ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18o10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463690.1| Oryza sativa (japonica cultivar-group), predic... 424 e-115
2dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 74 6e-10
6gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 ... 70 1e-08
7gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC... 70 1e-08
8gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
10dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
11dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
12gb|AY110218.1| Zea mays CL6853_1 mRNA sequence 58 4e-05
13ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehyd... 52 0.002
14ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate de... 52 0.002
15ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehyd... 52 0.002
16gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphat... 52 0.002
17gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphat... 52 0.002
18gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map... 52 0.002
19emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
20emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-... 52 0.002
21dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RI... 46 0.14
22emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chr... 46 0.14
23gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
24emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chro... 44 0.55
25gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.2
26dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.2
27gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosom... 40 8.5
28ref|NM_190938.1| Oryza sativa (japonica cultivar-group), predic... 40 8.5
29ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU0... 40 8.5
30ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.5
31emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 i... 40 8.5
32ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
33ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
34ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
35gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosom... 40 8.5
36emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chr... 40 8.5
37emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC... 40 8.5
38gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, co... 40 8.5
39gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, com... 40 8.5
40gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, com... 40 8.5
41gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complet... 40 8.5
42emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chr... 40 8.5
43emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, co... 40 8.5
44gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 8.5
45dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
46gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 8.5
47dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
48gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430... 40 8.5
49gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603... 40 8.5
50emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chr... 40 8.5 
>ref|XM_463690.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1371

 Score =  424 bits (214), Expect = e-115
 Identities = 347/392 (88%)
 Strand = Plus / Minus

                                                                        
Query: 228  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 287
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1358 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1299

                                                                        
Query: 288  ttcatggtttcgtccctcagggcttggaggatgtctctcaccgggagctccctttttatc 347
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1298 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1239

                                                                        
Query: 348  agaattctataaagcctcttcagaattgggcacagttcagcaggagccacttgcttgttt 407
            || |||||||| ||||||||||  || ||||||||||||||||| || |||||||| |||
Sbjct: 1238 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1179

                                                                        
Query: 408  tcctctgggtgtagaacacttaanctgggttgactgancagctcaaaaaatgcaccaaca 467
            |||||||||||| | |||||||| |||||||||||||  |||||||||||||||||||||
Sbjct: 1178 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1119

                                                                        
Query: 468  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 527
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1118 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1059

                                                                        
Query: 528  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 587
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1058 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 999

                                            
Query: 588  gtatcagccagcagagggccggcaagtttctc 619
            |||||||||||||||||||| |||||||||||
Sbjct: 998  gtatcagccagcagagggccagcaagtttctc 967
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>dbj|AK068569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E21, full
            insert sequence
          Length = 2080

 Score =  424 bits (214), Expect = e-115
 Identities = 347/392 (88%)
 Strand = Plus / Minus

                                                                        
Query: 228  aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 287
            |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 1841 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 1782

                                                                        
Query: 288  ttcatggtttcgtccctcagggcttggaggatgtctctcaccgggagctccctttttatc 347
            ||||||||||| || ||||||||||| || || |||||   || ||||||||||||||| 
Sbjct: 1781 ttcatggtttcatctctcagggcttgcagaatatctcttgtcgagagctccctttttatt 1722

                                                                        
Query: 348  agaattctataaagcctcttcagaattgggcacagttcagcaggagccacttgcttgttt 407
            || |||||||| ||||||||||  || ||||||||||||||||| || |||||||| |||
Sbjct: 1721 agtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaacttgcttattt 1662

                                                                        
Query: 408  tcctctgggtgtagaacacttaanctgggttgactgancagctcaaaaaatgcaccaaca 467
            |||||||||||| | |||||||| |||||||||||||  |||||||||||||||||||||
Sbjct: 1661 tcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaatgcaccaaca 1602

                                                                        
Query: 468  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 527
            ||||| |||||||||||||||||||| || ||||| ||||| ||||| ||  | || |||
Sbjct: 1601 gcagagataccctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagt 1542

                                                                        
Query: 528  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 587
            ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1541 tctcccttcgctagcatttgcccataccacgcattgcgacctttcaggagagtaacataa 1482

                                            
Query: 588  gtatcagccagcagagggccggcaagtttctc 619
            |||||||||||||||||||| |||||||||||
Sbjct: 1481 gtatcagccagcagagggccagcaagtttctc 1450
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  178 bits (90), Expect = 1e-41
 Identities = 129/142 (90%)
 Strand = Plus / Minus

