVMKGVPSSRDYNGGFASKLMAKDLNL 298 Query: 268 ALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAV 155 A + +E P+ G DFS V Sbjct: 299 AAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCV 336
>YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)| Length = 302 Score = 50.8 bits (120), Expect = 3e-06 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLG-EMGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 419 ++A+G ++ + P + + K + +G E G G+ +K++ ++ G + A +E + LA Sbjct: 141 VMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAA 200 Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 239 ++G+ + DV+ A + MF+ + ++ G Y P + KD+ L Sbjct: 201 RAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHF 260 Query: 238 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 146 +P+ A + G G D SAV ++ Sbjct: 261 PLPLASTALNMFTSASNAGYGKEDDSAVIKI 291
>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 50.8 bits (120), Expect = 3e-06 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Frame = -2 Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413 + GD++ P + + K G G G K+ NM++ A +E LA+K Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192 Query: 412 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 257 GLS Q+L DV+ GA N + GP S + P F KD+ LA+ Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251 Query: 256 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 + P+ + DLDFSAV L+ Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289
>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 50.8 bits (120), Expect = 3e-06 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Frame = -2 Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413 + GD++ P + + K G G G K+ NM++ A +E LA+K Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192 Query: 412 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 257 GLS Q+L DV+ GA N + GP S + P F KD+ LA+ Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251 Query: 256 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 + P+ + DLDFSAV L+ Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289
>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 324 Score = 50.8 bits (120), Expect = 3e-06 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 7/158 (4%) Frame = -2 Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413 + G +A Y+ + + +GKK G G G KL NM++ M SE + LA + Sbjct: 161 MVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQ 220 Query: 412 GLSPQTLLDVLD-------LGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLG 254 GL ++++ I NP+ + + Y F KD+ LA + Sbjct: 221 GLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVA 280 Query: 253 DENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 + + +P+ GLG+ DFS V++++K Sbjct: 281 NASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMK 318
>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| Length = 298 Score = 48.9 bits (115), Expect = 1e-05 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Frame = -2 Query: 553 PAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDL 374 P + +G+ F G+ G G K+ NM++G +M +E L L K+GL P L +V+ Sbjct: 149 PVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQ 208 Query: 373 GAIANPMFKMKGP-------SMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPV 227 + N + P + Y F ++ KD+ LAL+ S P+ Sbjct: 209 SSGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPL 264
>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 7/140 (5%) Frame = -2 Query: 538 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 368 +G + G +G+G K+ NM++ M +E + L +SGL P+ L +L++ + Sbjct: 191 MGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRC 250 Query: 367 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 200 NP+ + +Y F KD+ LA + + Sbjct: 251 WSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYR 310 Query: 199 XARSLGLGDLDFSAVHEVLK 140 S G DFS+V + L+ Sbjct: 311 MMCSKGYSKKDFSSVFQYLR 330
>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| (EC 1.1.1.31) (HIBADH) Length = 299 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/73 (28%), Positives = 37/73 (50%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 ++ AG+ A + ++GK LG +GNG K+ NM++G M A +E + L Sbjct: 136 MVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGIS 195 Query: 415 SGLSPQTLLDVLD 377 GL + L +++ Sbjct: 196 MGLDAKALAGIVN 208
>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 40.0 bits (92), Expect = 0.005 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 7/142 (4%) Frame = -2 Query: 544 DILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA- 368 + +G + G +G G K+ NM++ M +E + L +SGL P+ L +L++ + Sbjct: 189 ECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSG 248 Query: 367 ------IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXX 206 NP+ + +Y F KD+ LA + + Sbjct: 249 RCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSLAHQI 308 Query: 205 XXXARSLGLGDLDFSAVHEVLK 140 S G DFS+V + L+ Sbjct: 309 YRMMCSKGYSKKDFSSVFQYLR 330
>Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (EC 1.1.-.-)| Length = 295 Score = 36.6 bits (83), Expect = 0.056 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%) Frame = -2 Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416 ++ D + + F GE G G +MKL NM+ A +E LA+ Sbjct: 140 VMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEA 199 Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPS---MLQGSYNPAFP-------LKHQ----QKD 278 G LD++ LG + G + M + + P P L+H +KD Sbjct: 200 CG------LDLVALGKVVRHSDSFTGGAGAIMFRNTTAPMEPADPLRPLLEHTRGLGEKD 253 Query: 277 MRLALSLGDENAVSMPV 227 + LAL+LG+ +V +P+ Sbjct: 254 LSLALALGEVVSVDLPL 270
