ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.... 75 1e-13
2YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-) 72 2e-12
3GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.... 65 2e-10
4GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.... 65 2e-10
5YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-) 60 5e-09
6Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.... 60 5e-09
7YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-) 56 9e-08
8Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.... 55 2e-07
9YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3... 53 8e-07
10YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-) 52 1e-06
11YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-) 52 1e-06
123HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase... 51 2e-06
13YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-) 51 3e-06
14MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase ... 51 3e-06
15MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase ... 51 3e-06
163HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase... 51 3e-06
17MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1... 49 1e-05
183HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochond... 41 0.003
193HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase... 40 0.004
203HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitocho... 40 0.005
21Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (E... 37 0.056
223HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitocho... 35 0.16
23GATB_ANASP (Q8YX22) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe... 32 1.1
24RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigment... 31 2.4
25PANX1_HUMAN (Q96RD7) Pannexin-1 31 3.1
26HBL1_CAEEL (Q9XYD3) Hunchback-like protein 30 4.0
27CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein... 30 4.0
28RPOB_STRT2 (Q5M2F5) DNA-directed RNA polymerase beta chain (EC 2... 30 5.3
29RPOB_STRT1 (Q5LXV3) DNA-directed RNA polymerase beta chain (EC 2... 30 5.3
30PANX1_MOUSE (Q9JIP4) Pannexin-1 30 5.3
31JSN1_YEAST (P47135) Protein JSN1 (Protein PUF1) 30 5.3
32RPOB_XANCP (Q8PC56) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
33RPOB_XYLFT (Q87A32) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
34RPOB_XYLFA (Q9PA86) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
35GATB_STRMU (Q8DSG6) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe... 30 6.9
36RPOB_XANOR (Q5GWS6) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
37RPOB_XANC5 (Q3BWZ1) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
38RPOB_XANAC (Q8PNT0) DNA-directed RNA polymerase beta chain (EC 2... 30 6.9
39RPOB_XANC8 (Q4URD2) DNA-directed RNA polymerase beta chain (EC 2... 29 9.0
40RPOB_HAEDU (Q7VKL7) DNA-directed RNA polymerase beta chain (EC 2... 29 9.0

>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 292

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 43/152 (28%), Positives = 77/152 (50%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           I+  GD+A+++ + P F++LGK    +G  G+G   K+   +I+   + A SE L  A K
Sbjct: 133 IMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASK 192

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236
           +G  P  +   L  G  ++ + ++ G  M++ ++NP F +   QKD+ LAL      A++
Sbjct: 193 AGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALN 252

Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           +P             + G   LD SA+ + L+
Sbjct: 253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284



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>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)|
          Length = 288

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 37/122 (30%), Positives = 62/122 (50%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           I+  G+K  ++  +P F ++G+   + G  G+G   K+   + + + M   +E +  A K
Sbjct: 136 IMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQK 195

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236
           SGL P+ +L  +  GA  +       P MLQG++ P F +KH  KDM +AL   +     
Sbjct: 196 SGLEPENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEE 255

Query: 235 MP 230
           MP
Sbjct: 256 MP 257



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>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 294

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/147 (25%), Positives = 64/147 (43%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           ++  GDKA++D        +       GE+G G   KL   +I+   + A SE L LA K
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236
           +G++P  +   +  G   + +   K P ++  ++ P F +    KD+  AL         
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253

Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAV 155
           +P+           R+ GLG  D SA+
Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280



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>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 294

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/147 (25%), Positives = 64/147 (43%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           ++  GDKA++D        +       GE+G G   KL   +I+   + A SE L LA K
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236
           +G++P  +   +  G   + +   K P ++  ++ P F +    KD+  AL         
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253

Query: 235 MPVXXXXXXXXXXARSLGLGDLDFSAV 155
           +P+           R+ GLG  D SA+
Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280



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>YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-)|
          Length = 261

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKM-KLVVNMIMGSMMNAFSEGLCLAD 419
           I+ AG         P  D L ++ F +GE    A   K+ +N ++ SM+ A SE   + +
Sbjct: 109 IITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSMLEALSESFLMME 168

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPA-FPLKHQQKDMRLALSLGDENA 242
           K GL  +  L++       +P+++  G  M +  + PA F +    KD  LAL+     +
Sbjct: 169 KYGLEQKQFLEIAS-ALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKRVS 227

Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
            ++P+              G GDLD++A+ + +K
Sbjct: 228 ANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK 261



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>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)|
          Length = 290

