ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18o14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 404 bits (204), Expect = e-109 Identities = 369/424 (87%) Strand = Plus / Plus Query: 238 agcttttatgttaccaaggcttcagatctccaacaggcccagatgtccagttgagatgct 297 ||||||| | || |||||| ||||||||| | |||||||| | |||||||||||||||| Sbjct: 18992510 agcttttctatttccaaggtttcagatctgctacaggccccgcagtccagttgagatgct 18992569 Query: 298 tctcacctggctgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccattta 357 |||| ||||||| ||||||||| | |||||||| |||||||| ||||||||||| || | Sbjct: 18992570 tctcgcctggctttaagtatacactgtctgggtgtgggagcttccgagcaaggccgttga 18992629 Query: 358 gaatctgatggaatgcatctcttggttgcgctggctgcgggaacaacatggccttcttca 417 | |||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| Sbjct: 18992630 ggatctgatggaatgcatctctaggttgtgctggctgcggaaacaacatggcctgtttca 18992689 Query: 418 ttgatgggttggcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtga 477 ||||||| |||||||| |||||||||||||| |||||||||||||| ||||| || |||| Sbjct: 18992690 ttgatggattggcgagtaatctttgcttccttaggatatcatcaattgggatggatgtga 18992749 Query: 478 gaattgaatcaagctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaag 537 | ||||| || ||| |||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 18992750 ggattgagtctagccttggaacatcctcctcgtcaacaaaaacaccgatttcgtcccatg 18992809 Query: 538 ggattgcatcagcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaa 597 ||||||| |||||||| || ||||| || || ||||||||||| ||||||||||| || | Sbjct: 18992810 ggattgcgtcagcaaacggaagcacaatatcatcagctatgatgactggaatgcaaccga 18992869 Query: 598 ataccacagcctcaaccaacctaggactccatggtgcccaccccaacgggcataagcaga 657 | || |||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||| Sbjct: 18992870 aaactacagcctccaccaatctagggctccatggtgcccatcccaaggggcacaagcaga 18992929 Query: 658 agac 661 |||| Sbjct: 18992930 agac 18992933
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 404 bits (204), Expect = e-109 Identities = 369/424 (87%) Strand = Plus / Plus Query: 238 agcttttatgttaccaaggcttcagatctccaacaggcccagatgtccagttgagatgct 297 ||||||| | || |||||| ||||||||| | |||||||| | |||||||||||||||| Sbjct: 47831 agcttttctatttccaaggtttcagatctgctacaggccccgcagtccagttgagatgct 47890 Query: 298 tctcacctggctgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccattta 357 |||| ||||||| ||||||||| | |||||||| |||||||| ||||||||||| || | Sbjct: 47891 tctcgcctggctttaagtatacactgtctgggtgtgggagcttccgagcaaggccgttga 47950 Query: 358 gaatctgatggaatgcatctcttggttgcgctggctgcgggaacaacatggccttcttca 417 | |||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| Sbjct: 47951 ggatctgatggaatgcatctctaggttgtgctggctgcggaaacaacatggcctgtttca 48010 Query: 418 ttgatgggttggcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtga 477 ||||||| |||||||| |||||||||||||| |||||||||||||| ||||| || |||| Sbjct: 48011 ttgatggattggcgagtaatctttgcttccttaggatatcatcaattgggatggatgtga 48070 Query: 478 gaattgaatcaagctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaag 537 | ||||| || ||| |||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 48071 ggattgagtctagccttggaacatcctcctcgtcaacaaaaacaccgatttcgtcccatg 48130 Query: 538 ggattgcatcagcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaa 597 ||||||| |||||||| || ||||| || || ||||||||||| ||||||||||| || | Sbjct: 48131 ggattgcgtcagcaaacggaagcacaatatcatcagctatgatgactggaatgcaaccga 48190 Query: 598 ataccacagcctcaaccaacctaggactccatggtgcccaccccaacgggcataagcaga 657 | || |||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||| Sbjct: 48191 aaactacagcctccaccaatctagggctccatggtgcccatcccaaggggcacaagcaga 48250 Query: 658 agac 661 |||| Sbjct: 48251 agac 48254
>ref|XM_466000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 402 bits (203), Expect = e-109 Identities = 359/411 (87%) Strand = Plus / Minus Query: 251 ccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggctg 310 |||||| ||||||||| | |||||||| | |||||||||||||||||||| ||||||| Sbjct: 1299 ccaaggtttcagatctgctacaggccccgcagtccagttgagatgcttctcgcctggctt 1240 Query: 311 taagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatggaa 370 ||||||||| | |||||||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 1239 taagtatacactgtctgggtgtgggagcttccgagcaaggccgttgaggatctgatggaa 1180 Query: 371 tgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttggc 430 ||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct: 1179 tgcatctctaggttgtgctggctgcggaaacaacatggcctgtttcattgatggattggc 1120 Query: 431 gagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatcaag 490 ||| |||||||||||||| |||||||||||||| ||||| || ||||| ||||| || || Sbjct: 1119 gagtaatctttgcttccttaggatatcatcaattgggatggatgtgaggattgagtctag 1060 Query: 491 ctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagc 550 | |||| ||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1059 ccttggaacatcctcctcgtcaacaaaaacaccgatttcgtcccatgggattgcgtcagc 1000 Query: 551 aaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctc 610 ||| || ||||| || || ||||||||||| ||||||||||| || || || |||||||| Sbjct: 999 aaacggaagcacaatatcatcagctatgatgactggaatgcaaccgaaaactacagcctc 940 Query: 611 aaccaacctaggactccatggtgcccaccccaacgggcataagcagaagac 661 ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 939 caccaatctagggctccatggtgcccatcccaaggggcacaagcagaagac 889
>ref|XM_472344.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 1262 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 1203 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 1202 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 1143 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 1142 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 1083 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 1082 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 1023 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 1022 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 963 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 962 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 903 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 902 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 844 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 843 ctgcatgtcttcata 829