                                                                            
Query: 478      cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 537
                |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 41241157 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 41241098

                                                                            
Query: 538      ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
                ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 41241097 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatcagcca 41241038

                                      
Query: 598      gcagagggccggcaagtttctc 619
                |||||||||| |||||||||||
Sbjct: 41241037 gcagagggccagcaagtttctc 41241016



 Score =  170 bits (86), Expect = 4e-39
 Identities = 129/144 (89%)
 Strand = Plus / Minus

                                                                            
Query: 338      cctttttatcagaattctataaagcctcttcagaattgggcacagttcagcaggagccac 397
                ||||||||| || |||||||| ||||||||||  || ||||||||||||||||| || ||
Sbjct: 41241436 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 41241377

                                                                            
Query: 398      ttgcttgttttcctctgggtgtagaacacttaanctgggttgactgancagctcaaaaaa 457
                |||||| ||||||||||||||| | |||||||| |||||||||||||  |||||||||||
Sbjct: 41241376 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 41241317

                                        
Query: 458      tgcaccaacagcagaaataccctg 481
                ||||||||||||||| ||||||||
Sbjct: 41241316 tgcaccaacagcagagataccctg 41241293



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 228      aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 287
                |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 41242014 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 41241955

                                          
Query: 288      ttcatggtttcgtccctcagggcttg 313
                ||||||||||| || |||||||||||
Sbjct: 41241954 ttcatggtttcatctctcagggcttg 41241929



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 546      tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
                ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 33946815 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 33946866
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>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1150F11
          Length = 130355

 Score =  178 bits (90), Expect = 1e-41
 Identities = 129/142 (90%)
 Strand = Plus / Minus

                                                                         
Query: 478   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 537
             |||||||||||||||| || ||||| ||||| ||||| ||  | || |||||||||||||
Sbjct: 58072 cctgaatcatccccttccccttgatgctgtcgcccatgtcagggctcagttctcccttcg 58013

                                                                         
Query: 538   ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
             ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 58012 ctagcatttgcccataccacgcattgcgacctttcaggagagtaacataagtatcagcca 57953

                                   
Query: 598   gcagagggccggcaagtttctc 619
             |||||||||| |||||||||||
Sbjct: 57952 gcagagggccagcaagtttctc 57931



 Score =  170 bits (86), Expect = 4e-39
 Identities = 129/144 (89%)
 Strand = Plus / Minus

                                                                         
Query: 338   cctttttatcagaattctataaagcctcttcagaattgggcacagttcagcaggagccac 397
             ||||||||| || |||||||| ||||||||||  || ||||||||||||||||| || ||
Sbjct: 58351 cctttttattagtattctatagagcctcttcaagatcgggcacagttcagcaggtgcaac 58292

                                                                         
Query: 398   ttgcttgttttcctctgggtgtagaacacttaanctgggttgactgancagctcaaaaaa 457
             |||||| ||||||||||||||| | |||||||| |||||||||||||  |||||||||||
Sbjct: 58291 ttgcttattttcctctgggtgttgcacacttaagctgggttgactgagaagctcaaaaaa 58232

                                     
Query: 458   tgcaccaacagcagaaataccctg 481
             ||||||||||||||| ||||||||
Sbjct: 58231 tgcaccaacagcagagataccctg 58208



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 228   aggagagacgggcggtagaatgtgtggctctgcgccatctcgatcctctcacgagggtcg 287
             |||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 58929 aggagagatgggcggtagaatgcatggctttgcgccatctcaatcctttcacgaggatca 58870

                                       
Query: 288   ttcatggtttcgtccctcagggcttg 313
             ||||||||||| || |||||||||||
Sbjct: 58869 ttcatggtttcatctctcagggcttg 58844
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>ref|NM_111648.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT3G07690 mRNA, complete cds
          Length = 1811

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 127/157 (80%)
 Strand = Plus / Minus

                                                                        
Query: 468  gcagaaataccctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagt 527
            |||||||  ||||||||||| ||||| |||||||| ||||||||||| || || || |||
Sbjct: 1239 gcagaaaccccctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagt 1180

                                                                        
Query: 528  tctcccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataa 587
            ||||| || || ||  | || || ||||| ||||| |||||||| || |  |||||||| 
Sbjct: 1179 tctccttttgcaagtttctggccgtaccacgcattacgacctttcagtaatgttacatag 1120

