>GPDA_CLOTE (Q895X7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 349

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = -3

Query: 580 TLLKGRNAWYGQMLAKGELRLDMGDSIKGKGMI-QGISAVGAFFELXSQPXLSVLHPEEN 404
           T +  RN   G ++ KG   L M ++I+  GM+ +GI A  AF+EL  +  +S+      
Sbjct: 268 TSMHSRNRRAGLLIGKG---LSMEEAIEEVGMVVEGIKACKAFYELKEKLKVSM------ 318

Query: 403 KQVAPAELCPILKRLYRILIKRE 335
                    PI   LYR+L + E
Sbjct: 319 ---------PITDALYRVLFQGE 332

>CTR1_HUMAN (P30825) High-affinity cationic amino acid transporter 1 (CAT-1)|
           (CAT1) (System Y+ basic amino acid transporter)
           (Ecotropic retroviral leukemia receptor homolog) (ERR)
           (Ecotropic retrovirus receptor homolog)
          Length = 629

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = +1

Query: 229 GETGGRMCGSAPSRSSHEGRSWFRPSGLGGCLSPGAPFLSEF--YKASSELGTVQQEPLA 402
           G T GR+C +  ++    G   F P G  G LS  A     F  +   +  G   + P  
Sbjct: 225 GNTSGRLCLNNDTKEGKPGVGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQK 284

Query: 403 CFPLGV 420
             P+G+
Sbjct: 285 AIPVGI 290

>PININ_MOUSE (O35691) Pinin|
          Length = 725

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 374 NSEEAL*NSDKKGAPGERHP-PSPEGRNHERPS*EDRDGAEPHILPPVSPREAVTSAALC 198
           NS+E    S++K    E+ P P PE     +P  +    ++PH  P   P+  + S  LC
Sbjct: 449 NSQEVEKESEEKEEKEEKEPEPQPEPVAQPQPPPQPLPQSQPHSQPHSQPQPVLQSQPLC 508

>PHO85_DEBHA (Q6BRY2) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 330

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 589 TYVTLLKGRNAWYGQMLAKGELRLD 515
           TY T+ KGRN   GQ++A  E+ LD
Sbjct: 18  TYATVYKGRNRTNGQLVALKEINLD 42

>PHO85_YARLI (Q6C7U8) Negative regulator of the PHO system (EC 2.7.11.22)|
           (Serine/threonine-protein kinase PHO85)
          Length = 294

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 589 TYVTLLKGRNAWYGQMLAKGELRLD 515
           TY T+ KGRN   GQ++A  E+ LD
Sbjct: 17  TYATVYKGRNRTTGQLVALKEINLD 41

>CYSW_SYNP7 (P27370) Sulfate transport system permease protein cysW|
          Length = 286

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 604 PLLADTYVTLLKGRNAWYGQMLAKGELRL 518
           P++A   + LL GRN W G +L   ++++
Sbjct: 117 PVVAGLMIVLLYGRNGWLGPLLESNDIKI 145

>KAP3_BOVIN (P31322) cAMP-dependent protein kinase type II-beta regulatory|
           subunit
          Length = 417

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 265 SRSSHEGRSW--FRPSGLGGCLSPGAPFLSEFYKASSELGTVQQEPLA 402
           +R  HEGR+W     +G GG  S G  F  E   + SE G  ++E  A
Sbjct: 48  ARFGHEGRTWGDAGAAGGGGTPSKGVNFAEEPRHSDSENGEEEEEEAA 95

>HUT1_CRYNE (Q5K915) UDP-galactose transporter homolog 1|
          Length = 412

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 60  HRGPNFQTHKPADLKPGDAFAQPIVM 137
           H  P+ Q H P+D  PGD F  P+ +
Sbjct: 35  HPHPHQQPHSPSDPPPGDKFPSPLFL 60

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 338  GAPGERHPPSPEGRNHER--PS*EDRDGAEPHILPP 237
            G  GER PP P G   E+  P  E R+GA+  + PP
Sbjct: 929  GPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPP 964

>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = -2

Query: 353  NSDKKGAPGERHPPSPEGRNHERPS*EDRDG--------AEPHILPPVSPR 225
            N    GAPGER    P+GR       + RDG         EP +LPP  P+
Sbjct: 1423 NDGPVGAPGERGFTGPKGR-------DGRDGTPGLPGQKGEPGMLPPPGPK 1466

>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 344 KKGAPGERHPPSPEGRNHERPS*EDRDGAEPH 249
           ++GAPG+  PP   G   ER +  +  GA PH
Sbjct: 563 ERGAPGDFGPPGSAGTRGERGAPGESGGAGPH 594


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,465,815
Number of Sequences: 219361
Number of extensions: 2225920
Number of successful extensions: 6472
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6462
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)