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 19701662 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 19701603 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 19701602 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 19701543 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 19701542 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 19701483 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 19701482 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 19701423 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 19701422 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 19701363 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 19701362 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 19701303 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 19701302 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 19701244 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 19701243 ctgcatgtcttcata 19701229
>dbj|AK107473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B06, full insert sequence Length = 2766 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 1451 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 1392 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 1391 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 1332 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 1331 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 1272 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 1271 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 1212 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 1211 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 1152 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 1151 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 1092 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 1091 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 1033 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 1032 ctgcatgtcttcata 1018
>dbj|AK073335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F13, full insert sequence Length = 1704 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 1510 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 1451 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 1450 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 1391 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 1390 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 1331 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 1330 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 1271 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 1270 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 1211 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 1210 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 1151 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 1150 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 1092 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 1091 ctgcatgtcttcata 1077
>dbj|AK059806.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G11, full insert sequence Length = 1146 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 952 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 893 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 892 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 833 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 832 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 773 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 772 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 713 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 712 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 653 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 652 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 593 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 592 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 534 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 533 ctgcatgtcttcata 519
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 315 bits (159), Expect = 1e-82 Identities = 367/435 (84%), Gaps = 1/435 (0%) Strand = Plus / Minus Query: 249 taccaaggcttcagatctccaacaggcccagatgtccagttgagatgcttctcacctggc 308 ||||||| ||||||||||||||||| |||| ||||||||||| |||| |||| || Sbjct: 152388 taccaagctttcagatctccaacaggtccagcagtccagttgaggcgcttgtcactgggt 152329 Query: 309 tgtaagtatacggtctctgggtgcgggagcttgcgagcaaggccatttagaatctgatgg 368 || |||||||| ||||||||| || |||||||||||||||||||| | ||||| ||| Sbjct: 152328 tgcaagtatactccctctgggtgtggaagcttgcgagcaaggccattcaagatctggtgg 152269 Query: 369 aatgcatctcttggttgcgctggctgcgggaacaacatggccttcttcattgatgggttg 428 || |||||||||||||| |||||||| || ||||||||||||| |||||||||||| || Sbjct: 152268 aacgcatctcttggttgggctggctgtggaaacaacatggcctgcttcattgatggattt 152209 Query: 429 gcgagcaatctttgcttcctcaggatatcatcaatcgggatagacgtgagaattgaatca 488 || |||||||||||||| || | ||||| || || || || || ||||| || | || Sbjct: 152208 gcaagcaatctttgctttcttaaaatatcgtcgattggcatcgatgtgaggatggtgtct 152149 Query: 489 agctttggcacatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatca 548 | |||||| ||||||| ||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 152148 aactttggaacatccttctcctcaacaaacacgccaatttcctcccaagggattgcatcg 152089 Query: 549 gcaaaaggcagcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcc 608 ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 152088 gcaaatggtagcacaatgtcgtcagcaatgatgactggaatgcagccaaagaccacagcc 152029 Query: 609 tcaaccaacctaggactccatggtgcccaccccaacgggcataagcagaagacgggcacg 668 |||||||||||||| |||||||||||||| ||||| ||||| | |||||||| ||||| Sbjct: 152028 tcaaccaacctagggctccatggtgcccagcccaatgggcacagacagaagac-agcacg 151970 Query: 669 ttgcatatcttcata 683 ||||| |||||||| Sbjct: 151969 ctgcatgtcttcata 151955
>gb|AY104835.1| Zea mays PCO128889 mRNA sequence Length = 965 Score = 260 bits (131), Expect = 5e-66 Identities = 287/339 (84%) Strand = Plus / Minus Query: 323 ctctgggtgcgggagcttgcgagcaaggccatttagaatctgatggaatgcatctcttgg 382 |||||||||||||||||| ||||||||||| || | || || ||||| || || ||||| Sbjct: 901 ctctgggtgcgggagcttccgagcaaggccgttcaagatttggtggaacgcgtcccttgg 842 Query: 383 ttgcgctggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttg 442 |||||||||||| ||||||||||| |||| |||||| ||||| || ||||| || ||||| Sbjct: 841 ttgcgctggctgtgggaacaacattgcctgcttcatcgatggatttgcgagtaacctttg 782 Query: 443 cttcctcaggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatc 502 |||||| | ||| ||||| || || || |||||||| || | ||||||||||| ||||| Sbjct: 781 cttccttaagatgtcatctataggcatcgacgtgaggatcgtgtcaagctttgggacatc 722 Query: 503 ctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcac 562 || ||| || ||||| || || ||||| ||||| ||||| || || ||||| || ||||| Sbjct: 721 cttctcctcgacaaagacgccgatttcctcccatgggatcgcgtccgcaaatggaagcac 662 Query: 563 gatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctagg 622 |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 661 gatgtcatcagctatgatgactggaatgcagccaaagaccacagcctcaaccaacctagg 602 Query: 623 actccatggtgcccaccccaacgggcataagcagaagac 661 ||||| |||||||| ||||| ||||| | ||||||||| Sbjct: 601 gctccacggtgcccagcccaatgggcacaggcagaagac 563