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 30/109 (27%), Positives = 57/109 (52%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           I+  GD + +++ +P    +G+K    G  G+G  +KL   ++ G    A +E + L+++
Sbjct: 139 IMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQ 198

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRL 269
            G++P+ ++D    GA  +       P M +  + P F +KH  KD+RL
Sbjct: 199 LGIAPELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLKDLRL 247



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>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)|
          Length = 298

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419
           +LA G     +   P    +G +    G  G G ++KL+ N  M   +NA S E   L +
Sbjct: 135 LLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242
             GLS    L V+   A     F    P+ +++G  +PAF +    KD+ +AL + ++  
Sbjct: 194 ALGLSFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQLH 253

Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           V MP+          AR+ G G  D+SA+ E ++
Sbjct: 254 VPMPLGAASREVYNLARAAGRGREDWSAILEQVR 287



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>Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.-.-)|
          Length = 301

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGE-MGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 419
           ++A+G K  ++ + P  D    K + +GE +G GA +K+V  ++ G  + A +E + LA 
Sbjct: 140 VMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALAS 199

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 239
           K+G+    + DV+   A  + MF+ +   +++G Y P   +    KD+ L          
Sbjct: 200 KAGIPLDVMYDVVTNAAGNSWMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLHF 259

Query: 238 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 146
            + +          A + G G  D SAV ++
Sbjct: 260 PLHLASTAYSMFTEASNAGYGKEDDSAVIKI 290



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>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region|
           (Fragment)
          Length = 194

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 31/123 (25%), Positives = 58/123 (47%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           ++  GD+A +D + P           LG +G G   K+V  + +  ++   +EGL  A  
Sbjct: 40  VMMGGDQAHFDTVKPVISAYSCAEL-LGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKS 98

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 236
           +GL    +++V+  G   +   + +  +M QG Y+  F +   +KD+ +AL     N   
Sbjct: 99  AGLDGLKVIEVISKGRAQSWQMENRYKTMWQGQYDFGFAIDWMRKDLGIALDEARRNGSH 158

Query: 235 MPV 227
           +PV
Sbjct: 159 LPV 161



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>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)|
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419
           +LA G     +   P    +G +    G  G G ++KL+ N  M   +NA S E   L +
Sbjct: 135 LLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242
              L     + V+   A     F    P+ +L G  +PAF +    KD+ +AL + ++  
Sbjct: 194 ALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH 253

Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           V MP+          AR+ G G  D+SA+ E ++
Sbjct: 254 VPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287



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>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)|
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLAD 419
           +LA G     +   P    +G +    G  G G ++KL+ N  M   +NA S E   L +
Sbjct: 135 LLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLCE 193

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDENA 242
              L     + V+   A     F    P+ +L G  +PAF +    KD+ +AL + ++  
Sbjct: 194 ALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH 253

Query: 241 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           V MP+          AR+ G G  D+SA+ E ++
Sbjct: 254 VPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287



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>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 347

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 12/158 (7%)
 Frame = -2

Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413
           +  G +  Y    P    +G+ S + G  GNG+  K+  N+ M   M   SE L L    
Sbjct: 184 MVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSL 243

Query: 412 GLSPQTLLDVLDLGA-------IANPMFKMKGPSMLQG-----SYNPAFPLKHQQKDMRL 269
           G+S  TL +VL+  +         NP+     P +++G      YN  F  K   KD+ L
Sbjct: 244 GISASTLTEVLNTSSGRCWSSDAYNPV-----PGVMKGVPSSRDYNGGFASKLMAKDLNL 298

Query: 268 ALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAV 155
           A +  +E     P+              G    DFS V
Sbjct: 299 AAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCV 336



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>YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)|
          Length = 302

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLG-EMGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 419
           ++A+G    ++ + P  + +  K + +G E G G+ +K++  ++ G  + A +E + LA 
Sbjct: 141 VMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAA 200

Query: 418 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 239
           ++G+    + DV+   A  + MF+ +   ++ G Y P   +    KD+ L          
Sbjct: 201 RAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHF 260

Query: 238 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 146
            +P+          A + G G  D SAV ++
Sbjct: 261 PLPLASTALNMFTSASNAGYGKEDDSAVIKI 291



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>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)|
           (HIBADH)
          Length = 294

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%)
 Frame = -2

Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413
           +  GD++      P  + +  K    G  G G   K+  NM++     A +E   LA+K 
Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192

Query: 412 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 257
           GLS Q+L DV+  GA  N         + GP   S     + P F      KD+ LA+  
Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251

Query: 256 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
                 + P+            +    DLDFSAV   L+
Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289