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 35.0 bits (79), Expect = 0.16 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 7/140 (5%) Frame = -2 Query: 538 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 368 +G + G +G G K+ NM++ M +E + L + GL P+ L +L++ + Sbjct: 192 MGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRC 251 Query: 367 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 200 NP+ + +Y F KD+ LA + + Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311 Query: 199 XARSLGLGDLDFSAVHEVLK 140 + G DFS+V + L+ Sbjct: 312 MMCAKGYSKKDFSSVFQFLR 331
>GATB_ANASP (Q8YX22) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 491 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = -2 Query: 568 YDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLL 389 YD V D++ + F + + +GA K N I + ++ + GL+P L Sbjct: 332 YDTRVLTEDVIVSQYFEVA-IASGANPKAAANWITQDIAAYLNKQKLSITEIGLTPANLA 390 Query: 388 DV---LDLGAIANPMFKMKGPSMLQG 320 DV ++ G I+N K K P +L G Sbjct: 391 DVITRIETGKISNAQAKQKLPELLTG 416
>RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1| protein homolog) Length = 2105 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 401 GAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLL------PKYVKCRDHV 562 G T S+G S T D + H+F C ++ LP+ E+ + K +K + HV Sbjct: 620 GTDKTISKTPASVGNSTVTTRIDQLIHEFSHCGLTKLPENEKQISSSVASKKKMKSQQHV 679 Query: 563 I 565 I Sbjct: 680 I 680
>PANX1_HUMAN (Q96RD7) Pannexin-1| Length = 426 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +2 Query: 428 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 586 TE+LG+S+ S H + + L+ KY+ CR +I L+AC Sbjct: 176 TENLGQSLWEVSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLAC 228
>HBL1_CAEEL (Q9XYD3) Hunchback-like protein| Length = 982 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 423 AKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPS-MSNAGTMSSYSALSPAA 590 A SPS+ + P L +S I AP PI+P+ N+F S ++ A + A P+A Sbjct: 874 APHSPSDTTSV--PSPPLHSSSIVAPIPITPQPNEFLQSILAQASLLGPLLANRPSA 928
>CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein capD| Length = 599 Score = 30.4 bits (67), Expect = 4.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 576 RHYMMTWSLHLTYLGRSRSFW 514 R Y +TW +HL +G SR FW Sbjct: 106 RLYFITWMMHLLLIGGSRLFW 126
>RPOB_STRT2 (Q5M2F5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1193 Score = 30.0 bits (66), Expect = 5.3 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%) Frame = -2 Query: 565 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 449 DD V A DIL + S+FL +GN A +L+ N + M Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 E + + D L+PQ ++++ + A F S +NP L H+++ Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489
>RPOB_STRT1 (Q5LXV3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1193 Score = 30.0 bits (66), Expect = 5.3 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%) Frame = -2 Query: 565 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 449 DD V A DIL + S+FL +GN A +L+ N + M Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 E + + D L+PQ ++++ + A F S +NP L H+++ Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489
>PANX1_MOUSE (Q9JIP4) Pannexin-1| Length = 426 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = +2 Query: 380 QDIKKRLGAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDH 559 +D+ R G P V TE++G+S+ S H + + L+ KY+ CR Sbjct: 161 RDLDLRDGPGPPGV--TENVGQSLWEISESHFKYPIVEQYLKTKKNSSHLIMKYISCRLV 218 Query: 560 VII*CLVAC 586 + L+AC Sbjct: 219 TFVVILLAC 227
>JSN1_YEAST (P47135) Protein JSN1 (Protein PUF1)| Length = 1091 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = -2 Query: 319 SYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140 S + FPL+HQQ + A++L + ++ R+L + ++FS+V +K Sbjct: 343 SISNVFPLQHQQPQLNNAINLTSTSLATLCSKYGEVISARTLRNLNMALVEFSSVESAVK 402
>RPOB_XANCP (Q8PC56) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1387 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561
>RPOB_XYLFT (Q87A32) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1388 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561
>RPOB_XYLFA (Q9PA86) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1388 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561
>GATB_STRMU (Q8DSG6) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 479 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 523 FFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA 368 FF + GA K V N + G + + D+ GL+P+ L ++L L A Sbjct: 328 FFESALAQGADAKAVSNWLQGDVAQYLNTENQTIDQIGLTPENLTEMLQLVA 379
>RPOB_XANOR (Q5GWS6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1383 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557
>RPOB_XANC5 (Q3BWZ1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1383 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557
>RPOB_XANAC (Q8PNT0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1383 Score = 29.6 bits (65), Expect = 6.9 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557
>RPOB_XANC8 (Q4URD2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1387 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L +A+ GL+PQ L++ + A F S NP + H+++ Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSRFMDQNNPLSEVTHKRR 561
>RPOB_HAEDU (Q7VKL7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.3 bits (64), Expect = 9.0 Identities = 15/56 (26%), Positives = 24/56 (42%) Frame = -2 Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281 A E L L D G++PQ L++ + A F S NP + H+++ Sbjct: 474 AVRERLSLGDLDGITPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRR 529 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,132,146 Number of Sequences: 219361 Number of extensions: 2067221 Number of successful extensions: 5113 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5107 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)