>gb|AY596523.1| Saccharum officinarum clone SCQGLR1019H07, complete sequence Length = 1928 Score = 113 bits (57), Expect = 8e-22 Identities = 135/161 (83%) Strand = Plus / Minus Query: 498 acatcctcctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggc 557 |||||||||||| |||| |||||||| || || ||||| ||||| || || ||||| || Sbjct: 1405 acatcctcctcagcaacgaaaacaccgatctcctcccatgggatggcgtccgcaaagggg 1346 Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 || |||||||| || || ||||| ||||| ||||||||||| ||||||||||| || | | Sbjct: 1345 aggacgatgtcatctgcaatgatcactgggatgcagccaaagaccacagcctccactagc 1286 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaa 658 || ||||||||||||||||| ||||| ||||| | |||||| Sbjct: 1285 ctgggactccatggtgcccagcccaatgggcagaggcagaa 1245 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 330 tgcgggagcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgct 389 |||||||||||||| || ||||||||||||||||| ||||||||||||| ||| || || Sbjct: 1573 tgcgggagcttgcgcgcgaggccatttagaatctggtggaatgcatctcctggctgagca 1514 Query: 390 ggctgcgggaacaacatggccttcttcattgatgggtt 427 ||||| ||||||| |||||||| |||||| |||||||| Sbjct: 1513 ggctgggggaacagcatggcctgcttcatcgatgggtt 1476
>ref|XM_463683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Minus Query: 336 agcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgctggctgc 395 ||||||||||| || ||||| || ||||||||||||||||||| || || || ||||| Sbjct: 1166 agcttgcgagcgagaccattcagtatctgatggaatgcatctcctgcctgagcaggctgg 1107 Query: 396 gggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctcaggata 455 ||||||| |||||||| |||||| || ||||| ||||| | || ||||||||||||||| Sbjct: 1106 gggaacagcatggcctgcttcatcgacgggttcgcgagaagcctctgcttcctcaggata 1047 Query: 456 tcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctcatcaaca 515 |||| | || || || || || || || ||||| || ||||||||||| | ||| Sbjct: 1046 acatctgttggtatggatgtcaggatactgtccagcttcggaacatcctcctcggcgaca 987 Query: 516 aaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtcagct 575 || || ||||| || ||||| ||||| ||||||||||| || || || ||||| || || Sbjct: 986 aacacgccaatctcctcccaggggatagcatcagcaaaggggaggacaatgtcatctgca 927 Query: 576 atgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggtgcc 635 ||||| || ||||| || || || |||||||| || |||| || || |||||||| ||| Sbjct: 926 atgatcaccggaatacaaccgaaaaccacagcttccaccagtctggggctccatggagcc 867 Query: 636 caccccaacgggcataagcagaa 658 || ||||| ||||| |||||||| Sbjct: 866 cagcccaatgggcacaagcagaa 844
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Plus Query: 336 agcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgctggctgc 395 ||||||||||| || ||||| || ||||||||||||||||||| || || || ||||| Sbjct: 40625843 agcttgcgagcgagaccattcagtatctgatggaatgcatctcctgcctgagcaggctgg 40625902 Query: 396 gggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctcaggata 455 ||||||| |||||||| |||||| || ||||| ||||| | || ||||||||||||||| Sbjct: 40625903 gggaacagcatggcctgcttcatcgacgggttcgcgagaagcctctgcttcctcaggata 40625962 Query: 456 tcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctcatcaaca 515 |||| | || || || || || || || ||||| || ||||||||||| | ||| Sbjct: 40625963 acatctgttggtatggatgtcaggatactgtccagcttcggaacatcctcctcggcgaca 40626022 Query: 516 aaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtcagct 575 || || ||||| || ||||| ||||| ||||||||||| || || || ||||| || || Sbjct: 40626023 aacacgccaatctcctcccaggggatagcatcagcaaaggggaggacaatgtcatctgca 40626082 Query: 576 atgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggtgcc 635 ||||| || ||||| || || || |||||||| || |||| || || |||||||| ||| Sbjct: 40626083 atgatcaccggaatacaaccgaaaaccacagcttccaccagtctggggctccatggagcc 40626142 Query: 636 caccccaacgggcataagcagaa 658 || ||||| ||||| |||||||| Sbjct: 40626143 cagcccaatgggcacaagcagaa 40626165 Score = 77.8 bits (39), Expect = 4e-11 Identities = 213/271 (78%) Strand = Plus / Plus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctc 449 ||||||||||||| |||||||| |||||| || ||||| || |||| || ||||||| | Sbjct: 40619287 ggctgcgggaacagcatggcctgcttcatcgacgggttcgctagcagcctctgcttccgc 40619346 Query: 450 aggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctca 509 ||||| |||| || || || || || || || | || |||||||| || || ||||| Sbjct: 40619347 aggatcacatccattggtatcgatgtcaggatggtgtccagctttgggacgtcgtcctcc 40619406 Query: 510 tcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcg 569 | ||||| ||||| || || ||||| ||||| || || |||||||| || || |||||| Sbjct: 40619407 gccacaaatacaccgatctcatcccacgggatcgcgtccgcaaaaggtaggacaatgtcg 40619466 Query: 570 tcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccat 629 || || ||||| |||||||||||||| || || || || |||||||||| || ||||| Sbjct: 40619467 tctgcaatgatcactggaatgcagccgaacacaacggcttcaaccaaccgggggctccac 40619526 Query: 630 ggtgcccaccccaacgggcataagcagaaga 660 || ||||| || | ||||| |||||||||| Sbjct: 40619527 ggagcccagcctagagggcacaagcagaaga 40619557 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 40608640 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 40608699 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 40608700 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 40608742