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>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)|
           (HIBADH)
          Length = 294

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%)
 Frame = -2

Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413
           +  GD++      P  + +  K    G  G G   K+  NM++     A +E   LA+K 
Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192

Query: 412 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 257
           GLS Q+L DV+  GA  N         + GP   S     + P F      KD+ LA+  
Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251

Query: 256 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
                 + P+            +    DLDFSAV   L+
Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289



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>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 324

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
 Frame = -2

Query: 592 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 413
           +  G +A Y+ +    + +GKK    G  G G   KL  NM++   M   SE + LA + 
Sbjct: 161 MVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQ 220

Query: 412 GLSPQTLLDVLD-------LGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLG 254
           GL      ++++          I NP+  +   +     Y   F      KD+ LA  + 
Sbjct: 221 GLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVA 280

Query: 253 DENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           + +   +P+              GLG+ DFS V++++K
Sbjct: 281 NASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMK 318



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>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)|
          Length = 298

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
 Frame = -2

Query: 553 PAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDL 374
           P  + +G+  F  G+ G G   K+  NM++G +M   +E L L  K+GL P  L +V+  
Sbjct: 149 PVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQ 208

Query: 373 GAIANPMFKMKGP-------SMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPV 227
            +  N    +  P       +     Y   F ++   KD+ LAL+       S P+
Sbjct: 209 SSGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPL 264



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>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 335

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 7/140 (5%)
 Frame = -2

Query: 538 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 368
           +G    + G +G+G   K+  NM++   M   +E + L  +SGL P+ L  +L++ +   
Sbjct: 191 MGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRC 250

Query: 367 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 200
                 NP+  +        +Y   F      KD+ LA          + +         
Sbjct: 251 WSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYR 310

Query: 199 XARSLGLGDLDFSAVHEVLK 140
              S G    DFS+V + L+
Sbjct: 311 MMCSKGYSKKDFSSVFQYLR 330



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>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           (EC 1.1.1.31) (HIBADH)
          Length = 299

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 21/73 (28%), Positives = 37/73 (50%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           ++ AG+ A +        ++GK    LG +GNG   K+  NM++G  M A +E + L   
Sbjct: 136 MVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGIS 195

Query: 415 SGLSPQTLLDVLD 377
            GL  + L  +++
Sbjct: 196 MGLDAKALAGIVN 208



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>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 335

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 7/142 (4%)
 Frame = -2

Query: 544 DILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA- 368
           + +G    + G +G G   K+  NM++   M   +E + L  +SGL P+ L  +L++ + 
Sbjct: 189 ECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSG 248

Query: 367 ------IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXX 206
                   NP+  +        +Y   F      KD+ LA          + +       
Sbjct: 249 RCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSLAHQI 308

Query: 205 XXXARSLGLGDLDFSAVHEVLK 140
                S G    DFS+V + L+
Sbjct: 309 YRMMCSKGYSKKDFSSVFQYLR 330



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>Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (EC 1.1.-.-)|
          Length = 295

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
 Frame = -2

Query: 595 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 416
           ++   D   +  +   F          GE G G +MKL  NM+      A +E   LA+ 
Sbjct: 140 VMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEA 199

Query: 415 SGLSPQTLLDVLDLGAIANPMFKMKGPS---MLQGSYNPAFP-------LKHQ----QKD 278
            G      LD++ LG +        G +   M + +  P  P       L+H     +KD
Sbjct: 200 CG------LDLVALGKVVRHSDSFTGGAGAIMFRNTTAPMEPADPLRPLLEHTRGLGEKD 253

Query: 277 MRLALSLGDENAVSMPV 227
           + LAL+LG+  +V +P+
Sbjct: 254 LSLALALGEVVSVDLPL 270



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>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 336

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 7/140 (5%)
 Frame = -2

Query: 538 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 368
           +G    + G +G G   K+  NM++   M   +E + L  + GL P+ L  +L++ +   
Sbjct: 192 MGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRC 251

Query: 367 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 200
                 NP+  +        +Y   F      KD+ LA          + +         
Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311

Query: 199 XARSLGLGDLDFSAVHEVLK 140
              + G    DFS+V + L+
Sbjct: 312 MMCAKGYSKKDFSSVFQFLR 331



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>GATB_ANASP (Q8YX22) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 491

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = -2

Query: 568 YDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLL 389
           YD  V   D++  + F +  + +GA  K   N I   +    ++      + GL+P  L 
Sbjct: 332 YDTRVLTEDVIVSQYFEVA-IASGANPKAAANWITQDIAAYLNKQKLSITEIGLTPANLA 390