                                                 
Query: 588  gtatcagccagcagagggccggcaagtttctctggct 624
            ||||| || |||| ||| || || |||||||||||||
Sbjct: 1119 gtatccgcaagcaaaggcccagcgagtttctctggct 1083
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>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
             sequence
          Length = 79296

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 119/147 (80%)
 Strand = Plus / Minus

                                                                         
Query: 478   cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 537
             |||||||||| ||||| |||||||| ||||||||||| || || || |||||||| || |
Sbjct: 44656 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctccttttg 44597

                                                                         
Query: 538   ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
             | ||  | || || ||||| ||||| |||||||| || |  |||||||| ||||| || |
Sbjct: 44596 caagtttctggccgtaccacgcattacgacctttcagtaatgttacataggtatccgcaa 44537

                                        
Query: 598   gcagagggccggcaagtttctctggct 624
             ||| ||| || || |||||||||||||
Sbjct: 44536 gcaaaggcccagcgagtttctctggct 44510
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>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
            complete sequence
          Length = 121054

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 119/147 (80%)
 Strand = Plus / Minus

                                                                        
Query: 478  cctgaatcatcccctttcctttgatactgtcacccatatcgagcctgagttctcccttcg 537
            |||||||||| ||||| |||||||| ||||||||||| || || || |||||||| || |
Sbjct: 9690 cctgaatcattcccttgcctttgatgctgtcacccatttcaaggctaagttctccttttg 9631

                                                                        
Query: 538  ctagcatttgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
            | ||  | || || ||||| ||||| |||||||| || |  |||||||| ||||| || |
Sbjct: 9630 caagtttctggccgtaccacgcattacgacctttcagtaatgttacataggtatccgcaa 9571

                                       
Query: 598  gcagagggccggcaagtttctctggct 624
            ||| ||| || || |||||||||||||
Sbjct: 9570 gcaaaggcccagcgagtttctctggct 9544
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>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
              complete sequence
          Length = 121466

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                          
Query: 546    tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 605
              ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 101453 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 101394

                            
Query: 606    ccggcaagtttctc 619
              ||||||||||||||
Sbjct: 101393 ccggcaagtttctc 101380
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                            
Query: 546      tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 605
                ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 24215215 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 24215156

                              
Query: 606      ccggcaagtttctc 619
                ||||||||||||||
Sbjct: 24215155 ccggcaagtttctc 24215142



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 390     ggagccacttgcttgttttcctctgg 415
               ||||||||||||||||||| ||||||
Sbjct: 6797081 ggagccacttgcttgttttactctgg 6797056
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>dbj|AK101484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G24, full
            insert sequence
          Length = 2029

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 546  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 605
            ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 1507 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 1448

                          
Query: 606  ccggcaagtttctc 619
            ||||||||||||||
Sbjct: 1447 ccggcaagtttctc 1434
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>dbj|AK066880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A13, full
            insert sequence
          Length = 2858

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 546  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagccagcagaggg 605
            ||||||||||||||||| |||||||| || || |||||||| ||||| || |  | ||| 
Sbjct: 2098 tgcccataccatgcattacgacctttcagcagtgttacataggtatcggctaataaaggc 2039

                          
Query: 606  ccggcaagtttctc 619
            ||||||||||||||
Sbjct: 2038 ccggcaagtttctc 2025
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>gb|AY110218.1| Zea mays CL6853_1 mRNA sequence
          Length = 1098

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                       
Query: 447 agctcaaaaaatgcaccaacagcagaaataccctgaatcatcccctttcctttgatactg 506
           |||||| |||| ||| |||| ||||| | |||||||||  |||| |||||||| ||||||
Sbjct: 462 agctcataaaacgcatcaactgcagagacaccctgaatggtcccttttcctttaatactg 521

                                                                       
Query: 507 tcacccatatcgagcctgagttctcccttcgctagcatttgcccataccatgcattgcga 566
           |||||||| || |   | | ||| || || |||| | | ||||||||||||||||| |||
Sbjct: 522 tcacccatttctaatgtcaattcacctttagctaacttctgcccataccatgcattacga 581

                
Query: 567 ccttt 571
           |||||
Sbjct: 582 ccttt 586
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>ref|NM_129717.3| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.1 mRNA, complete
            cds
          Length = 2712

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1228 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1169

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1168 tcagctagcaaaggccctgcaagtttctcaggct 1135
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>ref|NM_001036448.1| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.3 mRNA, complete
            cds
          Length = 2771