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Plus Query: 336 agcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgctggctgc 395 ||||||||||| || ||||| || ||||||||||||||||||| || || || ||||| Sbjct: 67821 agcttgcgagcgagaccattcagtatctgatggaatgcatctcctgcctgagcaggctgg 67880 Query: 396 gggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctcaggata 455 ||||||| |||||||| |||||| || ||||| ||||| | || ||||||||||||||| Sbjct: 67881 gggaacagcatggcctgcttcatcgacgggttcgcgagaagcctctgcttcctcaggata 67940 Query: 456 tcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctcatcaaca 515 |||| | || || || || || || || ||||| || ||||||||||| | ||| Sbjct: 67941 acatctgttggtatggatgtcaggatactgtccagcttcggaacatcctcctcggcgaca 68000 Query: 516 aaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtcagct 575 || || ||||| || ||||| ||||| ||||||||||| || || || ||||| || || Sbjct: 68001 aacacgccaatctcctcccaggggatagcatcagcaaaggggaggacaatgtcatctgca 68060 Query: 576 atgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggtgcc 635 ||||| || ||||| || || || |||||||| || |||| || || |||||||| ||| Sbjct: 68061 atgatcaccggaatacaaccgaaaaccacagcttccaccagtctggggctccatggagcc 68120 Query: 636 caccccaacgggcataagcagaa 658 || ||||| ||||| |||||||| Sbjct: 68121 cagcccaatgggcacaagcagaa 68143 Score = 77.8 bits (39), Expect = 4e-11 Identities = 213/271 (78%) Strand = Plus / Plus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctc 449 ||||||||||||| |||||||| |||||| || ||||| || |||| || ||||||| | Sbjct: 61265 ggctgcgggaacagcatggcctgcttcatcgacgggttcgctagcagcctctgcttccgc 61324 Query: 450 aggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctca 509 ||||| |||| || || || || || || || | || |||||||| || || ||||| Sbjct: 61325 aggatcacatccattggtatcgatgtcaggatggtgtccagctttgggacgtcgtcctcc 61384 Query: 510 tcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcg 569 | ||||| ||||| || || ||||| ||||| || || |||||||| || || |||||| Sbjct: 61385 gccacaaatacaccgatctcatcccacgggatcgcgtccgcaaaaggtaggacaatgtcg 61444 Query: 570 tcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccat 629 || || ||||| |||||||||||||| || || || || |||||||||| || ||||| Sbjct: 61445 tctgcaatgatcactggaatgcagccgaacacaacggcttcaaccaaccgggggctccac 61504 Query: 630 ggtgcccaccccaacgggcataagcagaaga 660 || ||||| || | ||||| |||||||||| Sbjct: 61505 ggagcccagcctagagggcacaagcagaaga 61535 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 50618 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 50677 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 50678 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 50720
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Plus Query: 336 agcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgctggctgc 395 ||||||||||| || ||||| || ||||||||||||||||||| || || || ||||| Sbjct: 105858 agcttgcgagcgagaccattcagtatctgatggaatgcatctcctgcctgagcaggctgg 105917 Query: 396 gggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctcaggata 455 ||||||| |||||||| |||||| || ||||| ||||| | || ||||||||||||||| Sbjct: 105918 gggaacagcatggcctgcttcatcgacgggttcgcgagaagcctctgcttcctcaggata 105977 Query: 456 tcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctcatcaaca 515 |||| | || || || || || || || ||||| || ||||||||||| | ||| Sbjct: 105978 acatctgttggtatggatgtcaggatactgtccagcttcggaacatcctcctcggcgaca 106037 Query: 516 aaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtcagct 575 || || ||||| || ||||| ||||| ||||||||||| || || || ||||| || || Sbjct: 106038 aacacgccaatctcctcccaggggatagcatcagcaaaggggaggacaatgtcatctgca 106097 Query: 576 atgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggtgcc 635 ||||| || ||||| || || || |||||||| || |||| || || |||||||| ||| Sbjct: 106098 atgatcaccggaatacaaccgaaaaccacagcttccaccagtctggggctccatggagcc 106157 Query: 636 caccccaacgggcataagcagaa 658 || ||||| ||||| |||||||| Sbjct: 106158 cagcccaatgggcacaagcagaa 106180 Score = 77.8 bits (39), Expect = 4e-11 Identities = 213/271 (78%) Strand = Plus / Plus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctc 449 ||||||||||||| |||||||| |||||| || ||||| || |||| || ||||||| | Sbjct: 99302 ggctgcgggaacagcatggcctgcttcatcgacgggttcgctagcagcctctgcttccgc 99361 Query: 450 aggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctca 509 ||||| |||| || || || || || || || | || |||||||| || || ||||| Sbjct: 99362 aggatcacatccattggtatcgatgtcaggatggtgtccagctttgggacgtcgtcctcc 99421 Query: 510 tcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcg 569 | ||||| ||||| || || ||||| ||||| || || |||||||| || || |||||| Sbjct: 99422 gccacaaatacaccgatctcatcccacgggatcgcgtccgcaaaaggtaggacaatgtcg 99481 Query: 570 tcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccat 629 || || ||||| |||||||||||||| || || || || |||||||||| || ||||| Sbjct: 99482 tctgcaatgatcactggaatgcagccgaacacaacggcttcaaccaaccgggggctccac 99541 Query: 630 ggtgcccaccccaacgggcataagcagaaga 660 || ||||| || | ||||| |||||||||| Sbjct: 99542 ggagcccagcctagagggcacaagcagaaga 99572 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 88655 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 88714 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 88715 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 88757
>ref|NM_125578.2| Arabidopsis thaliana catalytic AT5G61840 mRNA, complete cds Length = 1672 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 1227 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 1168 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 1167 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 1108 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 1107 ccatggggcccatccaagtgggcataggcagaaga 1073
>gb|AY066039.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1248 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 990 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 931 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 930 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 871 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 870 ccatggggcccatccaagtgggcataggcagaaga 836
>gb|AY054180.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1664 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 1221 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 1162 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 1161 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 1102 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 1101 ccatggggcccatccaagtgggcataggcagaaga 1067
>emb|BX831082.1|CNS0A0UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 1207 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 1148 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 1147 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 1088 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 1087 ccatggggcccatccaagtgggcataggcagaaga 1053
>gb|AY087390.1| Arabidopsis thaliana clone 34861 mRNA, complete sequence Length = 1670 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 1227 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 1168 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 1167 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 1108 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 1107 ccatggggcccatccaagtgggcataggcagaaga 1073