Query: 388 DV---LDLGAIANPMFKMKGPSMLQG 320
           DV   ++ G I+N   K K P +L G
Sbjct: 391 DVITRIETGKISNAQAKQKLPELLTG 416



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>RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1|
           protein homolog)
          Length = 2105

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = +2

Query: 401 GAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLL------PKYVKCRDHV 562
           G   T      S+G S   T  D + H+F  C ++ LP+ E+ +       K +K + HV
Sbjct: 620 GTDKTISKTPASVGNSTVTTRIDQLIHEFSHCGLTKLPENEKQISSSVASKKKMKSQQHV 679

Query: 563 I 565
           I
Sbjct: 680 I 680



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>PANX1_HUMAN (Q96RD7) Pannexin-1|
          Length = 426

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 428 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 586
           TE+LG+S+   S  H  +      +        L+ KY+ CR   +I  L+AC
Sbjct: 176 TENLGQSLWEVSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLAC 228



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>HBL1_CAEEL (Q9XYD3) Hunchback-like protein|
          Length = 982

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 423  AKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPS-MSNAGTMSSYSALSPAA 590
            A  SPS+   +  P   L +S I AP PI+P+ N+F  S ++ A  +    A  P+A
Sbjct: 874  APHSPSDTTSV--PSPPLHSSSIVAPIPITPQPNEFLQSILAQASLLGPLLANRPSA 928



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>CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein capD|
          Length = 599

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 576 RHYMMTWSLHLTYLGRSRSFW 514
           R Y +TW +HL  +G SR FW
Sbjct: 106 RLYFITWMMHLLLIGGSRLFW 126



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>RPOB_STRT2 (Q5M2F5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1193

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
 Frame = -2

Query: 565 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 449
           DD V A    DIL + S+FL              +GN    A  +L+ N     +  M  
Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
              E + + D   L+PQ ++++  + A     F     S     +NP   L H+++
Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489



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>RPOB_STRT1 (Q5LXV3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1193

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%)
 Frame = -2

Query: 565 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 449
           DD V A    DIL + S+FL              +GN    A  +L+ N     +  M  
Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
              E + + D   L+PQ ++++  + A     F     S     +NP   L H+++
Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489



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>PANX1_MOUSE (Q9JIP4) Pannexin-1|
          Length = 426

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +2

Query: 380 QDIKKRLGAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDH 559
           +D+  R G  P  V  TE++G+S+   S  H  +      +        L+ KY+ CR  
Sbjct: 161 RDLDLRDGPGPPGV--TENVGQSLWEISESHFKYPIVEQYLKTKKNSSHLIMKYISCRLV 218

Query: 560 VII*CLVAC 586
             +  L+AC
Sbjct: 219 TFVVILLAC 227



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>JSN1_YEAST (P47135) Protein JSN1 (Protein PUF1)|
          Length = 1091

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = -2

Query: 319 SYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 140
           S +  FPL+HQQ  +  A++L   +  ++             R+L +  ++FS+V   +K
Sbjct: 343 SISNVFPLQHQQPQLNNAINLTSTSLATLCSKYGEVISARTLRNLNMALVEFSSVESAVK 402



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>RPOB_XANCP (Q8PC56) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1387

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561



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>RPOB_XYLFT (Q87A32) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1388

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561



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>RPOB_XYLFA (Q9PA86) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1388

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 561



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>GATB_STRMU (Q8DSG6) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 479

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 523 FFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA 368
           FF   +  GA  K V N + G +    +      D+ GL+P+ L ++L L A
Sbjct: 328 FFESALAQGADAKAVSNWLQGDVAQYLNTENQTIDQIGLTPENLTEMLQLVA 379



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>RPOB_XANOR (Q5GWS6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1383

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557



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>RPOB_XANC5 (Q3BWZ1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1383

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557



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>RPOB_XANAC (Q8PNT0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1383

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 502 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRR 557



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>RPOB_XANC8 (Q4URD2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1387

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L +A+  GL+PQ L++   + A     F     S      NP   + H+++
Sbjct: 506 AVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSRFMDQNNPLSEVTHKRR 561



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>RPOB_HAEDU (Q7VKL7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1342

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -2

Query: 448 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 281
           A  E L L D  G++PQ L++   + A     F     S      NP   + H+++
Sbjct: 474 AVRERLSLGDLDGITPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRR 529


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,132,146
Number of Sequences: 219361
Number of extensions: 2067221
Number of successful extensions: 5113
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5107
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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