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1324 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1265

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1264 tcagctagcaaaggccctgcaagtttctcaggct 1231
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>ref|NM_180021.2| Arabidopsis thaliana glycerol-3-phosphate dehydrogenase (NAD+)
            AT2G41540 transcript variant AT2G41540.2 mRNA, complete
            cds
          Length = 3028

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1544 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1485

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1484 tcagctagcaaaggccctgcaagtttctcaggct 1451
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>gb|AY091247.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 1420

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1073 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1014

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1013 tcagctagcaaaggccctgcaagtttctcaggct 980
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>gb|AY063920.1| Arabidopsis thaliana putative glycerol-3-phosphate dehydrogenase
            (At2g41540) mRNA, complete cds
          Length = 2023

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1482 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1423

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1422 tcagctagcaaaggccctgcaagtttctcaggct 1389
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>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete
             sequence
          Length = 91979

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                         
Query: 531   cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
             ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 28943 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 28884

                                               
Query: 591   tcagccagcagagggccggcaagtttctctggct 624
             ||||| |||| ||| || ||||||||||| ||||
Sbjct: 28883 tcagctagcaaaggccctgcaagtttctcaggct 28850
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>emb|BX820067.1|CNS0AAG2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS70ZB08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1819

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1258 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1199

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1198 tcagctagcaaaggccctgcaagtttctcaggct 1165
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>emb|AJ347019.1|ATH347019 Arabidopsis thaliana mRNA for glycerol-3-phosphate dehydrogenase
            (gpdhc gene)
          Length = 1708

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                        
Query: 531  cccttcgctagcatttgcccataccatgcattgcgaccttttaggagagttacataagta 590
            ||||| || |||||||| || ||||||||||| || |||||||  |  || |||||||| 
Sbjct: 1228 ccctttgccagcatttgaccgtaccatgcattacgtccttttaataaggtcacataagtg 1169

                                              
Query: 591  tcagccagcagagggccggcaagtttctctggct 624
            ||||| |||| ||| || ||||||||||| ||||
Sbjct: 1168 tcagctagcaaaggccctgcaagtttctcaggct 1135
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>dbj|AK047637.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030004B14 product:inferred:
            myelin basic protein expression factor 2, repressor, full
            insert sequence
          Length = 4367

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 477  ccctgaatcatcccctttccttt 499
            |||||||||||||||||||||||
Sbjct: 3384 ccctgaatcatcccctttccttt 3406
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>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete
              sequence
          Length = 167573

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 477    ccctgaatcatcccctttccttt 499
              |||||||||||||||||||||||
Sbjct: 156674 ccctgaatcatcccctttccttt 156652
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 390   ggagccacttgcttgttttcctctgg 415
             ||||||||||||||||||| ||||||
Sbjct: 28035 ggagccacttgcttgttttactctgg 28010
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>emb|AL359292.12| Human DNA sequence from clone RP3-448K1 on chromosome 6 Contains the
            5' end of the AIM1 gene for absent in melanoma 1 and two
            CpG islands, complete sequence
          Length = 53905

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  ttttcctctgggtgtagaacacttaa 430
            |||||||||||||||||| |||||||
Sbjct: 6959 ttttcctctgggtgtagatcacttaa 6934
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 298     cgtccctcagggcttggaggatgtc 322
               ||||| |||||||||||||||||||
Sbjct: 5313421 cgtccttcagggcttggaggatgtc 5313445
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 298     cgtccctcagggcttggaggatgtc 322
               ||||| |||||||||||||||||||
Sbjct: 5283435 cgtccttcagggcttggaggatgtc 5283459
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>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete
             sequence
          Length = 199086

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 576   agagttacataagtatcagc 595
             ||||||||||||||||||||
Sbjct: 67445 agagttacataagtatcagc 67426
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>ref|NM_190938.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 546  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
            ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 1055 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 1004
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>ref|XM_323660.1| Neurospora crassa OR74A predicted protein (NCU04321.1) partial mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  agccgaggtcacggcttccc 226
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>ref|XM_955874.1| Neurospora crassa OR74A hypothetical protein (NCU04321.1) partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  agccgaggtcacggcttccc 226
            ||||||||||||||||||||
Sbjct: 1212 agccgaggtcacggcttccc 1231
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>emb|BX927107.9| Zebrafish DNA sequence from clone CH211-281H20 in linkage group 7,
            complete sequence
          Length = 135772