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9 Length = 57246 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 45056 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 45115 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 45116 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 45175 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 45176 ccatggggcccatccaagtgggcataggcagaaga 45210
>dbj|AB080693.1| Arabidopsis thaliana AtGUT1 mRNA for NpGUT1 homolog, complete cds Length = 1026 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 768 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 709 Query: 566 gtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggact 625 |||||| |||||||| || || ||||| || |||| ||| || || |||| || ||||| Sbjct: 708 gtcgtctgctatgatcacagggatgcaaccgaatatcactgcttccaccagtcttggact 649 Query: 626 ccatggtgcccaccccaacgggcataagcagaaga 660 |||||| ||||| || | ||||||| |||||||| Sbjct: 648 ccatggggcccatccaagtgggcataggcagaaga 614
>dbj|AB128823.1| Nicotiana tabacum NtGUT1 gene for NpGUT1 homolog, partial cds Length = 1111 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 513 acaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtca 572 ||||| || ||||| || ||||| ||||||||||||||||| |||| || ||||| || Sbjct: 920 acaaacacgccaatatcttcccaggggattgcatcagcaaatggcaagacaatgtcatct 861 Query: 573 gctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggt 632 ||||| ||||| || ||||||||||||| || || |||||||| || |||||||||||| Sbjct: 860 gctataataacagggatgcagccaaatataactgcttcaaccaatcttggactccatggt 801 Query: 633 gcccacccca 642 |||||||||| Sbjct: 800 gcccacccca 791
>dbj|AB080676.1| Nicotiana plumbaginifolia NpGUT1 mRNA for pectin-glucuronyltransferase, complete cds Length = 1280 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Minus Query: 513 acaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtca 572 ||||| || ||||| || ||||| ||||||||||||||||| |||| || ||||| || Sbjct: 761 acaaacacgccaatatcttcccacgggattgcatcagcaaatggcaagacaatgtcatct 702 Query: 573 gctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggt 632 ||||| ||||| || ||||||||||||| || || |||||||| || ||||||||||| Sbjct: 701 gctataataacagggatgcagccaaatataactgcttcaaccaatctcggactccatggg 642 Query: 633 gcccaccccaacgggcataagcagaaga 660 |||||||||| ||||| ||||| |||| Sbjct: 641 gcccaccccagtgggcacaagcaaaaga 614
>ref|NM_102508.2| Arabidopsis thaliana catalytic AT1G27440 mRNA, complete cds Length = 1525 Score = 93.7 bits (47), Expect = 7e-16 Identities = 107/127 (84%) Strand = Plus / Minus Query: 511 caacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgt 570 ||||||| || || ||||| ||||| ||||| || || || |||||||| || ||||||| Sbjct: 1138 caacaaagactcctatttcttcccaggggatggcgtctgcgaaaggcagtactatgtcgt 1079 Query: 571 cagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatg 630 | |||||||||||||||||||| ||||| || || || ||||| |||||||| ||||||| Sbjct: 1078 ctgctatgataactggaatgcacccaaacacaactgcttcaactaacctagggctccatg 1019 Query: 631 gtgccca 637 | ||||| Sbjct: 1018 gagccca 1012
>gb|BT025555.1| Arabidopsis thaliana At1g27440 mRNA, complete cds Length = 1239 Score = 93.7 bits (47), Expect = 7e-16 Identities = 107/127 (84%) Strand = Plus / Minus Query: 511 caacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgt 570 ||||||| || || ||||| ||||| ||||| || || || |||||||| || ||||||| Sbjct: 976 caacaaagactcctatttcttcccaggggatggcgtctgcgaaaggcagtactatgtcgt 917 Query: 571 cagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatg 630 | |||||||||||||||||||| ||||| || || || ||||| |||||||| ||||||| Sbjct: 916 ctgctatgataactggaatgcacccaaacacaactgcttcaactaacctagggctccatg 857 Query: 631 gtgccca 637 | ||||| Sbjct: 856 gagccca 850
>gb|BT022053.1| Arabidopsis thaliana At1g27440 gene, complete cds Length = 1424 Score = 93.7 bits (47), Expect = 7e-16 Identities = 107/127 (84%) Strand = Plus / Minus Query: 511 caacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgt 570 ||||||| || || ||||| ||||| ||||| || || || |||||||| || ||||||| Sbjct: 1093 caacaaagactcctatttcttcccaggggatggcgtctgcgaaaggcagtactatgtcgt 1034 Query: 571 cagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatg 630 | |||||||||||||||||||| ||||| || || || ||||| |||||||| ||||||| Sbjct: 1033 ctgctatgataactggaatgcacccaaacacaactgcttcaactaacctagggctccatg 974 Query: 631 gtgccca 637 | ||||| Sbjct: 973 gagccca 967
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 93.7 bits (47), Expect = 7e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 511 caacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgt 570 ||||||| || || ||||| ||||| ||||| || || || |||||||| || ||||||| Sbjct: 73413 caacaaagactcctatttcttcccaggggatggcgtctgcgaaaggcagtactatgtcgt 73472 Query: 571 cagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatg 630 | |||||||||||||||||||| ||||| || || || ||||| |||||||| ||||||| Sbjct: 73473 ctgctatgataactggaatgcacccaaacacaactgcttcaactaacctagggctccatg 73532 Query: 631 gtgccca 637 | ||||| Sbjct: 73533 gagccca 73539
>dbj|AK220976.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-57-H08 Length = 523 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 506 ctcatcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgat 565 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| | |||||| Sbjct: 89 ctcatccacaaacacaccaatatcttcccaagggattgcatctgcaaaaggtaacacgat 30 Query: 566 gtcgtcagctatgat 580 |||||| |||||||| Sbjct: 29 gtcgtctgctatgat 15
>gb|AY935506.1| Populus tremula x Populus tremuloides secondary cell wall-related glycosyltransferase family 47 mRNA, complete cds Length = 1429 Score = 81.8 bits (41), Expect = 3e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 513 acaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcgtca 572 ||||| || |||||||| ||||| ||||| ||||| ||||| |||| || ||||| || Sbjct: 1014 acaaacaccccaatttcctcccatgggatagcatcggcaaatggcaaaacaatgtcatct 955 Query: 573 gctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccatggt 632 |||||||| || |||||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct: 954 gctatgatgacaggaatgcatccaaataccactgcttcaactaatctagggctccatgga 895 Query: 633 gccca 637 ||||| Sbjct: 894 gccca 890
>ref|XM_463682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 77.8 bits (39), Expect = 4e-11 Identities = 213/271 (78%) Strand = Plus / Minus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctc 449 ||||||||||||| |||||||| |||||| || ||||| || |||| || ||||||| | Sbjct: 1106 ggctgcgggaacagcatggcctgcttcatcgacgggttcgctagcagcctctgcttccgc 1047 Query: 450 aggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctca 509 ||||| |||| || || || || || || || | || |||||||| || || ||||| Sbjct: 1046 aggatcacatccattggtatcgatgtcaggatggtgtccagctttgggacgtcgtcctcc 987 Query: 510 tcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcg 569 | ||||| ||||| || || ||||| ||||| || || |||||||| || || |||||| Sbjct: 986 gccacaaatacaccgatctcatcccacgggatcgcgtccgcaaaaggtaggacaatgtcg 927 Query: 570 tcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccat 629 || || ||||| |||||||||||||| || || || || |||||||||| || ||||| Sbjct: 926 tctgcaatgatcactggaatgcagccgaacacaacggcttcaaccaaccgggggctccac 867 Query: 630 ggtgcccaccccaacgggcataagcagaaga 660 || ||||| || | ||||| |||||||||| Sbjct: 866 ggagcccagcctagagggcacaagcagaaga 836
>gb|BT018089.1| Zea mays clone EL01N0552D06.c mRNA sequence Length = 1163 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| ||| Sbjct: 563 acgatgtcgtctgcgatgatcaccgggatgcagccgaagaccacggcctccaccagcctg 504 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagacgg 663 |||||||| |||||||| ||||||||||| | |||||| |||| Sbjct: 503 ggactccacggtgcccagcccaacgggcagaggcagaacacgg 461 Score = 69.9 bits (35), Expect = 1e-08 Identities = 101/123 (82%) Strand = Plus / Minus Query: 329 gtgcgggagcttgcgagcaaggccatttagaatctgatggaatgcatctcttggttgcgc 388 ||||||||||||||| || || || || |||||||| ||||| || |||| || ||| || Sbjct: 795 gtgcgggagcttgcgcgcgagaccgttcagaatctggtggaacgcgtctcctgcttgagc 736 Query: 389 tggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcct 448 ||||| ||||||| |||||||| |||||| || ||||| ||||| | | ||||||||| Sbjct: 735 aggctgtgggaacagcatggcctgcttcatagacgggttcgcgaggagccgttgcttcct 676 Query: 449 cag 451 ||| Sbjct: 675 cag 673
>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full insert sequence Length = 1739 Score = 77.8 bits (39), Expect = 4e-11 Identities = 213/271 (78%) Strand = Plus / Minus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagcaatctttgcttcctc 449 ||||||||||||| |||||||| |||||| || ||||| || |||| || ||||||| | Sbjct: 1246 ggctgcgggaacagcatggcctgcttcatcgacgggttcgctagcagcctctgcttccgc 1187 Query: 450 aggatatcatcaatcgggatagacgtgagaattgaatcaagctttggcacatcctcctca 509 ||||| |||| || || || || || || || | || |||||||| || || ||||| Sbjct: 1186 aggatcacatccattggtatcgatgtcaggatggtgtccagctttgggacgtcgtcctcc 1127 Query: 510 tcaacaaaaacaccaatttcgtcccaagggattgcatcagcaaaaggcagcacgatgtcg 569 | ||||| ||||| || || ||||| ||||| || || |||||||| || || |||||| Sbjct: 1126 gccacaaatacaccgatctcatcccacgggatcgcgtccgcaaaaggtaggacaatgtcg 1067 Query: 570 tcagctatgataactggaatgcagccaaataccacagcctcaaccaacctaggactccat 629 || || ||||| |||||||||||||| || || || || |||||||||| || ||||| Sbjct: 1066 tctgcaatgatcactggaatgcagccgaacacaacggcttcaaccaaccgggggctccac 1007 Query: 630 ggtgcccaccccaacgggcataagcagaaga 660 || ||||| || | ||||| |||||||||| Sbjct: 1006 ggagcccagcctagagggcacaagcagaaga 976
>ref|NM_195174.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0047G15.26), mRNA Length = 1206 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | | Sbjct: 893 acgatgtcgtctgcgatgatcaccgggatgcagccgaacaccacggcctccaccagacga 834 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagac 661 || |||||||| ||||| |||| |||||| | ||||||||| Sbjct: 833 gggctccatggcgcccagcccagcgggcacaggcagaagac 793
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | | Sbjct: 143662 acgatgtcgtctgcgatgatcaccgggatgcagccgaacaccacggcctccaccagacga 143721 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagac 661 || |||||||| ||||| |||| |||||| | ||||||||| Sbjct: 143722 gggctccatggcgcccagcccagcgggcacaggcagaagac 143762
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | | Sbjct: 5138361 acgatgtcgtctgcgatgatcaccgggatgcagccgaacaccacggcctccaccagacga 5138420 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagac 661 || |||||||| ||||| |||| |||||| | ||||||||| Sbjct: 5138421 gggctccatggcgcccagcccagcgggcacaggcagaagac 5138461
>dbj|AK109393.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A02, full insert sequence Length = 1379 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | | Sbjct: 729 acgatgtcgtctgcgatgatcaccgggatgcagccgaacaccacggcctccaccagacga 670 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagac 661 || |||||||| ||||| |||| |||||| | ||||||||| Sbjct: 669 gggctccatggcgcccagcccagcgggcacaggcagaagac 629
>dbj|AK070803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069D21, full insert sequence Length = 1744 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | | Sbjct: 1088 acgatgtcgtctgcgatgatcaccgggatgcagccgaacaccacggcctccaccagacga 1029 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagac 661 || |||||||| ||||| |||| |||||| | ||||||||| Sbjct: 1028 gggctccatggcgcccagcccagcgggcacaggcagaagac 988
>ref|XM_463681.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 959 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 900 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 899 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 857
>dbj|AK073976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076M19, full insert sequence Length = 1853 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 1302 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 1243 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 1242 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 1200
>dbj|AK072752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D17, full insert sequence Length = 1244 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 667 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 608 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 607 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 565
>dbj|AK063916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B02, full insert sequence Length = 1621 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 558 agcacgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaac 617 |||||||||||||| || ||||| || || ||||| || || ||||| ||||| |||| | Sbjct: 1064 agcacgatgtcgtcggcgatgatcaccgggatgcacccgaacaccaccgcctccaccagc 1005 Query: 618 ctaggactccatggtgcccaccccaacgggcataagcagaaga 660 | || ||||| || |||||||||| |||||| | |||||||| Sbjct: 1004 cgggggctccacggcgcccaccccagcgggcacaggcagaaga 962