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tccaaatttccaaacacaca 87
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>ref|XM_810831.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508739.30) partial mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 451 caaaaaatgcaccaacagca 470
           ||||||||||||||||||||
Sbjct: 207 caaaaaatgcaccaacagca 188
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>ref|XM_810833.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508739.50) partial mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  caaaaaatgcaccaacagca 470
            ||||||||||||||||||||
Sbjct: 1590 caaaaaatgcaccaacagca 1571
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>ref|XM_797493.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509135.9) partial mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 451  caaaaaatgcaccaacagca 470
            ||||||||||||||||||||
Sbjct: 1584 caaaaaatgcaccaacagca 1565
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>gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosome 14, complete
             sequence
          Length = 188421

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 64    ggggtccaaatttccaaacacacaagcc 91
             |||| |||||| ||||||||||||||||
Sbjct: 62668 ggggaccaaatatccaaacacacaagcc 62695
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>emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chromosome 10, complete
              sequence
          Length = 163861

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agctcaaaaaatgcaccaac 466
              ||||||||||||||||||||
Sbjct: 136041 agctcaaaaaatgcaccaac 136022
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>emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC contig B7H23
          Length = 114377

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   agccgaggtcacggcttccc 226
             ||||||||||||||||||||
Sbjct: 71870 agccgaggtcacggcttccc 71889
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>gb|AC113190.8| Homo sapiens chromosome 15, clone RP11-186H10, complete sequence
          Length = 161765

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    cacagttcagcaggagccac 397
              ||||||||||||||||||||
Sbjct: 155034 cacagttcagcaggagccac 155053
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>gb|AC112706.2| Homo sapiens chromosome 19 clone CTD-3195E18, complete sequence
          Length = 65069

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   gccacttgcttgttttcctc 412
             ||||||||||||||||||||
Sbjct: 59660 gccacttgcttgttttcctc 59679
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>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence
          Length = 167417

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 478   cctgaatcatcccctttcct 497
             ||||||||||||||||||||
Sbjct: 31174 cctgaatcatcccctttcct 31155
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>gb|AC092074.3| Homo sapiens chromosome 19 clone X200282, complete sequence
          Length = 38986

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   gccacttgcttgttttcctc 412
             ||||||||||||||||||||
Sbjct: 34791 gccacttgcttgttttcctc 34810
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>emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chromosome 2, complete
              sequence
          Length = 241914

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    cagggcttggaggatgtctctcac 328
              ||||||||||||||||| ||||||
Sbjct: 187491 cagggcttggaggatgtttctcac 187468
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>emb|BX323808.7| Zebrafish DNA sequence from clone DKEY-117N4, complete sequence
          Length = 152686

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tccaaatttccaaacacaca 87
            ||||||||||||||||||||
Sbjct: 3644 tccaaatttccaaacacaca 3663
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    agccacttgcttgttttcct 411
              ||||||||||||||||||||
Sbjct: 107381 agccacttgcttgttttcct 107362
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 546   tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
             ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 78258 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 78309
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    agccacttgcttgttttcct 411
              ||||||||||||||||||||
Sbjct: 104734 agccacttgcttgttttcct 104753
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>dbj|AK073318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025P14, full
            insert sequence
          Length = 1898

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 546  tgcccataccatgcattgcgaccttttaggagagttacataagtatcagcca 597
            ||||||||||||||||| ||||| || || |  || |||||||| |||||||
Sbjct: 1311 tgcccataccatgcattacgacccttcagcaatgtgacataagtgtcagcca 1260
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>gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430i19, complete sequence
          Length = 118741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   cacagttcagcaggagccac 397
             ||||||||||||||||||||
Sbjct: 98818 cacagttcagcaggagccac 98799
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>gb|AC005379.1|AC005379 Homo sapiens chromosome 19, cosmid R32603, complete sequence
          Length = 45617

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 393  gccacttgcttgttttcctc 412
            ||||||||||||||||||||
Sbjct: 1171 gccacttgcttgttttcctc 1190
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>emb|AL845447.3| Mouse DNA sequence from clone RP23-133L20 on chromosome X, complete
             sequence
          Length = 105525

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tttacaatctaatcatgtac 199
             ||||||||||||||||||||
Sbjct: 36032 tttacaatctaatcatgtac 36051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,668,583
Number of Sequences: 3902068
Number of extensions: 4668583
Number of successful extensions: 89024
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88870
Number of HSP's gapped (non-prelim): 144
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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