>ref|NM_122200.3| Arabidopsis thaliana catalytic AT5G22940 mRNA, complete cds Length = 1956 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 618 ctaggactccatggtgcccaccc 640 ||||||||||||||||||||||| Sbjct: 1329 ctaggactccatggtgcccaccc 1307
>gb|BT014962.1| Arabidopsis thaliana At5g22940 gene, complete cds Length = 1410 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 618 ctaggactccatggtgcccaccc 640 ||||||||||||||||||||||| Sbjct: 1070 ctaggactccatggtgcccaccc 1048
>gb|BT011629.1| Arabidopsis thaliana At5g22940 mRNA, complete cds Length = 1827 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 618 ctaggactccatggtgcccaccc 640 ||||||||||||||||||||||| Sbjct: 1293 ctaggactccatggtgcccaccc 1271
>emb|BX833562.1|CNS0A1VD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 712 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 618 ctaggactccatggtgcccaccc 640 ||||||||||||||||||||||| Sbjct: 137 ctaggactccatggtgcccaccc 115
>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17 Length = 86065 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 618 ctaggactccatggtgcccaccc 640 ||||||||||||||||||||||| Sbjct: 73036 ctaggactccatggtgcccaccc 73014
>gb|AY107251.1| Zea mays PCO120698 mRNA sequence Length = 1033 Score = 46.1 bits (23), Expect = 0.15 Identities = 83/103 (80%) Strand = Plus / Minus Query: 561 acgatgtcgtcagctatgataactggaatgcagccaaataccacagcctcaaccaaccta 620 ||||||||||| || ||||| || || |||||||| || ||||| ||||| |||| | Sbjct: 440 acgatgtcgtcggcgatgatcaccgggatgcagccgaacaccaccgcctccaccagacgg 381 Query: 621 ggactccatggtgcccaccccaacgggcataagcagaagacgg 663 || ||||| || ||||| |||| |||||| | ||||||||||| Sbjct: 380 gggctccacggggcccagcccagcgggcacaggcagaagacgg 338 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 390 ggctgcgggaacaacatggccttcttcattgatgggttggcgagca 435 ||||||||||||| |||||||| |||||| || || || ||||||| Sbjct: 611 ggctgcgggaacagcatggcctgcttcatggacggattcgcgagca 566
>gb|AC147997.3| Mus musculus BAC clone RP24-196D17 from chromosome 18, complete sequence Length = 166172 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 ttaatttctttacttctttat 62 ||||||||||||||||||||| Sbjct: 11954 ttaatttctttacttctttat 11934
>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 accaggtcttgtaaggaagct 241 ||||||||||||||||||||| Sbjct: 147463 accaggtcttgtaaggaagct 147443
>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence Length = 150235 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 accaggtcttgtaaggaagct 241 ||||||||||||||||||||| Sbjct: 29749 accaggtcttgtaaggaagct 29769
>gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complete sequence Length = 188158 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 accaggtcttgtaaggaagct 241 ||||||||||||||||||||| Sbjct: 76808 accaggtcttgtaaggaagct 76788
>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence Length = 205242 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 accaggtcttgtaaggaagct 241 ||||||||||||||||||||| Sbjct: 77363 accaggtcttgtaaggaagct 77383
>gb|AC122823.2| Mus musculus BAC clone RP23-205I22 from 18, complete sequence Length = 203725 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 ttaatttctttacttctttat 62 ||||||||||||||||||||| Sbjct: 34590 ttaatttctttacttctttat 34610
>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence Length = 201990 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 accaggtcttgtaaggaagct 241 ||||||||||||||||||||| Sbjct: 19209 accaggtcttgtaaggaagct 19229
>gb|AC102031.7| Mus musculus chromosome 3, clone RP23-14C8, complete sequence Length = 181179 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 taatttctttacttctttata 63 ||||||||||||||||||||| Sbjct: 96771 taatttctttacttctttata 96791
>emb|AL603758.3| Human DNA sequence from clone RP11-529O20 on chromosome X Contains an olfactory receptor, family 2, subfamily J, member 3 (OR2J3) pseudogene, complete sequence Length = 50887 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 acaatttttagtcgagtgaca 118 ||||||||||||||||||||| Sbjct: 13869 acaatttttagtcgagtgaca 13889
>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence Length = 222457 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 tttaatttctttacttcttta 61 ||||||||||||||||||||| Sbjct: 75559 tttaatttctttacttcttta 75539
>emb|BX276095.7| Zebrafish DNA sequence from clone CH211-225H17, complete sequence Length = 197554 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 atattgtataattctatggat 161 ||||||||||||||||||||| Sbjct: 139739 atattgtataattctatggat 139759
>emb|AL161662.6|CNS01RH6 Human chromosome 14 DNA sequence BAC R-439L12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197369 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 504 tcctcatcaacaaaaacaccaattt 528 |||||| |||||||||||||||||| Sbjct: 118195 tcctcaacaacaaaaacaccaattt 118219
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ctcgtttaatttctttacttc 57 ||||||||||||||||||||| Sbjct: 1087678 ctcgtttaatttctttacttc 1087658
>gb|L34265.1|DROEST6D Drosophila simulans (strain sim-3) esterase 6 (Est-6) gene, complete cds Length = 3487 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 catcctcctcatcaacaaaaacacc 523 |||||||||||||||||| |||||| Sbjct: 390 catcctcctcatcaacaacaacacc 366
>ref|XM_510279.1| PREDICTED: Pan troglodytes similar to piggyBac transposable element derived 4 (LOC453299), mRNA Length = 952 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ccatttagaatctgatggaa 370 |||||||||||||||||||| Sbjct: 111 ccatttagaatctgatggaa 130
>ref|NM_146649.1| Mus musculus olfactory receptor 1160 (Olfr1160), mRNA Length = 960 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tgcttctcacctggctgtaa 313 |||||||||||||||||||| Sbjct: 747 tgcttctcacctggctgtaa 766
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gttgcgctggctgcgggaac 401 |||||||||||||||||||| Sbjct: 3169056 gttgcgctggctgcgggaac 3169075
>gb|AC087861.2| Felis catus clone RP86-49M22, complete sequence Length = 107365 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcctcctcatcaacaaaaac 520 |||||||||||||||||||| Sbjct: 72921 tcctcctcatcaacaaaaac 72902
>gb|AY368235.2| Burkholderia cepacia phage Bcep43, complete genome Length = 48024 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 caacgttacaaccggttacg 89 |||||||||||||||||||| Sbjct: 21978 caacgttacaaccggttacg 21959
>gb|AF543311.2| Burkholderia cepacia phage Bcep781, complete genome Length = 48247 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 caacgttacaaccggttacg 89 |||||||||||||||||||| Sbjct: 21982 caacgttacaaccggttacg 21963
>gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome 15, complete sequence Length = 152947 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 atcaacaaaaccaggtcttg 231 |||||||||||||||||||| Sbjct: 149162 atcaacaaaaccaggtcttg 149143
>gb|AC158915.4| Mus musculus chromosome 8, clone RP23-146N20, complete sequence Length = 207367 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 gtttaatttctttacttctttata 63 |||||||||||| ||||||||||| Sbjct: 192299 gtttaatttcttaacttctttata 192322
>ref|NM_152595.3| Homo sapiens piggyBac transposable element derived 4 (PGBD4), mRNA Length = 3908 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ccatttagaatctgatggaa 370 |||||||||||||||||||| Sbjct: 625 ccatttagaatctgatggaa 644
>gb|AY915809.1| Schistosoma japonicum SJCHGC09736 protein mRNA, complete cds Length = 503 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 catcctcctcatcaacaaaaacac 522 ||||||| |||||||||||||||| Sbjct: 210 catcctcatcatcaacaaaaacac 187
>gb|AY318360.1| Mus musculus olfactory receptor Olfr1160 (Olfr1160) gene, complete cds Length = 933 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tgcttctcacctggctgtaa 313 |||||||||||||||||||| Sbjct: 720 tgcttctcacctggctgtaa 739
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 ttatgttaccaaggcttcagatctccaa 270 ||||||||||||||||||| ||||||| Sbjct: 114319 ttatgttaccaaggcttcacttctccaa 114346
>ref|XM_532552.2| PREDICTED: Canis familiaris similar to Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) (LOC475325), mRNA Length = 842 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tctccaacaggcccagatgt 283 |||||||||||||||||||| Sbjct: 157 tctccaacaggcccagatgt 138
>gb|AC079203.9| Homo sapiens chromosome 15, clone RP11-1084A12, complete sequence Length = 197568 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ccatttagaatctgatggaa 370 |||||||||||||||||||| Sbjct: 38974 ccatttagaatctgatggaa 38993
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 agaaaggcaataaaagaaac 196 |||||||||||||||||||| Sbjct: 3755 agaaaggcaataaaagaaac 3736
>ref|XM_776898.1| PREDICTED: Strongylocentrotus purpuratus similar to cubilin (LOC576610), partial mRNA Length = 3482 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 aaggcagcacgatgtcgtcagcta 576 ||||||||||||||||||| |||| Sbjct: 3287 aaggcagcacgatgtcgtctgcta 3310
>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence Length = 190293 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 ttatgttaccaaggcttcagatctccaa 270 ||||||||||||||||||| ||||||| Sbjct: 7939 ttatgttaccaaggcttcacttctccaa 7966
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel Leucine Rich Repeat domain-containing protein (4930449E07Rik), the Atpaf2 gene for ATP synthase mitochondrial F1 complex assembly factor 2, the gene for a novel protein (4933439F18Rik), an acid phosphatase 1 soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for developmentally regulated GTP binding protein 2, the 5' end of the Myo15 gene for myosin XV and four CpG islands, complete sequence Length = 207440 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aaagaaaccgaacttttcac 208 |||||||||||||||||||| Sbjct: 59748 aaagaaaccgaacttttcac 59729
>emb|AL050391.1|HSM800206 Homo sapiens mRNA; cDNA DKFZp586A181 (from clone DKFZp586A181); partial cds Length = 4764 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 atcaacaaaaacaccaattt 528 |||||||||||||||||||| Sbjct: 2995 atcaacaaaaacaccaattt 2976
>gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 atcaacaaaaccaggtcttg 231 |||||||||||||||||||| Sbjct: 108813 atcaacaaaaccaggtcttg 108794
>dbj|AK057200.1| Homo sapiens cDNA FLJ32638 fis, clone SYNOV2000820, weakly similar to Trichoplusia ni transposon IFP2 Length = 2203 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ccatttagaatctgatggaa 370 |||||||||||||||||||| Sbjct: 625 ccatttagaatctgatggaa 644
>gb|AY073447.1| Mus musculus olfactory receptor MOR173-1 gene, complete cds Length = 960 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tgcttctcacctggctgtaa 313 |||||||||||||||||||| Sbjct: 747 tgcttctcacctggctgtaa 766
>gb|AC108056.3| Homo sapiens BAC clone RP11-366I1 from 4, complete sequence Length = 174916 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 204 ttcacaagatcaacaaaaccaggtcttg 231 |||| |||||||||||||||||| |||| Sbjct: 98597 ttcaaaagatcaacaaaaccaggacttg 98570
>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence Length = 188553 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 agaaaggcaataaaagaaac 196 |||||||||||||||||||| Sbjct: 9541 agaaaggcaataaaagaaac 9560
>gb|AC121140.7| Mus musculus chromosome 8, clone RP23-429G12, complete sequence Length = 201440 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 gtttaatttctttacttctttata 63 |||||||||||| ||||||||||| Sbjct: 145369 gtttaatttcttaacttctttata 145392
>emb|BX649332.3| Zebrafish DNA sequence from clone CH211-243P21 in linkage group 4, complete sequence Length = 122049 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 aacacacctcaatattgtataatt 153 ||||||| |||||||||||||||| Sbjct: 87278 aacacacatcaatattgtataatt 87255
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gttggcgagcaatctttgct 444 |||||||||||||||||||| Sbjct: 744865 gttggcgagcaatctttgct 744884
>dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-693N9, complete sequence Length = 172081 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 atcaacaaaaacaccaattt 528 |||||||||||||||||||| Sbjct: 140450 atcaacaaaaacaccaattt 140469
>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete sequences Length = 221535 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtttaatttctttacttctt 59 |||||||||||||||||||| Sbjct: 43432 gtttaatttctttacttctt 43413
>dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-166D19, complete sequence Length = 190360 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gtttaatttctttacttctt 59 |||||||||||||||||||| Sbjct: 125071 gtttaatttctttacttctt 125052 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,519,670 Number of Sequences: 3902068 Number of extensions: 6519670 Number of successful extensions: 122598 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122212 Number of HSP's gapped (non-prelim): 385 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
